View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18249_low_10 (Length: 387)

Name: NF18249_low_10
Description: NF18249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18249_low_10
NF18249_low_10
[»] chr6 (32 HSPs)
chr6 (17-315)||(29519290-29519578)
chr6 (106-309)||(4508168-4508371)
chr6 (17-309)||(23406798-23407090)
chr6 (17-315)||(3717142-3717440)
chr6 (31-301)||(29289499-29289770)
chr6 (17-310)||(2813089-2813381)
chr6 (22-308)||(13800894-13801178)
chr6 (95-280)||(7734221-7734406)
chr6 (93-315)||(2539529-2539750)
chr6 (24-310)||(17264419-17264704)
chr6 (17-254)||(1945451-1945686)
chr6 (117-310)||(5699666-5699860)
chr6 (17-261)||(24604275-24604519)
chr6 (17-244)||(14587491-14587717)
chr6 (93-310)||(5638940-5639156)
chr6 (150-310)||(21514896-21515056)
chr6 (130-306)||(34528554-34528730)
chr6 (28-293)||(9905131-9905392)
chr6 (97-234)||(236875-237012)
chr6 (174-262)||(32044540-32044628)
chr6 (189-292)||(3365838-3365941)
chr6 (95-310)||(14037830-14038043)
chr6 (97-308)||(16450295-16450506)
chr6 (118-234)||(6704067-6704183)
chr6 (139-222)||(17500989-17501072)
chr6 (193-240)||(8435259-8435306)
chr6 (189-295)||(10310311-10310417)
chr6 (113-222)||(17501173-17501287)
chr6 (17-169)||(32035115-32035261)
chr6 (189-244)||(4893314-4893369)
chr6 (116-158)||(33738988-33739030)
chr6 (237-310)||(7412971-7413044)
[»] chr4 (64 HSPs)
chr4 (17-310)||(25491260-25491552)
chr4 (17-315)||(8106402-8106701)
chr4 (93-315)||(2505891-2506112)
chr4 (17-315)||(19835530-19835827)
chr4 (106-315)||(38536268-38536478)
chr4 (93-315)||(40703750-40703971)
chr4 (106-315)||(17932997-17933206)
chr4 (17-315)||(25752303-25752601)
chr4 (51-302)||(31582295-31582545)
chr4 (115-310)||(53893891-53894085)
chr4 (24-310)||(41412963-41413249)
chr4 (17-315)||(48318924-48319222)
chr4 (17-235)||(3703189-3703407)
chr4 (21-315)||(41322952-41323251)
chr4 (17-315)||(46440132-46440431)
chr4 (17-309)||(55052484-55052776)
chr4 (113-315)||(6003533-6003735)
chr4 (106-315)||(7931755-7931963)
chr4 (113-315)||(34972969-34973171)
chr4 (113-315)||(32441915-32442117)
chr4 (22-289)||(7863457-7863722)
chr4 (135-310)||(25538843-25539019)
chr4 (120-310)||(27741978-27742169)
chr4 (113-315)||(49397113-49397318)
chr4 (95-306)||(14474081-14474291)
chr4 (113-315)||(6228673-6228875)
chr4 (188-315)||(54631352-54631479)
chr4 (138-315)||(52089315-52089492)
chr4 (93-308)||(37222046-37222260)
chr4 (117-252)||(27879657-27879792)
chr4 (189-308)||(47456781-47456900)
chr4 (121-234)||(47784101-47784214)
chr4 (113-207)||(49002822-49002916)
chr4 (17-162)||(29822629-29822773)
chr4 (94-168)||(38416913-38416987)
chr4 (203-315)||(29822775-29822887)
chr4 (151-235)||(47873953-47874037)
chr4 (94-280)||(1788080-1788269)
chr4 (113-215)||(25140675-25140777)
chr4 (113-254)||(372024-372167)
chr4 (17-169)||(23523916-23524068)
chr4 (137-215)||(25140466-25140544)
chr4 (113-234)||(42497817-42497938)
chr4 (94-222)||(32600927-32601054)
chr4 (17-149)||(18487690-18487824)
chr4 (153-222)||(25140875-25140944)
chr4 (63-234)||(346107-346276)
chr4 (94-137)||(7863323-7863366)
chr4 (151-222)||(27181474-27181544)
chr4 (189-304)||(48095738-48095853)
chr4 (97-234)||(37770001-37770139)
chr4 (214-308)||(49001427-49001521)
chr4 (106-152)||(54631485-54631531)
chr4 (189-262)||(46381081-46381154)
chr4 (193-234)||(48629501-48629542)
