View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18243_low_94 (Length: 281)
Name: NF18243_low_94
Description: NF18243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18243_low_94 |
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Alignment Details
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 39751520 - 39751275
Alignment:
| Q |
19 |
attagttagtacaagaagataattttcacctgaataatccaaatgaagtttgaaagataccagcaaagagtgtggcaagaaaaatgagctttgtataacc |
118 |
Q |
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| T |
39751520 |
attagttagtacaagaagataattttcacctgaatagtccaaatgaagtttgaaagataccagcaaagagtgtggcaagaaaaatgagctttgtataacc |
39751421 |
T |
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| Q |
119 |
aattggatcagtagaagggtctactaatttttgaaccatcgatgataacagcaacgaaaccacggccacaggaccaattgctatttctcttgatgttccc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39751420 |
aattggatcagtagaagggtctactaatttttgaaccatcgatgataacagcaacgaaaccacggccacaggaccaattgctatttctcttgatgttccc |
39751321 |
T |
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| Q |
219 |
attacagcgtatataagcggtggtacaacactcgtatctatttcat |
264 |
Q |
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| T |
39751320 |
attacagcgtatataagcggtggtacaacactcgtatctatttcat |
39751275 |
T |
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