View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18245_low_3 (Length: 478)
Name: NF18245_low_3
Description: NF18245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18245_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 456; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 1 - 468
Target Start/End: Original strand, 48695347 - 48695814
Alignment:
| Q |
1 |
ggaatgttaaggattgatatacccaatgagtgtgaggccactacttcatcatcatcacccttatcttcggcggaagggagattaaagtcattaaagaggc |
100 |
Q |
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| T |
48695347 |
ggaatgttaaggattgatatacccaatgagtgtgaggccactacttcatcatcatcacccttatcttcggcggaagggagattaaagtcattaaagaggc |
48695446 |
T |
|
| Q |
101 |
ttttaagcagtagcagcagaggcataatgagcctgaatccttggagtcccacttctactgtccaacaacaaacaaagccaaaggaagcagcaggacaaag |
200 |
Q |
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| T |
48695447 |
ttttaagcagtagcagcagaggcataatgagcctgaatccttggagtcccacttctactgtccaacaacaaacaaagccaaaggaagcagcaggacaaag |
48695546 |
T |
|
| Q |
201 |
ctagctggctggctagggtggaactccaatttcccaatgttttattcattcattcattattatactttttaagtacatatatagatgtacatgtaggtat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48695547 |
ctagctggctggctagggtggaactccaatttcccaatgttttattcattcattcattattatactttttaagtacatatatagatgtacatgtaggtat |
48695646 |
T |
|
| Q |
301 |
gttaatgtaagcccgcccaaactgaggcagcagcaatcaatcaatcaaagttgtacattatacaaatactctgagaatagaaaattaaatttaaaacaaa |
400 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48695647 |
gttaatgtaagcccgcccaaactgaggcagcagcaatcaatcaatcaaagttgtatattatacaaatactctgagaatagaaaattaaatttaaaacaaa |
48695746 |
T |
|
| Q |
401 |
ccaggaagtaactatgctgaccgttgtaaacaagaaccaaaataaaatggtactgtcttctgtctgtg |
468 |
Q |
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||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48695747 |
ccaggaagtaactgtgctgaccattgtaaacaagaaccaaaataaaatggtactgtcttctgtctgtg |
48695814 |
T |
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