View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18243_low_37 (Length: 439)

Name: NF18243_low_37
Description: NF18243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18243_low_37
NF18243_low_37
[»] chr2 (36 HSPs)
chr2 (116-256)||(44613137-44613280)
chr2 (111-213)||(28392994-28393096)
chr2 (188-272)||(41120624-41120708)
chr2 (190-276)||(14201292-14201378)
chr2 (188-270)||(33030903-33030985)
chr2 (188-272)||(33031351-33031435)
chr2 (299-376)||(44613008-44613086)
chr2 (188-269)||(25666342-25666423)
chr2 (188-265)||(30784517-30784593)
chr2 (189-269)||(35498890-35498970)
chr2 (188-269)||(36512307-36512387)
chr2 (188-276)||(10357648-10357736)
chr2 (188-360)||(14200839-14201010)
chr2 (188-272)||(31435920-31436004)
chr2 (188-272)||(42274174-42274257)
chr2 (190-272)||(33832452-33832534)
chr2 (314-383)||(13027442-13027511)
chr2 (191-276)||(13027770-13027855)
chr2 (188-269)||(13371870-13371951)
chr2 (188-269)||(25100467-25100548)
chr2 (189-269)||(4327936-4328016)
chr2 (189-277)||(20720872-20720960)
chr2 (311-383)||(42274298-42274370)
chr2 (190-265)||(44286563-44286638)
chr2 (188-267)||(40364761-40364840)
chr2 (188-269)||(31771198-31771279)
chr2 (188-269)||(31771657-31771737)
chr2 (188-269)||(33831999-33832080)
chr2 (188-269)||(34073897-34073978)
chr2 (188-257)||(35498452-35498521)
chr2 (18-51)||(44652138-44652171)
chr2 (189-265)||(7439563-7439639)
chr2 (311-379)||(10357545-10357613)
chr2 (188-272)||(19176644-19176728)
chr2 (188-216)||(21010712-21010740)
chr2 (189-265)||(30749427-30749503)
[»] scaffold0024 (2 HSPs)
scaffold0024 (188-276)||(47726-47814)
scaffold0024 (196-276)||(32846-32926)
[»] chr5 (54 HSPs)
chr5 (188-276)||(10674524-10674612)
chr5 (188-272)||(8404269-8404353)
chr5 (188-272)||(42877938-42878022)
chr5 (188-272)||(17742663-17742747)
chr5 (183-272)||(17742211-17742300)
chr5 (188-269)||(28456469-28456550)
chr5 (188-269)||(30698556-30698637)
chr5 (189-269)||(37103370-37103450)
chr5 (193-276)||(30733836-30733919)
chr5 (188-270)||(42853058-42853140)
chr5 (182-272)||(8337178-8337268)
chr5 (188-272)||(8404726-8404811)
chr5 (203-269)||(27280492-27280558)
chr5 (188-269)||(4461838-4461919)
chr5 (188-264)||(21837283-21837359)
chr5 (192-269)||(22023399-22023476)
chr5 (188-265)||(30394425-30394502)
chr5 (188-269)||(36876192-36876273)
chr5 (188-269)||(41193309-41193390)
chr5 (188-272)||(42877490-42877572)
chr5 (189-269)||(9687407-9687487)
chr5 (188-256)||(34010274-34010342)
chr5 (188-272)||(40158147-40158231)
chr5 (182-269)||(621496-621583)
chr5 (188-219)||(8313092-8313123)
chr5 (188-255)||(8336724-8336791)
chr5 (189-276)||(36875743-36875830)
chr5 (195-265)||(2005368-2005438)
chr5 (190-268)||(3548227-3548303)
chr5 (188-254)||(4462456-4462522)
chr5 (313-383)||(5597869-5597939)
chr5 (195-257)||(43210972-43211034)
chr5 (195-276)||(3407214-3407295)
chr5 (188-269)||(4463098-4463179)
chr5 (188-265)||(8313551-8313628)
chr5 (188-269)||(10463621-10463702)
chr5 (195-276)||(19332351-19332432)
chr5 (188-276)||(27280063-27280151)
chr5 (188-269)||(27307702-27307783)
chr5 (338-383)||(30733948-30733993)
chr5 (182-219)||(33894212-33894249)
chr5 (188-216)||(4591307-4591335)
chr5 (188-216)||(6516318-6516346)
chr5 (188-216)||(7002178-7002206)
chr5 (188-216)||(7411505-7411533)
chr5 (311-379)||(8337073-8337140)
chr5 (188-216)||(11374971-11374999)
chr5 (188-216)||(26019841-26019869)
chr5 (188-216)||(28767207-28767235)
chr5 (188-216)||(33686457-33686485)
chr5 (188-216)||(34728511-34728539)
chr5 (188-236)||(39058582-39058630)
chr5 (188-216)||(42661345-42661373)
chr5 (188-216)||(43390493-43390521)
[»] chr6 (37 HSPs)
chr6 (188-269)||(17697264-17697345)
chr6 (188-269)||(844447-844530)
chr6 (188-269)||(30492604-30492685)
chr6 (191-268)||(861235-861312)
chr6 (193-269)||(28476099-28476175)
chr6 (189-265)||(33744537-33744613)
chr6 (229-272)||(33744992-33745035)
chr6 (189-267)||(3375631-3375708)
chr6 (188-269)||(5974183-5974264)
chr6 (191-269)||(30660664-30660742)
chr6 (188-269)||(938726-938807)
chr6 (188-264)||(939180-939256)
chr6 (188-269)||(10915645-10915726)
chr6 (188-269)||(16736527-16736608)
chr6 (188-269)||(22732330-22732410)
chr6 (330-382)||(861578-861630)
chr6 (189-265)||(5087068-5087144)
chr6 (189-269)||(15720938-15721018)
chr6 (188-219)||(26356920-26356951)
chr6 (191-265)||(30493052-30493126)
chr6 (188-269)||(861692-861773)
chr6 (188-269)||(2087321-2087402)
chr6 (195-276)||(3913148-3913229)
chr6 (195-276)||(3914745-3914826)
chr6 (195-276)||(5086746-5086827)
chr6 (192-269)||(8710178-8710255)
chr6 (188-256)||(20898325-20898393)
chr6 (188-269)||(26356410-26356491)
chr6 (311-383)||(1821205-1821277)
chr6 (188-276)||(5078880-5078968)
chr6 (311-379)||(12481985-12482053)
chr6 (188-268)||(14256478-14256558)
chr6 (188-216)||(17544869-17544897)
chr6 (188-216)||(17545345-17545373)
chr6 (188-272)||(20510374-20510458)
chr6 (191-266)||(29691790-29691865)
chr6 (188-216)||(33599904-33599932)
[»] chr7 (51 HSPs)
chr7 (188-269)||(43597359-43597440)
chr7 (189-265)||(38599313-38599389)
chr7 (188-272)||(47792182-47792266)
chr7 (189-276)||(1260023-1260110)
chr7 (332-382)||(21109566-21109616)
chr7 (188-269)||(7238451-7238532)
chr7 (188-269)||(9633043-9633124)
chr7 (191-276)||(12908565-12908650)
chr7 (188-269)||(28924832-28924913)
chr7 (189-269)||(6331235-6331315)
chr7 (188-268)||(35481966-35482046)
chr7 (188-272)||(38598849-38598933)
chr7 (331-382)||(43574264-43574315)
chr7 (189-268)||(44081287-44081366)
chr7 (191-269)||(14990426-14990504)
chr7 (191-269)||(15420037-15420115)
chr7 (188-266)||(44080840-44080918)
chr7 (188-269)||(7238909-7238990)
chr7 (188-269)||(10620395-10620476)
chr7 (188-272)||(6588569-6588653)
chr7 (188-276)||(10463171-10463259)
chr7 (188-272)||(22378333-22378417)
chr7 (190-273)||(1544803-1544886)
chr7 (190-269)||(4883946-4884025)
chr7 (188-270)||(6589287-6589369)
chr7 (189-264)||(28924381-28924455)
chr7 (191-257)||(12932901-12932967)
chr7 (189-239)||(15492890-15492940)
chr7 (188-269)||(18058888-18058969)
chr7 (183-216)||(3143441-3143474)
chr7 (195-276)||(8832597-8832678)
chr7 (188-257)||(11396834-11396903)
chr7 (188-269)||(14990878-14990959)
chr7 (188-269)||(15420489-15420570)
chr7 (188-269)||(27727100-27727181)
chr7 (188-269)||(27728090-27728171)
chr7 (188-217)||(30050920-30050949)
chr7 (188-257)||(35482400-35482469)
chr7 (195-276)||(37107568-37107649)
chr7 (195-276)||(38595319-38595400)
chr7 (195-276)||(42974608-42974689)
chr7 (179-216)||(45020959-45020996)
chr7 (188-216)||(2688123-2688151)
chr7 (188-216)||(3232417-3232445)
chr7 (188-216)||(26253642-26253670)
chr7 (311-383)||(29155959-29156031)
chr7 (188-216)||(29189637-29189665)
chr7 (188-216)||(30903654-30903682)
chr7 (188-216)||(31716717-31716745)
chr7 (188-216)||(43469620-43469648)
chr7 (188-216)||(47303339-47303367)
[»] chr1 (46 HSPs)
chr1 (191-276)||(48410476-48410561)
chr1 (188-272)||(21794669-21794753)
chr1 (188-268)||(13083326-13083406)
chr1 (189-269)||(30719819-30719899)
chr1 (189-272)||(26805367-26805450)
chr1 (189-276)||(29231208-29231295)
chr1 (188-265)||(35188509-35188586)
chr1 (314-363)||(1297102-1297151)
chr1 (188-269)||(13501544-13501625)
chr1 (191-272)||(35531123-35531204)
chr1 (314-383)||(37707833-37707901)
chr1 (195-276)||(51338351-51338432)
chr1 (188-269)||(51561221-51561302)
chr1 (189-272)||(26805821-26805904)
chr1 (188-269)||(42971838-42971915)
chr1 (188-270)||(42972302-42972384)
chr1 (188-263)||(46517412-46517487)
chr1 (191-270)||(47008961-47009040)
chr1 (313-383)||(25137075-25137145)
chr1 (195-276)||(25351845-25351926)
chr1 (182-216)||(31682863-31682897)
chr1 (195-257)||(51841347-51841409)
chr1 (188-257)||(2058959-2059028)
chr1 (195-276)||(12897415-12897496)
chr1 (314-379)||(13501434-13501499)
chr1 (195-276)||(27550683-27550764)
chr1 (188-265)||(31024391-31024468)
chr1 (188-265)||(31400101-31400178)
chr1 (188-272)||(33707244-33707328)
chr1 (195-276)||(49767575-49767656)
chr1 (195-276)||(51840106-51840187)
chr1 (188-216)||(14422621-14422649)
chr1 (188-268)||(19791121-19791201)
chr1 (188-216)||(23799939-23799967)
chr1 (180-216)||(30926494-30926530)
chr1 (188-216)||(33523820-33523848)
chr1 (188-216)||(35428794-35428822)
chr1 (188-272)||(35530669-35530753)
chr1 (188-216)||(35864312-35864340)
chr1 (188-216)||(36042322-36042350)
chr1 (188-216)||(38163823-38163851)
chr1 (188-268)||(43505107-43505187)
chr1 (189-269)||(46517047-46517127)
chr1 (188-216)||(46947445-46947473)
chr1 (188-276)||(48410003-48410091)
chr1 (188-216)||(50873915-50873943)
[»] chr8 (54 HSPs)
chr8 (188-272)||(37967870-37967954)
chr8 (188-269)||(8784915-8784996)
chr8 (188-265)||(31185812-31185889)
chr8 (188-272)||(37967415-37967499)
chr8 (188-272)||(33322867-33322951)
chr8 (188-270)||(35370020-35370102)
chr8 (188-269)||(41590213-41590294)
chr8 (190-272)||(44265330-44265412)
chr8 (182-272)||(44265782-44265872)
chr8 (188-269)||(2827147-2827228)
chr8 (188-269)||(5250721-5250802)
chr8 (192-269)||(38706773-38706850)
chr8 (188-276)||(5250263-5250351)
chr8 (191-263)||(17498435-17498507)
chr8 (188-272)||(25102288-25102371)
chr8 (190-272)||(17842799-17842881)
chr8 (188-269)||(8784458-8784539)
chr8 (188-265)||(36126599-36126676)
chr8 (188-269)||(547339-547420)
chr8 (188-269)||(6590146-6590227)
chr8 (188-272)||(33322413-33322497)
chr8 (188-276)||(36909602-36909691)
chr8 (188-268)||(10409478-10409558)
chr8 (188-272)||(24451364-24451448)
chr8 (188-272)||(41590665-41590749)
chr8 (189-257)||(42950226-42950294)
chr8 (191-269)||(21159724-21159802)
chr8 (188-267)||(38706316-38706395)
chr8 (191-264)||(12469541-12469615)
chr8 (188-218)||(32988952-32988982)
chr8 (188-269)||(36471155-36471236)
chr8 (188-269)||(14121811-14121892)
chr8 (182-219)||(14122126-14122163)
chr8 (188-269)||(17498823-17498904)
chr8 (191-276)||(27000663-27000748)
chr8 (188-265)||(28755510-28755587)
chr8 (195-276)||(30133852-30133933)
chr8 (195-276)||(44893744-44893825)
chr8 (191-267)||(5696245-5696320)
chr8 (188-216)||(5728681-5728709)
chr8 (204-276)||(5765605-5765677)
chr8 (192-272)||(6590600-6590680)
chr8 (188-216)||(11170185-11170213)
chr8 (311-379)||(12469427-12469495)
chr8 (188-216)||(14395779-14395807)
chr8 (188-216)||(19295137-19295165)
chr8 (188-268)||(21160113-21160193)
chr8 (311-379)||(23483572-23483640)
chr8 (188-216)||(27343740-27343768)
chr8 (311-379)||(30658450-30658518)
chr8 (189-265)||(30806214-30806290)
chr8 (188-216)||(35778686-35778714)
chr8 (311-383)||(36063431-36063503)
chr8 (188-216)||(36102133-36102161)
[»] scaffold0014 (1 HSPs)
scaffold0014 (188-274)||(123467-123552)
[»] chr3 (49 HSPs)
chr3 (191-265)||(54268732-54268806)
chr3 (188-269)||(44809169-44809250)
chr3 (188-276)||(53377598-53377686)
chr3 (188-265)||(27492657-27492734)
chr3 (188-269)||(44808714-44808795)
chr3 (332-382)||(45406701-45406751)
chr3 (188-269)||(53517659-53517740)
chr3 (190-383)||(4017074-4017266)
chr3 (189-276)||(19601432-19601519)
chr3 (188-267)||(38173784-38173863)
chr3 (191-269)||(19601890-19601968)
chr3 (191-269)||(38174241-38174319)
chr3 (195-276)||(52701050-52701131)
chr3 (188-269)||(14525127-14525208)
chr3 (188-276)||(34995421-34995509)
chr3 (195-276)||(52701985-52702066)
chr3 (191-272)||(53396980-53397061)
chr3 (189-272)||(23917212-23917295)
chr3 (188-272)||(27492196-27492280)
chr3 (188-256)||(29348158-29348226)
chr3 (311-383)||(45419782-45419854)
chr3 (188-272)||(53518113-53518197)
chr3 (229-272)||(46294974-46295017)
chr3 (195-276)||(8576228-8576309)
chr3 (188-218)||(11045793-11045823)
chr3 (210-276)||(16056273-16056339)
chr3 (188-218)||(26200238-26200268)
chr3 (188-269)||(29348611-29348692)
chr3 (182-216)||(41187710-41187744)
chr3 (295-361)||(48809865-48809931)
chr3 (191-272)||(9018357-9018438)
chr3 (188-264)||(23917663-23917739)
chr3 (195-276)||(33475359-33475440)
chr3 (188-269)||(40762476-40762557)
chr3 (195-276)||(41928163-41928244)
chr3 (188-273)||(44288601-44288686)
chr3 (188-265)||(46295397-46295474)
chr3 (189-218)||(54269227-54269256)
chr3 (188-216)||(17380273-17380301)
chr3 (188-216)||(19158853-19158881)
chr3 (188-216)||(33805958-33805986)
chr3 (112-176)||(36803619-36803683)
chr3 (188-216)||(40852767-40852795)
chr3 (188-216)||(48180832-48180860)
chr3 (188-216)||(49083316-49083344)
chr3 (188-216)||(49492149-49492177)
chr3 (188-268)||(54185649-54185729)
chr3 (188-216)||(54851834-54851862)
chr3 (188-216)||(55378743-55378771)
[»] scaffold0562 (2 HSPs)
scaffold0562 (188-269)||(3739-3820)
scaffold0562 (188-253)||(4338-4403)
[»] chr4 (59 HSPs)
chr4 (188-269)||(3872920-3873001)
chr4 (188-269)||(47463298-47463379)
chr4 (188-276)||(52947637-52947725)
chr4 (189-272)||(14579058-14579141)
chr4 (189-267)||(33177754-33177832)
chr4 (180-265)||(44290009-44290095)
chr4 (313-383)||(47839468-47839538)
chr4 (188-269)||(52948093-52948174)
chr4 (188-269)||(13604122-13604203)
chr4 (188-269)||(22068437-22068518)
chr4 (188-269)||(33177296-33177377)
chr4 (189-272)||(7491027-7491110)
chr4 (188-268)||(20650727-20650807)
chr4 (188-274)||(38499170-38499256)
chr4 (189-256)||(51395958-51396025)
chr4 (332-382)||(2179399-2179449)
chr4 (188-269)||(4849975-4850056)
chr4 (313-383)||(30210174-30210244)
chr4 (188-253)||(3873519-3873584)
chr4 (189-269)||(10085822-10085902)
chr4 (188-269)||(19523052-19523133)
chr4 (188-269)||(22067980-22068061)
chr4 (334-382)||(10085513-10085561)
chr4 (189-269)||(38114544-38114624)
chr4 (188-276)||(47379501-47379589)
chr4 (189-269)||(51395489-51395569)
chr4 (188-219)||(5093012-5093043)
chr4 (188-255)||(7617662-7617729)
chr4 (229-272)||(44289600-44289643)
chr4 (188-219)||(45756311-45756342)
chr4 (229-272)||(48082366-48082409)
chr4 (188-269)||(7499081-7499162)
chr4 (317-379)||(10321925-10321987)
chr4 (191-269)||(28448268-28448346)
chr4 (180-218)||(43938323-43938361)
chr4 (188-218)||(51956350-51956380)
chr4 (191-269)||(55283447-55283525)
chr4 (195-276)||(13508756-13508837)
chr4 (183-216)||(26649725-26649758)
chr4 (191-272)||(31470847-31470928)
chr4 (191-276)||(38499620-38499705)
chr4 (189-218)||(39669612-39669641)
chr4 (191-268)||(42973016-42973093)
chr4 (195-276)||(44451975-44452056)
chr4 (188-269)||(47309773-47309854)
chr4 (187-272)||(48219763-48219847)
chr4 (188-216)||(5497125-5497153)
chr4 (312-380)||(6818021-6818089)
chr4 (188-272)||(11670963-11671047)
chr4 (188-216)||(19037389-19037417)
chr4 (188-216)||(23454349-23454377)
chr4 (311-379)||(28448388-28448456)
chr4 (189-272)||(28448715-28448799)
chr4 (188-216)||(29771541-29771569)
chr4 (191-268)||(30331611-30331690)
chr4 (188-216)||(34373588-34373616)
chr4 (188-216)||(35119918-35119946)
chr4 (188-272)||(53569036-53569120)
chr4 (188-216)||(54789097-54789125)
[»] scaffold0005 (1 HSPs)
scaffold0005 (189-272)||(238234-238317)
[»] scaffold0445 (1 HSPs)
scaffold0445 (188-269)||(5792-5873)
[»] scaffold0734 (2 HSPs)
scaffold0734 (188-272)||(3477-3561)
scaffold0734 (189-264)||(2727-2802)
[»] scaffold1191 (1 HSPs)
scaffold1191 (187-269)||(1007-1088)
[»] scaffold0245 (1 HSPs)
scaffold0245 (314-363)||(25012-25061)
[»] scaffold0097 (1 HSPs)
scaffold0097 (189-277)||(24710-24798)
[»] scaffold0036 (1 HSPs)
scaffold0036 (191-269)||(17255-17333)
[»] scaffold0586 (1 HSPs)
scaffold0586 (188-218)||(5974-6004)
[»] scaffold0514 (1 HSPs)
scaffold0514 (189-267)||(6509-6587)
[»] scaffold0066 (1 HSPs)
scaffold0066 (186-216)||(16828-16858)
[»] scaffold0640 (1 HSPs)
scaffold0640 (188-265)||(3766-3843)
[»] scaffold0118 (1 HSPs)
scaffold0118 (188-216)||(15010-15038)
[»] scaffold0012 (1 HSPs)
scaffold0012 (188-216)||(48742-48770)


