View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18246_low_4 (Length: 355)
Name: NF18246_low_4
Description: NF18246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18246_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 37 - 341
Target Start/End: Original strand, 9195733 - 9196035
Alignment:
| Q |
37 |
atagttgttgtgagaagtgtttaggcaaggtaattaaaacaccaaaaagtcagatgctttatgatcccgagagcaaaagaactagaaggaaaaaccgacg |
136 |
Q |
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| T |
9195733 |
atagttgttttgagaagtgtttatgcgaggtaa----aacaccaaaaagtcagatgctttatgatcccgagagcgaaaggactagaaggaaaaaccgacg |
9195828 |
T |
|
| Q |
137 |
gcaagcaaagtaacgaagacaatcgttgcaaaaaacaacaagaagcatggccaataatgcagaaacaacgacattgacgatgaacaacaa--gtctaagg |
234 |
Q |
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|||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
9195829 |
gcaagcaaagaaacgaagacagtcgttgcaaaaaacaacaagaagcatggccaataatgcagaaacaacgacattgacgatgaacaacaactgtctaagg |
9195928 |
T |
|
| Q |
235 |
agatacgcctgatcatccaagcctaaaaacaatcagcgacaaatggagatcaagacaaaagttattccacttctgcgtgtaaattcgttcactgaaatgg |
334 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |
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| T |
9195929 |
agatacgcctgatcatccaagcctaaaaacaatcagcgacaaatggagatcaagacaaaagttattcaacttctgctcgtaaattcgttcaccgaaatgg |
9196028 |
T |
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| Q |
335 |
atcatga |
341 |
Q |
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||||||| |
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| T |
9196029 |
atcatga |
9196035 |
T |
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