View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18247_low_2 (Length: 518)

Name: NF18247_low_2
Description: NF18247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18247_low_2
NF18247_low_2
[»] chr1 (71 HSPs)
chr1 (142-304)||(42227737-42227899)
chr1 (310-471)||(49318057-49318218)
chr1 (299-471)||(9347116-9347290)
chr1 (305-471)||(50615512-50615678)
chr1 (305-471)||(50623340-50623506)
chr1 (322-471)||(44911328-44911477)
chr1 (311-471)||(50526363-50526524)
chr1 (310-478)||(9347434-9347603)
chr1 (304-471)||(27172111-27172275)
chr1 (312-471)||(48104681-48104841)
chr1 (310-471)||(44911026-44911188)
chr1 (310-471)||(999414-999577)
chr1 (313-471)||(50949456-50949615)
chr1 (310-467)||(6703789-6703947)
chr1 (310-467)||(49317753-49317911)
chr1 (312-471)||(50429971-50430132)
chr1 (312-471)||(999115-999273)
chr1 (310-471)||(21687026-21687189)
chr1 (310-471)||(4692324-4692486)
chr1 (304-469)||(13918441-13918607)
chr1 (310-470)||(46824170-46824331)
chr1 (304-476)||(49318331-49318501)
chr1 (312-469)||(28634049-28634208)
chr1 (312-471)||(42611188-42611350)
chr1 (310-448)||(20480169-20480307)
chr1 (312-470)||(44224011-44224169)
chr1 (310-471)||(21687357-21687519)
chr1 (310-471)||(4692023-4692183)
chr1 (312-471)||(42611504-42611665)
chr1 (310-470)||(20371041-20371199)
chr1 (310-471)||(28633721-28633876)
chr1 (310-469)||(32162943-32163096)
chr1 (303-438)||(26814688-26814824)
chr1 (305-440)||(48105038-48105174)
chr1 (312-442)||(46823846-46823977)
chr1 (310-442)||(20371272-20371405)
chr1 (300-440)||(6703451-6703592)
chr1 (310-438)||(26815043-26815172)
chr1 (310-471)||(50429657-50429820)
chr1 (309-440)||(13918789-13918921)
chr1 (310-440)||(27172464-27172594)
chr1 (304-442)||(47498296-47498433)
chr1 (310-442)||(20480534-20480664)
chr1 (310-420)||(19008692-19008803)
chr1 (304-414)||(6002232-6002343)
chr1 (310-420)||(39691942-39692053)
chr1 (312-470)||(50949164-50949303)
chr1 (310-414)||(49284410-49284515)
chr1 (400-471)||(50615289-50615360)
chr1 (400-471)||(50623117-50623188)
chr1 (371-440)||(44223747-44223815)
chr1 (329-452)||(32162750-32162867)
chr1 (309-364)||(47498493-47498548)
chr1 (310-419)||(33085672-33085780)
chr1 (311-362)||(17518602-17518653)
chr1 (310-357)||(19007736-19007783)
chr1 (336-414)||(49285003-49285081)
chr1 (18-55)||(42227986-42228023)
chr1 (304-364)||(48190766-48190827)
chr1 (311-414)||(6002842-6002946)
chr1 (310-362)||(13589659-13589711)
chr1 (310-364)||(8108991-8109046)
chr1 (310-362)||(47955307-47955360)
chr1 (310-358)||(1176718-1176766)
chr1 (310-357)||(50615241-50615289)
chr1 (310-357)||(50623069-50623117)
chr1 (353-407)||(6712215-6712270)
chr1 (310-364)||(48191353-48191408)
chr1 (310-362)||(22149404-22149455)
chr1 (310-361)||(39690795-39690847)
chr1 (310-362)||(41083211-41083263)
[»] chr2 (42 HSPs)
chr2 (312-471)||(41790494-41790653)
chr2 (312-470)||(26692712-26692871)
chr2 (312-471)||(8851151-8851311)
chr2 (312-471)||(19141740-19141898)
chr2 (310-471)||(41790803-41790965)
chr2 (312-478)||(26692399-26692566)
chr2 (310-471)||(16910828-16910992)
chr2 (309-471)||(16911167-16911322)
chr2 (331-471)||(17851295-17851433)
chr2 (304-438)||(7664597-7664732)
chr2 (310-470)||(7979568-7979728)
chr2 (311-470)||(6325239-6325399)
chr2 (310-442)||(8851503-8851635)
chr2 (310-438)||(7664249-7664378)
chr2 (311-471)||(19141446-19141598)
chr2 (309-470)||(18750032-18750179)
chr2 (304-440)||(17850973-17851109)
chr2 (310-453)||(5379868-5380012)
chr2 (312-471)||(18749729-18749890)
chr2 (316-440)||(6324924-6325049)
chr2 (310-453)||(5378662-5378806)
chr2 (312-439)||(5793450-5793578)
chr2 (310-437)||(7979928-7980055)
chr2 (310-403)||(37720205-37720298)
chr2 (310-414)||(2639430-2639535)
chr2 (310-414)||(26841588-26841693)
chr2 (304-414)||(18296071-18296182)
chr2 (310-414)||(2638821-2638926)
chr2 (310-414)||(26842186-26842291)
chr2 (310-407)||(38490796-38490893)
chr2 (312-414)||(7591204-7591307)
chr2 (304-414)||(7591798-7591909)
chr2 (310-364)||(18296691-18296746)
chr2 (312-362)||(32673143-32673193)
chr2 (310-362)||(6171456-6171509)
chr2 (310-362)||(20347464-20347517)
chr2 (310-362)||(30190924-30190977)
chr2 (310-364)||(24832332-24832387)
chr2 (310-360)||(6171157-6171207)
chr2 (305-362)||(11883926-11883984)
chr2 (310-362)||(11883624-11883677)
chr2 (305-358)||(43495609-43495662)
[»] chr7 (48 HSPs)
chr7 (310-471)||(29292923-29293085)
chr7 (305-471)||(29293237-29293404)
chr7 (310-471)||(13744124-13744285)
chr7 (300-471)||(37888824-37888998)
chr7 (310-471)||(17156968-17157130)
chr7 (310-471)||(37972287-37972449)
chr7 (310-471)||(48359321-48359481)
chr7 (312-470)||(18863970-18864129)
chr7 (310-471)||(10533035-10533197)
chr7 (310-471)||(37889149-37889312)
chr7 (310-471)||(3204984-3205146)
chr7 (310-471)||(3204670-3204830)
chr7 (310-471)||(20419214-20419377)
chr7 (310-471)||(9035182-9035346)
chr7 (310-471)||(9034868-9035031)
chr7 (312-471)||(22740483-22740641)
chr7 (310-471)||(42418592-42418755)
chr7 (310-471)||(13741558-13741719)
chr7 (310-478)||(22740157-22740319)
chr7 (310-442)||(18864322-18864454)
chr7 (310-470)||(38826803-38826966)
chr7 (312-471)||(42418926-42419079)
chr7 (312-440)||(20418891-20419020)
chr7 (312-471)||(36527387-36527546)
chr7 (310-470)||(37971961-37972114)
chr7 (313-421)||(48359599-48359707)
chr7 (310-436)||(36527724-36527851)
chr7 (303-414)||(44599483-44599595)
chr7 (310-414)||(44600083-44600188)
chr7 (302-414)||(13863305-13863419)
chr7 (310-414)||(13863905-13864009)
chr7 (310-414)||(8643714-8643819)
chr7 (310-369)||(16198970-16199030)
chr7 (310-364)||(13772642-13772697)
chr7 (312-358)||(27096346-27096392)
chr7 (312-358)||(27181911-27181957)
chr7 (310-362)||(3687656-3687709)
chr7 (310-362)||(9412325-9412378)
chr7 (309-370)||(18925314-18925374)
chr7 (303-362)||(13772901-13772961)
chr7 (304-356)||(27096042-27096094)
chr7 (304-356)||(27182209-27182261)
chr7 (305-361)||(35079956-35080012)
chr7 (310-385)||(46816288-46816364)
chr7 (304-362)||(8953889-8953947)
chr7 (312-361)||(6908485-6908534)
chr7 (304-361)||(23686416-23686473)
chr7 (301-362)||(3687345-3687408)
[»] chr3 (43 HSPs)
chr3 (310-471)||(47666226-47666388)
chr3 (304-478)||(53688187-53688361)
chr3 (310-471)||(3353129-3353288)
chr3 (310-471)||(42672979-42673140)
chr3 (311-470)||(22429488-22429647)
chr3 (310-471)||(27238466-27238628)
chr3 (316-471)||(3353441-3353597)
chr3 (310-471)||(40848852-40849014)
chr3 (310-471)||(47665912-47666074)
chr3 (310-471)||(26007183-26007344)
chr3 (310-471)||(40848522-40848679)
chr3 (304-471)||(48160224-48160392)
chr3 (310-471)||(53687889-53688050)
chr3 (303-471)||(27238799-27238960)
chr3 (310-470)||(36180557-36180716)
chr3 (304-469)||(24485349-24485518)
chr3 (303-420)||(42673238-42673355)
chr3 (310-470)||(44007968-44008129)
chr3 (304-440)||(10348721-10348858)
chr3 (310-478)||(22429159-22429321)
chr3 (310-418)||(48159898-48160007)
chr3 (312-442)||(24485025-24485155)
chr3 (304-471)||(10348474-10348643)
chr3 (304-478)||(44008292-44008459)
chr3 (312-471)||(26007518-26007670)
chr3 (312-442)||(53766166-53766296)
chr3 (305-437)||(42456121-42456251)
chr3 (310-440)||(36180912-36181043)
chr3 (310-471)||(21896404-21896563)
chr3 (310-419)||(8314014-8314124)
chr3 (386-471)||(53766482-53766566)
chr3 (391-470)||(42455852-42455931)
chr3 (312-409)||(1928387-1928484)
chr3 (310-362)||(47871122-47871174)
chr3 (310-361)||(8315083-8315134)
chr3 (310-362)||(20969019-20969072)
chr3 (310-364)||(21895658-21895714)
chr3 (302-362)||(17372594-17372653)
chr3 (310-357)||(42455791-42455839)
chr3 (310-358)||(42627550-42627598)
chr3 (310-369)||(53766572-53766632)
chr3 (310-362)||(17372299-17372352)
chr3 (312-364)||(14015962-14016014)
[»] chr4 (51 HSPs)
chr4 (310-471)||(26207362-26207523)
chr4 (310-471)||(23539842-23540002)
chr4 (304-478)||(32703533-32703709)
chr4 (310-471)||(28196663-28196826)
chr4 (310-471)||(9380308-9380470)
chr4 (310-471)||(28196347-28196509)
chr4 (310-466)||(26207642-26207799)
chr4 (310-474)||(39086509-39086676)
chr4 (305-471)||(169330-169497)
chr4 (310-471)||(9023245-9023407)
chr4 (310-471)||(48405963-48406125)
chr4 (323-471)||(25162204-25162352)
chr4 (310-471)||(32703226-32703388)
chr4 (310-470)||(39744356-39744518)
chr4 (310-470)||(23540144-23540305)
chr4 (312-471)||(48406276-48406435)
chr4 (310-468)||(169014-169175)
chr4 (310-471)||(292783-292945)
chr4 (310-455)||(4239273-4239419)
chr4 (308-440)||(25161877-25162010)
chr4 (310-440)||(9380663-9380794)
chr4 (305-439)||(43292033-43292168)
chr4 (310-471)||(43292250-43292410)
chr4 (310-478)||(293108-293270)
chr4 (303-471)||(39912378-39912546)
chr4 (310-420)||(9023622-9023733)
chr4 (310-420)||(39744031-39744142)
chr4 (312-439)||(12758127-12758254)
chr4 (323-418)||(44468867-44468962)
chr4 (312-470)||(12757770-12757929)
chr4 (310-414)||(50678780-50678885)
chr4 (310-414)||(36095818-36095922)
chr4 (310-414)||(43051200-43051305)
chr4 (310-414)||(50679372-50679477)
chr4 (312-414)||(36096423-36096526)
chr4 (310-420)||(39912055-39912164)
chr4 (307-386)||(11529166-11529246)
chr4 (310-409)||(56505694-56505794)
chr4 (312-414)||(43050610-43050713)
chr4 (310-364)||(11241659-11241713)
chr4 (310-362)||(3930480-3930532)
chr4 (307-362)||(22681573-22681628)
chr4 (310-414)||(45830145-45830249)
chr4 (310-364)||(16555815-16555870)
chr4 (310-364)||(24775781-24775836)
chr4 (310-362)||(8181992-8182046)
chr4 (313-362)||(49178816-49178866)
chr4 (310-362)||(18077202-18077255)
chr4 (310-414)||(56506522-56506627)
chr4 (310-362)||(35393776-35393828)
chr4 (310-361)||(54508816-54508868)
[»] chr5 (48 HSPs)
chr5 (310-471)||(12498568-12498730)
chr5 (310-470)||(22729332-22729492)
chr5 (312-478)||(3888546-3888713)
chr5 (310-471)||(12498816-12498981)
chr5 (312-470)||(41072106-41072264)
chr5 (310-471)||(19514526-19514690)
chr5 (310-470)||(26571057-26571217)
chr5 (310-471)||(3888240-3888402)
chr5 (312-471)||(2817152-2817312)
chr5 (310-471)||(43464091-43464244)
chr5 (310-470)||(34147142-34147302)
chr5 (312-440)||(21207229-21207358)
chr5 (310-470)||(37610203-37610353)
chr5 (311-471)||(2817467-2817626)
chr5 (310-470)||(34147404-34147563)
chr5 (310-440)||(19514885-19515016)
chr5 (310-470)||(37780321-37780472)
chr5 (302-437)||(37610544-37610678)
chr5 (310-471)||(26570730-26570884)
chr5 (312-416)||(43463759-43463863)
chr5 (312-442)||(10098861-10098991)
chr5 (310-440)||(22729009-22729138)
chr5 (302-442)||(37780664-37780803)
chr5 (312-440)||(11316896-11317025)
chr5 (310-420)||(25940522-25940633)
chr5 (304-419)||(25940956-25941073)
chr5 (372-470)||(25940856-25940955)
chr5 (310-470)||(10098520-10098667)
chr5 (312-470)||(30401885-30402039)
chr5 (310-414)||(18817559-18817664)
chr5 (310-421)||(42919306-42919417)
chr5 (312-406)||(11316717-11316812)
chr5 (301-414)||(18816944-18817058)
chr5 (312-407)||(11351383-11351478)
chr5 (310-407)||(11350809-11350906)
chr5 (310-364)||(34577162-34577216)
chr5 (310-362)||(25115758-25115811)
chr5 (310-362)||(25174850-25174903)
chr5 (312-385)||(31569910-31569983)
chr5 (310-364)||(22428935-22428989)
chr5 (310-364)||(22429194-22429248)
chr5 (310-362)||(41383167-41383219)
chr5 (310-364)||(18433016-18433071)
chr5 (310-364)||(26020451-26020506)
chr5 (302-358)||(16466746-16466804)
chr5 (304-361)||(23011074-23011131)
chr5 (310-362)||(33324838-33324891)
chr5 (312-364)||(34576870-34576922)
[»] chr6 (27 HSPs)
chr6 (310-470)||(29074264-29074424)
chr6 (310-470)||(29079028-29079188)
chr6 (310-470)||(29106837-29106997)
chr6 (310-471)||(33974189-33974352)
chr6 (305-471)||(2354405-2354571)
chr6 (310-471)||(7654439-7654601)
chr6 (310-471)||(10087750-10087911)
chr6 (312-470)||(32733888-32734047)
chr6 (310-471)||(2354702-2354863)
chr6 (309-471)||(22754981-22755143)
chr6 (304-440)||(22684280-22684416)
chr6 (304-440)||(22754652-22754788)
chr6 (303-470)||(13176614-13176781)
chr6 (310-434)||(13176984-13177108)
chr6 (322-442)||(32733571-32733691)
chr6 (299-414)||(33828980-33829096)
chr6 (310-414)||(33829584-33829689)
chr6 (312-362)||(3825530-3825580)
chr6 (310-362)||(10039677-10039729)
chr6 (310-362)||(13579651-13579703)
chr6 (312-437)||(33973867-33973991)
chr6 (310-362)||(21031980-21032032)
chr6 (310-364)||(3403718-3403773)
chr6 (310-362)||(3403989-3404042)
chr6 (310-362)||(23250593-23250645)
chr6 (310-358)||(30388063-30388111)
chr6 (312-364)||(31598726-31598778)
[»] scaffold0017 (2 HSPs)
scaffold0017 (310-476)||(185160-185327)
scaffold0017 (304-440)||(184834-184971)
[»] chr8 (45 HSPs)
chr8 (310-471)||(41662522-41662685)
chr8 (310-471)||(24473659-24473821)
chr8 (310-465)||(37396709-37396865)
chr8 (304-471)||(24473338-24473506)
chr8 (310-471)||(34498446-34498608)
chr8 (310-478)||(6198979-6199149)
chr8 (310-470)||(9623503-9623664)
chr8 (310-470)||(16169499-16169660)
chr8 (304-471)||(37397044-37397204)
chr8 (311-471)||(15444213-15444374)
chr8 (310-440)||(17431288-17431419)
chr8 (310-439)||(20861561-20861691)
chr8 (312-442)||(34498125-34498255)
chr8 (304-478)||(16169169-16169336)
chr8 (312-440)||(15444569-15444698)
chr8 (312-437)||(25439052-25439176)
chr8 (310-471)||(6198659-6198814)
chr8 (331-440)||(33727027-33727136)
chr8 (377-470)||(33726734-33726827)
chr8 (310-414)||(2856527-2856632)
chr8 (304-414)||(39723996-39724107)
chr8 (311-420)||(15442765-15442875)
chr8 (310-414)||(9823309-9823414)
chr8 (298-414)||(13027229-13027346)
chr8 (310-414)||(13936724-13936827)
chr8 (310-414)||(13026636-13026741)
chr8 (304-414)||(9822743-9822854)
chr8 (312-414)||(15042148-15042251)
chr8 (304-414)||(22851385-22851496)
chr8 (311-369)||(25438794-25438853)
chr8 (310-364)||(9623880-9623934)
chr8 (310-409)||(13937342-13937442)
chr8 (336-414)||(39723430-39723508)
chr8 (305-414)||(3307334-3307444)
chr8 (310-360)||(43162235-43162285)
chr8 (310-362)||(41662403-41662456)
chr8 (310-362)||(43246176-43246229)
chr8 (311-362)||(765736-765788)
chr8 (310-360)||(12281125-12281176)
chr8 (311-357)||(33726696-33726743)
chr8 (310-364)||(37752085-37752140)
chr8 (310-362)||(15156185-15156238)
chr8 (310-362)||(16929242-16929295)
chr8 (313-362)||(43162539-43162588)
chr8 (310-361)||(3463946-3463998)
[»] scaffold0041 (2 HSPs)
scaffold0041 (310-478)||(38579-38748)
scaffold0041 (341-471)||(38284-38414)
[»] scaffold0460 (2 HSPs)
scaffold0460 (310-470)||(331-492)
scaffold0460 (310-442)||(685-815)
[»] scaffold0029 (3 HSPs)
scaffold0029 (310-471)||(9906-10069)
scaffold0029 (378-471)||(10239-10332)
scaffold0029 (310-361)||(10320-10370)
[»] scaffold0069 (2 HSPs)
scaffold0069 (310-470)||(50076-50234)
scaffold0069 (310-442)||(50426-50559)
[»] scaffold0176 (2 HSPs)
scaffold0176 (310-440)||(19622-19752)
scaffold0176 (310-470)||(19935-20096)
[»] scaffold0328 (2 HSPs)
scaffold0328 (310-414)||(6743-6848)
scaffold0328 (310-414)||(6153-6258)
[»] scaffold0110 (2 HSPs)
scaffold0110 (310-362)||(45807-45859)
scaffold0110 (310-359)||(45538-45587)
[»] scaffold1221 (1 HSPs)
scaffold1221 (305-364)||(1507-1566)
[»] scaffold0319 (2 HSPs)
scaffold0319 (310-362)||(6697-6749)
scaffold0319 (310-362)||(6395-6448)
[»] scaffold0802 (1 HSPs)
scaffold0802 (310-362)||(1420-1473)
[»] scaffold0002 (1 HSPs)
scaffold0002 (310-362)||(411924-411976)
[»] scaffold0376 (2 HSPs)
scaffold0376 (310-369)||(7456-7515)
scaffold0376 (310-362)||(7600-7652)
[»] scaffold0015 (1 HSPs)
scaffold0015 (310-360)||(17158-17208)
[»] scaffold0001 (2 HSPs)
scaffold0001 (305-362)||(438926-438984)
scaffold0001 (312-361)||(183367-183416)
[»] scaffold0192 (1 HSPs)
scaffold0192 (310-362)||(25369-25422)
[»] scaffold0598 (1 HSPs)
scaffold0598 (309-361)||(6877-6928)
[»] scaffold0009 (1 HSPs)
scaffold0009 (310-362)||(205688-205740)