Alignment Details
Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 44613280 - 44613137
Alignment:
Q  116 atgtcattgttaagactttaaaacatcactggct---taaatacttaactatttaatctttaatctaataattacgggttaaatatgtttttgatcccta 212  Q
    |||||||||||||||||||||||||||| |  ||   |||||||||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||    
T  44613280 atgtcattgttaagactttaaaacatcattaactaattaaatacttaactatttaatctttaattgaataattaagggttaaatatgtttttgattccta 44613181  T
Q  213 taaaataagaactttataagtttagtctttgtttaattttaata 256  Q
    |||||||| |||||||| |||||||||  |  ||||||||||||    
T  44613180 taaaataaaaactttatgagtttagtccgtacttaattttaata 44613137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 28393096 - 28392994
Alignment:
Q  111 atgacatgtcattgttaagactttaaaacatcactggcttaaatacttaactatttaatctttaatctaataattacgggttaaatatgtttttgatccc 210  Q
    ||||||||||||||||||||||||||| |||||  | |||||||| ||||||||||||| |||||||||| |||||  |||| ||| |||||||| ||||    
T  28393096 atgacatgtcattgttaagactttaaagcatcatcgacttaaatatttaactatttaatatttaatctaacaattaaaggtttaatgtgtttttggtccc 28392997  T
Q  211 tat 213  Q
    |||    
T  28392996 tat 28392994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 41120624 - 41120708
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||||||||||||||||  | || || ||||||||||| ||  ||||||||||||| ||||||||||||||    
T  41120624 gggttaaatatgtttttgatccctataaaattgggaccttttaagtttagtccttacttaattttaatagtttttttagtcctta 41120708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 14201378 - 14201292
Alignment:
Q  190 gttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||  |||||||||||| || ||||| ||| ||||||| ||| ||||||||||||| |||||||||| |||||||    
T  14201378 gttaaatatgtttttagtccctataaaatcaggactttctaattttagtccttgcttaattttaataggttttttagtctttataaa 14201292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 33030903 - 33030985
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcct 270  Q
    ||||||||||||||||||||| |||||||||  | |  || |||||||||||||| |||||||||||||| ||||||||||||    
T  33030903 gggttaaatatgtttttgatctctataaaattgggatcttttaagtttagtctttatttaattttaatagtttttttagtcct 33030985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 33031435 - 33031351
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||||| |||||||||| || |  || ||||||||||| ||  ||||||||||||| ||||||||||||||    
T  33031435 gggttaaatatgtttttgatacctataaaattaggaacttctaagtttagtcattacttaattttaataggttttttagtcctta 33031351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 376
Target Start/End: Complemental strand, 44613086 - 44613008
Alignment:
Q  299 gtctcaaataatacaaaatttgtttaactaactttaaactctta-aatatttgaataattttttgcatacatgtttaga 376  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||  ||| || || |||||| |||||||||||||    
T  44613086 gtctcaaataatacaaaatttgtttaactaaccttaaactcttataagtttttaacaactttttgtatacatgtttaga 44613008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 25666423 - 25666342
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||| ||||||| | || || |||||||| || || |||||||||||||| |||||||||||    
T  25666423 gggttaaatatgtttttggtccctgtaaaatagggaccttttaagtttaatccttatttaattttaatagattttttagtcc 25666342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 30784593 - 30784517
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    |||||||||||||||||| |||||||||| | |||||||| |||||| |||||||  ||||||||||||| |||||||    
T  30784593 gggttaaatatgtttttggtccctataaattgagaacttt-taagttcagtctttacttaattttaataggtttttta 30784517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 35498970 - 35498890
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||| |||||||||||||||||||||| | |||||||| ||||||||||| ||  ||||||||||||| |||||||||||    
T  35498970 ggttaattatgtttttgatccctataaaattgagaacttt-taagtttagtccttacttaattttaataggttttttagtcc 35498890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 36512387 - 36512307
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  || |||| |||||||||||||| ||||||||||| || | |||||||||    
T  36512387 gggttaaatatgtttttggtccctataaaattggaccttt-taagtttagtctttatttaattttaacagttcttttagtcc 36512307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 10357736 - 10357648
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||||  ||||||||||||  |||  || ||||||||||| ||  || |||||||||| ||||||||||||||||||    
T  10357736 gggttaaatatgttttttgtccctataaaattggaaacttctaagtttagtccttacttgattttaatagattttttagtccttataaa 10357648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 360
Target Start/End: Original strand, 14200839 - 14201010
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaatttgtgtttg 286  Q
    ||||||||||||| |||| ||||||||||||  | | |||| ||||||||||| ||  ||||||||||||||||||||||||| || |||    | |||     
T  14200839 gggttaaatatgtatttggtccctataaaattgacatcttt-taagtttagtccttacttaattttaatagcttttttagtccctacaaa-aaatattta 14200936  T
Q  287 cacgcaagtttagtctcaaataatacaaaatttgtttaactaactttaaactcttaaatatttgaataattttt 360  Q
    || | || |||||||||   ||| ||||| ||||||||| || | |||||||||||||| |||||| |||||||    
T  14200937 caggtaattttagtctctgctaaaacaaagtttgtttaattatccttaaactcttaaatttttgaacaattttt 14201010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 31435920 - 31436004
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||  ||||||||||||  ||| |||| ||||||||||||||  ||||||||||||| | ||||||||||||    
T  31435920 gggttaaatatgtttttagtccctataaaattgagaccttt-taagtttagtctttacttaattttaatagttcttttagtcctta 31436004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 42274174 - 42274257
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||| |||||||||||| || |  || ||||||||||| ||  |||| |||||||| ||||||||||||||    
T  42274174 gggttaaatatgtttttggtccctataaaattaggaacttctaagtttagtccttacttaa-tttaataggttttttagtcctta 42274257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 33832534 - 33832452
Alignment:
Q  190 gttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||| |||||| ||||||||||||  | ||  | ||||||||||||| | ||||||||||||| | ||||||||||||    
T  33832534 gttaaatatatttttggtccctataaaattgggaccatttaagtttagtcttcgcttaattttaatagttcttttagtcctta 33832452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 383
Target Start/End: Original strand, 13027442 - 13027511
Alignment:
Q  314 aaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
    |||||||||||| || | |||||||||||||| |||||| ||||||| | | ||| ||||||||||||||    
T  13027442 aaatttgtttaattatccttaaactcttaaatttttgaacaatttttcggagacacgtttagaacattat 13027511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 13027855 - 13027770
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||||||| ||||||||||||    || || ||||||||||| ||  ||||||||||| | ||||||||||| ||||||    
T  13027855 ttaaatatgtttttggtccctataaaattgagacattttaagtttagtccttacttaattttaattgtttttttagtccctataaa 13027770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 13371870 - 13371951
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||| ||||||||||| ||||||||||||  |||  || |||||||| || ||  ||||||||||||| |||||||||||    
T  13371870 gggttatatatgtttttggtccctataaaattggaaacttttaagtttaatccttacttaattttaataggttttttagtcc 13371951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 25100467 - 25100548
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  | || ||  |||| ||||| ||  ||||||||||||||| |||||||||    
T  25100467 gggttaaatatgtttttggtccctataaaattgggacctttcaagtctagtccttacttaattttaatagctattttagtcc 25100548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 4328016 - 4327936
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||  ||||| ||||||  | || || ||||||||||| ||  ||||||||||||| |||||||||||    
T  4328016 ggttaaatatgtttttagtccctgtaaaattgggaccttttaagtttagtccttacttaattttaatagtttttttagtcc 4327936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 20720960 - 20720872
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaat 277  Q
    ||||||||||||||||  ||||| ||||||   | | || ||||||||||| || |||||||||||||| | |||||||||||| ||||    
T  20720960 ggttaaatatgtttttagtccctgtaaaattgaagcattttaagtttagtccttatttaattttaatagttgttttagtccttacaaat 20720872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 383
Target Start/End: Original strand, 42274298 - 42274370
Alignment:
Q  311 acaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
    ||||||||||||||| || | |||||||||||||| ||||||  |||||||  | ||| ||||||||||||||    
T  42274298 acaaaatttgtttaattatccttaaactcttaaatttttgaacgatttttttaagacaagtttagaacattat 42274370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 44286563 - 44286638
Alignment:
Q  190 gttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||||  ||  ||||||||||||| |||||||    
T  44286563 gttaaatatgtttttgatccttataaaattaggaacttt-taagtttagttcttaattaattttaataggtttttta 44286638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 40364761 - 40364840
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagt 267  Q
    |||||||||||| ||||| ||||||||||||  |||  || || |||||||| ||  ||||||||||||| |||||||||    
T  40364761 gggttaaatatgcttttggtccctataaaattggaaacttttaggtttagtccttacttaattttaataggttttttagt 40364840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 31771198 - 31771279
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||| | ||| |||| |||| |||||| ||  ||||||||||||| | |||||||||    
T  31771198 gggttaaatatgtttttggtccctataaaattgagaccttt-taagcttagtccttacttaattttaatagttattttagtcc 31771279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 31771737 - 31771657
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||| | |||||||||||  || |  || ||||||||||| ||  ||||||||||||| |||||||||||    
T  31771737 gggttaaatatgttttcggtccctataaaacgaggaacttctaagtttagtcctt-attaattttaatagtttttttagtcc 31771657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 33831999 - 33832080
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||| |||||||||| || |||||||||  | |  || ||||||||||| ||  ||||||||||||| |||||||||||    
T  33831999 gggttaattatgtttttggtctctataaaattgggaacttctaagtttagtccttacttaattttaataggttttttagtcc 33832080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 34073978 - 34073897
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||| |||||  ||||||||||||  |||| || ||| ||||||| ||  ||||||||||||| | |||||||||    
T  34073978 gggttaaatatatttttagtccctataaaattggaaccttttaaatttagtccttacttaattttaatagttcttttagtcc 34073897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 35498452 - 35498521
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatag 257  Q
    |||||||||||||||||  | ||||||||||  | || || ||||||||||||||  |||||||||||||    
T  35498452 gggttaaatatgtttttagttcctataaaattgggaccttttaagtttagtctttacttaattttaatag 35498521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 44652138 - 44652171
Alignment:
Q  18 taaactaatttaccccgacgttcaataacaatca 51  Q
    ||||||||||||||||||||| ||||||||||||    
T  44652138 taaactaatttaccccgacgtccaataacaatca 44652171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 7439639 - 7439563
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    |||||||| |||||||| ||||||||||||  |||  ||||||||||| || ||  ||||||| ||||| |||||||    
T  7439639 ggttaaatttgtttttggtccctataaaattggaaacttataagtttaatccttacttaatttaaataggtttttta 7439563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 10357613 - 10357545
Alignment:
Q  311 acaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaaca 379  Q
    ||||| ||||||||| || |||||||||||||||| ||||||  |||||||  | ||| ||||||||||    
T  10357613 acaaagtttgtttaattatctttaaactcttaaatttttgaacgattttttttagacaagtttagaaca 10357545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 19176644 - 19176728
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||  |||||||| |||  | | ||  ||||||||||  ||  ||||||||||||| ||||||||||||||    
T  19176644 gggttaaatatgtttttagtccctatagaattgggaattcttaagtttagttattacttaattttaataggttttttagtcctta 19176728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 21010712 - 21010740
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  21010712 gggttaaatatgtttttgatccctataaa 21010740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 30749427 - 30749503
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    ||||||||||||||||  ||| ||||||||| |||| ||  ||||||| || ||  ||||||||||||| |||||||    
T  30749427 ggttaaatatgtttttagtccttataaaataggaacctttcaagtttaatccttacttaattttaataggtttttta 30749503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 47726 - 47814
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||||||||||||||||||||| |  |||  |||||||||||||| ||  ||||||||||||||||||||||||| ||||||    
T  47726 gggttaaatatgtttttgatccctataaattttgaaacttataagtttagtccttacttaattttaatagcttttttagtccctataaa 47814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 32846 - 32926
Alignment:
Q  196 tatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||| || ||||||| |  |||  || |||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  32846 tatgtttttggtctctataaattttgaaacttctaagtttagtctttatttaattttaataacttttttagtccctataaa 32926  T

