View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18243_low_70 (Length: 355)
Name: NF18243_low_70
Description: NF18243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18243_low_70 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 56 - 333
Target Start/End: Complemental strand, 8908710 - 8908432
Alignment:
| Q |
56 |
tatgaggttggagatttgtgtgaaaaatggttaaggtgaaaggtggtatttataggggtttatttagggtgtaagagaatatatcatatctaaggctata |
155 |
Q |
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| T |
8908710 |
tatgaggttggagatttgtgtgaaaaatggttaaggtgaaaggtggtatttataggggtttatttagggtgtaagagaatatatcatatctaaggctata |
8908611 |
T |
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| Q |
156 |
tgagagtggatcagtggagtgtgnnnnnnnnnnnnnnnnnnn-aatatattctttatttttgaattcttaaaatcatggggtgtgtgctatcttctactt |
254 |
Q |
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| T |
8908610 |
tgagagtggatcagtggagtgtgttgtttttttttttttttttaatatattctttatttttgaattcttaaaatcatggggtgtgtgctatcttctactt |
8908511 |
T |
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| Q |
255 |
tttctatgctataatataataatacaaaagtacataaagtaagtcatactctcatcactactagtcgtcaccttatgcc |
333 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8908510 |
tttctatgctataatataataatacaaaagtacataaagtaagtcatactctcatcactactagtcgtcaccttatgcc |
8908432 |
T |
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