Alignment Details
Target: chr1 (Bit Score: 151; Significance: 1e-79; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 142 - 304
Target Start/End: Complemental strand, 42227899 - 42227737
Alignment:
Q  142 ggactctttcttagaataagagaacttgctacaatccaacttacgagaactaaaacaagcttacaagtttacgtgcttgtttggttccgcatcttcttag 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42227899 ggactctttcttagaataagagaacttgctacaatccaacttacgagaactaaaacaagcttacaagtttacgtgcttgtttggttccgcatcttcttag 42227800  T
Q  242 ttcggaagcaacaatgttggatttttatccttttcgatttgatgaatctgattgagtttatat 304  Q
    |||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  42227799 ttcggaagcaacaacgtaggttttttatccttttcgatttgatgaatctgattgagtttatat 42227737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 49318218 - 49318057
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  49318218 gcttaattgcactttcccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttct 49318119  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     |||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  49318118 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgc 49318057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 299 - 471
Target Start/End: Original strand, 9347116 - 9347290
Alignment:
Q  299 ttatatttttagcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatactt 397  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||    
T  9347116 ttatatttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtt 9347215  T
Q  398 ttccccctttctaattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtgc 471  Q
    |||||||||||| ||||||||||   |||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  9347216 ttccccctttctgattttatggtccgcatgacatttagcgctgatgtgtctgtttttttatcaattaatgtgtgc 9347290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 305 - 471
Target Start/End: Complemental strand, 50615678 - 50615512
Alignment:
Q  305 ttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccc 404  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||||| |||||||||    
T  50615678 ttttggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccc 50615579  T
Q  405 tttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||| ||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||    
T  50615578 tttctgattttatggtccccatgacatttagtgctgatgcgtctgttttttatcaattaatgtgtgc 50615512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 305 - 471
Target Start/End: Complemental strand, 50623506 - 50623340
Alignment:
Q  305 ttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccc 404  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||||| |||||||||    
T  50623506 ttttggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccc 50623407  T
Q  405 tttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||| ||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||    
T  50623406 tttctgattttatggtccccatgacatttagtgctgatgcgtctgttttttatcaattaatgtgtgc 50623340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 322 - 471
Target Start/End: Complemental strand, 44911477 - 44911328
Alignment:
Q  322 ttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaattttatggtt 421  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||    
T  44911477 ttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctatagttttcctcctttctgattttatggtt 44911378  T
Q  422 ttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  44911377 ctcatgacatttaatgctgatgtgtctgttatttatcaattaatgtgtgc 44911328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 311 - 471
Target Start/End: Complemental strand, 50526524 - 50526363
Alignment:
Q  311 cttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 50526425  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     ||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50526424 gattttatggtccacatgacatttaatgctgatgtgtctgttttttatcaattaatgtgtgc 50526363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 310 - 478
Target Start/End: Complemental strand, 9347603 - 9347434
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  9347603 gcttaattgcactttcccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 9347504  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtct-gttttttatcaattaatgtgtgctacatgt 478  Q
     |||||||||||  |||||||||||||| ||||||||||  |||||||||||||||||||||| ||||||    
T  9347503 gattttatggttcccatgacatttagtgttgatgtgtctatttttttatcaattaatgtgtgccacatgt 9347434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 304 - 471
Target Start/End: Original strand, 27172111 - 27172275
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  27172111 tttttggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccc 27172210  T
Q  404 ctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    |||||| |||||||| ||  ||||||||||||   || ||||||||||||||||||||||||||||||    
T  27172211 ctttctgattttatgcttcccatgacatttag---tgttgtgtctgttttttatcaattaatgtgtgc 27172275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 312 - 471
Target Start/End: Original strand, 48104681 - 48104841
Alignment:
Q  312 ttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||     
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 48104780  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48104781 attttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgc 48104841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 44911026 - 44911188
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44911026 gcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 44911125  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | |||||||||||  ||||| |||||||| ||||||||||||| |||||||||||||| ||||    
T  44911126 tgattttatggttcccatgatatttagtgttgatgtgtctgttatttatcaattaatgcgtgc 44911188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 999577 - 999414
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  999577 gcttaattgcacttttccccctatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctatagttttccccctttct 999478  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgtt--ttttatcaattaatgtgtgc 471  Q
     ||||||||||   |||||||||||||||||||| |||||||  ||||||||||||||||||||    
T  999477 gattttatggtccccatgacatttagtgctgatgcgtctgttttttttatcaattaatgtgtgc 999414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 313 - 471
Target Start/End: Complemental strand, 50949615 - 50949456
Alignment:
Q  313 taattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    |||||||||||| ||||| ||||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||||| |||| ||||||||| |    
T  50949615 taattgcactttccccccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccctatagtttttcccctttctga 50949516  T
Q  412 ttttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    |||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||    
T  50949515 ttttatggttctcatgacatttagtgctgatgtgtgtgttatttatcaattaatgtgtgc 50949456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 310 - 467
Target Start/End: Complemental strand, 6703947 - 6703789
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||| | |||| |||||||||||||    
T  6703947 gcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgcctcatatagttttccccctttc 6703848  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgt 467  Q
    | ||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  6703847 tgattttatggtcctcatgacatttagtgctgatatgtctgttttttatcaattaatgt 6703789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 310 - 467
Target Start/End: Original strand, 49317753 - 49317911
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||| |||||||||||||| ||||||||| ||||||||||||||    
T  49317753 gcttaattgcacttttccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctatagttttccccctttct 49317852  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgt 467  Q
     ||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||    
T  49317853 gattttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaatgt 49317911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 312 - 471
Target Start/End: Complemental strand, 50430132 - 50429971
Alignment:
Q  312 ttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||     
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctg 50430033  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgtt-ttttatcaattaatgtgtgc 471  Q
    ||||||||||   ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  50430032 attttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgc 50429971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 312 - 471
Target Start/End: Original strand, 999115 - 999273
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| |||| | ||||||| |    
T  999115 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt-ctcctttctga 999213  T
Q  412 ttttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||||||| | |||||||||||||| | |||||||||||||||||||||||||||||||    
T  999214 ttttatggtctccatgacatttagtgttaatgtgtctgttttttatcaattaatgtgtgc 999273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 21687026 - 21687189
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||||||| |||||| ||||||    
T  21687026 gcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcctttc 21687125  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  21687126 tgattttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgc 21687189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 4692486 - 4692324
Alignment:
Q  310 gcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||| |||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||| || |||||| |||| ||||||||    
T  4692486 gcttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttacctcctatagtttttcccctttc 4692387  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4692386 tgattttatggtccccatgacatttagtgctgatgtgtctattttttatcaattaatgtgtgc 4692324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 304 - 469
Target Start/End: Original strand, 13918441 - 13918607
Alignment:
Q  304 tttttagcttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  13918441 tttttggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccc 13918540  T
Q  403 cctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgt 469  Q
    ||||||| ||||||||||    ||||||||||||| | || ||||||||||||||||||||||||||    
T  13918541 cctttctgattttatggtcactatgacatttagtgtttatatgtctgttttttatcaattaatgtgt 13918607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 46824331 - 46824170
Alignment:
Q  310 gcttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||| || ||||||||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||     
T  46824331 gcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttt 46824232  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    | ||||||||||   ||||||||||||||||||  |||||||||||||||||||||||||||    
T  46824231 tgattttatggtccccatgacatttagtgctgaaatgtctgttttttatcaattaatgtgtg 46824170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 304 - 476
Target Start/End: Complemental strand, 49318501 - 49318331
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    ||||| ||||||||||| |||||||||||||||||  |||||||| ||||||||| ||||| |||| ||||||||||||||  |||||||| |||||||     
T  49318501 tttttggcttaattgcatttttccccctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgattttatcccctatagttttccc- 49318403  T
Q  404 ctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgctacat 476  Q
     ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49318402 -tttctgattttatggttcccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacat 49318331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 312 - 469
Target Start/End: Complemental strand, 28634208 - 28634049
Alignment:
Q  312 ttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||||     
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctttctg 28634109  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgtt-ttttatcaattaatgtgt 469  Q
    ||||||||||   ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  28634108 attttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgt 28634049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 312 - 471
Target Start/End: Original strand, 42611188 - 42611350
Alignment:
Q  312 ttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||| |||||| ||||||||||||||     
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgcctcctatagttttccccctttctg 42611287  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctg--ttttttatcaattaatgtgtgc 471  Q
    |||||||||||  |||||||||||||| |||||||||||  |||||||||||||||| |||||    
T  42611288 attttatggttcccatgacatttagtgttgatgtgtctgttttttttatcaattaatatgtgc 42611350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 310 - 448
Target Start/End: Original strand, 20480169 - 20480307
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  20480169 gcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 20480268  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtct 448  Q
     ||||||||||   ||||||||||||||||||| |||||    
T  20480269 gattttatggtccccatgacatttagtgctgatatgtct 20480307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 312 - 470
Target Start/End: Complemental strand, 44224169 - 44224011
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    ||||||||||||| |||| | |||||| ||||||||||||||||||| ||||| |||| ||||||||||||||| |||||||| |||| ||||||||| |    
T  44224169 ttaattgcactttgccccatgtagtttaccaattgtgtgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttacccctttctga 44224070  T
Q  412 ttttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    |||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||    
T  44224069 ttttatggtccttatgacatttagtgctgatatgtctgttttttatcaattaatgtgtg 44224011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 21687519 - 21687357
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||||||| ||| ||| |||| |||||||||||||| ||| || || ||||||||||||||    
T  21687519 gcttaatagcacttttccccctataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttttccctctgtagttttccccctttct 21687420  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgtt-ttttatcaattaatgtgtgc 471  Q
     ||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21687419 gattttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaatgtgtgc 21687357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 4692023 - 4692183
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||  || ||||||||||| ||||||  ||||||||| || || ||||||||||||| ||||||||||||||| ||| ||||||||||    
T  4692023 gcttaattgcactttctcctctatagtttgctaattgtacgattttgcatcctatagtttaaaacgagccattttgccccctatagttt-ccccctttct 4692121  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     |||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  4692122 gattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgc 4692183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 312 - 471
Target Start/End: Complemental strand, 42611665 - 42611504
Alignment:
Q  312 ttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||| |||| |||| ||||||||||||||||||| |||| |||||||||     
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctatagtttttcccctttctg 42611566  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgtt-ttttatcaattaatgtgtgc 471  Q
    ||||||||||   ||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  42611565 attttatggtccccataacatttagtgctgatgtgtctgtttttttatcaattaatgtgtgc 42611504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 20371041 - 20371199
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||| |||| ||||||||||||||||||||| || |||| |||||||||    
T  20371041 gcttaattgcacttt-ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctgtagtttt-cccctttct 20371138  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
     ||||||||||    |||||||||||||||||| |||||||||||||||||||||||||||    
T  20371139 gattttatggtccctatgacatttagtgctgatatgtctgttttttatcaattaatgtgtg 20371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 28633721 - 28633876
Alignment:
Q  310 gcttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  28633721 gcttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 28633820  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | |||||||||||  ||||||||||||||||| |       ||||||||||||||||||||||    
T  28633821 tgattttatggttcccatgacatttagtgctggt-------ttttttatcaattaatgtgtgc 28633876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 469
Target Start/End: Complemental strand, 32163096 - 32162943
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||    
T  32163096 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccttatagttttccccctttc 32162997  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgt 469  Q
    | ||||||||||   |||||||||||||||||||       ||||||||||||||||||||    
T  32162996 tgattttatggtccccatgacatttagtgctgat-------ttttttatcaattaatgtgt 32162943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 303 - 438
Target Start/End: Original strand, 26814688 - 26814824
Alignment:
Q  303 atttttagcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcc 401  Q
    |||||| |||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  26814688 atttttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcc 26814787  T
Q  402 ccctttctaattttatggttttcatgacatttagtgc 438  Q
    |||||||| ||||||||||   |||||||||||||||    
T  26814788 ccctttctgattttatggtccccatgacatttagtgc 26814824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 305 - 440
Target Start/End: Complemental strand, 48105174 - 48105038
Alignment:
Q  305 ttttagcttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    |||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  48105174 ttttggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccc 48105075  T
Q  404 ctttctaattttatggttttcatgacatttagtgctg 440  Q
    |||||| ||||||||||   ||||| |||||||||||    
T  48105074 ctttctgattttatggtccccatgatatttagtgctg 48105038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 312 - 442
Target Start/End: Original strand, 46823846 - 46823977
Alignment:
Q  312 ttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||| |||||||||||||||||||||||| ||||||||||||||     
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctg 46823945  T
Q  411 attttatggttttcatgacatttagtgctgat 442  Q
    ||||||||||   |||||||||||||| ||||    
T  46823946 attttatggtacccatgacatttagtgttgat 46823977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 310 - 442
Target Start/End: Complemental strand, 20371405 - 20371272
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgca-ccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||| |||||||| ||||||||||||||| ||| |||||||||    
T  20371405 gcttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctttc 20371306  T
Q  409 taattttatggttttcatgacatttagtgctgat 442  Q
    | ||||||||||   ||||||||||| |||||||    
T  20371305 tgattttatggtccccatgacatttaatgctgat 20371272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 300 - 440
Target Start/End: Original strand, 6703451 - 6703592
Alignment:
Q  300 tatatttttagcttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttt 398  Q
    ||||||||  |||||||||||||||| || |||||||||| ||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||| |||    
T  6703451 tatattttaggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttt 6703550  T
Q  399 tccccctttctaattttatggttttcatgacatttagtgctg 440  Q
    ||||| ||||| ||||||||||   |||||||||||||||||    
T  6703551 tccccttttctgattttatggtccccatgacatttagtgctg 6703592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 310 - 438
Target Start/End: Complemental strand, 26815172 - 26815043
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| ||||||||  |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  26815172 gcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctttc 26815073  T
Q  409 taattttatggttttcatgacatttagtgc 438  Q
    | ||||||||||   ||||| |||||||||    
T  26815072 tgattttatggtccccatgatatttagtgc 26815043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 50429657 - 50429820
Alignment:
Q  310 gcttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||| |||||||||| | ||| ||||| ||||||| ||||||||||| ||| |||| |||||||||||||||||||||||| |||||  ||||||    
T  50429657 gcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcatcctttc 50429756  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctg--ttttttatcaattaatgtgtgc 471  Q
    | ||||||||| |  ||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  50429757 tgattttatgg-tcccatgacatttagtgctgatgtgtctgttttttttatcaattaacgtgtgc 50429820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 309 - 440
Target Start/End: Complemental strand, 13918921 - 13918789
Alignment:
Q  309 agcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccccttt 407  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| |||| |||||| ||||||||||||||||| ||||||||| ||    
T  13918921 agcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccctatagttttcccccctt 13918822  T
Q  408 ctaattttatggttttcatgacatttagtgctg 440  Q
     | ||||||||||   |||||||||||||||||    
T  13918821 ttgattttatggtccccatgacatttagtgctg 13918789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 310 - 440
Target Start/End: Complemental strand, 27172594 - 27172464
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| | || ||||||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  27172594 gcttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttg-cccctatagttttccccctttc 27172496  T
Q  409 taattttatggttttcatgacatttagtgctg 440  Q
    | ||||||||||   |||||||||||||||||    
T  27172495 tgattttatggtccccatgacatttagtgctg 27172464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 304 - 442
Target Start/End: Original strand, 47498296 - 47498433
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||  |||||||| ||||| |||| |||| ||||||||||||| ||||| ||||| ||    
T  47498296 tttttggcttaattgcacttt-ccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttgccctctatagttttctcc 47498394  T
Q  404 ctttctaattttatggttttcatgacatttagtgctgat 442  Q
    |||| | |||||||||| | |||||||||||||||||||    
T  47498395 ctttttgattttatggtctccatgacatttagtgctgat 47498433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 310 - 442
Target Start/End: Complemental strand, 20480664 - 20480534
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||| |||||||||||||  ||||||||| | || |||||||||    
T  20480664 gcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt--ccccctatagtgtttcccctttct 20480567  T
Q  410 aattttatggttttcatgacatttagtgctgat 442  Q
     ||||||||||   ||||||||||| |||||||    
T  20480566 gattttatggtccccatgacatttaatgctgat 20480534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 310 - 420
Target Start/End: Complemental strand, 19008803 - 19008692
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| ||||||||  |||||||| ||||||||||||||| |||||||||| || ||||||||||||||| |||||||||||||    
T  19008803 gcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctataattttccccctttc 19008704  T
Q  409 taattttatggt 420  Q
    | |||| |||||    
T  19008703 tgatttgatggt 19008692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 304 - 414
Target Start/End: Original strand, 6002232 - 6002343
Alignment:
Q  304 tttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| ||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||    
T  6002232 tttttggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccc 6002331  T
Q  403 cctttctaattt 414  Q
    ||||||| ||||    
T  6002332 cctttctgattt 6002343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 310 - 420
Target Start/End: Complemental strand, 39692053 - 39691942
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||| |||| |||||||| |||||||||||||||  ||| ||||| | |||||||| ||||||  |||||||||||||    
T  39692053 gcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctatctttttccccctttc 39691954  T
Q  409 taattttatggt 420  Q
    | ||||||||||    
T  39691953 tgattttatggt 39691942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 312 - 470
Target Start/End: Original strand, 50949164 - 50949303
Alignment:
Q  312 ttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    ||||||| ||||||||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |||                    |     
T  50949164 ttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgattttaccc--------------------tg 50949243  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50949244 attttatggttctcatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtg 50949303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 310 - 414
Target Start/End: Original strand, 49284410 - 49284515
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  49284410 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 49284509  T
Q  409 taattt 414  Q
    | ||||    
T  49284510 tgattt 49284515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 50615289 - 50615360
Alignment:
Q  400 ccccctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    |||||||||| ||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  50615289 ccccctttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatatgtgc 50615360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 50623117 - 50623188
Alignment:
Q  400 ccccctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    |||||||||| ||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  50623117 ccccctttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatatgtgc 50623188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 371 - 440
Target Start/End: Original strand, 44223747 - 44223815
Alignment:
Q  371 aaacgagcgattttgccccctatacttttccccctttctaattttatggttttcatgacatttagtgctg 440  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||||||| | ||||||||||||||||||    
T  44223747 aaacgagcgattttgccccctatagtttttcccctttctgattttatgg-tctcatgacatttagtgctg 44223815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 329 - 452
Target Start/End: Original strand, 32162750 - 32162867
Alignment:
Q  329 cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaattttatggttttcatga 428  Q
    ||||||||||||||||||||  |||||||||||||| |||| |||||||| ||     |||||||| |||| ||||||||| ||||||||||   |||||    
T  32162750 cctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagc-at-----cccctatagtttttcccctttctgattttatggtccccatga 32162843  T
Q  429 catttagtgctgatgtgtctgttt 452  Q
    |||||| ||||||| ||| |||||    
T  32162844 catttaatgctgatatgtttgttt 32162867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 47498548 - 47498493
Alignment:
Q  309 agcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  47498548 agcttaattgcacttttccccctatagtttgtcaattgtgcggttttgcaccccat 47498493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 419
Target Start/End: Original strand, 33085672 - 33085780
Alignment:
Q  310 gcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||| |||||||| ||||||| |||| ||||||| ||||||||||||||| ||||| |||||| ||||||||| ||  || ||||||| ||||||    
T  33085672 gcttaattgtacttttccaccctatattttgtcaattgtttgattttgcacccca-tgttt-aaacgaacgattttgcacctcatccttttcctcctttc 33085769  T
Q  409 taattttatgg 419  Q
    | |||||||||    
T  33085770 tgattttatgg 33085780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 362
Target Start/End: Complemental strand, 17518653 - 17518602
Alignment:
Q  311 cttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  17518653 cttaattgcacttttccccctatcttttgccaattgtgcgattttgcacccc 17518602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 19007736 - 19007783
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgc 357  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19007736 gcttaattgcactttcccccctatagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 336 - 414
Target Start/End: Complemental strand, 49285081 - 49285003
Alignment:
Q  336 tttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaattt 414  Q
    ||||||||||||| |||||||||||||||  ||| |||| ||||||||||| ||| ||  |||||||||||||| ||||    
T  49285081 tttgccaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttccccctttctgattt 49285003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 42228023 - 42227986
Alignment:
Q  18 ttccctacattttttattaacaaactcagtttacgaag 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42228023 ttccctacattttttattaacaaactcagtttacgaag 42227986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 48190766 - 48190827
Alignment:
Q  304 tttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||| ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||    
T  48190766 tttttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 48190827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 414
Target Start/End: Complemental strand, 6002946 - 6002842
Alignment:
Q  311 cttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||||  ||||||  |||  |||||||| |||||||||||||||  ||| |||||||||||||||| ||  ||  ||||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatctttttccccctttct 6002847  T
Q  410 aattt 414  Q
     ||||    
T  6002846 gattt 6002842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 13589711 - 13589659
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||||||  ||||| ||||||| |||||||||||||    
T  13589711 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 13589659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 8109046 - 8108991
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||    
T  8109046 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccat 8108991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 47955307 - 47955360
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  47955307 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 47955360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 1176718 - 1176766
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgca 358  Q
    ||||||||||||||| ||||||||| ||||| ||||||| |||||||||    
T  1176718 gcttaattgcactttcccccctatattttgctaattgtgcgattttgca 1176766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 50615241 - 50615289
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgc 357  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||||    
T  50615241 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 50623069 - 50623117
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgc 357  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||||    
T  50623069 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 407
Target Start/End: Original strand, 6712215 - 6712270
Alignment:
Q  353 tttgcaccccattgtttaaaacgagcgatttt-gccccctatacttttcccccttt 407  Q
    |||||||||||| |||| ||||||||||||||  ||||||||| ||||||||||||    
T  6712215 tttgcaccccatagttttaaacgagcgattttatccccctatagttttcccccttt 6712270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 48191408 - 48191353
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||||||| |||||||  ||||||||| ||| |||||||||||||||    
T  48191408 gcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcaccccat 48191353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 22149404 - 22149455
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||||||  ||||  ||||||| |||||||||||||    
T  22149404 gcttaattgcacttttccccctat-ctttggtaattgtgcgattttgcacccc 22149455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 39690795 - 39690847
Alignment:
Q  310 gcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccc 361  Q
    ||||| |||||||||| ||||||||| || |||||||||| ||||||||||||    
T  39690795 gcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 41083263 - 41083211
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||||||  ||||  | ||||| |||||||||||||    
T  41083263 gcttaattgcacttttccccctatcttttgttagttgtgcgattttgcacccc 41083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 312 - 471
Target Start/End: Original strand, 41790494 - 41790653
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |    
T  41790494 ttaattgcatttttccccctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctga 41790593  T
Q  412 ttttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  41790594 ttttatggttctcatgacatttaatgctgatgtgtctgttatttatcaattaatgtgtgc 41790653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 312 - 470
Target Start/End: Complemental strand, 26692871 - 26692712
Alignment:
Q  312 ttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||     
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 26692772  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  26692771 attttatggtccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 26692712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 312 - 471
Target Start/End: Original strand, 8851151 - 8851311
Alignment:
Q  312 ttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||     