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Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 10674524 - 10674612
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||||| ||||||||||||  | || |||||||||||||||||  ||||||||||||| | ||||||||||||||||    
T  10674524 gggttaaatatgtttttggtccctataaaattgggaccttataagtttagtctttacttaattttaatagttcttttagtccttataaa 10674612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 8404269 - 8404353
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||||||||||||||| || ||||||| ||||||||||| ||  ||||||||||||| ||||||||||||||    
T  8404269 gggttaaatatgtttttgatccctataaaattaggaacttt-taagtttagtccttacttaattttaataggttttttagtcctta 8404353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 42878022 - 42877938
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||| ||||||||||||  ||| |||| ||||||||||| ||  ||||||||||||| ||||||||||||||    
T  42878022 gggttaaatatgtttttggtccctataaaattgagaccttt-taagtttagtccttacttaattttaatagtttttttagtcctta 42877938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 17742747 - 17742663
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||| | ||||||||||  | |  || ||||||||||||||  ||||||||||||| ||||||||||||||    
T  17742747 gggttaaatatgtttttggttcctataaaattgggaacttctaagtttagtctttacttaattttaataggttttttagtcctta 17742663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 17742211 - 17742300
Alignment:
Q  183 attacgggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||| |||||||||||||||||| ||||||||||||  | || || ||||||||||  ||  ||||||||||||| ||||||| ||||||    
T  17742211 attatgggttaaatatgtttttggtccctataaaattgggaccttttaagtttagttcttacttaattttaatagtttttttattcctta 17742300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 28456469 - 28456550
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| |||||||||||| || || || |||||||||||  |  ||||||||||||| | |||||||||    
T  28456469 gggttaaatatgtttttggtccctataaaattaggaccttttaagtttagtcaatacttaattttaatagttattttagtcc 28456550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 30698556 - 30698637
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  |||  || ||||||||||| ||  |||||||||||| | ||||||||||    
T  30698556 gggttaaatatgtttttggtccctataaaattggaaacttctaagtttagtccttacttaattttaataacatttttagtcc 30698637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 37103450 - 37103370
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||||| ||||||||||  |||  || |||||||| || ||  ||||||||||||| |||||||||||    
T  37103450 ggttaaatatgtttttgattcctataaaattggaaacttctaagtttaatccttacttaattttaataggttttttagtcc 37103370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 276
Target Start/End: Original strand, 30733836 - 30733919
Alignment:
Q  193 aaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||||| ||||||||||||  |||  || ||||||||||| ||  |||||||||||| | |||||||||||| ||||    
T  30733836 aaatatgtttttggtccctataaaattggaaacttctaagtttagtcgttacttaattttaataacatttttagtccttctaaa 30733919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 42853140 - 42853058
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcct 270  Q
    |||||||||||||||||||||||| ||||| | ||| |||| || |||||||| ||  ||||||||||||| ||||||||||||    
T  42853140 gggttaaatatgtttttgatccctgtaaaattgagatcttt-taggtttagtccttacttaattttaatagtttttttagtcct 42853058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 8337268 - 8337178
Alignment:
Q  182 aattacgggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||| || ||||||| ||||||  ||||||||| ||| | ||||| |||||||| ||||| |||||||||||||  || |||||||||||    
T  8337268 aattaaggattaaataggtttttagtccctataagatagggactttttaagtttaatctttatttaattttaataaattgtttagtcctta 8337178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 8404811 - 8404726
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatag-cttttttagtcctta 272  Q
    |||||||||||||||||||| ||||||||| | ||| |||| |||||||| |||||  |||||||||||||  ||||||||||||||    
T  8404811 gggttaaatatgtttttgattcctataaaattgagaccttt-taagtttaatctttacttaattttaatagttttttttagtcctta 8404726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 27280558 - 27280492
Alignment:
Q  203 ttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||  |||  || ||||||||||| || ||||||||||||||| ||||||||||    
T  27280558 ttgatccctataaaattggaaacttctaagtttagtccttatttaattttaatagcatttttagtcc 27280492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 4461838 - 4461919
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  | |  || || |||||||| ||  ||||| |||||||||||||||||||    
T  4461838 gggttaaatatgtttttggtccctataaaattgggaacttctatgtttagtccttacttaatattaatagcttttttagtcc 4461919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 21837359 - 21837283
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagctttttt 264  Q
    |||||||||||||||||| |||||||| |||| ||||| || ||| ||||||| ||  ||||||||||||||||||||    
T  21837359 gggttaaatatgtttttggtccctatagaatatagaac-ttctaaatttagtccttacttaattttaatagctttttt 21837283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 22023476 - 22023399
Alignment:
Q  192 taaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||| ||||||||||||  | || || ||||||||||| ||  ||||||||||||| | |||||||||    
T  22023476 taaatatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaatagttcttttagtcc 22023399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 30394502 - 30394425
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    |||||||||||||||||| || |||||||||    || || ||||||||||| ||  |||||||||||||||||||||    
T  30394502 gggttaaatatgtttttggtctctataaaattgcgacattctaagtttagtccttacttaattttaatagctttttta 30394425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 36876273 - 36876192
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  |||  || ||||||||||  ||  |||||||||||||| |||| |||||    
T  36876273 gggttaaatatgtttttggtccctataaaattggaaacttctaagtttagttcttacttaattttaatagcattttgagtcc 36876192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 41193390 - 41193309
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||||||||||||||||  | |  ||  ||||||| || || |||||||||||||| | |||||||||    
T  41193390 gggttaaatatgtttttgatccctataaaattgggatatttcaagtttattcgttatttaattttaatagttcttttagtcc 41193309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 42877490 - 42877572
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||| |||| |||||||  |||  |  ||||||||||| ||  ||||||||||||| ||||||||||||||    
T  42877490 gggttaaatatgtttttggtcccaataaaattggaaaat--taagtttagtcattacttaattttaatagattttttagtcctta 42877572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 9687407 - 9687487
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||| ||||||||||||  | |  || |||||||| || ||  ||||||||||||| |||||||||||    
T  9687407 ggttaaatatgtttttggtccctataaaattggcaacttctaagtttaatccttacttaattttaataggttttttagtcc 9687487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 34010342 - 34010274
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaata 256  Q
    |||||||||||||||||| ||||||||||||  | |  || ||||||||||| ||| ||||||||||||    
T  34010342 gggttaaatatgtttttggtccctataaaattgggaacttctaagtttagtccttgcttaattttaata 34010274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 40158147 - 40158231
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||  ||||||||||||  | || || ||||||||||| ||  ||||||||||||| | ||||||| ||||    
T  40158147 gggttaaatatgtttttagtccctataaaattgggaccttttaagtttagtccttacttaattttaatagttcttttagttctta 40158231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 621496 - 621583
Alignment:
Q  182 aattacgggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||| ||||||||||||||||| |||||||||||||  | |  ||  |||||||||| ||  ||||||||||||  |||||||||||    
T  621496 aattaagggttaaatatgttttttatccctataaaattgggaacttccaagtttagtccttaattaattttaataaattttttagtcc 621583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 219
Target Start/End: Original strand, 8313092 - 8313123
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata 219  Q
    ||||||||||||||||||||||||||||||||    
T  8313092 gggttaaatatgtttttgatccctataaaata 8313123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 8336724 - 8336791
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaat 255  Q
    |||||||||||||||||| ||| ||||||||| |  | || ||||||||||| || ||||||||||||    
T  8336724 gggttaaatatgtttttggtccttataaaataggggccttttaagtttagtccttatttaattttaat 8336791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 36875743 - 36875830
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||||||||| ||||||| |||| |  ||||| |||| ||| || |   |||||||||||||  |||||||||||||||||    
T  36875743 ggttaaatatgtttttggtccctattaaattatgactttctaaggttaatcctcacttaattttaataggctttttagtccttataaa 36875830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 2005438 - 2005368
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    ||||||||||| ||||||||||||    || || ||||||||||| ||  |||||||||||||||||||||    
T  2005438 atatgtttttggtccctataaaattgtgaccttctaagtttagtcgttacttaattttaatagctttttta 2005368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 3548227 - 3548303
Alignment:
Q  190 gttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    |||||||||||||||| ||| |||||| | ||| |||  ||| |||||||||| ||||||||||||| |||||||||||    
T  3548227 gttaaatatgtttttg-tccttataaatttagagcttc-taattttagtctttatttaattttaataacttttttagtc 3548303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 4462456 - 4462522
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaa 254  Q
    |||||||||||||||||| ||||||||||||  | || || ||||||||||| ||  ||||||||||    
T  4462456 gggttaaatatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaa 4462522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 383
Target Start/End: Complemental strand, 5597939 - 5597869
Alignment:
Q  313 aaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
    ||||||||||||| ||  |||||||| |||||| ||| ||| ||||||| ||||| |||||| ||||||||    
T  5597939 aaaatttgtttaattatgtttaaacttttaaattttttaatgattttttacatacttgtttaaaacattat 5597869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 43211034 - 43210972
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatag 257  Q
    ||||||||||||||||||||||||  | || || ||||||||||| ||  |||||||||||||    
T  43211034 atatgtttttgatccctataaaattgggaccttttaagtttagtccttacttaattttaatag 43210972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 3407295 - 3407214
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | || || ||||||||||| ||  |||||||||||||   ||||||||| ||||||    
T  3407295 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaatagtgcttttagtccatataaa 3407214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 4463179 - 4463098
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||  ||||||||||||  | |  || ||||||||||| ||  ||||||||||||| ||||| |||||    
T  4463179 gggttaaatatgtttttagtccctataaaattgggaacttctaagtttagtccttacttaattttaataggtttttcagtcc 4463098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 8313628 - 8313551
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    |||||||||||||||||| ||||||||||||| | || ||  ||||||| || ||  ||||||||||| | |||||||    
T  8313628 gggttaaatatgtttttggtccctataaaatagggacctttcaagtttaatccttacttaattttaattgatttttta 8313551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 10463621 - 10463702
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||| |   |||  |||||||||| ||  ||||||||||| | | |||||||||    
T  10463621 gggttaaatatgtttttggtccctataaaataggggtttttcaagtttagtccttacttaattttaatggttcttttagtcc 10463702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 19332351 - 19332432
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | || || ||||||||||| ||  ||||||||||||   |||||||||| ||||||    
T  19332351 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaataatgtttttagtccatataaa 19332432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 27280063 - 27280151
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaat-aagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| |||||| || ||||||||| ||||  |||| |||||||||| |   ||||||||||||| ||||||||||| ||||||    
T  27280063 gggttaaatatttttttggtctctataaaattaagatattta-aagtttagtcctcccttaattttaataggttttttagtccctataaa 27280151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 27307702 - 27307783
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||| |  | ||  |||||||||| ||  ||||||||||| | | |||||||||    
T  27307702 gggttaaatatgtttttggtccctataaaataggggcctttcaagtttagtccttacttaattttaatggttcttttagtcc 27307783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 383
Target Start/End: Original strand, 30733948 - 30733993
Alignment:
Q  338 tcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
    |||||||| |||||| ||||||||| | ||||||||||||||||||    
T  30733948 tcttaaatttttgaacaattttttggagacatgtttagaacattat 30733993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 33894212 - 33894249
Alignment:
Q  182 aattacgggttaaatatgtttttgatccctataaaata 219  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  33894212 aattaagggttaaatatgttttttatccctataaaata 33894249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 4591335 - 4591307
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  4591335 gggttaaatatgtttttgatccctataaa 4591307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 6516318 - 6516346
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  6516318 gggttaaatatgtttttgatccctataaa 6516346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 7002206 - 7002178
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  7002206 gggttaaatatgtttttgatccctataaa 7002178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 7411533 - 7411505
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  7411533 gggttaaatatgtttttgatccctataaa 7411505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 8337140 - 8337073
Alignment:
Q  311 acaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaaca 379  Q
    ||||| ||||||||| || | |||||||||||||| ||||||| |||||||| | ||| ||||||||||    
T  8337140 acaaagtttgtttaattatccttaaactcttaaatttttgaatgattttttg-agacaagtttagaaca 8337073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 11374971 - 11374999
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  11374971 gggttaaatatgtttttgatccctataaa 11374999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 26019841 - 26019869
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  26019841 gggttaaatatgtttttgatccctataaa 26019869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 28767207 - 28767235
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  28767207 gggttaaatatgtttttgatccctataaa 28767235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 33686457 - 33686485
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  33686457 gggttaaatatgtttttgatccctataaa 33686485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 34728511 - 34728539
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  34728511 gggttaaatatgtttttgatccctataaa 34728539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 39058630 - 39058582
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagttta 236  Q
    ||||||||||||||||| ||||||||||||| | || ||| ||||||||    
T  39058630 gggttaaatatgtttttaatccctataaaatcacaagtttttaagttta 39058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 42661345 - 42661373
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  42661345 gggttaaatatgtttttgatccctataaa 42661373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 43390493 - 43390521
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  43390493 gggttaaatatgtttttgatccctataaa 43390521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 17697264 - 17697345
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  |||||||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  17697264 gggttaaatatgtttttggtccctataaaattgagaacttt-taagtttagtccttgcttaattttaataggttttttagtcc 17697345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 844530 - 844447
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtc--tttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||||||||||||||||| | |  || |||||||||||  ||| ||||||||||||||| ||||||||||    
T  844530 gggttaaatatgtttttgatccctataaaatagggaacttctaagtttagtccttttatttaattttaatagcatttttagtcc 844447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 30492604 - 30492685
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  | ||||| ||||||||||| ||  ||||||||||||| | |||||||||    
T  30492604 gggttaaatatgtttttggtccctataaaattgggactttttaagtttagtccttacttaattttaatagttcttttagtcc 30492685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 861235 - 861312
Alignment:
Q  191 ttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||| ||  |||||||||||||| |||||||||    
T  861235 ttaaatatgtttttaatccctataaaatagggaacttt-taagtttagtccttacttaattttaatagcatttttagtc 861312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 28476099 - 28476175
Alignment:
Q  193 aaatatgtttttgatccctataaaat-aagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||| ||   |||||||||||| |||||||||||    
T  28476099 aaatatgtttttggtccctataaaattaagaactt-ataagtttagtccttacataattttaataggttttttagtcc 28476175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 33744537 - 33744613
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    ||||||||||||||||| ||||||||||||    || || ||||||||||| ||  |||||||||||||||||||||    
T  33744537 ggttaaatatgtttttggtccctataaaattgcgaccttttaagtttagtccttacttaattttaatagctttttta 33744613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 33745035 - 33744992
Alignment:
Q  229 taagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||| |||||||||||||||||||||| ||||||    
T  33745035 taagtttagtctttatttaattttaatagcttttttaatcctta 33744992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 3375708 - 3375631
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagt 267  Q
    |||| |||||||||||| ||| ||||||||  |||  || ||||||||||| || ||||||||||||||||||||||||    
T  3375708 ggttgaatatgtttttggtcc-tataaaatttgaaacttttaagtttagtcattatttaattttaatagcttttttagt 3375631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 5974183 - 5974264
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||| | ||||| || ||||||||||  ||  ||||||||||||| |||||||||||    
T  5974183 gggttaaatatgtttttggtccctataaaattgagaac-ttctaagtttagttcttacttaattttaataggttttttagtcc 5974264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 30660664 - 30660742
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||| ||||||||||||    ||||| ||||||||||| ||| ||||||||||||  | |||||||||    
T  30660664 ttaaatatgtttttggtccctataaaattgagactttttaagtttagtccttgcttaattttaataattcttttagtcc 30660742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 938726 - 938807
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||| ||||||||||||||||||  | ||  | ||||||||||  || |||||||||||||| | |||||||||    
T  938726 gggttaaatatgattttgatccctataaaattgggaccctttaagtttagtgcttttttaattttaatagttcttttagtcc 938807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 939256 - 939180
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagctttttt 264  Q
    |||||||||||||||||| ||| ||||||| | |||||||| ||||||||||| ||  ||||||||||||| ||||||    
T  939256 gggttaaatatgtttttggtccatataaaattgagaacttt-taagtttagtccttacttaattttaatagttttttt 939180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 10915726 - 10915645
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  | |  || |||||||| || ||  ||||||||||||| |||||||||||    
T  10915726 gggttaaatatgtttttggtccctataaaattggcaacttctaagtttaatccttacttaattttaataggttttttagtcc 10915645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 16736527 - 16736608
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||||  ||||||||||| | || || || ||||| || ||  ||||||||||||| |||||||||||    
T  16736527 gggttaaatatgtttttgaatcctataaaatagggaccttttatgtttaatccttacttaattttaataggttttttagtcc 16736608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 22732410 - 22732330
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| |||||| |||||  | || || ||||||||||| ||  ||||||||||||| |||||||||||    
T  22732410 gggttaaatatgtttttg-tccctacaaaattgggaccttttaagtttagtccttacttaattttaataggttttttagtcc 22732330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 861630 - 861578
Alignment:
Q  330 ctttaaactcttaaatatttgaataattttttgcatacatgtttagaacatta 382  Q
    |||||||||||||| | |||||| ||||||||||| |||| ||||||||||||    
T  861630 ctttaaactcttaagtttttgaacaattttttgcagacatatttagaacatta 861578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 5087068 - 5087144
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    ||||||||||||||||| | ||||||||||  |||  || ||||||||||| ||  ||||||||||||| |||||||    
T  5087068 ggttaaatatgtttttggttcctataaaattggaaacttctaagtttagtccttacttaattttaataggtttttta 5087144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 15720938 - 15721018
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||| ||||||||||||| | || ||  ||||||| || ||  ||||||||||||| ||||| |||||    
T  15720938 ggttaaatatgtttttggtccctataaaatagggacctttcaagtttaatccttacttaattttaatagatttttaagtcc 15721018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 219
Target Start/End: Complemental strand, 26356951 - 26356920
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata 219  Q
    ||||||||||||||||||||||||||||||||    
T  26356951 gggttaaatatgtttttgatccctataaaata 26356920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 30493126 - 30493052
Alignment:
Q  191 ttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    ||||||||||||||| ||||||||||| |  ||||||| |||||||| |||||  ||||||||||||| |||||||    
T  30493126 ttaaatatgtttttggtccctataaaattgggaacttt-taagtttattctttacttaattttaataggtttttta 30493052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 861773 - 861692
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||  ||||||||||||    || || ||||||||||| ||  ||||||||||||| | |||||||||    
T  861773 gggttaaatatgtttttagtccctataaaattgtgaccttttaagtttagtccttacttaattttaatagttcttttagtcc 861692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 2087321 - 2087402
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||| |||||| ||||||||||||  | || ||  |||||||||| ||  ||||||||||||| | |||||||||    
T  2087321 gggttaaatatatttttggtccctataaaattgggacctttcaagtttagtccttacttaattttaatagttcttttagtcc 2087402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 3913148 - 3913229
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | |  || ||||||||||| ||  |||||||||||||  |||||||||| ||||||    
T  3913148 atatgtttttggtccctataaaattgggatcttttaagtttagtccttacttaattttaatagtgtttttagtccatataaa 3913229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 3914826 - 3914745
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | ||||| ||||||||||| ||  ||||||||||| |   ||||||||| ||||||    
T  3914826 atatgtttttggtccctataaaattgggactttttaagtttagtccttacttaattttaattgtgcttttagtccatataaa 3914745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 5086827 - 5086746
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | || || ||||||||||| ||  |||||| ||||||  |||||||||| ||||||    
T  5086827 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattataatagtgtttttagtccatataaa 5086746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 8710255 - 8710178
Alignment:
Q  192 taaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||| ||||||||||||  | |  || ||||||||||  ||  ||||||||||||| |||||||||||    
T  8710255 taaatatgtttttggtccctataaaattgggaacttctaagtttagttcttacttaattttaataggttttttagtcc 8710178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 20898393 - 20898325
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaata 256  Q
    |||||||||||||||||  ||||||||||| | ||| |||| ||||||||||||||  ||||||||||||    
T  20898393 gggttaaatatgtttttagtccctataaaattgagaccttt-taagtttagtctttccttaattttaata 20898325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 26356410 - 26356491
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| |||||||||| || | || ||  |||||||||| ||  ||||||||||| | | |||||||||    
T  26356410 gggttaaatatgtttttggtccctataaattagggacctttcaagtttagtccttacttaattttaattgttcttttagtcc 26356491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 383
Target Start/End: Complemental strand, 1821277 - 1821205
Alignment:
Q  311 acaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
    ||||| ||||||||| || |||||||||||||||| ||||||  |||||||  | ||| ||||| ||||||||    
T  1821277 acaaagtttgtttaattatctttaaactcttaaatttttgaacgatttttttgagacaagtttataacattat 1821205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 5078880 - 5078968
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||||  ||||||||||||   | | || |||||||||||  |  ||||||||||||| | ||||||| ||||||||    
T  5078880 gggttaaatatgtttttagtccctataaaatcgaagcattttaagtttagtccatacttaattttaatagttgttttagtacttataaa 5078968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 12482053 - 12481985
Alignment:
Q  311 acaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaaca 379  Q
    ||||||||||||||| || | |||||||||||||| ||||||  |||||||  | ||| ||||||||||    
T  12482053 acaaaatttgtttaattatccttaaactcttaaatttttgaacgattttttttagacaagtttagaaca 12481985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 14256558 - 14256478
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    ||||||| |||||||||| ||||||||||||   ||  || ||||||||||| ||  ||||||||||||| | ||||||||    
T  14256558 gggttaattatgtttttggtccctataaaattgaaagcttttaagtttagtccttacttaattttaatagttcttttagtc 14256478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 17544869 - 17544897
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  17544869 gggttaaatatgtttttgatccctataaa 17544897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 17545373 - 17545345
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  17545373 gggttaaatatgtttttgatccctataaa 17545345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 20510374 - 20510458
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||||| |||| ||||||||||||  | |  || |||||||| || ||  ||||||||||||| | ||||||||||||    
T  20510374 gggttaaatatgtgtttggtccctataaaattgggatcttttaagtttactccttacttaattttaatagttcttttagtcctta 20510458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 29691790 - 29691865
Alignment:
Q  191 ttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttag 266  Q
    ||||||||||||||| || |||||||||  ||||||| |||||||||||| ||   |||||||||||| ||||||||    
T  29691790 ttaaatatgtttttggtctctataaaattgagaactt-ataagtttagtccttacataattttaataggttttttag 29691865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 33599932 - 33599904
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  33599932 gggttaaatatgtttttgatccctataaa 33599904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 43597359 - 43597440
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||||||||||||||||| | || ||  ||||||| |||||  ||||||||||||| |||||||||||    
T  43597359 gggttaaatatgtttttgatccctataaaatagggacctttcaagtttaatctttacttaattttaatagattttttagtcc 43597440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 38599389 - 38599313
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    ||||||||||||||||||| |||||||||| |  || || ||||||||||| ||  |||||||||||||||||||||    
T  38599389 ggttaaatatgtttttgattcctataaaattacgaccttctaagtttagtccttacttaattttaatagctttttta 38599313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 47792266 - 47792182
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||| ||||||||||||  | |  || ||||||||||| ||  ||||||||||||| ||||||||||||||    
T  47792266 gggttaaatatgtttttggtccctataaaattgggaacttctaagtttagtccttacttaattttaataggttttttagtcctta 47792182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 1260023 - 1260110
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||||||||| ||||||||||||  | |  || ||||||||||| ||| ||||||||||| | ||||||||||| ||||||    
T  1260023 ggttaaatatgtttttgttccctataaaattgggatattttaagtttagtccttgcttaattttaattgtttttttagtccctataaa 1260110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 21109616 - 21109566
Alignment:
Q  332 ttaaactcttaaatatttgaataattttttgcatacatgtttagaacatta 382  Q
    |||||||||||||| |||||| |||||||||||||| ||||||||||||||    
T  21109616 ttaaactcttaaatttttgaacaattttttgcatacgtgtttagaacatta 21109566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 7238451 - 7238532
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  | |  || |||||||| || || |||||||||||||| |||||||||||    
T  7238451 gggttaaatatgtttttggtccctataaaatttgcaacttctaagtttaatccttatttaattttaataggttttttagtcc 7238532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 9633043 - 9633124
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| | |||||||||| | ||  | |||||||||||||||  |||||||||||| | ||||||||||    
T  9633043 gggttaaatatgtttttgtttcctataaaattaaaaactaataagtttagtctttacttaattttaataacatttttagtcc 9633124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 276
Target Start/End: Original strand, 12908565 - 12908650
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||||||| ||||||||||||    || || ||||||||||| ||  ||||||||||||| ||||||||||| ||||||    
T  12908565 ttaaatatgtttttggtccctataaaattgagaccttctaagtttagtccttacttaattttaatagtttttttagtccctataaa 12908650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 28924913 - 28924832
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||| |||||||||||||||||||  | |  || |||||||| || ||  |||||||||||||||||||||||||    
T  28924913 gggttaaatatatttttgatccctataaaattgggaacttctaagtttaatccttacttaattttaatagcttttttagtcc 28924832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 6331315 - 6331235
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||| ||||||||||||| | || ||  ||||||| || ||  ||||||||||||| |||||||||||    
T  6331315 ggttaaatatgtttttggtccctataaaatagggacctttcaagtttaatccttacttaattttaatagattttttagtcc 6331235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 35481966 - 35482046
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    |||||| ||||||||||| |||||||||||| || |  || | |||| |||| || |||||||||||||||||||||||||    
T  35481966 gggttatatatgtttttggtccctataaaattaggaacttctgagttcagtccttatttaattttaatagcttttttagtc 35482046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 38598849 - 38598933
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||| |||||||| | |||||| ||||| |  || || ||||||||||| || |||||||||||||||||||||| ||||||    
T  38598849 gggttaattatgttttcggtccctacaaaattacgaccttgtaagtttagtccttatttaattttaatagcttttttaatcctta 38598933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 43574264 - 43574315
Alignment:
Q  331 tttaaactcttaaatatttgaataattttttgcatacatgtttagaacatta 382  Q
    ||||||||||||| | |||||| ||||||||||| |||||||||||||||||    
T  43574264 tttaaactcttaagtttttgaacaattttttgcagacatgtttagaacatta 43574315  T

