View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18243_low_90 (Length: 289)
Name: NF18243_low_90
Description: NF18243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18243_low_90 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 25 - 273
Target Start/End: Original strand, 38442277 - 38442525
Alignment:
| Q |
25 |
aagataatattaacttgtttcaataaaggttcaaggaagagtataatatcatttgcaaatgctaagtgataaatattcaacttcttcaaacaagctagaa |
124 |
Q |
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| T |
38442277 |
aagataatattaacttgtttcaataaaggttcaaggaaaagtataatatcatttgcaaatgctaagtgataaatattcaacctcttcaaacaagctagaa |
38442376 |
T |
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| Q |
125 |
aataagaagttaaaatgctcttaaatttcttaaggttaacggggtttcacccctaccatttggctaaatttgaggatacatcttggtaacttcttttctt |
224 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38442377 |
aataagaagttaaaatgctcttaaatttcttaaggttaagagggtttcacccctaccatttggctaaatttgaggatacatcttggtaacttcttttctt |
38442476 |
T |
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| Q |
225 |
tatattctcccttaaaactaagaccaaatcgcttggctgatgtgacttg |
273 |
Q |
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||||||||||||||||| ||||||||||||| ||||||||| ||||||| |
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| T |
38442477 |
tatattctcccttaaaattaagaccaaatcgtttggctgatatgacttg |
38442525 |
T |
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