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 8851250  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||||||||   |||||||||||||| |||| ||||||||||||||||||||||||||||    
T  8851251 attttatggtccccatgacatttagtgttgatatgtctgttttttatcaattaatgtgtgc 8851311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 312 - 471
Target Start/End: Complemental strand, 19141898 - 19141740
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |    
T  19141898 ttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttctga 19141800  T
Q  412 ttttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||||||||  ||||||||||||||||||||||| | || ||||||||||||| |||||    
T  19141799 ttttatggttcccatgacatttagtgctgatgtgtttattatttatcaattaatatgtgc 19141740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 41790965 - 41790803
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  41790965 gcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctatagttttccctctttc 41790866  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | |||||||||||  ||||| |||||||| ||||||||||||| |||||||||||||| ||||    
T  41790865 tgattttatggttcccatgatatttagtgttgatgtgtctgttatttatcaattaatgcgtgc 41790803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 312 - 478
Target Start/End: Original strand, 26692399 - 26692566
Alignment:
Q  312 ttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||| ||| |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||| ||||||| |||| |||||||||     
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctataatttttcccctttctg 26692498  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgctacatgt 478  Q
    ||||||||||   || |||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  26692499 attttatggtccccaagacatttattgctgatgtgtctgttttttatcaattaatgtgtgccacatgt 26692566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 16910828 - 16910992
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| ||||| |||||| ||||||    
T  16910828 gcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttcctcctttc 16910927  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctg--ttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   |||||||||||||| |||| ||||||  ||||||||||||||||||||||    
T  16910928 tgattttatggtccccatgacatttagtgttgatatgtctgttttttttatcaattaatgtgtgc 16910992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 309 - 471
Target Start/End: Complemental strand, 16911322 - 16911167
Alignment:
Q  309 agcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||||||    
T  16911322 agcttaattgcactttcgcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttc 16911223  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | |||||||||| | | ||||||||||||||| |       ||||||||||||||||||||||    
T  16911222 tgattttatggtctccgtgacatttagtgctggt-------ttttttatcaattaatgtgtgc 16911167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 331 - 471
Target Start/End: Complemental strand, 17851433 - 17851295
Alignment:
Q  331 tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaattttatggttttcatgaca 430  Q
    |||||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||||||| |||||||||||||| ||||||||| |  |||||||    
T  17851433 tatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatgg-tcccatgaca 17851335  T
Q  431 tttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  17851334 tttagtgctgatatgtctg-tttttatcaattaatgtgtgc 17851295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 7664732 - 7664597
Alignment:
Q  304 tttttagcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  7664732 tttttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccc 7664633  T
Q  403 cctttctaattttatggttttcatgacatttagtgc 438  Q
    ||||||| ||||||||||   |||||||||||||||    
T  7664632 cctttctgattttatggtccccatgacatttagtgc 7664597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 7979568 - 7979728
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||| ||||||||||||||  ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||    
T  7979568 gctttattgcacttttccct-tatagtttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctctttct 7979666  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtg 470  Q
     |||||||| |    |||||||||||||||||| |||||| |||||||||||||||||||||    
T  7979667 gattttatgatccctatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtg 7979728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 311 - 470
Target Start/End: Complemental strand, 6325399 - 6325239
Alignment:
Q  311 cttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| || | |||||||||||||||||||||||| |||||||| |||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctatagttttccccatttct 6325300  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
     | ||||||||    | || ||||||||||||| ||| |||||||||||||||||||||||    
T  6325299 gactttatggtccctaggatatttagtgctgatatgtatgttttttatcaattaatgtgtg 6325239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 310 - 442
Target Start/End: Complemental strand, 8851635 - 8851503
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||    
T  8851635 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttt-cccctttc 8851537  T
Q  409 taattttatggttttcatgacatttagtgctgat 442  Q
    | ||||||||||   |||||||||||||||||||    
T  8851536 tgattttatggtccccatgacatttagtgctgat 8851503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 310 - 438
Target Start/End: Original strand, 7664249 - 7664378
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| |||||||||  |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  7664249 gcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctttc 7664348  T
Q  409 taattttatggttttcatgacatttagtgc 438  Q
    | ||||||||||   ||||| |||||||||    
T  7664349 tgattttatggtccccatgatatttagtgc 7664378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 311 - 471
Target Start/End: Original strand, 19141446 - 19141598
Alignment:
Q  311 cttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||||||||||| |||| |||||||||| ||| ||||||||| |||||||||         
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcgaatttaccccctatagttttccccc----- 19141539  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
       |||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19141540 ---tttatgatccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 19141598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 309 - 470
Target Start/End: Complemental strand, 18750179 - 18750032
Alignment:
Q  309 agcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||              |||||||    
T  18750179 agcttaattgcacttctccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcc--------------ccctttc 18750094  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    | ||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||    
T  18750093 tgattttatggtccccatgacatttagtgctgatgtgtttgttttttatcaattaatgtgtg 18750032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 17850973 - 17851109
Alignment:
Q  304 tttttagcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| || |||||||||||||||||||||  ||||||    
T  17850973 tttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaa-cgagcgattttgccccctatagatttccc 17851071  T
Q  403 cctttctaattttatggttttcatgacatttagtgctg 440  Q
    ||||| | ||||||||||   ||||| |||||||||||    
T  17851072 cctttatgattttatggtccccatgatatttagtgctg 17851109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 310 - 453
Target Start/End: Complemental strand, 5380012 - 5379868
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| | |||||||||| |||||||||||||||||| ||| |||||||||    
T  5380012 gcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccccctttc 5379913  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgtttt 453  Q
    | |||| |||||   | |||||| | | |||||||||||||||||    
T  5379912 tgatttgatggtccccctgacatctggcgctgatgtgtctgtttt 5379868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 312 - 471
Target Start/End: Original strand, 18749729 - 18749890
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    |||||||||||||| | ||| ||||||| ||||| |||||||||||||||||| |||| ||||||  |||||||||||||||| ||||  |||||||| |    
T  18749729 ttaattgcacttttactcctctagtttgtcaattatgtgattttgcaccccatagttttaaacgaatgattttgccccctatagtttt-tccctttctga 18749827  T
Q  412 ttttatggttttcatgacatttagtgctgatgtgtctg---ttttttatcaattaatgtgtgc 471  Q
    ||||||||    ||| ||||||||||||||||||||||   ||||||||||||||||||||||    
T  18749828 ttttatgggccccataacatttagtgctgatgtgtctgtttttttttatcaattaatgtgtgc 18749890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 316 - 440
Target Start/End: Original strand, 6324924 - 6325049
Alignment:
Q  316 ttgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaattt 414  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| ||||| |||| ||||||||||||||| |||||||| ||||||| |||||| ||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttccctctttctgattt 6325023  T
Q  415 tatggttttcatgacatttagtgctg 440  Q
    |||||    |||||||||||||||||    
T  6325024 tatggcccccatgacatttagtgctg 6325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 310 - 453
Target Start/End: Original strand, 5378662 - 5378806
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||||| ||| ||| |||||    
T  5378662 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccctctttc 5378761  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgtttt 453  Q
    | |||| |||||   | || ||| | | |||||||||||||||||    
T  5378762 tgatttgatggtccccctggcatctggcgctgatgtgtctgtttt 5378806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 312 - 439
Target Start/End: Original strand, 5793450 - 5793578
Alignment:
Q  312 ttaattgcacttttcccccta-tagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    ||||||||||||||||||||  |||||||||||||||| ||||||||| || || |||| |||||||||||||||||||||||| ||||||| ||||||     
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctatagttttccctctttctg 5793549  T
Q  411 attttatggttttcatgacatttagtgct 439  Q
    ||||||||||   |||||||||| |||||    
T  5793550 attttatggtccccatgacattttgtgct 5793578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 7980055 - 7979928
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||| || ||||||||||| ||||||| ||||||||||||||| |||| ||||||||||||| ||| |||||| |||| |||||||||    
T  7980055 gcttaattgcactttttcctctatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccgcctatagtttttcccctttct 7979956  T
Q  410 aattttatggttttcatgacatttagtg 437  Q
     ||||||||||   ||||| ||||||||    
T  7979955 gattttatggtccccatgatatttagtg 7979928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 310 - 403
Target Start/End: Original strand, 37720205 - 37720298
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||| ||||||||    
T  37720205 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg-cccctatagttttcccc 37720298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 2639535 - 2639430
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  2639535 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 2639436  T
Q  409 taattt 414  Q
    | ||||    
T  2639435 tgattt 2639430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 310 - 414
Target Start/End: Original strand, 26841588 - 26841693
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  26841588 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 26841687  T
Q  409 taattt 414  Q
    | ||||    
T  26841688 tgattt 26841693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 414
Target Start/End: Original strand, 18296071 - 18296182
Alignment:
Q  304 tttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||||||||||||| ||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||    
T  18296071 tttttagcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccc 18296170  T
Q  403 cctttctaattt 414  Q
    | ||||| ||||    
T  18296171 cttttctgattt 18296182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 414
Target Start/End: Original strand, 2638821 - 2638926
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  2638821 gcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttc 2638920  T
Q  409 taattt 414  Q
    | ||||    
T  2638921 tgattt 2638926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 26842291 - 26842186
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||| |||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  26842291 gcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 26842192  T
Q  409 taattt 414  Q
    | ||||    
T  26842191 tgattt 26842186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 407
Target Start/End: Complemental strand, 38490893 - 38490796
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccccttt 407  Q
    ||||||||||||||| | ||||||||||| ||||||||| ||||||||| | ||| |||| |||||||||||||||| ||| ||  ||||||||||||    
T  38490893 gcttaattgcactttcctccctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttgcaccccatctttttcccccttt 38490796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 414
Target Start/End: Original strand, 7591204 - 7591307
Alignment:
Q  312 ttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    ||||||| ||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||||     
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 7591303  T
Q  411 attt 414  Q
    ||||    
T  7591304 attt 7591307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 414
Target Start/End: Complemental strand, 7591909 - 7591798
Alignment:
Q  304 tttttagcttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| |||||||||||  |||| | |||||  |||| |||||||| |||||||||||||||  ||| |||||||||||||||| ||  ||  |||||||    
T  7591909 tttttggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatttttttccc 7591810  T
Q  403 cctttctaattt 414  Q
    ||||||| ||||    
T  7591809 cctttctgattt 7591798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 18296746 - 18296691
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||    
T  18296746 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 18296691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 32673193 - 32673143
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||||| |||||||  ||||||||||||| |||||||||||||    
T  32673193 ttaattgcactttttcccctatcttttgccaattgtgcgattttgcacccc 32673143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 6171509 - 6171456
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  6171509 gcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc 6171456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 20347517 - 20347464
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  20347517 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20347464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 30190924 - 30190977
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  30190924 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 30190977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 24832332 - 24832387
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||||    
T  24832332 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccat 24832387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 6171157 - 6171207
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacc 360  Q
    ||||||||||||||||||||||||  ||||  ||||||| |||||||||||    
T  6171157 gcttaattgcacttttccccctatcttttgttaattgtgcgattttgcacc 6171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 362
Target Start/End: Complemental strand, 11883984 - 11883926
Alignment:
Q  305 ttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||| ||||||||||||||||| |||||||  ||||| ||||||| |||||||||||||    
T  11883984 ttttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 11883926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 11883624 - 11883677
Alignment:
Q  310 gcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||||||| ||||||||  ||||| ||||||| |||||||||||||    
T  11883624 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 11883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 43495662 - 43495609
Alignment:
Q  305 ttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgca 358  Q
    |||| ||||||||||||||| || |||||| ||||| ||||||| |||||||||    
T  43495662 ttttggcttaattgcactttcccacctatattttgctaattgtgcgattttgca 43495609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 6e-63; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 29292923 - 29293085
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29292923 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctatagttttccccctttc 29293022  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | |||||||||||  |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  29293023 tgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattattgtgtgc 29293085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 305 - 471
Target Start/End: Complemental strand, 29293404 - 29293237
Alignment:
Q  305 ttttagcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  29293404 ttttggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctatagttttcccc 29293305  T
Q  404 ctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    |||||| |||||||||||  ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  29293304 ctttctgattttatggttcccatgacatttactgctgatgtgtctgttatttatcaattaatgtgtgc 29293237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 13744285 - 13744124
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| |    
T  13744285 gcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttttt 13744186  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     ||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13744185 gattttatggtccccatgatatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 13744124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 300 - 471
Target Start/End: Original strand, 37888824 - 37888998
Alignment:
Q  300 tatatttttagcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttt 398  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||    
T  37888824 tatatttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttt 37888923  T
Q  399 tccccctttctaattttatggttttcatgacatttagtgctgatgtgtctg--ttttttatcaattaatgtgtgc 471  Q
    ||||||||||| ||||||||||   ||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  37888924 tccccctttctgattttatggtccccatgacatttagtgctgatgtgtctgttttttttatcaattaacgtgtgc 37888998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 17156968 - 17157130
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||||| |||||||||||||    
T  17156968 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttc 17157067  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17157068 tgattttatggtccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 17157130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 37972449 - 37972287
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  37972449 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 37972350  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
      ||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37972349 agattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgc 37972287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 48359321 - 48359481
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||| |||||||||  |||||||||||||    
T  48359321 gcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctata-gtttccccctttct 48359419  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48359420 gattttatggtccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 48359481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 312 - 470
Target Start/End: Original strand, 18863970 - 18864129
Alignment:
Q  312 ttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||     
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 18864069  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    ||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||    
T  18864070 attttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtg 18864129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 10533035 - 10533197
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  10533035 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 10533134  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   ||||||||||||||||||||||| |||||||||| ||||||| |||||    
T  10533135 tgattttatggtccccatgacatttagtgctgatgtgtttgttttttattaattaatttgtgc 10533197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 37889312 - 37889149
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||    
T  37889312 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttc 37889213  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgtt-ttttatcaattaatgtgtgc 471  Q
    | ||||||||||   |||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  37889212 tgattttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaacgtgtgc 37889149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 3205146 - 3204984
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| | |||| |||||||||||||||||||||||| |||||||||||||    
T  3205146 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttc 3205047  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  3205046 tgattttatggtccccatgacatttagtgttgatgtatctgttttttatcaattaatgtgtgc 3204984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 3204670 - 3204830
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||||||||| ||||||| ||||||    
T  3204670 gcttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctctttct 3204768  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     ||||||||||   ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  3204769 gattttatggtccccatgacatttattgctgatgtgtctattttttatcaattaatgtgtgc 3204830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 20419377 - 20419214
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  20419377 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 20419278  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgtt-ttttatcaattaatgtgtgc 471  Q
    | ||||||||||   | ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  20419277 tgattttatggtccccgtgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgc 20419214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 9035346 - 9035182
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttc-ccccttt 407  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||    
T  9035346 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccccttt 9035247  T
Q  408 ctaattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtgc 471  Q
    || ||||||||||    ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  9035246 ctgattttatggtccagatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgc 9035182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 9034868 - 9035031
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatacttttcccccttt 407  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||| |||||||| || |||| |||||||||||||||||||||||| ||||||||||||    
T  9034868 gcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9034967  T
Q  408 ctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    || ||||||||||   ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  9034968 ctgattttatggtccccatgacatttaatgctgatgtgtctgttttttattaattaatgtgtgc 9035031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 312 - 471
Target Start/End: Complemental strand, 22740641 - 22740483
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||| ||||||| |||| ||||||| | |    
T  22740641 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagtttt-cccctttatga 22740543  T
Q  412 ttttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    || ||||||   ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  22740542 ttctatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgcgtgc 22740483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 42418592 - 42418755
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||| ||||||||||| ||||||||||| ||||||| ||||||| | || || |||| |||||||||||||||||||||||| |||||||||||||    
T  42418592 gcttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctatagttttccccctttc 42418691  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtgc 471  Q
    ||||||||||||   ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  42418692 taattttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgc 42418755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 13741558 - 13741719
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| |||||||| ||||||||| ||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||| |||||    
T  13741558 gcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccactttc 13741657  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | | ||||||||   | ||||||||||||||||| ||||||||||||||||||||||||||||    
T  13741658 tga-tttatggtccccgtgacatttagtgctgatctgtctgttttttatcaattaatgtgtgc 13741719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 310 - 478
Target Start/End: Original strand, 22740157 - 22740319
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  22740157 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 22740256  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgctacatgt 478  Q
    | ||||||||||   ||||||||||||||||| |       |||||||||||||||||||||| ||||||    
T  22740257 tgattttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgccacatgt 22740319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 310 - 442
Target Start/End: Complemental strand, 18864454 - 18864322
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||| ||| |||||||||||||||||||| ||||||||||||||    
T  18864454 gcttaattgtacttttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctatagttttccccctttct 18864355  T
Q  410 aattttatggttttcatgacatttagtgctgat 442  Q
     ||||||||||   |||||||||||||||||||    
T  18864354 gattttatggtccccatgacatttagtgctgat 18864322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 38826966 - 38826803
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| ||||||||| ||||||||| |||||||| ||||||||||| ||| |||| |||||| || |||||||||||||| |||||||||||||    
T  38826966 gcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctatagttttccccctttc 38826867  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgtt--ttttatcaattaatgtgtg 470  Q
    | |||||||| |   ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  38826866 tgattttatgatccccatgacatttagtgctgatgtgtctgtttcttttatcaattaatgtgtg 38826803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 312 - 471
Target Start/End: Complemental strand, 42419079 - 42418926
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||| || |||| |||||||||||||||||||||||| ||||||||||||||     
T  42419079 ttaattgcacttttccccctatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 42418980  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||||||||   ||||||||||||||||| |       ||||||||||||||||||||||    
T  42418979 attttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgc 42418926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 312 - 440
Target Start/End: Original strand, 20418891 - 20419020
Alignment:
Q  312 ttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||     
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 20418990  T
Q  411 attttatggttttcatgacatttagtgctg 440  Q
    ||||||||||   |||||||||||||||||    
T  20418991 attttatggtccccatgacatttagtgctg 20419020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 312 - 471
Target Start/End: Original strand, 36527387 - 36527546
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||| |||||| | ||||| |||| |||| |||| ||||||||| |    
T  36527387 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcaatttttccccttatagtttttcccctttctga 36527486  T
Q  412 ttttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    |||||| ||   |||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  36527487 ttttatagtccccatgacatttggtgatgatgtgtctattttttatcaattaatgtgtgc 36527546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 37971961 - 37972114
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||    
T  37971961 gcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttc 37972060  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    | ||||||||||   |||||||||||| ||||        ||||||||||||||||||||||    
T  37972061 tgattttatggtccccatgacatttagcgctg--------gttttttatcaattaatgtgtg 37972114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 313 - 421
Target Start/End: Complemental strand, 48359707 - 48359599
Alignment:
Q  313 taattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaat 412  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||| ||    
T  48359707 taattgcactttttcccctatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctatagttttccccctttctgat 48359608  T
Q  413 tttatggtt 421  Q
    |||||||||    
T  48359607 tttatggtt 48359599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 310 - 436
Target Start/End: Complemental strand, 36527851 - 36527724
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| ||||||| | ||||||||||||||| || ||||||||| ||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  36527851 gcttaattgcatttttccctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccctttc 36527752  T
Q  409 taattttatggttttcatgacatttagt 436  Q
    | |||||||||| | |||||||||||||    
T  36527751 tgattttatggtctccatgacatttagt 36527724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 414
Target Start/End: Original strand, 44599483 - 44599595
Alignment:
Q  303 atttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcc 401  Q
    |||||| ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||    
T  44599483 atttttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcc 44599582  T
Q  402 ccctttctaattt 414  Q
    |||||||| ||||    
T  44599583 ccctttctgattt 44599595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 44600188 - 44600083
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  44600188 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 44600089  T
Q  409 taattt 414  Q
    | ||||    
T  44600088 tgattt 44600083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 414
Target Start/End: Original strand, 13863305 - 13863419
Alignment:
Q  302 tatttttag-cttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatactttt 399  Q
    ||||||||| |||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||||    
T  13863305 tatttttaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt 13863404  T
Q  400 ccccctttctaattt 414  Q
    ||| |||||| ||||    
T  13863405 ccctctttctgattt 13863419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 13864009 - 13863905
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||  ||||||||||||| ||||| |||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  13864009 gcttaattgcacttttcacccctatcttttgccaattgtgcgattt-gcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttc 13863911  T
Q  409 taattt 414  Q
    | ||||    
T  13863910 tgattt 13863905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 8643819 - 8643714
Alignment:
Q  310 gcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||  ||||||  ||| ||||||||| |||||||||||||||  | | |||||||||||||||| ||| ||  |||||||||||||    
T  8643819 gcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttgcaccccatctttttccccctttc 8643720  T
Q  409 taattt 414  Q
    | ||||    
T  8643719 tgattt 8643714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 16199030 - 16198970
Alignment:
Q  310 gcttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccattgttt 369  Q
    |||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| ||||    
T  16199030 gcttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagttt 16198970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 13772642 - 13772697
Alignment:
Q  310 gcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    |||||||||||||||||| ||||||  ||||| |||||||||||||||||||||||    
T  13772642 gcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcaccccat 13772697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 27096392 - 27096346
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgca 358  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||||    
T  27096392 ttaattgcacttttccccctatcttttgtcaattgtgtgattttgca 27096346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 27181911 - 27181957
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgca 358  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||||    
T  27181911 ttaattgcacttttccccctatcttttgtcaattgtgtgattttgca 27181957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 3687709 - 3687656
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  3687709 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 3687656  T