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Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 44081366 - 44081287
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    |||||||||||||| || ||||||||||||  | |  || |||||||| | ||| |||||||||||||||||||||||||    
T  44081366 ggttaaatatgtttctggtccctataaaattgggaacttctaagtttaatttttatttaattttaatagcttttttagtc 44081287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 14990426 - 14990504
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||||| ||||||||    | ||| ||||||||||| || |||||||||||||| |||| ||||||    
T  14990426 ttaaatatgtttttgatccttataaaattgataatttttaagtttagtccttatttaattttaataggttttatagtcc 14990504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 15420037 - 15420115
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||||| ||||||||    | ||| ||||||||||| || |||||||||||||| |||| ||||||    
T  15420037 ttaaatatgtttttgatccttataaaattgataatttttaagtttagtccttatttaattttaataggttttatagtcc 15420115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 44080840 - 44080918
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttag 266  Q
    ||||||||||||||||| |||||||||||||    || || ||||||||||| || |||||||||||||  ||||||||    
T  44080840 gggttaaatatgtttttaatccctataaaattgagaccttctaagtttagtccttatttaattttaataatttttttag 44080918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 7238990 - 7238909
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| | ||||||||||  |||  || ||||||||||| ||  ||||||||||||| | |||||||||    
T  7238990 gggttaaatatgtttttggttcctataaaattggaatcttttaagtttagtccttacttaattttaatagttcttttagtcc 7238909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 10620395 - 10620476
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||| |||||| ||||||||||||   ||  || ||||||||||| ||  ||||||||||||| |||||||||||    
T  10620395 gggttaaatatctttttggtccctataaaattgaaaacttctaagtttagtccttacttaattttaataggttttttagtcc 10620476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 6588569 - 6588653
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||  ||||||||||||  | || || ||||||||||  ||  ||||||||||||| | ||||||||||||    
T  6588569 gggttaaatatgtttttagtccctataaaattgggaccttttaagtttagttcttacttaattttaatagttcttttagtcctta 6588653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 10463171 - 10463259
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||||  || || ||||||  |||  || ||||||||||| ||  ||||||||||||||||||| ||||| ||||||    
T  10463171 gggttaaatatgtttttagtctctgtaaaatttgaaacttctaagtttagtccttacttaattttaatagctttttcagtccctataaa 10463259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 22378333 - 22378417
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||| |||||| ||| ||||||||||| |  ||  ||||||| || ||  ||||||||||||| ||||||||||||||    
T  22378333 gggttaaatatttttttggtccttataaaataaggatctttcaagtttaatccttacttaattttaatagattttttagtcctta 22378417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 273
Target Start/End: Complemental strand, 1544886 - 1544803
Alignment:
Q  190 gttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttat 273  Q
    |||||||||| ||||||||||| ||||||  | |  |||||||||||||| ||   |||||||||||| | |||||||||||||    
T  1544886 gttaaatatgattttgatccctgtaaaattgggatcttataagtttagtccttacgtaattttaatagttcttttagtccttat 1544803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 4884025 - 4883946
Alignment:
Q  190 gttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||| | || ||  |||||||||| ||  ||||||||||| | | |||||||||    
T  4884025 gttaaatatgtttttgattcctataaaatagggacctttcaagtttagtccttacttaattttaatggttcttttagtcc 4883946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 6589369 - 6589287
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtcct 270  Q
    ||||||| |||||||||| ||| ||||||||  |||||||  ||||||||||| ||  ||||||||||||| ||||||||||||    
T  6589369 gggttaattatgtttttggtccatataaaattgagaacttc-taagtttagtccttacttaattttaataggttttttagtcct 6589287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 28924381 - 28924455
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttt 264  Q
    |||||||||||||||| ||||||||||| | || ||||| ||| ||||||| ||  ||||||||||||| ||||||    
T  28924381 ggttaaatatgtttttaatccctataaattgag-actttttaaatttagtcattacttaattttaatagttttttt 28924455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 12932967 - 12932901
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatag 257  Q
    ||||||||||||||| |||||||||||| |  || || ||||||||||| ||  |||||||||||||    
T  12932967 ttaaatatgtttttggtccctataaaattaagaccttctaagtttagtccttacttaattttaatag 12932901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 15492940 - 15492890
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtc 239  Q
    ||||||||||||||||||||||||||||||  | || || |||||||||||    
T  15492940 ggttaaatatgtttttgatccctataaaattgggaccttttaagtttagtc 15492890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 18058888 - 18058969
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||| ||||| |||| |||||| |||  ||  ||||||||||||| | |||||||||    
T  18058888 gggttaaatatgtttttggtccctataaaattaagatcttt-taagttcagtgcttacttaattttaatagttcttttagtcc 18058969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 3143474 - 3143441
Alignment:
Q  183 attacgggttaaatatgtttttgatccctataaa 216  Q
    |||| |||||||||||||||||||||||||||||    
T  3143474 attaagggttaaatatgtttttgatccctataaa 3143441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 8832597 - 8832678
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | || || ||||||||||| ||  ||||||||||||| | |||| |||| ||||||    
T  8832597 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaatagttcttttggtccatataaa 8832678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 11396834 - 11396903
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatag 257  Q
    ||||||||||| |||||||||| ||||||||  ||| ||| ||||||||||| ||  ||||||| |||||    
T  11396834 gggttaaatatatttttgatccttataaaattggaaatttctaagtttagtccttacttaatttaaatag 11396903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 14990959 - 14990878
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  | || || |||||||| || ||   |||||||||||| | |||||||||    
T  14990959 gggttaaatatgtttttggtccctataaaattgggaccttctaagtttaatccttacctaattttaatagttcttttagtcc 14990878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 15420570 - 15420489
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  | || || |||||||| || ||   |||||||||||| | |||||||||    
T  15420570 gggttaaatatgtttttggtccctataaaattgggaccttctaagtttaatccttacctaattttaatagttcttttagtcc 15420489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 27727100 - 27727181
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  | |  || |||||||| || ||  ||||||||||||| ||||| |||||    
T  27727100 gggttaaatatgtttttggtccctataaaattgggaacttctaagtttactccttacttaattttaataggtttttaagtcc 27727181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 27728171 - 27728090
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||| |||||| ||||||||||||  | || || |||||||| || ||  ||||||||||||| | |||||||||    
T  27728171 gggttaaatatatttttggtccctataaaattgggacgttttaagtttaatccttacttaattttaatagttcttttagtcc 27728090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 30050949 - 30050920
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa 217  Q
    ||||||||||||||||||||||||||||||    
T  30050949 gggttaaatatgtttttgatccctataaaa 30050920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 35482469 - 35482400
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatag 257  Q
    |||||||||||||||||| |||||||||||| || |  || ||| ||||||| ||  |||||||||||||    
T  35482469 gggttaaatatgtttttggtccctataaaattaggatattttaaatttagtcattacttaattttaatag 35482400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 37107568 - 37107649
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | || || ||||||||||| ||  |||||| ||||||  |||||||||| ||||||    
T  37107568 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattataatagtgtttttagtccatataaa 37107649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 38595400 - 38595319
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | | ||| ||||||||||| ||  |||||||||||||   ||||||||| ||||||    
T  38595400 atatgtttttggtccctataaaattgggaatttttaagtttagtccttacttaattttaatagtgcttttagtccatataaa 38595319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 42974689 - 42974608
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||| |||||||||||||  | || || ||||||||||| ||  |||||||||||||  |||||||| | ||||||    
T  42974689 atatgttttttatccctataaaattgggaccttttaagtttagtccttacttaattttaatagtgtttttagttcatataaa 42974608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 45020959 - 45020996
Alignment:
Q  179 aataattacgggttaaatatgtttttgatccctataaa 216  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  45020959 aatatttaagggttaaatatgtttttgatccctataaa 45020996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 2688123 - 2688151
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  2688123 gggttaaatatgtttttgatccctataaa 2688151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 3232445 - 3232417
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  3232445 gggttaaatatgtttttgatccctataaa 3232417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 26253670 - 26253642
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  26253670 gggttaaatatgtttttgatccctataaa 26253642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 383
Target Start/End: Original strand, 29155959 - 29156031
Alignment:
Q  311 acaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
    ||||| ||||||||| || | |||||||||||||| | |||| ||||||||  | ||| ||||||||||||||    
T  29155959 acaaagtttgtttaattatccttaaactcttaaatttatgaacaattttttttaaacaagtttagaacattat 29156031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 29189637 - 29189665
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  29189637 gggttaaatatgtttttgatccctataaa 29189665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 30903682 - 30903654
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  30903682 gggttaaatatgtttttgatccctataaa 30903654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 31716717 - 31716745
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  31716717 gggttaaatatgtttttgatccctataaa 31716745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 43469648 - 43469620
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  43469648 gggttaaatatgtttttgatccctataaa 43469620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 47303367 - 47303339
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  47303367 gggttaaatatgtttttgatccctataaa 47303339  T