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Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 9412378 - 9412325
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  9412378 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 9412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 18925374 - 18925314
Alignment:
Q  309 agcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgttta 370  Q
    ||||||||||||||||||| | |||| ||||| ||||||| |||||||||||||||| ||||    
T  18925374 agcttaattgcacttttcctc-tatattttgctaattgtgcgattttgcaccccatttttta 18925314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 362
Target Start/End: Complemental strand, 13772961 - 13772901
Alignment:
Q  303 atttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||| ||||||||||||||||| |||||||  ||||| ||||||| |||||||||||||    
T  13772961 atttttggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcacccc 13772901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 356
Target Start/End: Original strand, 27096042 - 27096094
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttg 356  Q
    ||||| ||||||||||||||| ||||||||| ||||| ||||||| |||||||    
T  27096042 tttttggcttaattgcactttcccccctatattttgctaattgtgcgattttg 27096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 356
Target Start/End: Complemental strand, 27182261 - 27182209
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttg 356  Q
    ||||| ||||||||||||||| ||||||||| ||||| ||||||| |||||||    
T  27182261 tttttggcttaattgcactttcccccctatattttgctaattgtgcgattttg 27182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 361
Target Start/End: Original strand, 35079956 - 35080012
Alignment:
Q  305 ttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccc 361  Q
    |||| ||||||||||||||||||||||||  ||||| ||||||| | ||||||||||    
T  35079956 ttttggcttaattgcacttttccccctatcttttgctaattgtggggttttgcaccc 35080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 385
Target Start/End: Complemental strand, 46816364 - 46816288
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttg 385  Q
    |||||||||||||||| ||| ||||  ||| |||||| || |||||||||||||||  ||| |||||||||||||||    
T  46816364 gcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttg 46816288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 8953947 - 8953889
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||| ||||||||||||||||||||||||  ||||  |||||||  ||||||||||||    
T  8953947 ttttttgcttaattgcacttttccccctatcttttgttaattgtgcaattttgcacccc 8953889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccc 361  Q
    ||||||||||||| ||||||||  ||||| ||||||| ||||||||||||    
T  6908534 ttaattgcactttcccccctattttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 23686416 - 23686473
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccc 361  Q
    ||||| ||||||||||||||||||||||||  ||||| ||||||   |||||||||||    
T  23686416 tttttggcttaattgcacttttccccctatcttttgctaattgtacaattttgcaccc 23686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 362
Target Start/End: Original strand, 3687345 - 3687408
Alignment:
Q  301 atatttttagcttaattgcactttt--ccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||| ||||||||||||||||  ||||||||  ||||  ||||||| |||||||||||||    
T  3687345 atatttttggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcacccc 3687408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 6e-63; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 47666388 - 47666226
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47666388 gcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttc 47666289  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | |||||||||||  ||||||||||||||||||||||| |||| |||||||||||||||||||    
T  47666288 tgattttatggttcccatgacatttagtgctgatgtgtgtgttatttatcaattaatgtgtgc 47666226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 304 - 478
Target Start/End: Complemental strand, 53688361 - 53688187
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    ||||| |||||||||||||||  |||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  53688361 tttttggcttaattgcactttctcccctatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctatagttttcccc 53688262  T
Q  404 ctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgctacatgt 478  Q
    |||||| |||||||| || ||||||||||||||| |||| |||||||| ||||||||||||||||||| ||||||    
T  53688261 ctttctgattttatgattctcatgacatttagtgttgatatgtctgttatttatcaattaatgtgtgccacatgt 53688187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 3353129 - 3353288
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||  ||||||||| ||||||||||||||    
T  3353129 gcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt--ccccctatagttttccccctttct 3353226  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     ||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3353227 gattttatggtccccatgacatttagtactgatgtgtctgttttttatcaattaatgtgtgc 3353288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 42672979 - 42673140
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| ||||||||||||||||| |||||||||||| |    
T  42672979 gcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctttat 42673078  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     |||||||||    ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  42673079 gattttatggcccccatgacatttagtgctgatatgtccgttttttatcaattaatgtgtgc 42673140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 311 - 470
Target Start/End: Complemental strand, 22429647 - 22429488
Alignment:
Q  311 cttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||| || ||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||     
T  22429647 cttaattgcactttccctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctg 22429548  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    ||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||    
T  22429547 attttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtg 22429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 27238466 - 27238628
Alignment:
Q  310 gcttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||||||||||| || |||| |||||||||||||||||||||||| |||||||||||||    
T  27238466 gcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttc 27238565  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  27238566 tgattttatggtccccatgacttttagtgctgatatgtctgttttttatcaattaatgtgtgc 27238628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 316 - 471
Target Start/End: Complemental strand, 3353597 - 3353441
Alignment:
Q  316 ttgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaatttt 415  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||  ||||||||||||| |||||    
T  3353597 ttgcacttttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctata-gtttccccctttctgatttt 3353499  T
Q  416 atggttttcatgacatttagtgctgatgtgtctg--ttttttatcaattaatgtgtgc 471  Q
    |||||   ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  3353498 atggtccccatgacatttagtgctgatgtgtctgttttttttatcaattaatgtgtgc 3353441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 40849014 - 40848852
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||||||| ||||| |||||||    
T  40849014 gcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcaccctttc 40848915  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   |||||||||||||| |||| || |||||||||||||||||||||||||    
T  40848914 tgattttatggtccccatgacatttagtgttgatatgcctgttttttatcaattaatgtgtgc 40848852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 47665912 - 47666074
Alignment:
Q  310 gcttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||||||| |||||| || |||||| ||||||||||||     
T  47665912 gcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgattttaccacctatagttttccccctttt 47666011  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||| ||||||||||||||| |||||||||| || |||||||||||||||||||    
T  47666012 tgattttatggttctcatgacatttagtggtgatgtgtctattatttatcaattaatgtgtgc 47666074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 26007183 - 26007344
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||| ||||| ||||||  ||||||    
T  26007183 gcttaattgcattttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttccatctttct 26007282  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     ||||||||||   ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  26007283 gattttatggtccccatgacatttagtgctgatatatctgttttttatcaattaatgtgtgc 26007344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 40848522 - 40848679
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  40848522 gcttaattgcacttttccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 40848621  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     ||||||||||   |||||||||||| ||||    || | ||||||||||||||||||||||    
T  40848622 gattttatggtccccatgacatttagcgctg----gttttttttttatcaattaatgtgtgc 40848679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 304 - 471
Target Start/End: Complemental strand, 48160392 - 48160224
Alignment:
Q  304 tttttagcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||| ||    
T  48160392 tttttggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcc 48160293  T
Q  403 cctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||||| |||||||| |   |||||||||||||| | || | ||||||||||||||||||||||||||    
T  48160292 cctttctgattttatgatccccatgacatttagtgttaatttttctgttttttatcaattaatgtgtgc 48160224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 53687889 - 53688050
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||| |||||||||||||    
T  53687889 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatagttttccccctttc 53687988  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   |||||||||||| | ||||||||||| |||||||||||||| ||||||    
T  53687989 tgattttatggtccccatgacatttagcgttgatgtgtctg-tttttatcaattaacgtgtgc 53688050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 303 - 471
Target Start/End: Complemental strand, 27238960 - 27238799
Alignment:
Q  303 atttttagcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcc 401  Q
    |||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||| ||||||| ||||||    
T  27238960 atttttggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttcc 27238861  T
Q  402 ccctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    |||||||| |||||||||||  |||||||||||||||||        |||||||||||||||||||||||    
T  27238860 ccctttctgattttatggttcccatgacatttagtgctg--------gttttttatcaattaatgtgtgc 27238799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 36180557 - 36180716
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||| ||||||| ||||||||| |||||||| ||||||||| ||||| |||| ||||||||||||||| |||||||| ||||||||||||||    
T  36180557 gcttaattgcacatttcccc-tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctatagttttccccctttct 36180655  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
     ||||||||||   |||||||||||||| |||| ||||||||||||||||||||| |||||    
T  36180656 gattttatggtccccatgacatttagtgttgatatgtctgttttttatcaattaacgtgtg 36180716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 304 - 469
Target Start/End: Complemental strand, 24485518 - 24485349
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||||||||||| | ||||||    
T  24485518 tttttggcttaattgcacttttctccctatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagtattcccc 24485419  T
Q  404 ctttctaattttatggttttcatgacatttagtgctgatgtgtctg-----ttttttatcaattaatgtgt 469  Q
    |||||||||||||||||   ||||||| ||||||||||| ||| ||     ||||||||||||||||||||    
T  24485418 ctttctaattttatggtccccatgaca-ttagtgctgatatgtttgttttcttttttatcaattaatgtgt 24485349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 303 - 420
Target Start/End: Complemental strand, 42673355 - 42673238
Alignment:
Q  303 atttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  42673355 atttttggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccc 42673256  T
Q  403 cctttctaattttatggt 420  Q
    ||||||| ||||||||||    
T  42673255 cctttctgattttatggt 42673238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 44007968 - 44008129
Alignment:
Q  310 gcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||| |||||||||||  ||||||||  | |||||| |  || |||| |||||||||||||||||||||||| |||| ||||||||    
T  44007968 gcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttcccctttc 44008067  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    | |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  44008068 tgattttatggttcccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtg 44008129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 10348858 - 10348721
Alignment:
Q  304 tttttagcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| |||||||||||||||| || | |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  10348858 tttttggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccc 10348759  T
Q  403 cctttctaattttatggttttcatgacatttagtgctg 440  Q
    ||||||||||||||||||   | |||||||||||||||    
T  10348758 cctttctaattttatggtccccgtgacatttagtgctg 10348721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 310 - 478
Target Start/End: Original strand, 22429159 - 22429321
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||| ||||||||||||| || ||||||||| || |||| ||||||||||||||| |||||||| |||||||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctatagttttccccctttc 22429258  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgctacatgt 478  Q
    | ||||||||||   |||||||||||||||||||       |||||||||||||||||||||| ||||||    
T  22429259 tgattttatggtccccatgacatttagtgctgat-------ttttttatcaattaatgtgtgccacatgt 22429321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 310 - 418
Target Start/End: Original strand, 48159898 - 48160007
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  48159898 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 48159997  T
Q  409 taattttatg 418  Q
    | ||||||||    
T  48159998 tgattttatg 48160007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 312 - 442
Target Start/End: Original strand, 24485025 - 24485155
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    |||||| || |||||| |||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||||| |||| ||||||||| |    
T  24485025 ttaattacatttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctatagtttttcccctttctga 24485124  T
Q  412 ttttatggttttcatgacatttagtgctgat 442  Q
    |||||||||   |||||||||||||||||||    
T  24485125 ttttatggtccccatgacatttagtgctgat 24485155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 304 - 471
Target Start/End: Original strand, 10348474 - 10348643
Alignment:
Q  304 tttttagcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||   |||||||| |||||  ||| ||||||||||||||| |||||||| |||| ||    
T  10348474 tttttagcttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctatagtttttcc 10348573  T
Q  403 cctttctaattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtgc 471  Q
    ||||||| ||||||| ||   ||||||||||||||||||| |||||| |||||||| ||||||| |||||    
T  10348574 cctttctgattttatagtccccatgacatttagtgctgatatgtctgtttttttattaattaatatgtgc 10348643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 304 - 478
Target Start/End: Complemental strand, 44008459 - 44008292
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||  |||||||||| ||| |||| |||||||| ||||| ||||||||| ||||| ||    
T  44008459 tttttggcttaattgcacttttcatcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctcc 44008360  T
Q  404 ctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgctacatgt 478  Q
    |||||| ||||||||||  || ||||||||| ||||| |       |||||||||||||||||||||| ||||||    
T  44008359 ctttctgattttatggtcctcgtgacatttaatgctggt-------ttttttatcaattaatgtgtgccacatgt 44008292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 312 - 471
Target Start/End: Complemental strand, 26007670 - 26007518
Alignment:
Q  312 ttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||  |||  ||| |||||||||||||||||||||||| ||||||||||||||     
T  26007670 ttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctatagttttccccctttctg 26007571  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||||||||   ||| |||||||||||||        |||||||||||||||||||||||    
T  26007570 attttatggtccccataacatttagtgctg--------gttttttatcaattaatgtgtgc 26007518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 312 - 442
Target Start/End: Original strand, 53766166 - 53766296
Alignment:
Q  312 ttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||| || ||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||  ||||||| ||| |     
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctata-gtttccccatttttg 53766264  T
Q  411 attttatggttttcatgacatttagtgctgat 442  Q
    |||||||||| | |||||||||||||||||||    
T  53766265 attttatggtctccatgacatttagtgctgat 53766296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 305 - 437
Target Start/End: Complemental strand, 42456251 - 42456121
Alignment:
Q  305 ttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccc 404  Q
    |||| ||||||||||||||| ||||||| ||||  ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||  ||||||||    
T  42456251 ttttggcttaattgcacttt-ccccctaaagttccccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctata-gtttccccc 42456154  T
Q  405 tttctaattttatggttttcatgacatttagtg 437  Q
    ||||| ||||||||||   ||||||||||||||    
T  42456153 tttctgattttatggtccccatgacatttagtg 42456121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 310 - 440
Target Start/End: Complemental strand, 36181043 - 36180912
Alignment:
Q  310 gcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||| ||||||||||||  ||||||| ||||||| ||||||| |||| ||||||||||||||  |||||||| |||| ||| ||||    
T  36181043 gcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgattttttcccctatagtttttcccttttc 36180944  T
Q  409 taattttatggttttcatgacatttagtgctg 440  Q
    | |||||||| |   |||||||||||||||||    
T  36180943 tgattttatgatccccatgacatttagtgctg 36180912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 21896563 - 21896404
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||| |||| |||||||| |||| |||||||| ||||||||||||||| |||| | |||||||||||||| ||| ||  |||| ||| ||| |    
T  21896563 gcttaattgcattttttcccctatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgcaccccatcatttttcccattttt 21896464  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     |||||||||  | | ||| |||||||| ||||||||| |||||| |||| |||||||||||    
T  21896463 gattttatgg--tccctgatatttagtgatgatgtgtcggtttttgatcatttaatgtgtgc 21896404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 310 - 419
Target Start/End: Original strand, 8314014 - 8314124
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||| |||| |||||||| |||||||||||| ||  ||| ||||| |||||||||| ||||||  |||||||||||||    
T  8314014 gcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctatcattttccccctttc 8314113  T
Q  409 taattttatgg 419  Q
    | |||||||||    
T  8314114 tgattttatgg 8314124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 386 - 471
Target Start/End: Complemental strand, 53766566 - 53766482
Alignment:
Q  386 ccccctatacttttccccctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||||||| |||||||| ||||| ||||||||||   ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  53766566 ccccctatatttttcccc-tttctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatatgtgc 53766482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 42455852 - 42455931
Alignment:
Q  391 tatacttttccccctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    |||| |||||||||||||| ||||||||||   |||||| ||||||| |||| | |||||||||||||||||||||||||    
T  42455852 tatagttttccccctttctgattttatggtccccatgacgtttagtgatgatatatctgttttttatcaattaatgtgtg 42455931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 409
Target Start/End: Complemental strand, 1928484 - 1928387
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||| ||| | ||||||  ||||||||||||| |||||||||||||||  ||| ||||||| | |||||| |||||| ||||||||| |||||    
T  1928484 ttaattgcattttcctccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagtggttttgcaccctatccttttccccttttct 1928387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 47871174 - 47871122
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||||||  ||||| ||||||| |||||||||||||    
T  47871174 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 47871122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 8315134 - 8315083
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccc 361  Q
    ||||||||||||||| ||||||||| |||| |||||||| ||||||||||||    
T  8315134 gcttaattgcactttcccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 20969072 - 20969019
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  20969072 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20969019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 21895658 - 21895714
Alignment:
Q  310 gcttaattgcacttttccccc--tatagtttgccaattgtgtgattttgcaccccat 364  Q
    |||||||||||||||| ||||  |||  |||||||||||||||||||||||||||||    
T  21895658 gcttaattgcactttttccccactatgttttgccaattgtgtgattttgcaccccat 21895714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 362
Target Start/End: Complemental strand, 17372653 - 17372594
Alignment:
Q  302 tatttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||| ||||||||||||||||| |||||||| ||| | ||||||| |||||||||||||    
T  17372653 tattttaagcttaattgcactttt-cccctatattttactaattgtgcgattttgcacccc 17372594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 42455791 - 42455839
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgc 357  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||||    
T  42455791 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 42455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 358
Target Start/End: Complemental strand, 42627598 - 42627550
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgca 358  Q
    ||||||||||||||||||| ||||  ||||| |||||||||||||||||    
T  42627598 gcttaattgcacttttccctctatcttttgctaattgtgtgattttgca 42627550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 53766632 - 53766572
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgttt 369  Q
    ||||||||||||||||||||| |||||||||| |||||||  ||||||||||| || ||||    
T  53766632 gcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttt 53766572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 17372299 - 17372352
Alignment:
Q  310 gcttaattgcac-ttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||| ||||||||||||  ||||| ||||||| |||||||||||||    
T  17372299 gcttaattgcaccttttccccctattttttgctaattgtgcgattttgcacccc 17372352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 14016014 - 14015962
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    |||||||||||||||  |||||  ||||| ||||||| |||||||||||||||    
T  14016014 ttaattgcacttttcatcctatcttttgctaattgtgcgattttgcaccccat 14015962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 2e-62; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 26207362 - 26207523
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  26207362 gcttaattgcactttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttct 26207461  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     |||||||||||  ||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  26207462 gattttatggttcccatgacatttaatgctgatgtgtttgttatttatcaattaatgtgtgc 26207523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 23539842 - 23540002
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||||| |||||||    
T  23539842 gcttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctatatttttcctcctttct 23539940  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     |||||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||    
T  23539941 gattttatggttcccatgacatttagtgctgatgtgtctattatttatcaattaatgtgtgc 23540002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 304 - 478
Target Start/End: Complemental strand, 32703709 - 32703533
Alignment:
Q  304 tttttagcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  32703709 tttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccc 32703610  T
Q  403 cctttctaattttatggttttcatgacatttagtgctgatgtgtctgtt-ttttatcaattaatgtgtgctacatgt 478  Q
    | ||||| ||||||||||   |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  32703609 cttttctgattttatggtccccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacatgt 32703533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 28196826 - 28196663
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  28196826 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 28196727  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgtt-ttttatcaattaatgtgtgc 471  Q
    | ||||||||||   |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  28196726 tgattttatggtccccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgc 28196663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 9380308 - 9380470
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  9380308 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctatagttttccccctttc 9380407  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||  ||||||||||||||  |||| ||||||||||||||||||||||||||||    
T  9380408 tgattttatggtcctcatgacatttagtattgatatgtctgttttttatcaattaatgtgtgc 9380470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 28196347 - 28196509
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  28196347 gcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 28196446  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  28196447 tgattttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatatgtgc 28196509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 310 - 466
Target Start/End: Complemental strand, 26207799 - 26207642
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  26207799 gcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttc 26207700  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatg 466  Q
    | |||||||||||  ||||| |||||||| ||||||||||||| ||||||||||||||    
T  26207699 tgattttatggttcccatgatatttagtgttgatgtgtctgttatttatcaattaatg 26207642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 310 - 474
Target Start/End: Complemental strand, 39086676 - 39086509
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||||||||||  || |||| |||||||||||||||||||||||| |||||||||||||    
T  39086676 gcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctatagttttccccctttc 39086577  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgtt--ttttatcaattaatgtgtgctac 474  Q
    | |||||||||| | ||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  39086576 tgattttatggtctgcatgacatttagtgctgatgtgtctgttttttttatcaattaatgtgtgctac 39086509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 305 - 471
Target Start/End: Complemental strand, 169497 - 169330
Alignment:
Q  305 ttttagcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    |||| ||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  169497 ttttggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccc 169398  T
Q  404 ctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    |||| | ||||||||||   |||||||||||||| |||||||||||||||||||||||||||||||||    
T  169397 ctttttgattttatggtccccatgacatttagtgttgatgtgtctgttttttatcaattaatgtgtgc 169330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 9023245 - 9023407
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||||| ||||||||||||     
T  9023245 gcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctatagttttcccccttta 9023344  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  9023345 tgattttatggtccccatgacatttaatgctgatatgtctgttttttatcaattaatgtgtgc 9023407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 48405963 - 48406125
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  48405963 gcttaattgcacttttccccctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctttct 48406062  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtgc 471  Q
     | ||||||||   |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  48406063 gactttatggtccccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgc 48406125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 323 - 471
Target Start/End: Complemental strand, 25162352 - 25162204
Alignment:
Q  323 tttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaattttatggttt 422  Q
    |||||||||||| |||| ||||||||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||||||||| ||||||||||      
T  25162352 tttccccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtcc 25162253  T
Q  423 tcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25162252 ccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgc 25162204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 32703226 - 32703388
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||| |||||||| | |||| |||||||||||||||||||||||| |||||||||||||    
T  32703226 gcttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttc 32703325  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   | ||||||||| ||||||||||||||||||||||||||||||||||||    
T  32703326 tgattttatggtccccgtgacatttaatgctgatgtgtctgttttttatcaattaatgtgtgc 32703388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 39744518 - 39744356
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  39744518 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 39744419  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgtt-ttttatcaattaatgtgtg 470  Q
    | ||||| ||||   ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  39744418 tgattttgtggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtg 39744356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 23540305 - 23540144
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| ||||||||||||| |||||||| |||||||||||| || |||| |||||||||||||| ||||||||| |||||||||||||    
T  23540305 gcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctatagttttccccctttc 23540206  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    | ||||||||||   ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  23540205 tgattttatggtccccatgacatttagtgctgatgtgtgtgttttttattaattaatgtgtg 23540144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 312 - 471
Target Start/End: Complemental strand, 48406435 - 48406276
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    ||||||| ||||| ||||||||| ||||||||||||| |||||||||||| || |||| |||||||||||||||||||||||| |||| ||||||||| |    
T  48406435 ttaattgtactttcccccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagtttttcccctttctga 48406336  T
Q  412 ttttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    |||||||||   ||||||||||| |||| |||||||||||||||||||||||||||||||    
T  48406335 ttttatggtccccatgacatttaatgcttatgtgtctgttttttatcaattaatgtgtgc 48406276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 310 - 468
Target Start/End: Original strand, 169014 - 169175
Alignment:
Q  310 gcttaattgcacttttc--cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccccttt 407  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||||| |||| |||||||    
T  169014 gcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctatagtttttccccttt 169113  T
Q  408 ctaattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtg 468  Q
    || ||||||||||   |||||||||||||| ||||||||||| |||||||||||||||||||    
T  169114 ctgattttatggtccccatgacatttagtgttgatgtgtctgtttttttatcaattaatgtg 169175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 292783 - 292945
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| |||||||||||||||||||  |||||||| | ||| |||| |||||||||||||||||||||| | |||||||||||||    
T  292783 gcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgccccctacagttttccccctttc 292882  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  292883 tgattttatggtccccatgacatttagtgctgatatgtctgttttttattaattaatgtgtgc 292945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 310 - 455
Target Start/End: Complemental strand, 4239419 - 4239273
Alignment:
Q  310 gcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  4239419 gcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatatttttccccctttc 4239320  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgtttttt 455  Q
    | ||||||||||   |||||||||||||| |||| ||||||||||||    
T  4239319 tgattttatggtccccatgacatttagtgttgatatgtctgtttttt 4239273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 25161877 - 25162010
Alignment:
Q  308 tagcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctt 406  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||    
T  25161877 tagcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 25161976  T
Q  407 tctaattttatggttttcatgacatttagtgctg 440  Q
    ||| ||| ||||||   |||||||||||||||||    
T  25161977 tctgattgtatggtccccatgacatttagtgctg 25162010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 310 - 440
Target Start/End: Complemental strand, 9380794 - 9380663
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| |||| |||| |||||||||||||||||||||||| |||||||||||||    
T  9380794 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttc 9380695  T
Q  409 taattttatggttttcatgacatttagtgctg 440  Q
    | ||||||||||   |||||||||||||||||    
T  9380694 tgattttatggtccccatgacatttagtgctg 9380663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 305 - 439
Target Start/End: Original strand, 43292033 - 43292168
Alignment:
Q  305 ttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    |||| ||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||| |||    
T  43292033 tttttgcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttccc 43292132  T