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Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 48410561 - 48410476
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||||||| ||||||||||||  |||  || ||||||||||| ||  ||||||||||||||||||||||||| ||||||    
T  48410561 ttaaatatgtttttggtccctataaaatttgaaacttttaagtttagtccttacttaattttaatagcttttttagtccctataaa 48410476  T

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Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 21794753 - 21794669
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||| ||||||||||||  | |  |||||||||||||| ||  ||||||||||||| ||||| ||||||||    
T  21794753 gggttaaatatgtttttggtccctataaaattgggaacttataagtttagtccttacttaattttaataggtttttaagtcctta 21794669  T

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Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 13083326 - 13083406
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    ||||||||||||||||||||| | ||||||| || |||||  |||||||||| |   ||||||||||||| ||||||||||    
T  13083326 gggttaaatatgtttttgatcgccataaaattaggactttcaaagtttagtcctcacttaattttaatagtttttttagtc 13083406  T

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Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 30719899 - 30719819
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||| ||||||||||||||||||| | || ||  ||||| | || || |||||||||||||| |||||||||||    
T  30719899 ggttaaatatgattttgatccctataaaatagggacctttcaagttcaatccttatttaattttaatagattttttagtcc 30719819  T

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Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 26805367 - 26805450
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||||||||| ||||||||||||  | |  || ||||||||||| ||  ||||||||||||| ||||||| ||||||    
T  26805367 ggttaaatatgtttttggtccctataaaattgggaacttctaagtttagtccttacttaattttaataggttttttaatcctta 26805450  T

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Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 29231208 - 29231295
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||||||||  ||||||||||||    || || ||||||||||| ||  ||||||||||||| | ||||||||||||||||    
T  29231208 ggttaaatatgtttttagtccctataaaattgagacattttaagtttagtccttacttaattttaatagttgttttagtccttataaa 29231295  T

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Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 35188586 - 35188509
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaat-aagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    |||||||||||||||||| ||||||||||||  ||||| ||||||||||| || ||  ||||||||| |||||||||||    
T  35188586 gggttaaatatgtttttggtccctataaaatcgagaac-ttataagtttaatccttacttaattttagtagctttttta 35188509  T

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Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 1297151 - 1297102
Alignment:
Q  314 aaatttgtttaactaactttaaactcttaaatatttgaataattttttgc 363  Q
    |||||||||||| ||  ||||||||||||||| |||||||||||||||||    
T  1297151 aaatttgtttaattatgtttaaactcttaaatttttgaataattttttgc 1297102  T

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Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 13501625 - 13501544
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||| |||||| ||| ||||||||||| || ||  |||||||||| ||  ||||||||||| | |||||||||||    
T  13501625 gggttaaatatttttttggtccatataaaataagtacctttcaagtttagtccttacttaattttaatggtttttttagtcc 13501544  T

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Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 35531204 - 35531123
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||||||| ||||||||||||  | |  || ||||||||||| ||  ||||||||||||  ||||||||||||||    
T  35531204 ttaaatatgtttttggtccctataaaattgggaacttctaagtttagtccttacttaattttaataagttttttagtcctta 35531123  T

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Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 383
Target Start/End: Complemental strand, 37707901 - 37707833
Alignment:
Q  314 aaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
    ||||||||||||  | ||||||||| |||||| ||||||| ||||||| || ||||||||||||||||||    
T  37707901 aaatttgtttaatcatctttaaacttttaaatttttgaatgatttttt-caaacatgtttagaacattat 37707833  T

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Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 51338351 - 51338432
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  |||  || ||||||||||| ||  |||||||||||||  |||||||||| ||||||    
T  51338351 atatgtttttggtccctataaaattggaatattttaagtttagtccttacttaattttaatagtgtttttagtccatataaa 51338432  T

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Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 51561221 - 51561302
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||| | || ||  || ||||||| ||| ||||||||||| | | |||||||||    
T  51561221 gggttaaatatgtttttggtccctataaaatagggacctttcaactttagtccttgcttaattttaatggttcttttagtcc 51561302  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 26805904 - 26805821
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||| |||||||||||| | ||| |||| ||||||||||  ||  |||||||||||||  |||||||||||||    
T  26805904 ggttaaatatgttttttatccctataaaattcagaccttt-taagtttagttcttacttaattttaatagtatttttagtcctta 26805821  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 42971838 - 42971915
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||| |||||||||||| ||||||    ||||| |||||||||||    |||||||||||||| |||||||||||    
T  42971838 gggttaaatatatttttgatccctgtaaaattgagactttttaagtttagtc----tttaattttaatagtttttttagtcc 42971915  T

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Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 42972384 - 42972302
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcct 270  Q
    ||||||| |||||||||| ||||||||||| | |||||||| ||||||||||| ||  ||||||||||||  ||||||| ||||    
T  42972384 gggttaattatgtttttggtccctataaaattgagaacttt-taagtttagtccttacttaattttaatatattttttattcct 42972302  T

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Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 46517487 - 46517412
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttt 263  Q
    |||||||||||||||||  ||||||||||||  | || || ||||||||||| ||  ||||||||||||| |||||    
T  46517487 gggttaaatatgtttttcgtccctataaaattgggacattttaagtttagtccttacttaattttaatagtttttt 46517412  T

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Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 47009040 - 47008961
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcct 270  Q
    ||||||||||||||| |||||||||||| || || || ||||||| ||| ||  ||| ||||||||| | ||||||||||    
T  47009040 ttaaatatgtttttggtccctataaaattaggaccttttaagttttgtccttacttacttttaatagttcttttagtcct 47008961  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 383
Target Start/End: Complemental strand, 25137145 - 25137075
Alignment:
Q  313 aaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
    ||||||||||||| ||  |||||| | |||||| ||| ||| ||||||| ||||| |||||||||||||||    
T  25137145 aaaatttgtttaattaggtttaaaattttaaattttttaatgattttttacatacttgtttagaacattat 25137075  T

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Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 25351845 - 25351926
Alignment:
Q  195 atatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||||||||||||||| | ||| |||| ||||||||||| ||  |||||||||||||   ||||||||| ||||||    
T  25351845 atatgtttttgatccctataaaattgagaccttt-taagtttagtccttacttaattttaatagtgcttttagtccatataaa 25351926  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 31682863 - 31682897
Alignment:
Q  182 aattacgggttaaatatgtttttgatccctataaa 216  Q
    ||||| |||||||||||||||||||||||||||||    
T  31682863 aattaagggttaaatatgtttttgatccctataaa 31682897  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 51841409 - 51841347
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatag 257  Q
    ||||||||||||||| ||||||||  |||| || ||||||||||| ||  |||||||||||||    
T  51841409 atatgtttttgatccttataaaattggaaccttttaagtttagtccttacttaattttaatag 51841347  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 2058959 - 2059028
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatag 257  Q
    |||||||||||||||||  ||||||| ||||  | || || ||||||||||| || ||||||||||||||    
T  2058959 gggttaaatatgtttttagtccctatgaaattgggaccttttaagtttagtccttatttaattttaatag 2059028  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 12897496 - 12897415
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||| | ||||||||||||  |||| || ||||||||||| ||  |||||||||||||   ||||||||| ||||||    
T  12897496 atatgttttcggtccctataaaattggaaccttttaagtttagtccttacttaattttaatagtaattttagtccatataaa 12897415  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 379
Target Start/End: Complemental strand, 13501499 - 13501434
Alignment:
Q  314 aaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaaca 379  Q
    |||||||||||| || | |||||||||||||| |||||| ||||||||  | ||| ||||||||||    
T  13501499 aaatttgtttaattatccttaaactcttaaatttttgaacaatttttttgagacaagtttagaaca 13501434  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 27550683 - 27550764
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| |||||||||||| || | ||| ||||||||||| ||  |||||| ||||||  ||||||| || ||||||    
T  27550683 atatgtttttggtccctataaaattaggattttttaagtttagtccttacttaattataatagtatttttagcccatataaa 27550764  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 31024468 - 31024391
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    |||||||||||||||||||||| ||| ||||  | |||||  | |||||||| ||  ||||||||||||| |||||||    
T  31024468 gggttaaatatgtttttgatccttatcaaattgggactttcaatgtttagtccttacttaattttaatagttttttta 31024391  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 265
Target Start/End: Original strand, 31400101 - 31400178
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    ||||||| |||||||| | |||||| |||||    || || ||||||||||| || ||||||||||||||||||||||    
T  31400101 gggttaattatgttttcggtccctacaaaattgcgaccttgtaagtttagtccttatttaattttaatagctttttta 31400178  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 33707244 - 33707328
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||| | ||||||||| | | |||||| |||||||| || ||  ||||||||||||| ||||| ||||||||    
T  33707244 gggttaaatatgtttttggttcctataaaattgaaaacttt-taagtttaatccttacttaattttaatagttttttcagtcctta 33707328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 49767575 - 49767656
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | || || ||||||||||| ||  |||||| ||||||  |||||||||| ||||||    
T  49767575 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattataatagtgtttttagtccatataaa 49767656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 51840106 - 51840187
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||   ||| || ||||||||||| ||  |||||||||||||   ||||||||| ||||||    
T  51840106 atatgtttttggtccctataaaattgaaacattttaagtttagtccttacttaattttaatagtgattttagtccatataaa 51840187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 14422621 - 14422649
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  14422621 gggttaaatatgtttttgatccctataaa 14422649  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 19791121 - 19791201
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    |||||||||||||||||  | ||||||||||  | || || ||||||||||| ||  ||||||||||||| | ||||||||    
T  19791121 gggttaaatatgtttttatttcctataaaattgggaccttttaagtttagtccttacttaattttaatagttcttttagtc 19791201  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 23799939 - 23799967
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  23799939 gggttaaatatgtttttgatccctataaa 23799967  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 30926530 - 30926494
Alignment:
Q  180 ataattacgggttaaatatgtttttgatccctataaa 216  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  30926530 ataattaagggttaaatatgtttttggtccctataaa 30926494  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 33523820 - 33523848
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  33523820 gggttaaatatgtttttgatccctataaa 33523848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 35428794 - 35428822
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  35428794 gggttaaatatgtttttgatccctataaa 35428822  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 35530669 - 35530753
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||| | | ||||  ||||  | || || ||||||||||| ||  ||||||||||||| ||||||||||||||    
T  35530669 gggttaaatatgttttaggttcctacgaaattgggaccttttaagtttagtcattacttaattttaatagtttttttagtcctta 35530753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 35864312 - 35864340
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  35864312 gggttaaatatgtttttgatccctataaa 35864340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 36042322 - 36042350
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  36042322 gggttaaatatgtttttgatccctataaa 36042350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 38163851 - 38163823
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  38163851 gggttaaatatgtttttgatccctataaa 38163823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 43505187 - 43505107
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    ||||||||||||||| || ||| ||||||||  ||| ||| |||||||  || ||  ||||||||||||| ||||||||||    
T  43505187 gggttaaatatgtttctggtccttataaaattggaaatttttaagtttgatccttacttaattttaataggttttttagtc 43505107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 46517047 - 46517127
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||| ||||||||| || || |  || |||||||| || ||  ||||||||||||| | |||||||||    
T  46517047 ggttaaatatgtttttggtccctataagattagcaacttctaagtttaatccttacttaattttaatagatattttagtcc 46517127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 46947473 - 46947445
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  46947473 gggttaaatatgtttttgatccctataaa 46947445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 48410003 - 48410091
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||||| ||||||||||||  | || || ||||||| ||| ||  ||||||||||| |   ||||||||| ||||||    
T  48410003 gggttaaatatgtttttggtccctataaaattgggacattttaagttttgtccttacttaattttaatggtgcttttagtccctataaa 48410091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 50873915 - 50873943
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  50873915 gggttaaatatgtttttgatccctataaa 50873943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 37967954 - 37967870
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||| |||||||||||| || |  || ||||||||||| ||  ||||||||||||| ||||||||||||||    
T  37967954 gggttaaatatgtttttggtccctataaaattaggaacttctaagtttagtccttacttaattttaatagtttttttagtcctta 37967870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 8784996 - 8784915
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||| |||||| || | ||| ||||||||||| ||  ||||||||||||| |||||||||||    
T  8784996 gggttaaatatgtttttggtccctctaaaattaggaatttctaagtttagtccttacttaattttaataggttttttagtcc 8784915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 31185889 - 31185812
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    |||||||||||||||||||||||||||||||    || |||||||||||||| ||  ||||||||||||| |||||||    
T  31185889 gggttaaatatgtttttgatccctataaaattgcgaccttataagtttagtccttacttaattttaatagttttttta 31185812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 37967415 - 37967499
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||  ||||||||||||  ||| |||| ||||||||||||||  ||||||||||||| ||||||||||||||    
T  37967415 gggttaaatatgtttttcgtccctataaaattgagatcttt-taagtttagtctttacttaattttaatagtttttttagtcctta 37967499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 33322951 - 33322867
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||| ||||||||||||| || |||||||||  |||  || ||||||||||| || |||||||||||||| ||||||||||||||    
T  33322951 gggtaaaatatgtttttggtctctataaaattggaaacttctaagtttagtccttatttaattttaataggttttttagtcctta 33322867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 35370102 - 35370020
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcct 270  Q
    |||||||||||||||||  ||||||||||||   ||| || ||||||||||||||  ||||||||||||| | ||||||||||    
T  35370102 gggttaaatatgtttttagtccctataaaatcgaaacattttaagtttagtctttacttaattttaatagttgttttagtcct 35370020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 41590213 - 41590294
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||| |||||||||| ||||||||||||  |||||||| ||||||||||| ||  ||||||||||||| |||||||||||    
T  41590213 gggttaattatgtttttggtccctataaaattgagaacttt-taagtttagtccttacttaattttaataggttttttagtcc 41590294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 44265330 - 44265412
Alignment:
Q  190 gttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||||||||||||||  | || || ||| ||||||||||  ||||||||| ||| | ||||||||||||    
T  44265330 gttaaatatgtttttgatccctataaaattgggaccttttaaatttagtctttacttaattttattagttcttttagtcctta 44265412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 44265872 - 44265782
Alignment:
Q  182 aattacgggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||| |||||||||||||||||  ||| ||||||||  |||  || ||||||||||||||  ||||||||||||  ||||||||||||||    
T  44265872 aattaagggttaaatatgttttttgtccttataaaattggaaacttctaagtttagtctttacttaattttaataagttttttagtcctta 44265782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 2827228 - 2827147
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  |||  || ||||||||||| ||  |||||||||||||  ||||||||||    
T  2827228 gggttaaatatgtttttggtccctataaaatttgaagcttttaagtttagtccttacttaattttaatagtctttttagtcc 2827147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 5250802 - 5250721
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||||  || ||  |||||||||| || |||||||||||| | | |||||||||    
T  5250802 gggttaaatatgtttttggtccctataaaataaagacctttcaagtttagtccttatttaattttaatggttcttttagtcc 5250721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 38706850 - 38706773
Alignment:
Q  192 taaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||| ||||||||||||| | |  ||  ||||||||||||| |||||||||||||| | |||||||||    
T  38706850 taaatatgtttttggtccctataaaatagggatctttcaagtttagtctttatttaattttaatagttattttagtcc 38706773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 5250263 - 5250351
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||||| ||| ||||||||| | || ||  ||||||| || ||  ||||||||||||| ||||||||||| ||||||    
T  5250263 gggttaaatatgtttttggtccttataaaatagggacctttcaagtttaatccttacttaattttaataggttttttagtccctataaa 5250351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 17498435 - 17498507
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttt 263  Q
    ||||||||||| ||||||||||||||||  ||| ||||||||||||||| ||  ||||| ||||||| |||||    
T  17498435 ttaaatatgttattgatccctataaaattggaaatttataagtttagtccttacttaatcttaatagattttt 17498507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 25102371 - 25102288
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||||||||||||||||  |  ||||  |||||||||||||  ||||||||||| | | ||||||||||||    
T  25102371 gggttaaatatgtttttgatccctataaaatggggtcttt-caagtttagtctttacttaattttaatggttcttttagtcctta 25102288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 17842881 - 17842799
Alignment:
Q  190 gttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||| ||||||||||| | | |||||| ||||||||||| ||  |||||||||||||  |||||||||||||    
T  17842881 gttaaatatgtttttggtccctataaaattgaaaacttt-taagtttagtccttacttaattttaatagtatttttagtcctta 17842799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 8784458 - 8784539
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||||||||||||||| | |||  ||| ||||||||||| ||  ||||||||||||| | |||||||||    
T  8784458 gggttaaatatgtttttgatccctataaaattcagatattt-taagtttagtccttacttaattttaatagttcttttagtcc 8784539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 36126676 - 36126599
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    ||||||||||||| |||| ||||||||||| | |||||||| ||||||||||| ||  ||||||||||||| |||||||    
T  36126676 gggttaaatatgtgtttggtccctataaaattgagaacttt-taagtttagtccttacttaattttaataggtttttta 36126599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 547420 - 547339
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| || |||||||||| | || ||  ||||||| || ||  ||||||||||||| |||||||||||    
T  547420 gggttaaatatgtttttggtctctataaaatagggacctttcaagtttaatccttacttaattttaataggttttttagtcc 547339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 6590146 - 6590227
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  | |  || ||||||||||| ||  ||||||||||||| | |||||||||    
T  6590146 gggttaaatatgtttttggtccctataaaattgggatcttttaagtttagtccttacttaattttaatagttcttttagtcc 6590227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 33322413 - 33322497
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||| ||||||||  |||||||||  ||| |||| ||||||||||| ||  ||||||||||||| ||||||||||||||    
T  33322413 gggttaaatatctttttgatttctataaaattgagaccttt-taagtttagtccttacttaattttaatagtttttttagtcctta 33322497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 36909602 - 36909691
Alignment:
Q  188 gggttaaatatgtttttgatccct-ataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||||  | ||| ||||||| || ||||| | ||||||||||||  ||||||| ||||| | ||||||||||||||||    
T  36909602 gggttaaatatgtttttttttccttataaaattaggactttctgagtttagtctttacttaatttcaatagttattttagtccttataaa 36909691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 10409478 - 10409558
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    |||||||||||||||||| ||||| ||||||  | || || ||||||||||| ||  |||||||||||||  |||||||||    
T  10409478 gggttaaatatgtttttggtccctgtaaaattgggaccttttaagtttagtccttacttaattttaatagtgtttttagtc 10409558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 24451364 - 24451448
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||  ||||||||||||    || || ||||||||||| ||  ||||||||||||| ||||||||| ||||    
T  24451364 gggttaaatatgtttttagtccctataaaattgagacattttaagtttagtccttacttaattttaatagtttttttagttctta 24451448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 41590749 - 41590665
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||  | ||||||||||  | || || ||||||||||| ||  ||||||||||||| | ||||||||||||    
T  41590749 gggttaaatatgtttttagttcctataaaattgggaccttttaagtttagtccttacttaattttaatagttcttttagtcctta 41590665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 42950294 - 42950226
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatag 257  Q
    ||||||||||||||||| ||||||||||||    ||||| ||||||||||| ||  |||||||||||||    
T  42950294 ggttaaatatgtttttggtccctataaaattgttactttttaagtttagtccttacttaattttaatag 42950226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 21159724 - 21159802
Alignment:
Q  191 ttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||| |||||| ||||||||||||  |||||||  ||||||||||| ||  ||||||||||||| |||||||||||    
T  21159724 ttaaatatatttttggtccctataaaattgagaacttc-taagtttagtccttacttaattttaataggttttttagtcc 21159802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 38706316 - 38706395
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagt 267  Q
    |||||||||||||||||| ||||||||||||| | |  || |||||||| || ||  ||| ||||||||| |||||||||    
T  38706316 gggttaaatatgtttttggtccctataaaatagggatcttttaagtttaatcattacttatttttaataggttttttagt 38706395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 264
Target Start/End: Complemental strand, 12469615 - 12469541
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtc-tttgtttaattttaatagctttttt 264  Q
    ||||||||||||||| |||||||||||| || |  || ||||||||||| |||  ||||||||||||| ||||||    
T  12469615 ttaaatatgtttttggtccctataaaattaggaacttctaagtttagtcttttacttaattttaatagatttttt 12469541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 32988982 - 32988952
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaat 218  Q
    |||||||||||||||||||||||||||||||    
T  32988982 gggttaaatatgtttttgatccctataaaat 32988952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 36471236 - 36471155
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||| ||||| ||||||||||||| ||| ||||  |||||||||| ||  ||||||||||||| | |||||||||    
T  36471236 gggttaaatatgattttggtccctataaaatagagatcttt-caagtttagtccttacttaattttaatagttcttttagtcc 36471155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 14121811 - 14121892
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| | ||||||||||| | || ||  |||||||||| ||  ||||||||||| | | |||||||||    
T  14121811 gggttaaatatgtttttggttcctataaaatagggacctttcaagtttagtccttacttaattttaatggttcttttagtcc 14121892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 14122163 - 14122126
Alignment:
Q  182 aattacgggttaaatatgtttttgatccctataaaata 219  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  14122163 aattaagggttaaatatgtttttggtccctataaaata 14122126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 17498904 - 17498823
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| || |||||||||    ||||| ||||||||||| ||  |||||| ||||||  ||||||||||    
T  17498904 gggttaaatatgtttttgttctctataaaattgtgactttttaagtttagtccttacttaattctaatagtatttttagtcc 17498823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 276
Target Start/End: Original strand, 27000663 - 27000748
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||| |||||| ||||  | ||||  |||| || ||||||||||| ||  |||||||||||| |||||||||||| ||||||    
T  27000663 ttaaatatatttttggtccccgttaaatcggaaccttttaagtttagtccttacttaattttaatatcttttttagtccctataaa 27000748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 28755587 - 28755510
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    ||||||| |||||||| | |||||| |||||    || || ||||||||||| || ||||||||||||||||||||||    
T  28755587 gggttaattatgttttcggtccctacaaaattgcgaccttgtaagtttagtccttatttaattttaatagctttttta 28755510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 30133933 - 30133852
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||    | ||| ||||||||||| ||  |||||||||||||  |||||||||| ||||||    
T  30133933 atatgtttttggtccctataaaattgagattttttaagtttagtccttacttaattttaatagtgtttttagtccatataaa 30133852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 44893744 - 44893825
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | || || ||| ||||||| ||  |||||||||||||  |||||||||| ||||||    
T  44893744 atatgtttttggtccctataaaattgggaccttttaaatttagtccttacttaattttaatagtgtttttagtccatataaa 44893825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 5696320 - 5696245
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagt 267  Q
    ||||||||||||||||||||||||||||  ||  ||| ||||||||||| ||  |||||| |||| | |||||||||    
T  5696320 ttaaatatgtttttgatccctataaaat-tgagatttttaagtttagtccttacttaattataattgtttttttagt 5696245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 5728681 - 5728709
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  5728681 gggttaaatatgtttttgatccctataaa 5728709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 276
Target Start/End: Original strand, 5765605 - 5765677
Alignment:
Q  204 tgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||    || || ||||||||||| ||  ||||||||||||||||||||| ||| ||||||    
T  5765605 tgatccctataaaattgcgaccttctaagtttagtccttacttaattttaatagcttttttaatccctataaa 5765677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 272
Target Start/End: Complemental strand, 6590680 - 6590600
Alignment:
Q  192 taaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||| |||||  ||||||||||||  | |  || ||||||||||| ||  ||||||||||||| ||||||||||||||    