Q  404 ctttctaattttatggttttcatgacatttagtgct 439  Q
    |||||| ||||||||||  |||||||||||||||||    
T  43292133 ctttctgattttatggtcctcatgacatttagtgct 43292168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 43292410 - 43292250
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| ||||||||| | |||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| |||| ||||||||    
T  43292410 gcttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt-cccctttc 43292312  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||| ||    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  43292311 tgattttat-gtcccaatgacatttagtgttgatatgtctgttttttatcaattaatgtgtgc 43292250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 310 - 478
Target Start/End: Complemental strand, 293270 - 293108
Alignment:
Q  310 gcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||    
T  293270 gcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccgtatagttttccccctttc 293171  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgctacatgt 478  Q
    | |||||||||    ||||| ||||||||||| |       |||||||||||||||||||||| ||||||    
T  293170 tgattttatggcccccatgaaatttagtgctggt-------ttttttatcaattaatgtgtgccacatgt 293108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 303 - 471
Target Start/End: Complemental strand, 39912546 - 39912378
Alignment:
Q  303 atttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    |||||| |||||||| |||||||||  |||||||||  |||||||| ||||||||| ||||| |||| ||||||| ||||||||| |||||| |||| |     
T  39912546 atttttggcttaattacacttttccttctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagtgattttgccacctatagtttttcg 39912447  T
Q  403 cctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||| | ||||||| ||   ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  39912446 cctttatgattttatagtccccatgacatttagtgctgatatgtccgttttttatcaattaatgtgtgc 39912378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 310 - 420
Target Start/End: Complemental strand, 9023733 - 9023622
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||||| |||||||||||||    
T  9023733 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttc 9023634  T
Q  409 taattttatggt 420  Q
    | ||||||||||    
T  9023633 tgattttatggt 9023622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 310 - 420
Target Start/End: Original strand, 39744031 - 39744142
Alignment:
Q  310 gcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||||| ||||||||  ||| |||||||||||||||||||||||| |||||||||||||    
T  39744031 gcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctatagttttccccctttc 39744130  T
Q  409 taattttatggt 420  Q
    | ||||||||||    
T  39744131 tgattttatggt 39744142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 312 - 439
Target Start/End: Complemental strand, 12758254 - 12758127
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    ||||||||||||||   ||||||||||||||||| |||| |||||||| |||| |||| |||||||| ||||||||||||||| |||||||||||||| |    
T  12758254 ttaattgcactttttttcctatagtttgccaattatgtgtttttgcacgccatagttttaaacgagcaattttgccccctatagttttccccctttctga 12758155  T
Q  412 ttttatggttttcatgacatttagtgct 439  Q
    |||||||||    |||||||||||||||    
T  12758154 ttttatggtccctatgacatttagtgct 12758127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 323 - 418
Target Start/End: Complemental strand, 44468962 - 44468867
Alignment:
Q  323 tttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaattttatg 418  Q
    |||||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  44468962 tttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcctcctttctgattttatg 44468867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 312 - 470
Target Start/End: Original strand, 12757770 - 12757929
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    ||||||| ||||||||  |||||||||| |||||||| ||||||||| | ||| |||| ||||||||||||||| |||||||| |||| || |||||| |    
T  12757770 ttaattgtacttttccttctatagtttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttgtcccctatagtttttcctctttctga 12757869  T
Q  412 ttttatggttttcatgacatttagtgctgatgtgt-ctgttttttatcaattaatgtgtg 470  Q
    |||||||||   ||||| ||||||||||||| | |  | |||||||||||||||||||||    
T  12757870 ttttatggtccccatgatatttagtgctgatatctgtttttttttatcaattaatgtgtg 12757929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 310 - 414
Target Start/End: Original strand, 50678780 - 50678885
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  50678780 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 50678879  T
Q  409 taattt 414  Q
    | ||||    
T  50678880 tgattt 50678885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 414
Target Start/End: Original strand, 36095818 - 36095922
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| |||||| ||||| ||||||||    
T  36095818 gcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccctat-ctttttcccctttc 36095916  T
Q  409 taattt 414  Q
    | ||||    
T  36095917 tgattt 36095922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 43051305 - 43051200
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||| |||||    
T  43051305 gcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctctttc 43051206  T
Q  409 taattt 414  Q
    | ||||    
T  43051205 tgattt 43051200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 50679477 - 50679372
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||  ||||||||||||  |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  50679477 gcttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 50679378  T
Q  409 taattt 414  Q
    | ||||    
T  50679377 tgattt 50679372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 414
Target Start/End: Complemental strand, 36096526 - 36096423
Alignment:
Q  312 ttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    ||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||| |||||||||     
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttttcccctttctg 36096427  T
Q  411 attt 414  Q
    ||||    
T  36096426 attt 36096423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 420
Target Start/End: Original strand, 39912055 - 39912164
Alignment:
Q  310 gcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||| |||||||||||   ||||||| |||||| || || || |||| |||||| |||||||||||| |||| |||||||||||||    
T  39912055 gcttaattgcacttttcctccctatagtttattaattgtgcgattttacatcc-atagttttaaacgaacgattttgcccc-tatagttttccccctttc 39912152  T
Q  409 taattttatggt 420  Q
    | ||||||||||    
T  39912153 tgattttatggt 39912164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 386
Target Start/End: Original strand, 11529166 - 11529246
Alignment:
Q  307 ttagcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgc 386  Q
    ||||||||||||||||||||| |||||   |||||||||||||||||||||||||||||  ||| || || ||||||||||    
T  11529166 ttagcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcaccccatgtttttaatcgtgcgattttgc 11529246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 409
Target Start/End: Original strand, 56505694 - 56505794
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||  ||| ||  |||| ||||||| ||| ||  |||||||||||||    
T  56505694 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttc 56505793  T
Q  409 t 409  Q
    |    
T  56505794 t 56505794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 414
Target Start/End: Original strand, 43050610 - 43050713
Alignment:
Q  312 ttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||  ||||||  ||| ||||||||| |||||||||||||||  ||| ||||||| |||||||| ||| ||  ||||||||||||||     
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgattttgcaccccatctttttccccctttctg 43050709  T
Q  411 attt 414  Q
    ||||    
T  43050710 attt 43050713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 11241713 - 11241659
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||| ||||||||||||||  ||||||||||||| |||||||||||||||    
T  11241713 gcttaattgtacttttccccctatcttttgccaattgtgggattttgcaccccat 11241659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 3930532 - 3930480
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||||||  ||||| ||||||| |||||||||||||    
T  3930532 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 3930480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 307 - 362
Target Start/End: Original strand, 22681573 - 22681628
Alignment:
Q  307 ttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||||||||| ||||||||  |||| |||||||| |||||||||||||    
T  22681573 ttagcttaattgcactttcccccctatcttttgtcaattgtgcgattttgcacccc 22681628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 45830249 - 45830145
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||| ||||||||| |||||||  |||| |||||||| |||||| ||||||||  ||| ||| |||||||||||| ||| || ||||| ||||||||    
T  45830249 gcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacaccccatgtttttaaaagagcgattttgcaccccat-ctttttcccctttc 45830151  T
Q  409 taattt 414  Q
    | ||||    
T  45830150 tgattt 45830145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 16555870 - 16555815
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||||    
T  16555870 gcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccat 16555815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 24775836 - 24775781
Alignment:
Q  310 gcttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||||||||| |||||  |||| |||||||| |||||||||||||||    
T  24775836 gcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcaccccat 24775781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 8181992 - 8182046
Alignment:
Q  310 gcttaattgcactttt-ccccctatagttt-gccaattgtgtgattttgcacccc 362  Q
    |||||||||||||||| |||||||| |||| |||||||||| |||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcacccc 8182046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 49178866 - 49178816
Alignment:
Q  313 taattgcacttttc-cccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||||| |||||||  ||||||||||||| |||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcacccc 49178816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 18077255 - 18077202
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||| |||||||  ||||| ||||||| |||||||||||||    
T  18077255 gcttaattgcacttttcacccctattttttgctaattgtgcgattttgcacccc 18077202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 56506627 - 56506522
Alignment:
Q  310 gcttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||| ||  |||||||||||||  |||||| || ||||  ||| ||  |||||||||||| ||| ||  |||||||||||||    
T  56506627 gcttaattgcacttttcacccttatcttttgccaattgtgcaattttgtactccatgtttttaattgagcgattttgcaccccatcattttccccctttc 56506528  T
Q  409 taattt 414  Q
    | ||||    
T  56506527 tgattt 56506522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 35393828 - 35393776
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||| ||||||  ||||| ||||||| || ||||||||||    
T  35393828 gcttaattgcacttttcaccctatcttttgctaattgtgcgaatttgcacccc 35393776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 54508816 - 54508868
Alignment:
Q  310 gcttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccc 361  Q
    |||||||||||||||| || || ||  ||||||||||||||||||||||||||    
T  54508816 gcttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccc 54508868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 9e-59; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 12498568 - 12498730
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  12498568 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 12498667  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgt-tttttatcaattaatgtgtgc 471  Q
    | ||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12498668 tgattttatgg-ttccatgacatttagtgctgatgtgtctgtctttttatcaattaatgtgtgc 12498730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 22729492 - 22729332
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  22729492 gcttaattgcacttttccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 22729393  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
     ||||||||||    ||||||||||||| |||| |||||||||||||||||||||||||||    
T  22729392 gattttatggtccctatgacatttagtgttgatatgtctgttttttatcaattaatgtgtg 22729332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 312 - 478
Target Start/End: Complemental strand, 3888713 - 3888546
Alignment:
Q  312 ttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    ||||||||||||||||| || ||| ||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||     
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 3888614  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgctacatgt 478  Q
    ||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  3888613 attttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatgtgtgccacatgt 3888546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 12498981 - 12498816
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||||||| |||||||||||||    
T  12498981 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttccccctttc 12498882  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgtt---ttttatcaattaatgtgtgc 471  Q
    | ||||||||||   ||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  12498881 tgattttatggtccccatgacatttagtgctgatgtgtctgtttttttttatcaattaatgtgtgc 12498816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 312 - 470
Target Start/End: Complemental strand, 41072264 - 41072106
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    |||||| ||||||||| ||||||||||| |||||||  |||||||||||| || |||| |||||||||||||||||||||||| ||||||||||||||||    
T  41072264 ttaattacacttttcctcctatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttctaa 41072165  T
Q  412 ttttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    |||||||||   ||||||||||||||||||||||||||||||||||| |||||||||||    
T  41072164 ttttatggtccccatgacatttagtgctgatgtgtctgttttttatcgattaatgtgtg 41072106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 19514526 - 19514690
Alignment:
Q  310 gcttaattgcacttttcccc--ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccccttt 407  Q
    ||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  19514526 gcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 19514625  T
Q  408 ctaattttatggttttcatgacatttagtgctgatgtgtctgttttt-tatcaattaatgtgtgc 471  Q
    || ||||||||||   ||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  19514626 ctgattttatggtccccatgacatttagtgctgatatgtctgtttttgtatcaattaatgtgtgc 19514690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 26571217 - 26571057
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||| ||||||    
T  26571217 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcctttc 26571118  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    | ||||||||||   ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  26571117 tgattttatggtccccatgacatttagtgctgatatgtctgt-ttttatcaattaatgtgtg 26571057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 3888240 - 3888402
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||| ||||||| ||||||||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  3888240 gcttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 3888339  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtgc 471  Q
    | ||||||||| |  |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  3888340 tgattttatgg-tcccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgc 3888402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 312 - 471
Target Start/End: Original strand, 2817152 - 2817312
Alignment:
Q  312 ttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| |||||  ||| |||||||||||||||||||||||| |||| |||||||||     
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctata-tttttcccctttctg 2817250  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtgc 471  Q
    ||||||||||   |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  2817251 attttatggtccccatgacatttagtgttgatgtgtctgtttttttatcaattaatgtgtgc 2817312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 43464244 - 43464091
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  43464244 gcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttccccctttct 43464145  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     ||||||||||   |||||||||||||||||        |||||||||||||||||||||||    
T  43464144 gattttatggtccccatgacatttagtgctg--------gttttttatcaattaatgtgtgc 43464091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 34147142 - 34147302
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||||||  ||||||||  |||||||| ||||||||||||| | |||| |||||||||||||||||||||||| ||||||||||||||    
T  34147142 gcttaattgcacttttccct-tatagtttatcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttct 34147240  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtg 470  Q
     ||||||||||   | ||||||||||||||||||| |||| |||||||||||||||||||||    
T  34147241 gattttatggtccccgtgacatttagtgctgatgtatctgtttttttatcaattaatgtgtg 34147302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 312 - 440
Target Start/End: Original strand, 21207229 - 21207358
Alignment:
Q  312 ttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||     
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 21207328  T
Q  411 attttatggttttcatgacatttagtgctg 440  Q
    ||||||||||   |||||||||||||||||    
T  21207329 attttatggtccccatgacatttagtgctg 21207358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 37610203 - 37610353
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||| |||||||           
T  37610203 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccttatagttttccc------- 37610295  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
       ||||||||   ||| |||||||||| |||| |||||||||||||||||||||||||||    
T  37610296 ---tttatggtccccataacatttagtgttgatatgtctgttttttatcaattaatgtgtg 37610353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 311 - 471
Target Start/End: Complemental strand, 2817626 - 2817467
Alignment:
Q  311 cttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||||||||||||||||| ||||||| |||||| || || || |||| |||||||||||||||| |||||||  |||||| | |||||    
T  2817626 cttaattgcacttttccccctatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgctccctata-atttccctccttcta 2817528  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||||||||   ||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  2817527 attttatggtccccatgacatttagtactgatgtgtttgtttttcatcaattaatgtgtgc 2817467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 34147563 - 34147404
Alignment:
Q  310 gcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||| |||||||||||||| |||||||| ||||||||||| | | |||| |||||||||||||||||||||||| |||||||||||||    
T  34147563 gcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctatagttttccccctttc 34147464  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtg 470  Q
    | ||||||||||   | ||||||||||   ||||||||||| |||||||||||||||||||||    
T  34147463 tgattttatggtccccgtgacatttag---tgatgtgtctgtttttttatcaattaatgtgtg 34147404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 310 - 440
Target Start/End: Complemental strand, 19515016 - 19514885
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||| |||||||  ||||||||||||||| |||||||||||||    
T  19515016 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctatagttttccccctttc 19514917  T
Q  409 taattttatggttttcatgacatttagtgctg 440  Q
    | |||||||||||  |||||||||||||||||    
T  19514916 tgattttatggttcccatgacatttagtgctg 19514885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 37780321 - 37780472
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||           
T  37780321 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccc------- 37780413  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtg 470  Q
       ||||||||   ||| |||||||||| |||| |||||| |||||||||||||||||||||    
T  37780414 ---tttatggtccccataacatttagtgttgatatgtctgtttttttatcaattaatgtgtg 37780472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 302 - 437
Target Start/End: Complemental strand, 37610678 - 37610544
Alignment:
Q  302 tatttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcc 401  Q
    ||||||| ||||||||| ||||| ||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||  |||||    
T  37610678 tatttttggcttaattgtactttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgccccctata-gtttcc 37610580  T
Q  402 ccctttctaattttatggttttcatgacatttagtg 437  Q
    |||||||| ||||||||||   ||||||||||||||    
T  37610579 ccctttctgattttatggtccccatgacatttagtg 37610544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 26570730 - 26570884
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||| ||||||||||| |||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||||||    
T  26570730 gcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttc 26570829  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   |||||||||||| ||||        |||||||||||||||||||||||    
T  26570830 tgattttatggtccccatgacatttagcgctg--------gttttttatcaattaatgtgtgc 26570884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 312 - 416
Target Start/End: Original strand, 43463759 - 43463863
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||| |    
T  43463759 ttaattgcacttttccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctga 43463858  T
Q  412 tttta 416  Q
    |||||    
T  43463859 tttta 43463863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 312 - 442
Target Start/End: Complemental strand, 10098991 - 10098861
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||  |||||||| ||||||| |||||| |    
T  10098991 ttaattgcacttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctga 10098892  T
Q  412 ttttatggttttcatgacatttagtgctgat 442  Q
    |||||||||   ||||||||||||| |||||    
T  10098891 ttttatggtccccatgacatttagtactgat 10098861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 310 - 440
Target Start/End: Original strand, 22729009 - 22729138
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||  ||| |||| ||||||||||||||| |||||||| ||||||||||||||    
T  22729009 gcttaattgcacttttccccctatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttg-cccctatagttttccccctttct 22729107  T
Q  410 aattttatggttttcatgacatttagtgctg 440  Q
     ||||||||||   |||||||||||||||||    
T  22729108 gattttatggtccccatgacatttagtgctg 22729138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 302 - 442
Target Start/End: Complemental strand, 37780803 - 37780664
Alignment:
Q  302 tatttttagcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttc 400  Q
    ||||||| ||||||||| ||||||||||| |||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||| ||||||||  ||||    
T  37780803 tatttttggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttg-cccctata-gtttc 37780706  T
Q  401 cccctttctaattttatggttttcatgacatttagtgctgat 442  Q
    ||||||||| ||||||||||   |||||||||||||||||||    
T  37780705 cccctttctgattttatggtccccatgacatttagtgctgat 37780664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 312 - 440
Target Start/End: Complemental strand, 11317025 - 11316896
Alignment:
Q  312 ttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    ||||||||||||||  || || || ||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| ||||||| ||||||     
T  11317025 ttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctatagttttccctctttctg 11316926  T
Q  411 attttatggttttcatgacatttagtgctg 440  Q
    ||||||||||   |||||||||||||||||    
T  11316925 attttatggtccccatgacatttagtgctg 11316896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 310 - 420
Target Start/End: Original strand, 25940522 - 25940633
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| ||||  ||||||||||||| |||||||| |||||||||||| || |||| |||||||||||||||||||||||| ||||| |||||||    
T  25940522 gcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcaccctttc 25940621  T
Q  409 taattttatggt 420  Q
    | ||||||||||    
T  25940622 tgattttatggt 25940633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 419
Target Start/End: Complemental strand, 25941073 - 25940956
Alignment:
Q  304 tttttagcttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatactttt-cc 401  Q
    ||||| ||||||||||||||||||| |||||||||||  |||| || ||||||||| ||||| |||| |||||||||||||||||||||||| |||| ||    
T  25941073 ttttttgcttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccc 25940974  T
Q  402 ccctttctaattttatgg 419  Q
    |||||||| |||||||||    
T  25940973 ccctttctgattttatgg 25940956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 372 - 470
Target Start/End: Complemental strand, 25940955 - 25940856
Alignment:
Q  372 aacgagcgattttgccccctatacttttccccctttctaattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtg 470  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||   ||||| || |||||||||| ||| || |||||||||||||||||||||    
T  25940955 aacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgatatatagtgctgatatgtttgtttttttatcaattaatgtgtg 25940856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 10098520 - 10098667
Alignment:
Q  310 gcttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||| || ||||||||||| |||||||| ||||||||| || || |||| |||||||||||||||              |||||||||    
T  10098520 gcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttg--------------ccccctttc 10098605  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    | ||||||||||   |||||||||||||| |||| |||||||||||||||||||||||||||    
T  10098606 tgattttatggtccccatgacatttagtgatgatatgtctgttttttatcaattaatgtgtg 10098667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 312 - 470
Target Start/End: Original strand, 30401885 - 30402039
Alignment:
Q  312 ttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||| | ||||||||||||||||||   |||||||| ||||| |||| |||| ||||||||||||||||||| |||| ||||||| |     
T  30401885 ttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccctataatttt-cccctttatg 30401983  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    ||||||||||   ||||| |||||||| ||    || | |||||||||||||||||||||    
T  30401984 attttatggtccccatgatatttagtgttg----gttttttttttatcaattaatgtgtg 30402039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 18817664 - 18817559
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  18817664 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 18817565  T
Q  409 taattt 414  Q
    | ||||    
T  18817564 tgattt 18817559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 421
Target Start/End: Original strand, 42919306 - 42919417
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||| ||||| |||||||| ||| ||||||||| |||||| |||| |||  ||| |||||||||||||||| ||||||  |||| |||||||||    
T  42919306 gcttaattgctctttttcccctatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctatcatttttcccctttct 42919405  T
Q  410 aattttatggtt 421  Q
     |||||||||||    
T  42919406 gattttatggtt 42919417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 406
Target Start/End: Original strand, 11316717 - 11316812
Alignment:
Q  312 ttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctt 406  Q
    ||||||||||||||||| |||||||||||||||||||   |||||||| || ||  ||| |||||||| ||||||||||||||| |||||||||||    
T  11316717 ttaattgcacttttccctcctatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccctatagttttccccctt 11316812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 414
Target Start/End: Original strand, 18816944 - 18817058
Alignment:
Q  301 atatttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatactttt 399  Q
    |||||||  ||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| ||||||||||||||||  || ||  ||||    
T  18816944 atattttaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcatcccatcttttt 18817043  T
Q  400 ccccctttctaattt 414  Q
    |||||||||| ||||    
T  18817044 ccccctttctgattt 18817058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 312 - 407
Target Start/End: Complemental strand, 11351478 - 11351383
Alignment:
Q  312 ttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccccttt 407  Q
    ||||||||||||||| | |||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||| | ||| || |||||||||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttacaccccat-cttttcccccttt 11351383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 310 - 407
Target Start/End: Original strand, 11350809 - 11350906
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccccttt 407  Q
    ||||||||||| ||||| |||||||  |||||||||||||  ||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  11350809 gcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 11350906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 34577216 - 34577162
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    |||||||||||||||| |||||||  ||||| |||||||||||||||||||||||    
T  34577216 gcttaattgcactttttcccctatcttttgctaattgtgtgattttgcaccccat 34577162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 25115758 - 25115811
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  25115758 gcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcacccc 25115811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 25174850 - 25174903
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  25174850 gcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcacccc 25174903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 31569910 - 31569983
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttg 385  Q
    ||||||||||||||||||||||  |||| |||||||| ||||||||||| |||  ||| ||||||| |||||||    
T  31569910 ttaattgcacttttccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 31569983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 22428935 - 22428989
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||||| ||||||||  ||||| ||||||| |||||||||||||||    
T  22428935 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccat 22428989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 22429248 - 22429194
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||| ||||||||||||  ||||| ||||||| |||||||||||||||    
T  22429248 gcttaattgcatttttccccctatcttttgctaattgtgcgattttgcaccccat 22429194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 41383219 - 41383167
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||| ||||||||||||||  ||||| ||||||| |||||||||||||    
T  41383219 gcttaattgaacttttccccctattttttgctaattgtgcgattttgcacccc 41383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 18433016 - 18433071
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||||    
T  18433016 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccat 18433071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 26020451 - 26020506
Alignment:
Q  310 gcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    |||||||||||||||||| ||||||  ||||| ||||||| |||||||||||||||    
T  26020451 gcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccat 26020506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 16466804 - 16466746
Alignment:
Q  302 tatttttag-cttaattgcacttttc-cccctatagtttgccaattgtgtgattttgca 358  Q
    ||||||||| |||||||||||||||| |||||||| ||||| ||||||| |||||||||    
T  16466804 tatttttaggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 23011074 - 23011131
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccc 361  Q
    ||||| ||||||||||| |||||||| |||  ||||| ||||||| ||||||||||||    
T  23011074 tttttggcttaattgcatttttccccttatcttttgctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 33324891 - 33324838
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||  |||||||  |||| ||||||||||||||||||||||    
T  33324891 gcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcacccc 33324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 34576870 - 34576922
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||| ||||||||  ||||| ||||||| |||||| ||||||||    
T  34576870 ttaattgcactttcccccctatcttttgctaattgtgcgattttacaccccat 34576922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 5e-57; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 29074424 - 29074264
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||    
T  29074424 gcttaattgctctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttct 29074325  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
     |||||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  29074324 gattttatgattcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtg 29074264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 29079188 - 29079028
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||    
T  29079188 gcttaattgctctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttct 29079089  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
     |||||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  29079088 gattttatgattcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtg 29079028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 29106997 - 29106837
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||    
T  29106997 gcttaattgctctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttct 29106898  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
     |||||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  29106897 gattttatgattcccatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtg 29106837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 33974352 - 33974189
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  33974352 gcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 33974253  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgtt-ttttatcaattaatgtgtgc 471  Q