T  6590680 taaatatattttttgtccctataaaattgggaacttctaagtttagtccttacttaattttaataggttttttagtcctta 6590600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 11170213 - 11170185
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  11170213 gggttaaatatgtttttgatccctataaa 11170185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 12469495 - 12469427
Alignment:
Q  311 acaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaaca 379  Q
    ||||| ||||||||| || | |||||||| ||||| |||||||||||||||  | ||| ||||||||||    
T  12469495 acaaagtttgtttaattatccttaaactcctaaatttttgaataatttttttaagacaagtttagaaca 12469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 14395807 - 14395779
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  14395807 gggttaaatatgtttttgatccctataaa 14395779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 19295165 - 19295137
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  19295165 gggttaaatatgtttttgatccctataaa 19295137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 21160193 - 21160113
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    |||||||||||||||||  ||||||||||||  | || || |||||||| || || |||| ||||||||| | ||||||||    
T  21160193 gggttaaatatgttttttgtccctataaaattgggacattttaagtttaatccttatttagttttaatagttcttttagtc 21160113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 23483640 - 23483572
Alignment:
Q  311 acaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaaca 379  Q
    ||||| ||||||||| || | |||||||||||||| |||||| ||||||||  | ||| ||||||||||    
T  23483640 acaaagtttgtttaattatccttaaactcttaaatttttgaacaatttttttgagacaagtttagaaca 23483572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 27343768 - 27343740
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  27343768 gggttaaatatgtttttgatccctataaa 27343740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 30658450 - 30658518
Alignment:
Q  311 acaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaaca 379  Q
    ||||| ||||||||| || | |||||||||||||| ||||||| |||||||  | ||| ||||||||||    
T  30658450 acaaagtttgtttaattatccttaaactcttaaatttttgaattatttttttaagacaagtttagaaca 30658518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 30806214 - 30806290
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    |||||||||| |||||| | ||||||||||  |||  || |||||||||| |||  ||||||||||||| |||||||    
T  30806214 ggttaaatatatttttggttcctataaaattggaaacttttaagtttagtatttacttaattttaatagttttttta 30806290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 35778714 - 35778686
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  35778714 gggttaaatatgtttttgatccctataaa 35778686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 383
Target Start/End: Original strand, 36063431 - 36063503
Alignment:
Q  311 acaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
    ||||| ||||||||| || | |||||||||||||| ||||||  |||||||  | ||| ||||||||||||||    
T  36063431 acaaagtttgtttaattatccttaaactcttaaatttttgaacgatttttttgagacaagtttagaacattat 36063503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 36102133 - 36102161
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  36102133 gggttaaatatgtttttgatccctataaa 36102161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 123552 - 123467
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttata 274  Q
    |||||||||||||||||| ||||||||||||  |||| || ||||||||||| ||  || |||||||||| ||||||||||||||||    
T  123552 gggttaaatatgtttttggtccctataaaattggaaccttttaagtttagtccttactt-attttaataggttttttagtccttata 123467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 265
Target Start/End: Original strand, 54268732 - 54268806
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    ||||||||||||||| ||||||||||||   || |||||||||||||| |||  |||||||||||||||||||||    
T  54268732 ttaaatatgtttttggtccctataaaattgaaaatttataagtttagtttttacttaattttaatagctttttta 54268806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 44809250 - 44809169
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||  |||| || ||||||||||| ||  ||||||||||||| | |||||||||    
T  44809250 gggttaaatatgtttttggtccctataaaattggaaccttttaagtttagtccttacttaattttaatagttcttttagtcc 44809169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 53377686 - 53377598
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||||  |||||||||||| || |  || ||||||||||| ||  ||||||||||||| ||||||||||| ||||||    
T  53377686 gggttaaatatgtttttagtccctataaaattaggaacttctaagtttagtccttacttaattttaatagtttttttagtccctataaa 53377598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 27492734 - 27492657
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    |||||||||||||||||||||||||||||| | ||||| || ||||||||||| |   |||||||||||||||||||||    
T  27492734 gggttaaatatgtttttgatccctataaaattgagaac-ttctaagtttagtcctcaattaattttaatagctttttta 27492657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 44808714 - 44808795
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||| |||||||||||| || |||| || ||||||||||| ||  ||||||||||||| |||||||||||    
T  44808714 gggttaaatatgtttttaatccctataaaattacgaac-ttctaagtttagtccttacttaattttaataggttttttagtcc 44808795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 45406701 - 45406751
Alignment:
Q  332 ttaaactcttaaatatttgaataattttttgcatacatgtttagaacatta 382  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  45406701 ttaaactcttaaatttttgaacaattttttgcagacatgtttagaacatta 45406751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 53517659 - 53517740
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||| |||||||||| ||||||||||||  |||||||| |||||||| || || |||||||||||||| |||||||||||    
T  53517659 gggttaattatgtttttggtccctataaaattgagaacttt-taagtttaatccttatttaattttaataggttttttagtcc 53517740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 383
Target Start/End: Complemental strand, 4017266 - 4017074
Alignment:
Q  190 gttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaatttgtgtttgcac 289  Q
    ||||||||||||||||||   |||||||| |  ||||| || |||||||  ||  ||||||||||||| | ||||||||||||||  ||| | |||| ||    
T  4017266 gttaaatatgtttttgatttttataaaatgacgactttttaggtttagttcttacttaattttaatagatattttagtccttatactttttt-tttgtac 4017168  T
Q  290 gcaagtttagtctcaaataatacaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
     |  ||||||||    |||| |||||||| |||| |||||  |||||||| ||||| ||| || |||| ||| |||||||||||| ||||||||    
T  4017167 acgggtttagtccttgataaaacaaaattagttttactaatcttaaactcctaaatttttcaacaattgttttcatacatgtttataacattat 4017074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 19601432 - 19601519
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||| |||||||||||||||    || || |||||||| || ||  ||||||||||||| | ||||||||||||||||    
T  19601432 ggttaaatatgtttctgatccctataaaattgagaccttctaagtttaatcattacttaattttaatagatattttagtccttataaa 19601519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 38173784 - 38173863
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagt 267  Q
    |||||||||||||||||| ||||||||||||| |||  ||  |||||||||| ||  ||||||||||||| | |||||||    
T  38173784 gggttaaatatgtttttggtccctataaaataggaaactttcaagtttagtccttacttaattttaatagttcttttagt 38173863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 19601968 - 19601890
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||| ||| ||||||||  ||| ||| |||||||| ||||   |||| ||||||||||||||||||||    
T  19601968 ttaaatatgtttttggtccatataaaattggaaatttctaagtttaatcttcacttaaatttaatagcttttttagtcc 19601890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 38174319 - 38174241
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||| | ||||||||||| | || || |||||||| || ||  ||||||||||||| |||||||||||    
T  38174319 ttaaatatgtttttggttcctataaaatagggaccttttaagtttaatccttacttaattttaataggttttttagtcc 38174241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 52701050 - 52701131
Alignment:
Q  195 atatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  ||| |||| ||||||||||||||  |||||||||||||  |||||||||| ||||||    
T  52701050 atatgtttttggtccctataaaattgagaccttt-taagtttagtctttacttaattttaatagtgtttttagtccatataaa 52701131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 14525208 - 14525127
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||  |||||||||| |  | | ||| ||||||||||| ||  ||||||||||||| |||||||||||    
T  14525208 gggttaaatatgtttttcgtccctataaatttgggaatttctaagtttagtccttacttaattttaataggttttttagtcc 14525127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 34995421 - 34995509
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||||| ||||||||||| | ||| |||| |||| |||||| ||  ||||||||||||| |||| |||||| ||||||    
T  34995421 gggttaaatatgtttttggtccctataaaattgagaccttt-taagattagtccttacttaattttaataggttttctagtccctataaa 34995509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 52702066 - 52701985
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | ||||| | ||||||||| ||  |||||||||||||  |||||||||| ||||||    
T  52702066 atatgtttttggtccctataaaattgggacttttttagtttagtccttacttaattttaatagtgtttttagtccatataaa 52701985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 53396980 - 53397061
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||||||  ||||||||||||    || |||||||||||||| ||  ||||||||||||| | ||||||||||||    
T  53396980 ttaaatatgtttttagtccctataaaattgagacattataagtttagtccttacttaattttaatagttgttttagtcctta 53397061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 23917212 - 23917295
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||||||||| || |||||||||  ||| |||| ||||||||||| ||  ||||||||||||| | ||||||||||||    
T  23917212 ggttaaatatgtttttggtctctataaaattgagatcttt-taagtttagtccttacttaattttaatagttcttttagtcctta 23917295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 27492196 - 27492280
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||||||||| |||  ||||||||  | |  || |||||||||| ||| |||||||||||||| | ||||||||||||    
T  27492196 gggttaaatatgtttttaatctatataaaattgggatcttttaagtttagtttttatttaattttaatagttcttttagtcctta 27492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 29348158 - 29348226
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaata 256  Q
    |||||||||||||||||| ||||||||||||  | || || ||||||||||| ||  ||||||||||||    
T  29348158 gggttaaatatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaata 29348226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 383
Target Start/End: Original strand, 45419782 - 45419854
Alignment:
Q  311 acaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
    ||||| ||||||||| || |||||||||||||||| ||||||  |||||||  | ||| ||||||||||||||    
T  45419782 acaaagtttgtttaattatctttaaactcttaaatttttgaacgattttttttagacaagtttagaacattat 45419854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 53518197 - 53518113
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||  ||||||||||||  | || || ||||||||||| ||  ||||||||||||| | ||||| ||||||    
T  53518197 gggttaaatatgtttttagtccctataaaattgggaccttttaagtttagtccttacttaattttaatagttcttttaatcctta 53518113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 46294974 - 46295017
Alignment:
Q  229 taagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||| || |||||||||||||||||||||| ||||||    
T  46294974 taagtttagtccttatttaattttaatagcttttttaatcctta 46295017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 8576309 - 8576228
Alignment:
Q  195 atatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  ||| |||| ||||||||||| ||  |||||||||||||  |||||||||| ||||||    
T  8576309 atatgtttttgctccctataaaattgagaccttt-taagtttagtccttacttaattttaatagtgtttttagtccatataaa 8576228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 11045823 - 11045793
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaat 218  Q
    |||||||||||||||||||||||||||||||    
T  11045823 gggttaaatatgtttttgatccctataaaat 11045793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 16056339 - 16056273
Alignment:
Q  210 ctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||| ||||  || ||||||||||||||  ||||||||||||| ||||| |||| |||||||    
T  16056339 ctataaaattagaatattttaagtttagtctttacttaattttaatagttttttaagtctttataaa 16056273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 26200268 - 26200238
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaat 218  Q
    |||||||||||||||||||||||||||||||    
T  26200268 gggttaaatatgtttttgatccctataaaat 26200238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 29348692 - 29348611
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataa-gaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||| ||  |||||||||||| | ||||||  ||||||||||| ||  ||||||||||||| |||||||||||    
T  29348692 gggttaaatatgttcttagtccctataaaattacgaacttc-taagtttagtccttacttaattttaataggttttttagtcc 29348611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 41187744 - 41187710
Alignment:
Q  182 aattacgggttaaatatgtttttgatccctataaa 216  Q
    ||||| |||||||||||||||||||||||||||||    
T  41187744 aattaagggttaaatatgtttttgatccctataaa 41187710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 48809931 - 48809865
Alignment:
Q  295 tttagtctcaaataatacaaaatttgtttaactaactttaaactcttaaatatttgaataatttttt 361  Q
    ||||||| | ||||| |||||||||||||||| ||| ||||||||| || | |||||| ||||||||    
T  48809931 tttagtccctaataaaacaaaatttgtttaacaaaccttaaactctaaattttttgaacaatttttt 48809865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 9018438 - 9018357
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||||||| ||| ||||||||    | ||| ||||||||||| ||  ||||||||||||  ||||||||||||||    
T  9018438 ttaaatatgtttttggtccttataaaatggataatttttaagtttagtccttacttaattttaatacattttttagtcctta 9018357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 23917739 - 23917663
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagctttttt 264  Q
    ||||||||||| |||||| ||||||||||| | |||| ||| ||||||||||| ||  ||||||||||||| ||||||    
T  23917739 gggttaaatatttttttggtccctataaaattgagaa-tttctaagtttagtccttacttaattttaataggtttttt 23917663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 33475359 - 33475440
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||  ||||||||||||  |||| || ||||||||||| ||  |||||| ||||||  |||||||||| ||||||    
T  33475359 atatgttttttgtccctataaaattggaaccttttaagtttagtccttacttaattataatagtgtttttagtccatataaa 33475440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 40762476 - 40762557
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||| |||||  ||| ||||||||  | | ||| ||||||||||| ||  ||||||||||||| |||||||||||    
T  40762476 gggttaaatatatttttagtccttataaaattgggaatttttaagtttagtccttacttaattttaataggttttttagtcc 40762557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 41928244 - 41928163
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | || || ||||||||||| ||  |||||| ||||||  |||||||||| ||||||    
T  41928244 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattataatagtgtttttagtccatataaa 41928163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 273
Target Start/End: Complemental strand, 44288686 - 44288601
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttat 273  Q
    |||||||||||| ||||| | |||||||| |  | ||| |||| |||||||  || |||||||||||||| |||| ||||||||||    
T  44288686 gggttaaatatggttttggttcctataaatttgggactgtatacgtttagttcttatttaattttaatagtttttctagtccttat 44288601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 46295474 - 46295397
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    ||||||||||| |||||| ||||||||||||    || || |||||||| || ||  |||||||||||||||||||||    
T  46295474 gggttaaatatatttttggtccctataaaattgtgaccttctaagtttaatccttacttaattttaatagctttttta 46295397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 218
Target Start/End: Complemental strand, 54269256 - 54269227
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaat 218  Q
    ||||||||||||||||||||||||||||||    
T  54269256 ggttaaatatgtttttgatccctataaaat 54269227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 17380273 - 17380301
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  17380273 gggttaaatatgtttttgatccctataaa 17380301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 19158853 - 19158881
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  19158853 gggttaaatatgtttttgatccctataaa 19158881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 33805958 - 33805986
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  33805958 gggttaaatatgtttttgatccctataaa 33805986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 36803683 - 36803619
Alignment:
Q  112 tgacatgtcattgttaagactttaaaacatcactggcttaaatacttaactatttaatctttaat 176  Q
    |||||||||||||| ||||| |||||| |||| || |||||  ||||||||||| ||||| ||||    
T  36803683 tgacatgtcattgtaaagaccttaaaatatcattgtcttaacaacttaactattaaatctctaat 36803619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 40852767 - 40852795
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  40852767 gggttaaatatgtttttgatccctataaa 40852795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 48180860 - 48180832
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  48180860 gggttaaatatgtttttgatccctataaa 48180832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 49083316 - 49083344
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  49083316 gggttaaatatgtttttgatccctataaa 49083344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 49492177 - 49492149
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  49492177 gggttaaatatgtttttgatccctataaa 49492149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 54185729 - 54185649
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    |||||||||||||||||  ||||||||||||    || || ||||||||||| ||  ||||||||||||| | ||||||||    
T  54185729 gggttaaatatgtttttagtccctataaaattgagacattttaagtttagtccttacttaattttaatagttgttttagtc 54185649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 54851862 - 54851834
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  54851862 gggttaaatatgtttttgatccctataaa 54851834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 55378743 - 55378771
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  55378743 gggttaaatatgtttttgatccctataaa 55378771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 3739 - 3820
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||| | || || |||||||| || ||  ||||||||||||| |||||||||||    
T  3739 gggttaaatatgtttttggtccctataaaatagggaccttttaagtttaatccttacttaattttaataggttttttagtcc 3820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 4403 - 4338
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaatttta 253  Q
    |||||||||||||||||| ||||||||||||| | || || |||||||||| |||  |||||||||    
T  4403 gggttaaatatgtttttggtccctataaaatatggaccttttaagtttagtttttacttaatttta 4338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 3872920 - 3873001
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||| | || || |||||||| || ||  ||||||||||||| |||||||||||    
T  3872920 gggttaaatatgtttttggtccctataaaatagggaccttttaagtttaatccttacttaattttaataggttttttagtcc 3873001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 47463298 - 47463379
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||| ||||||||||||||||||||||||| |  || || ||||||||||| || |||||||||||||| | |||||||||    
T  47463298 gggtttaatatgtttttgatccctataaaattaagacattttaagtttagtccttatttaattttaatagttcttttagtcc 47463379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 52947637 - 52947725
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||||| ||||||||||||  |||   | ||||||||||| ||  ||||||||||||||||||||| ||| ||||||    
T  52947637 gggttaaatatgtttttggtccctataaaattggaaacatctaagtttagtccttacttaattttaatagcttttttaatccctataaa 52947725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 14579141 - 14579058
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||||| |||||||||  |    || ||||||||||| ||  ||||||||||||||||||||||||||||    
T  14579141 ggttaaatatgtttttgatctctataaaattgggtacttctaagtttagtccttacttaattttaatagcttttttagtcctta 14579058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 33177832 - 33177754
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagt 267  Q
    ||||||||||||||||| ||||||||||||| ||  ||| ||| ||||||| || |||||||||||| | |||||||||    
T  33177832 ggttaaatatgtttttggtccctataaaataggagttttttaaatttagtccttatttaattttaatggtttttttagt 33177754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 265
Target Start/End: Complemental strand, 44290095 - 44290009
Alignment:
Q  180 ataattacgggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    ||||||| |||||||||||||||||| ||||||||||| |  || | || ||||||||||| ||  |||||||||||||||||||||    