    | |||||||||| | ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  33974252 tgattttatggtctccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgc 33974189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 305 - 471
Target Start/End: Original strand, 2354405 - 2354571
Alignment:
Q  305 ttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccc 404  Q
    |||| ||||||||||| |||||||||||||||||  |||||||  ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||    
T  2354405 ttttggcttaattgcatttttccccctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctatagttttccccc 2354504  T
Q  405 tttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||    
T  2354505 tttctgattttatggttcccatgacatttagtgctgatgtgtctgttatttatcaattaatatgtgc 2354571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 7654601 - 7654439
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||| ||||||| || ||||||||||||| |||||||||||||    
T  7654601 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctatagttttccccctttc 7654502  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7654501 tgattttatggtccccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 7654439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 10087911 - 10087750
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  10087911 gcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 10087812  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||| | |||||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  10087811 tgattttatgg-tctcatgacatttagtgctgatatgtttgttttttatcgattaatgtgtgc 10087750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 312 - 470
Target Start/End: Complemental strand, 32734047 - 32733888
Alignment:
Q  312 ttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| ||||| ||||||||     
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctataattttctccctttctg 32733948  T
Q  411 attttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    |||||||||||  ||||| ||||||||||||| ||||||||| |||| ||||||||||||    
T  32733947 attttatggttcccatgatatttagtgctgatatgtctgtttattattaattaatgtgtg 32733888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 2354863 - 2354702
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| |||||||  |||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||      
T  2354863 gcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccctatagtttt-ccccttca 2354765  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | |||||||||||  ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  2354764 tgattttatggttcccatgacatttaatgctgatgtgtctgttatttatcaattaatgtgtgc 2354702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 309 - 471
Target Start/End: Complemental strand, 22755143 - 22754981
Alignment:
Q  309 agcttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccccttt 407  Q
    ||||||||||||||||||||| | |||||||| ||||| || ||||||||||| ||| |||| |||||||||||||||||||||||| |||||||| |||    
T  22755143 agcttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctatagttttcccc-ttt 22755045  T
Q  408 ctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    || ||||||| ||   ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22755044 ctgattttattgtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgc 22754981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 22684416 - 22684280
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||| |||| |||    
T  22684416 tttttggcttaattgcacttttccccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttccc 22684317  T
Q  404 ctttctaattttatggttttcatgacatttagtgctg 440  Q
    |||||| ||||||||||   ||||| |||||||||||    
T  22684316 ctttctgattttatggtccccatgatatttagtgctg 22684280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 22754652 - 22754788
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||| |||| |||    
T  22754652 tttttggcttaattgcacttttccccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttccc 22754751  T
Q  404 ctttctaattttatggttttcatgacatttagtgctg 440  Q
    |||||| ||||||||||   ||||| |||||||||||    
T  22754752 ctttctgattttatggtccccatgatatttagtgctg 22754788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 13176614 - 13176781
Alignment:
Q  303 atttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    |||||| || ||||||| |||||  ||||||||||||||||||||  ||||||| | |||||  ||| ||| |||||||||||||||||||| |||||||    
T  13176614 atttttggcataattgcccttttttccctatagtttgccaattgtacgattttgtatcccatgattttaaatgagcgattttgccccctatagttttccc 13176713  T
Q  403 cctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
     |||||| ||||||||||   | ||||||||||||||||| |||||||||||||||||||||||||||    
T  13176714 actttctgattttatggtccccgtgacatttagtgctgatatgtctgttttttatcaattaatgtgtg 13176781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 13177108 - 13176984
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||| ||||||||||||||||||||| || |||||||| |||||| |||| ||| |||| ||||||||||||||||||| |||| || |||||||||||    
T  13177108 gcttagttgcacttttccccctatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttgccccttatagttgtccccctttct 13177009  T
Q  410 aattttatggttttcatgacattta 434  Q
     ||||||||||   |||||||||||    
T  13177008 gattttatggtccccatgacattta 13176984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 32733571 - 32733691
Alignment:
Q  322 ttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaattttatggtt 421  Q
    ||||||| |||||||||||||||| |  ||||||||| ||||| |||| |||||||| |||||||| |||||| |||| ||||||||| |||||||||||    
T  32733571 ttttccctctatagtttgccaattatacgattttgcatcccatagttttaaacgagcaattttgcctcctatagtttttcccctttctgattttatggtt 32733670  T
Q  422 ttcatgacatttagtgctgat 442  Q
      |||||||||||||||||||    
T  32733671 cccatgacatttagtgctgat 32733691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 299 - 414
Target Start/End: Original strand, 33828980 - 33829096
Alignment:
Q  299 ttatatttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatactt 397  Q
    |||||||||| ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  ||    
T  33828980 ttatatttttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttt 33829079  T
Q  398 ttccccctttctaattt 414  Q
    |||||||||||| ||||    
T  33829080 ttccccctttctgattt 33829096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 33829689 - 33829584
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  33829689 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 33829590  T
Q  409 taattt 414  Q
    | ||||    
T  33829589 tgattt 33829584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 3825530 - 3825580
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||||||||    
T  3825530 ttaattgcacttttccccctatattttgctaattgtgcgattttgcacccc 3825580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 10039677 - 10039729
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||||||  ||||| ||||||| |||||||||||||    
T  10039677 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 10039729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 13579703 - 13579651
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||| |||||| |||||| ||||||| |||||||||||||    
T  13579703 gcttaattgcacttttctccctatcgtttgctaattgtgcgattttgcacccc 13579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 437
Target Start/End: Original strand, 33973867 - 33973991
Alignment:
Q  312 ttaattgcacttttccc-cctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    ||||||| | ||||||| ||||||||||| || ||||| ||||||| ||   || |||| | ||||||||||||| |||||||| |||| ||  ||||||    
T  33973867 ttaattgtatttttccctcctatagtttgtcagttgtgcgattttgtactttatagttttacacgagcgattttgtcccctatagtttttcc--tttcta 33973964  T
Q  411 attttatggttttcatgacatttagtg 437  Q
    ||||||||||   ||||||||||||||    
T  33973965 attttatggtccccatgacatttagtg 33973991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 21031980 - 21032032
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||||||||||||||   ||||| ||||||| |||||||||||||    
T  21031980 gcttaattgcacttttccccctaacttttgctaattgtgcgattttgcacccc 21032032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 3403718 - 3403773
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||||    
T  3403718 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccat 3403773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 3404042 - 3403989
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||    
T  3404042 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 23250593 - 23250645
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||||||| |||||||  |||| |||||||| ||| |||||||||    
T  23250593 gcttaattgcactttttcccctatcttttgtcaattgtgagatcttgcacccc 23250645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 30388063 - 30388111
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgca 358  Q
    ||||||||||||||| ||||||||  ||||| ||||||| |||||||||    
T  30388063 gcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 30388111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 31598778 - 31598726
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||||||||||||  ||||  ||||||| ||||||||| |||||    
T  31598778 ttaattgcacttttccccctatcttttgttaattgtgcgattttgcatcccat 31598726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 112; Significance: 2e-56; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 310 - 476
Target Start/End: Complemental strand, 185327 - 185160
Alignment:
Q  310 gcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||| |||||    
T  185327 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctctttc 185228  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgctacat 476  Q
    | ||||||||||   |||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  185227 tgattttatggtccccatgacatttagtgctaatatgtctgttttttatcaattaatgtgtgccacat 185160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 184834 - 184971
Alignment:
Q  304 tttttagcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| ||||||||||||||||| || |||||||||| ||| ||||  |||||||||||||| |||| ||||||||||||||||| |||||| |||||||    
T  184834 ttttttgcttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctatagttttccc 184933  T
Q  403 cctttctaattttatggttttcatgacatttagtgctg 440  Q
    ||||||| ||||||||||   |||||||||||||||||    
T  184934 cctttctgattttatggtccccatgacatttagtgctg 184971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 41662522 - 41662685
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||| ||||| |||||||    
T  41662522 gcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttctccctttc 41662621  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtgc 471  Q
    |||||||||||||  ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  41662622 taattttatggttcccatgacatttagtgctgatgtgtttgtttttttatcaattaatgtgtgc 41662685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 24473821 - 24473659
Alignment:
Q  310 gcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||||||    
T  24473821 gcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttc 24473722  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24473721 tgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgc 24473659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 310 - 465
Target Start/End: Original strand, 37396709 - 37396865
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  37396709 gcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 37396808  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaat 465  Q
    | ||||||||||   ||||||||||||||||||| ||||||||||||||||||||||    
T  37396809 tgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaat 37396865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 304 - 471
Target Start/End: Original strand, 24473338 - 24473506
Alignment:
Q  304 tttttagcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||| ||| |||    
T  24473338 tttttggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctatagtttcccc 24473437  T
Q  403 cctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||||| ||||||||||   |||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  24473438 cctttctgattttatggtccccatgacatttagtgatgacgtgtctgttttttatcaattaacgtgtgc 24473506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 310 - 471
Target Start/End: Complemental strand, 34498608 - 34498446
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||| |||| || |||| ||||||||||| |||||||||||||    
T  34498608 gcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctatatttttccccctttc 34498509  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34498508 tgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgc 34498446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 310 - 478
Target Start/End: Complemental strand, 6199149 - 6198979
Alignment:
Q  310 gcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  6199149 gcttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccctttc 6199050  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgtt-ttttatcaattaatgtgtgctacatgt 478  Q
    | |||||||| |   ||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||    
T  6199049 tgattttatgatccccatgacatttagtgctgaaatgtctgtttttttatcaattaatgtgtgccacatgt 6198979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 9623503 - 9623664
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||| | | ||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||||||||| |||||||  ||||    
T  9623503 gcttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctttttc 9623602  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    | ||||||||||   | ||||||||||||||||| |||||||||||||||||||||| ||||    
T  9623603 tgattttatggtccccttgacatttagtgctgatatgtctgttttttatcaattaatatgtg 9623664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 16169660 - 16169499
Alignment:
Q  310 gcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||| |||||||||||  ||||||||  | |||||| |  || |||| |||||||||||||||||||||||| |||| ||||||||    
T  16169660 gcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttcccctttc 16169561  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    | |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  16169560 tgattttatggttcccatgacatttagtgctgatatgtctgttttttatcaattaatgtgtg 16169499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 304 - 471
Target Start/End: Complemental strand, 37397204 - 37397044
Alignment:
Q  304 tttttagcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| |||| |||||||||| |||||||||||||  ||||||    
T  37397204 tttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctatagatttccc 37397105  T
Q  403 cctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||||| ||||||||||   |||||||||||||||||        |||||||||||||||||||||||    
T  37397104 cctttctgattttatggtccccatgacatttagtgctg--------gttttttatcaattaatgtgtgc 37397044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 311 - 471
Target Start/End: Original strand, 15444213 - 15444374
Alignment:
Q  311 cttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||| |||||||| ||||||||||||||||||   ||||| ||  |||| |||| |||||||||||||||| ||||||| |||||||||||| |    
T  15444213 cttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgattttgctccctatagttttccccctttat 15444312  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
     |||||||||| | ||||||||||||||||||| | |||||||||||||||||||| |||||    
T  15444313 gattttatggtctccatgacatttagtgctgatatctctgttttttatcaattaatatgtgc 15444374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 310 - 440
Target Start/End: Original strand, 17431288 - 17431419
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||||| |||| ||| |||| |||||||||||||||||||||||| |||||||||||||    
T  17431288 gcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctatagttttccccctttc 17431387  T
Q  409 taattttatggttttcatgacatttagtgctg 440  Q
    | ||||||||||   |||||||||||||||||    
T  17431388 tgattttatggtccccatgacatttagtgctg 17431419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 310 - 439
Target Start/End: Complemental strand, 20861691 - 20861561
Alignment:
Q  310 gcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| |||| ||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||| |||||| |||||||||||||    
T  20861691 gcttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcctcctataattttccccctttc 20861592  T
Q  409 taattttatggttttcatgacatttagtgct 439  Q
    | ||||||||||   ||||||||||||||||    
T  20861591 tgattttatggtccccatgacatttagtgct 20861561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 312 - 442
Target Start/End: Original strand, 34498125 - 34498255
Alignment:
Q  312 ttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||| |||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||| |||||||  |||||||||||||     
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccctata-gtttccccctttctg 34498223  T
Q  411 attttatggttttcatgacatttagtgctgat 442  Q
    ||||||||||   |||||||||||||||||||    
T  34498224 attttatggtccccatgacatttagtgctgat 34498255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 304 - 478
Target Start/End: Original strand, 16169169 - 16169336
Alignment:
Q  304 tttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||  |||||||||| ||| |||| |||||||| ||||| ||||||||| ||||| ||    
T  16169169 tttttggcttaattgcacttttcatcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctcc 16169268  T
Q  404 ctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgctacatgt 478  Q
    |||||| ||||||||||  || ||||||||| ||||| |       |||||||||||||||||||||| ||||||    
T  16169269 ctttctgattttatggtcctcgtgacatttaatgctggt-------ttttttatcaattaatgtgtgccacatgt 16169336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 312 - 440
Target Start/End: Complemental strand, 15444698 - 15444569
Alignment:
Q  312 ttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    |||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||| |||| ||||||||||||||  |||||||| ||||||| ||||||     
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctg 15444599  T
Q  411 attttatggttttcatgacatttagtgctg 440  Q
    ||||||||||   |||||||||||||||||    
T  15444598 attttatggtccccatgacatttagtgctg 15444569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 312 - 437
Target Start/End: Complemental strand, 25439176 - 25439052
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaa 411  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||| |||||  ||||||||||| | |    
T  25439176 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctata-gtttccccctttttga 25439078  T
Q  412 ttttatggttttcatgacatttagtg 437  Q
    |||||||||   ||||||||||||||    
T  25439077 ttttatggtccccatgacatttagtg 25439052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 6198659 - 6198814
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| ||| ||| || | ||||||||| |||||||||||| || |||| |||||||||||||||||||||||| |||||||| ||||    
T  6198659 gcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccatttc 6198758  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    | ||||||||||   ||||||||||||||||| |       ||||||||||||||||||||||    
T  6198759 tgattttatggtccccatgacatttagtgctggt-------ttttttatcaattaatgtgtgc 6198814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 331 - 440
Target Start/End: Complemental strand, 33727136 - 33727027
Alignment:
Q  331 tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaattttatggttttcatgaca 430  Q
    |||||||||| ||||||| ||||||||||  ||| |||| |||||||||||||||||||||||| |||||||||||||| ||||||||||   |||||||    
T  33727136 tatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgaca 33727037  T
Q  431 tttagtgctg 440  Q
    ||||||||||    
T  33727036 tttagtgctg 33727027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 377 - 470
Target Start/End: Original strand, 33726734 - 33726827
Alignment:
Q  377 gcgattttgccccctatacttttccccctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||   ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  33726734 gcgattttgcctcctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaataaatgtgtg 33726827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 310 - 414
Target Start/End: Original strand, 2856527 - 2856632
Alignment:
Q  310 gcttaattgcacttttcc-ccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||| | |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||||  |||||||| |||||||||||||    
T  2856527 gcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgttcgattttatcccctatagttttccccctttc 2856626  T
Q  409 taattt 414  Q
    | ||||    
T  2856627 tgattt 2856632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 304 - 414
Target Start/End: Complemental strand, 39724107 - 39723996
Alignment:
Q  304 tttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||    
T  39724107 tttttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccc 39724008  T
Q  403 cctttctaattt 414  Q
    ||||||| ||||    
T  39724007 cctttctgattt 39723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 420
Target Start/End: Original strand, 15442765 - 15442875
Alignment:
Q  311 cttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||| ||||||||| |||| || ||||||||||||||||||||||||||  ||| ||||| |||||||||| |||||| |||||||| |||| |    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttgcaccctatccttttcccgctttgt 15442864  T
Q  410 aattttatggt 420  Q
     ||||||||||    
T  15442865 gattttatggt 15442875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 9823414 - 9823309
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  9823414 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 9823315  T
Q  409 taattt 414  Q
    | ||||    
T  9823314 tgattt 9823309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 298 - 414
Target Start/End: Complemental strand, 13027346 - 13027229
Alignment:
Q  298 tttatatttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatact 396  Q
    |||| |||||| | ||||||||||||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |    
T  13027346 tttaaatttttggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctt 13027247  T
Q  397 tttccccctttctaattt 414  Q
    ||||||||||||| ||||    
T  13027246 tttccccctttctgattt 13027229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 310 - 414
Target Start/End: Original strand, 13936724 - 13936827
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||||||||||||  ||| ||||||||| |||||||||||||||  ||| |||||||||||||||| ||| || ||||| |||||||||    
T  13936724 gcttaattgcacttttccccctatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccat-ctttttcccctttct 13936822  T
Q  410 aattt 414  Q
     ||||    
T  13936823 gattt 13936827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 414
Target Start/End: Original strand, 13026636 - 13026741
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| |||||||  ||||||||||||| ||||||||||| |||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  13026636 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttgcaccccatctttttccccctttc 13026735  T
Q  409 taattt 414  Q
    | ||||    
T  13026736 tgattt 13026741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 414
Target Start/End: Original strand, 9822743 - 9822854
Alignment:
Q  304 tttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| ||||||||||||||||| |||||||  |||  |||||||| |||||||||||||||  ||| |||||||||||||||| || |||  |||||||    
T  9822743 tttttggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccatatctttttccc 9822842  T
Q  403 cctttctaattt 414  Q
    ||||||| ||||    
T  9822843 cctttctgattt 9822854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 414
Target Start/End: Original strand, 15042148 - 15042251
Alignment:
Q  312 ttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttcta 410  Q
    ||||||||||||| |||||| ||  |||||||||||||||||||||||||| ||||||| ||| |||||||||||| | | ||  ||||||||||||||     
T  15042148 ttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccctattgttttaaatgagcgattttgcacgccatcattttccccctttctg 15042247  T
Q  411 attt 414  Q
    ||||    
T  15042248 attt 15042251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 414
Target Start/End: Original strand, 22851385 - 22851496
Alignment:
Q  304 tttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccc 402  Q
    ||||| ||||||||||||||||| |||||||  |||| |||||||| |||||||||||||||  ||| |||| ||||||||||| ||| ||  |||||||    
T  22851385 tttttggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttccc 22851484  T
Q  403 cctttctaattt 414  Q
    ||||||| ||||    
T  22851485 cctttctgattt 22851496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 311 - 369
Target Start/End: Original strand, 25438794 - 25438853
Alignment:
Q  311 cttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgttt 369  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttt 25438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 9623934 - 9623880
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||||||||||    
T  9623934 gcttaattgcacttttcatcctatagtttgccaatcgtgtgattttgcaccccat 9623880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 409
Target Start/End: Complemental strand, 13937442 - 13937342
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||| |||  |||| |||||||| || ||||||||||||  ||| ||||||| |||||||| ||  || ||||||||||||||    
T  13937442 gcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttgcacctcatccttttccccctttc 13937343  T
Q  409 t 409  Q
    |    
T  13937342 t 13937342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 336 - 414
Target Start/End: Original strand, 39723430 - 39723508
Alignment:
Q  336 tttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaattt 414  Q
    ||||||||||||| ||||||||| |||||  ||| |||||||||||||||| ||| ||  |||||||||||||| ||||    
T  39723430 tttgccaattgtgcgattttgcatcccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 39723508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 414
Target Start/End: Original strand, 3307334 - 3307444
Alignment:
Q  305 ttttagcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttcccc 403  Q
    |||| ||||||||||| ||||| |||||||  |||| |||||||| ||||||||| |||||  ||| |||| ||||||||||| ||| ||  ||||| ||    
T  3307334 ttttggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttgcaccccatctttttctcc 3307433  T
Q  404 ctttctaattt 414  Q
    |||||| ||||    
T  3307434 ctttctgattt 3307444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 43162235 - 43162285
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacc 360  Q
    ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  43162235 gcttaattgcacttttccccctatattttgttaattgtgcgattttgcacc 43162285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 41662456 - 41662403
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  41662456 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 41662403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 43246229 - 43246176
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  43246229 gcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcacccc 43246176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 765736 - 765788
Alignment:
Q  311 cttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 765788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 12281125 - 12281176
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacc 360  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||||||    
T  12281125 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 12281176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 33726696 - 33726743
Alignment:
Q  311 cttaattgcactttt-ccccctatagtttgccaattgtgtgattttgc 357  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  33726696 cttaattgcactttttccccctatagtttaccaattgtgcgattttgc 33726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 37752085 - 37752140
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccat 364  Q
    ||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||||    
T  37752085 gcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcaccccat 37752140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 15156238 - 15156185
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  |||| |||||||| |||||||||||||    
T  15156238 gcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacccc 15156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 16929295 - 16929242
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||| |||||||  ||||| ||||||| |||||||||||||    
T  16929295 gcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcacccc 16929242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 43162588 - 43162539
Alignment:
Q  313 taattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||||||||||||  |||| |||| ||| |||||||||||||    
T  43162588 taattgcacttttccccctatcttttgtcaatcgtgcgattttgcacccc 43162539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 3463998 - 3463946
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccc 361  Q
    ||||||||||||||||| |||||||| ||||| ||||||| ||| ||||||||    
T  3463998 gcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccc 3463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 106; Significance: 8e-53; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 310 - 478
Target Start/End: Complemental strand, 38748 - 38579
Alignment:
Q  310 gcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || | |||||| ||||||||||||||||| |||||||||||||    
T  38748 gcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctatagttttccccctttc 38649  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgctacatgt 478  Q
    | ||||||| || | ||||||||||||||||||| ||| |||||||||| ||||||||||||| ||||||    
T  38648 tgattttatagtctccatgacatttagtgctgatatgtgtgttttttattaattaatgtgtgccacatgt 38579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 341 - 471
Target Start/End: Original strand, 38284 - 38414
Alignment:
Q  341 caattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttctaattttatggttttcatgacatttagtgctg 440  Q
    |||||||| ||||||||| ||||| |||| ||| |||||||||||||||||||| ||||||| |||||| ||||||||||   |||||||||||||||||    
T  38284 caattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctatagttttccctctttctgattttatggtccccatgacatttagtgctg 38383  T
Q  441 atgtgtctgttttttatcaattaatgtgtgc 471  Q
    || ||||||||||||||||||||||||||||    
T  38384 atatgtctgttttttatcaattaatgtgtgc 38414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 98; Significance: 5e-48; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 331 - 492
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| |||||||| ||||    
T  331 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttc 430  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
    | ||||||||||   | ||||||||||||||||| ||| |||||||||||||||||||||||    
T  431 tgattttatggtccccgtgacatttagtgctgatatgtttgttttttatcaattaatgtgtg 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 310 - 442
Target Start/End: Complemental strand, 815 - 685
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||  ||| ||||||||||||||| |||||||| |||| | | |||||    
T  815 gcttaattgcactttttcccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttg-cccctatagtttt-ctcatttct 718  T
Q  410 aattttatggttttcatgacatttagtgctgat 442  Q
     ||||||||||   ||||||||||| |||||||    
T  717 gattttatggtccccatgacatttaatgctgat 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 96; Significance: 8e-47; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 310 - 471
Target Start/End: Original strand, 9906 - 10069
Alignment:
Q  310 gcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcacccc-attgtttaaaacgagcgattttgccccctatacttttcccccttt 407  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||| |||||| || |||| |||||||||||||||||||||||| ||||||||||||    
T  9906 gcttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10005  T
Q  408 ctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    || ||||||||||   ||| |||||||||| |||| |||||||||||||||||| |||||||||    
T  10006 ctgattttatggtccccataacatttagtgttgatatgtctgttttttatcaatcaatgtgtgc 10069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 378 - 471
Target Start/End: Complemental strand, 10332 - 10239
Alignment:
Q  378 cgattttgccccctatacttttccccctttctaattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgc 471  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||   ||| |||||||||| |||| |||||||||||||||||| |||||||||    
T  10332 cgattttgcaccctatagttttccccctttctgattttatggtccccataacatttagtgttgatatgtctgttttttatcaatcaatgtgtgc 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 10370 - 10320
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccc 361  Q
    ||||||| |||||||||||| |||||||||||||||||  ||||||||||||    
T  10370 gcttaatagcacttttcccc-tatagtttgccaattgtccgattttgcaccc 10320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 310 - 470
Target Start/End: Original strand, 50076 - 50234
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||| |||| ||||||||||||||||||||| || |||| |||||||||    
T  50076 gcttaattgcacttt-ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctgtagtttt-cccctttct 50173  T
Q  410 aattttatggttttcatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtg 470  Q
     ||||||||||    |||||||||||||||||| |||||||||||||||||||||||||||    
T  50174 gattttatggtccctatgacatttagtgctgatatgtctgttttttatcaattaatgtgtg 50234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 310 - 442
Target Start/End: Complemental strand, 50559 - 50426
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgca-ccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||| |||||||| ||||||||||||||| ||| |||||||||    
T  50559 gcttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctttc 50460  T
Q  409 taattttatggttttcatgacatttagtgctgat 442  Q
    | ||||||||||   ||||||||||| |||||||    
T  50459 tgattttatggtccccatgacatttaatgctgat 50426  T