T  44290095 ataattaagggttaaatatgtttttggtccctataaaattgcgacccttctaagtttagtccttacttaattttaatagctttttta 44290009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 383
Target Start/End: Complemental strand, 47839538 - 47839468
Alignment:
Q  313 aaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
    |||||||||| ||||||  |||||| ||||||| || ||| ||||||||||||| ||||||||||||||||    
T  47839538 aaaatttgttgaactaagcttaaacccttaaattttagaacaattttttgcataaatgtttagaacattat 47839468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 52948174 - 52948093
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||| ||||| |||| |||| |||||| ||  ||||||||||||| |||||||||||    
T  52948174 gggttaaatatgtttttggtccctataaaattaagatcttt-taagattagtccttacttaattttaataggttttttagtcc 52948093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 13604203 - 13604122
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| | |||||||||| | ||  | |||||||||||||||  |||||||||||| | ||||||||||    
T  13604203 gggttaaatatgtttttgtttcctataaaattaaaaactaataagtttagtctttacttaattttaataacatttttagtcc 13604122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 22068518 - 22068437
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||| || ||||||||||||  |||  || ||||||||||| ||  ||||||||||||| |||||||||||    
T  22068518 gggttaaatatgtttctggtccctataaaattggaaacttctaagtttagtccttacttaattttaatagattttttagtcc 22068437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 33177296 - 33177377
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||||||||||||||||| | || ||  ||||||| ||  |  ||||||||||||| |||||||||||    
T  33177296 gggttaaatatgtttttgatccctataaaatagggacctttcaagtttaatccatacttaattttaatagattttttagtcc 33177377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 7491110 - 7491027
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaat-aagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||||||||  |||||||||||| ||||| || | ||||||| |||||  ||||||||||||| ||||||||||||||    
T  7491110 ggttaaatatgtttttagtccctataaaattaagaatttca-aagtttattctttacttaattttaataggttttttagtcctta 7491027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 20650807 - 20650727
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    ||||||||||||||||||  |||||||||||   ||| || ||||||||||| ||  ||||||||||||| ||||||||||    
T  20650807 gggttaaatatgtttttgtaccctataaaattgaaacattttaagtttagtccttacttaattttaatagtttttttagtc 20650727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 38499170 - 38499256
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataa-gaactttataagtttagtctttgtttaattttaatagcttttttagtccttata 274  Q
    ||||||||||||||||| ||||||| |||||   || |||| |||||||||||||| ||||||||||||||  |||||||||| ||||    
T  38499170 gggttaaatatgtttttaatccctaaaaaattgtgatcttt-taagtttagtctttatttaattttaatagtatttttagtccctata 38499256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 51396025 - 51395958
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaata 256  Q
    |||||||||||||||| |||||||||||||  | || || ||||||||||| || |||||||||||||    
T  51396025 ggttaaatatgtttttaatccctataaaattgggaccttttaagtttagtccttatttaattttaata 51395958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 2179399 - 2179449
Alignment:
Q  332 ttaaactcttaaatatttgaataattttttgcatacatgtttagaacatta 382  Q
    |||||||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  2179399 ttaaactcataaatttttgaaagattttttgcatacatgtttagaacatta 2179449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 4849975 - 4850056
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||||||||||||||| | ||| |||| |||||||| || ||| ||||||| ||||| | |||||||||    
T  4849975 gggttaaatatgtttttgatccctataaaattgagaccttt-taagtttaatccttgcttaatttaaatagttcttttagtcc 4850056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 383
Target Start/End: Complemental strand, 30210244 - 30210174
Alignment:
Q  313 aaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacattat 383  Q
    ||||||||||||| ||  |||||||| | |||| ||||||  ||||||| |||||||||||||||||||||    
T  30210244 aaaatttgtttaattatgtttaaactttcaaatttttgaactattttttacatacatgtttagaacattat 30210174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 3873584 - 3873519
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaatttta 253  Q
    |||||||||||||||||| ||||||||||||| | || || |||||||||| |||  |||||||||    
T  3873584 gggttaaatatgtttttggtccctataaaatatggaccttttaagtttagtttttacttaatttta 3873519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 10085902 - 10085822
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataag-aactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||| ||| ||||||||  | ||||||| |||||||||| ||   ||||||||||||||||||||||||    
T  10085902 ggttaaatatgtttttggtccttataaaattgggaacttta-aagtttagtccttacataattttaatagcttttttagtcc 10085822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 19523133 - 19523052
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||| | || ||  |||||||||| ||  ||||||||||| | | |||||||||    
T  19523133 gggttaaatatgtttttggtccctataaaatagggacctttcaagtttagtccttacttaattttaatggttcttttagtcc 19523052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 22067980 - 22068061
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||| |||||| ||||||||||||    || |||||||||||||| ||  ||||||||||||| | |||||||||    
T  22067980 gggttaaatatatttttggtccctataaaattgataccttataagtttagtccttacttaattttaatagttcttttagtcc 22068061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 10085513 - 10085561
Alignment:
Q  334 aaactcttaaatatttgaataattttttgcatacatgtttagaacatta 382  Q
    |||||||||| | | |||||||||||||||| |||||||||||||||||    
T  10085513 aaactcttaagtttgtgaataattttttgcagacatgtttagaacatta 10085561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 38114624 - 38114544
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||| ||||||||||||||| || ||  ||||||| || ||  ||||||||||| | | |||||||||    
T  38114624 ggttaaatatgtttttggtccctataaaataaggacctttcaagtttaatcattacttaattttaatggttcttttagtcc 38114544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 47379589 - 47379501
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||||||||||||| |||| |||||||  | || || ||||||||| | ||  ||||||||||||| |||||||| || ||||||    
T  47379589 gggttaaatatgtttttggtcccaataaaatcgggaccttctaagtttagcccttacttaattttaatagtttttttagcccctataaa 47379501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 51395489 - 51395569
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||||| | ||||||||||| | |  || ||||||||||| ||  ||||||||||||  |||||||||||    
T  51395489 ggttaaatatgtttttggttcctataaaatagggaacttctaagtttagtccttacttaattttaataagttttttagtcc 51395569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 219
Target Start/End: Complemental strand, 5093043 - 5093012
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata 219  Q
    ||||||||||||||||||||||||||||||||    
T  5093043 gggttaaatatgtttttgatccctataaaata 5093012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 7617729 - 7617662
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaat 255  Q
    ||||||||||| |||||||||||||||||||| |  | || ||||||||||| ||  |||||||||||    
T  7617729 gggttaaatatatttttgatccctataaaatatgggccttttaagtttagtccttacttaattttaat 7617662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 44289600 - 44289643
Alignment:
Q  229 taagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||| || |||||||||||||||||||||| ||||||    
T  44289600 taagtttagtccttatttaattttaatagcttttttaatcctta 44289643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 219
Target Start/End: Original strand, 45756311 - 45756342
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata 219  Q
    ||||||||||||||||||||||||||||||||    
T  45756311 gggttaaatatgtttttgatccctataaaata 45756342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 48082366 - 48082409
Alignment:
Q  229 taagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||| || |||||||||||||||||||||| ||||||    
T  48082366 taagtttagtccttatttaattttaatagcttttttaatcctta 48082409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 7499162 - 7499081
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaata-agaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||| ||||||||||||| ||| ||||||||  |||||||  |||||||| |||||  ||||||||||||| |||||||||||    
T  7499162 gggtgaaatatgtttttggtccttataaaattgagaacttc-taagtttattctttacttaattttaataggttttttagtcc 7499081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 10321987 - 10321925
Alignment:
Q  317 tttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaaca 379  Q
    ||||||||| || |||||||||||||||| |||||| ||||||||  | ||| ||||||||||    
T  10321987 tttgtttaattatctttaaactcttaaatttttgaacaatttttttgacacaagtttagaaca 10321925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 28448268 - 28448346
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||  |||||||||||  | |  || ||||||||||| ||  ||||||||||||| |||||||||||    
T  28448268 ttaaatatgtttttggaccctataaaattgggaacttctaagtttagtccttacttaattttaataggttttttagtcc 28448346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 43938361 - 43938323
Alignment:
Q  180 ataattacgggttaaatatgtttttgatccctataaaat 218  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  43938361 ataattaagggttaaatatgtttttggtccctataaaat 43938323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 218
Target Start/End: Original strand, 51956350 - 51956380
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaat 218  Q
    |||||||||||||||||||||||||||||||    
T  51956350 gggttaaatatgtttttgatccctataaaat 51956380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 55283525 - 55283447
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||| ||| ||||||||  |||  || ||||||||||||||  ||||||||||||   ||||||||||    
T  55283525 ttaaatatgtttttggtccgtataaaattggaaacttctaagtttagtctttacttaattttaataatatttttagtcc 55283447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 13508756 - 13508837
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||  | || || ||||||||||| ||  |||||||||||||   ||||||||| ||||||    
T  13508756 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaatagtgcttttagtccatataaa 13508837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 26649725 - 26649758
Alignment:
Q  183 attacgggttaaatatgtttttgatccctataaa 216  Q
    |||| |||||||||||||||||||||||||||||    
T  26649725 attaagggttaaatatgtttttgatccctataaa 26649758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 31470847 - 31470928
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||||||||  ||||||||||||    || || ||||||||||| ||  ||||||||||||| | ||||||||||||    
T  31470847 ttaaatatgtttttagtccctataaaattgagacattttaagtttagtcattacttaattttaatagttgttttagtcctta 31470928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 38499705 - 38499620
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    |||||||| ||| || ||||||||||||  | |  || ||||||||||| ||  ||||||||||||| ||||||||||| ||||||    
T  38499705 ttaaatatatttgtggtccctataaaatttggaacttctaagtttagtccttacttaattttaatagtttttttagtccctataaa 38499620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 39669612 - 39669641
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaat 218  Q
    ||||||||||||||||||||||||||||||    
T  39669612 ggttaaatatgtttttgatccctataaaat 39669641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 268
Target Start/End: Complemental strand, 42973093 - 42973016
Alignment:
Q  191 ttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    |||||||| |||||||||||||||||||  | | ||| ||||||| ||| ||  ||||||||||||| || |||||||    
T  42973093 ttaaatatatttttgatccctataaaattggtattttttaagtttggtccttacttaattttaatagtttgtttagtc 42973016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 44451975 - 44452056
Alignment:
Q  195 atatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaa 276  Q
    ||||||||||| ||||||||||||    || |||||||||||||| ||  |||||| ||||||  |||||||||| ||||||    
T  44451975 atatgtttttggtccctataaaattgtgaccttataagtttagtccttacttaattataatagtgtttttagtccatataaa 44452056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 47309854 - 47309773
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||| |||||| ||||||||||||| | || ||  ||||||| || ||  ||||||||||||  |||||||||||    
T  47309854 gggttaaatatatttttggtccctataaaatagggacctttcaagtttaatccttacttaattttaatatattttttagtcc 47309773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 48219763 - 48219847
Alignment:
Q  187 cgggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||| |||||||| ||| ||||||||||  | | ||| ||||||||||| |   |||| |||||||||||||||||||||||    
T  48219763 cgggttaagtatgtttt-gattcctataaaattgggaatttttaagtttagtcctcacttaaatttaatagcttttttagtcctta 48219847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 5497153 - 5497125
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  5497153 gggttaaatatgtttttgatccctataaa 5497125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 6818089 - 6818021
Alignment:
Q  312 caaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaacat 380  Q
    |||||||||||||| ||  |||||||||||| || |||||| ||||||||| |||| | || |||||||    
T  6818089 caaaatttgtttaattatgtttaaactcttacatttttgaacaattttttgtatacgttttaagaacat 6818021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 11671047 - 11670963
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||||| |||||||  |||||||||||| |   | || ||||||||||| ||  ||||||||||||| | ||||||||||||    
T  11671047 gggttaaatttgtttttagtccctataaaattaaggcattttaagtttagtccttacttaattttaatagttgttttagtcctta 11670963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 19037389 - 19037417
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  19037389 gggttaaatatgtttttgatccctataaa 19037417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 23454349 - 23454377
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  23454349 gggttaaatatgtttttgatccctataaa 23454377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 28448388 - 28448456
Alignment:
Q  311 acaaaatttgtttaactaactttaaactcttaaatatttgaataattttttgcatacatgtttagaaca 379  Q
    ||||| ||||||||| || | |||||||||||||| ||||||| |||||||  | ||| ||||||||||    
T  28448388 acaaagtttgtttaattatccttaaactcttaaatttttgaatgatttttttgagacaagtttagaaca 28448456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 28448799 - 28448715
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaatttt-aatagcttttttagtcctta 272  Q
    ||||||||||||||||  ||||||||||||  | || ||  |||||||||| ||  |||||||| ||||| ||||||||||||||    
T  28448799 ggttaaatatgttttttgtccctataaaattgggacctttcaagtttagtccttacttaattttaaatagtttttttagtcctta 28448715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 29771541 - 29771569
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  29771541 gggttaaatatgtttttgatccctataaa 29771569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 268
Target Start/End: Complemental strand, 30331690 - 30331611
Alignment:
Q  191 ttaaatatgtttttgatccctat--aaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtc 268  Q
    ||||||||||||||| |||||||  |||||| | || || |||||| |||| ||  ||||||||||||| ||||||||||    
T  30331690 ttaaatatgtttttggtccctatttaaaatagggaccttttaagttcagtccttacttaattttaatagtttttttagtc 30331611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 34373616 - 34373588
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  34373616 gggttaaatatgtttttgatccctataaa 34373588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 35119918 - 35119946
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  35119918 gggttaaatatgtttttgatccctataaa 35119946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 53569036 - 53569120
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||  | ||||||||||    || || ||||||||||| ||  ||||||||||||| | ||||||||||||    
T  53569036 gggttaaatatgtttttagttcctataaaattgagacattttaagtttagtccttacttaattttaatagttgttttagtcctta 53569120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 54789125 - 54789097
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  54789125 gggttaaatatgtttttgatccctataaa 54789097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 238234 - 238317
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    |||||||||||||||||||| |||||||||  |    || ||||||||||| ||  ||||||||||||||||||||||||||||    
T  238234 ggttaaatatgtttttgatctctataaaattgggtacttctaagtttagtccttacttaattttaatagcttttttagtcctta 238317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 5792 - 5873
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||||||||||||| ||||||||||||| | || ||  ||||||| || ||  ||||||||||||| |||||||||||    
T  5792 gggttaaatatgtttttggtccctataaaatagggacctttcaagtttaatccttacttaattttaatagattttttagtcc 5873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 3561 - 3477
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcctta 272  Q
    ||||||| |||||||| | |||||| |||||    || |||||||||||||| || |||||||||||||||||||||| ||||||    
T  3561 gggttaattatgttttcggtccctacaaaattgtgaccttataagtttagtccttatttaattttaatagcttttttaatcctta 3477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 2727 - 2802
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttt 264  Q
    |||||||||| |||||| ||||||||||||   ||| || ||||||||||| ||  |||||||||||||| |||||    
T  2727 ggttaaatatatttttggtccctataaaattgcaaccttctaagtttagtccttacttaattttaatagccttttt 2802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1191 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 1088 - 1007
Alignment:
Q  187 cgggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    |||||||| ||||||| || ||||||||||||  ||| ||| ||||||||||| ||  ||||||||||||| |||||||||||    
T  1088 cgggttaactatgtttctggtccctataaaattggaaatttttaagtttagtccttacttaattttaatag-ttttttagtcc 1007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 25061 - 25012
Alignment:
Q  314 aaatttgtttaactaactttaaactcttaaatatttgaataattttttgc 363  Q
    |||||||||||| ||  ||||||||||||||| |||||||||||||||||    
T  25061 aaatttgtttaattatgtttaaactcttaaatttttgaataattttttgc 25012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 24798 - 24710
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagtccttataaat 277  Q
    ||||||||||||||||  ||||| ||||||   | | || ||||||||||| || |||||||||||||| | |||||||||||| ||||    
T  24798 ggttaaatatgtttttagtccctgtaaaattgaagcattttaagtttagtccttatttaattttaatagttgttttagtccttacaaat 24710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 17255 - 17333
Alignment:
Q  191 ttaaatatgtttttgatccctataaaa-taagaactttataagtttagtctttgtttaattttaatagcttttttagtcc 269  Q
    ||||||||||||||| ||||||||||| | |||| ||| |||||||| || ||  ||||||||||||| |||||||||||    
T  17255 ttaaatatgtttttggtccctataaaattgagaa-tttctaagtttaatccttacttaattttaatagtttttttagtcc 17333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 6004 - 5974
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaat 218  Q
    |||||||||||||||||||||||||||||||    
T  6004 gggttaaatatgtttttgatccctataaaat 5974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 6587 - 6509
Alignment:
Q  189 ggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagcttttttagt 267  Q
    ||||||||||||||||| ||||||||||||    || || ||||||||||| ||  ||||||||||||| | |||||||    
T  6587 ggttaaatatgtttttggtccctataaaattgagacattttaagtttagtccttacttaattttaatagttcttttagt 6509  T

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Target: scaffold0066 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 216
Target Start/End: Complemental strand, 16858 - 16828
Alignment:
Q  186 acgggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||||    
T  16858 acgggttaaatatgtttttgatccctataaa 16828  T

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Target: scaffold0640 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 265
Target Start/End: Original strand, 3766 - 3843
Alignment:
Q  188 gggttaaatatgtttttgatccctataaaataagaactttataagtttagtctttgtttaattttaatagctttttta 265  Q
    |||||||||||||||||| |||| |||||||    || || ||||||||||| ||  ||||||||||||| |||||||    
T  3766 gggttaaatatgtttttggtcccaataaaattgcgaccttctaagtttagtccttacttaattttaatagttttttta 3843  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 15010 - 15038
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  15010 gggttaaatatgtttttgatccctataaa 15038  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 48742 - 48770
Alignment:
Q  188 gggttaaatatgtttttgatccctataaa 216  Q
    |||||||||||||||||||||||||||||    
T  48742 gggttaaatatgtttttgatccctataaa 48770  T

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