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Target: scaffold0176 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 440
Target Start/End: Original strand, 19622 - 19752
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttct 409  Q
    ||||||||||| |||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||  |||||||||    
T  19622 gcttaattgcaattttccccatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttctcccctttct 19721  T
Q  410 aattttatggttttcatgacatttagtgctg 440  Q
    |||||||||||   ||||||||||| |||||    
T  19722 aattttatggtccccatgacatttaatgctg 19752  T

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Target: scaffold0176; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 310 - 470
Target Start/End: Complemental strand, 20096 - 19935
Alignment:
Q  310 gcttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||||| |||||| |||| ||||   |||||||||||||||||  |||||||||||     
T  20096 gcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaactgacgattttgccccctata-gtttccccctttt 19998  T
Q  409 taattttatggttttcatgacatttagtgctgatgtgtctg-ttttttatcaattaatgtgtg 470  Q
    | ||||||||||    ||||||||||||| |||| |||||| |||||||||||||||||||||    
T  19997 tgattttatggtccctatgacatttagtgttgatatgtctgtttttttatcaattaatgtgtg 19935  T

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Target: scaffold0328 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 414
Target Start/End: Complemental strand, 6848 - 6743
Alignment:
Q  310 gcttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||    
T  6848 gcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 6749  T
Q  409 taattt 414  Q
    | ||||    
T  6748 tgattt 6743  T

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Target: scaffold0328; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 414
Target Start/End: Original strand, 6153 - 6258
Alignment:
Q  310 gcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccattgtttaaaacgagcgattttgccccctatacttttccccctttc 408  Q
    ||||||||||||||||| || ||||  ||||| ||||||| |||||| ||||||||  ||| ||| |||||||||||| ||| ||  |||||||||||||    
T  6153 gcttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccatatttttaaatgagcgattttgcaccccatctttttccccctttc 6252  T
Q  409 taattt 414  Q
    | ||||    
T  6253 tgattt 6258  T

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Target: scaffold0110 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 45859 - 45807
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  45859 gcttaattgcacttttccccctatcttttgccaattgtgcgattttgcacccc 45807  T

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Target: scaffold0110; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 45538 - 45587
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcac 359  Q
    ||||||||||||||||||||||||  ||||  ||||||| ||||||||||    
T  45538 gcttaattgcacttttccccctatcttttgttaattgtgcgattttgcac 45587  T

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Target: scaffold1221 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 1507 - 1566
Alignment:
Q  305 ttttagcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccat 364  Q
    |||| |||||||||||||||| || ||||  |||||||||||||||||||||||||||||    
T  1507 ttttggcttaattgcactttttcctctatcttttgccaattgtgtgattttgcaccccat 1566  T

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Target: scaffold0319 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 6749 - 6697
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||||||  ||||| ||||||| |||||||||||||    
T  6749 gcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacccc 6697  T

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Target: scaffold0319; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 6395 - 6448
Alignment:
Q  310 gcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||||||| ||||||||  ||||| ||||||| |||||||||||||    
T  6395 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 6448  T

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Target: scaffold0802 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 1473 - 1420
Alignment:
Q  310 gcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  1473 gcttaattgcactttttccccctatcttttgccaattgtgcgattttgcacccc 1420  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 411924 - 411976
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||| ||||||||  |||| |||||||| |||||||||||||    
T  411924 gcttaattgcactttaccccctatcttttgtcaattgtgcgattttgcacccc 411976  T

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Target: scaffold0376 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 369
Target Start/End: Original strand, 7456 - 7515
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccattgttt 369  Q
    |||||||||||||||| |||||||  ||||| |||| || ||||||||||||||| ||||    
T  7456 gcttaattgcactttttcccctatcttttgctaattatgcgattttgcaccccatcgttt 7515  T

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Target: scaffold0376; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 7652 - 7600
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||||||||||||||| |||||||  ||||| ||||||| ||||||| |||||    
T  7652 gcttaattgcactttttcccctatcttttgctaattgtgcgattttgtacccc 7600  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 17208 - 17158
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacc 360  Q
    ||||||||||||||||||||||||  ||||| |||||||  ||||||||||    
T  17208 gcttaattgcacttttccccctatcttttgctaattgtgcaattttgcacc 17158  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 438926 - 438984
Alignment:
Q  305 ttttagcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    |||| |||||||||||||||| ||||||||  ||||| ||||||| |||||||||||||    
T  438926 ttttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 438984  T

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Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 183367 - 183416
Alignment:
Q  312 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccc 361  Q
    ||||||||||||||||||||||  |||| |||||||  ||||||||||||    
T  183367 ttaattgcacttttccccctatcttttgtcaattgtacgattttgcaccc 183416  T

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Target: scaffold0192 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 25422 - 25369
Alignment:
Q  310 gcttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||    
T  25422 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 25369  T

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Target: scaffold0598 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 6928 - 6877
Alignment:
Q  309 agcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccc 361  Q
    |||||||||||||||| ||||||||  |||||||||||||  |||||||||||    
T  6928 agcttaattgcactttcccccctatcttttgccaattgtg-cattttgcaccc 6877  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 205688 - 205740
Alignment:
Q  310 gcttaattgcacttttccccctatagtttgccaattgtgtgattttgcacccc 362  Q
    ||||||||||| ||||| ||||||  ||||| ||||||| |||||||||||||    
T  205688 gcttaattgcatttttctccctatcttttgctaattgtgcgattttgcacccc 205740  T

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