chr4 (113-151)||(46381202-46381239)
chr4 (104-234)||(55433648-55433778)
chr4 (115-148)||(3425647-3425680)
chr4 (189-234)||(20078729-20078774)
chr4 (139-212)||(42660338-42660411)
chr4 (17-79)||(51011391-51011455)
chr4 (113-182)||(53836211-53836280)
chr4 (189-234)||(55838933-55838978)
chr4 (105-145)||(13993301-13993341)
[»] chr3 (60 HSPs)
chr3 (17-315)||(3902666-3902963)
chr3 (17-310)||(50716254-50716547)
chr3 (17-310)||(50796300-50796593)
chr3 (24-315)||(3351926-3352216)
chr3 (17-315)||(34821203-34821500)
chr3 (17-315)||(38977608-38977905)
chr3 (28-315)||(51258415-51258703)
chr3 (17-310)||(30721676-30721966)
chr3 (106-315)||(52777321-52777530)
chr3 (106-315)||(28873095-28873305)
chr3 (117-280)||(501036-501199)
chr3 (106-315)||(35142164-35142372)
chr3 (106-315)||(39149899-39150108)
chr3 (126-310)||(47123136-47123320)
chr3 (113-315)||(43472828-43473031)
chr3 (113-315)||(2358482-2358684)
chr3 (17-262)||(51540527-51540771)
chr3 (126-310)||(47130502-47130686)
chr3 (51-310)||(49096091-49096350)
chr3 (17-315)||(47302021-47302318)
chr3 (94-303)||(51492877-51493087)
chr3 (106-226)||(33438611-33438731)
chr3 (106-315)||(46622655-46622853)
chr3 (117-315)||(47739793-47739990)
chr3 (62-262)||(5127812-5128011)
chr3 (54-280)||(29048381-29048607)
chr3 (153-308)||(35345776-35345931)
chr3 (191-315)||(3938357-3938481)
chr3 (54-206)||(45712053-45712205)
chr3 (151-254)||(46624855-46624958)
chr3 (93-234)||(27143357-27143497)
chr3 (103-234)||(29035885-29036017)
chr3 (93-308)||(54229764-54229979)
chr3 (113-306)||(40062476-40062669)
chr3 (113-200)||(3937476-3937563)
chr3 (50-252)||(14828842-14829042)
chr3 (53-211)||(47979970-47980128)
chr3 (113-234)||(47769359-47769480)
chr3 (100-187)||(29035798-29035885)
chr3 (117-210)||(26053485-26053579)
chr3 (62-234)||(34010030-34010203)
chr3 (153-222)||(8735530-8735599)
chr3 (153-222)||(9087771-9087840)
chr3 (113-222)||(33842027-33842136)
chr3 (218-310)||(33439383-33439475)
chr3 (62-234)||(43420071-43420243)
chr3 (179-254)||(4300201-4300276)
chr3 (121-230)||(46555445-46555554)
chr3 (106-310)||(50384340-50384545)
chr3 (189-310)||(51816387-51816508)
chr3 (17-81)||(35345956-35346020)
chr3 (54-149)||(11266306-11266401)
chr3 (103-234)||(26464913-26465044)
chr3 (203-306)||(40062241-40062344)
chr3 (140-203)||(45244514-45244577)
chr3 (108-209)||(512214-512315)
chr3 (22-106)||(51816251-51816335)
chr3 (29-68)||(8735197-8735236)
chr3 (29-68)||(9087438-9087477)
chr3 (139-200)||(32025111-32025172)
[»] chr8 (50 HSPs)
chr8 (17-310)||(17119744-17120037)
chr8 (17-315)||(27927801-27928098)
chr8 (17-303)||(44106225-44106510)
chr8 (17-310)||(8885318-8885610)
chr8 (107-315)||(3094776-3094984)
chr8 (95-295)||(40392615-40392815)
chr8 (93-310)||(42280756-42280972)
chr8 (117-315)||(28916876-28917074)
chr8 (93-315)||(34853406-34853627)
chr8 (108-315)||(11698176-11698383)
chr8 (84-315)||(14163917-14164147)
chr8 (113-315)||(36165697-36165900)
chr8 (113-315)||(9073601-9073803)
chr8 (50-262)||(4259550-4259760)
chr8 (134-310)||(40328015-40328191)
chr8 (113-315)||(31519752-31519954)
chr8 (17-308)||(6395085-6395376)
chr8 (113-310)||(21004486-21004679)
chr8 (17-222)||(16310601-16310805)
chr8 (17-310)||(1076554-1076849)
chr8 (106-207)||(40994882-40994983)
chr8 (136-306)||(36980689-36980859)
chr8 (118-303)||(28423523-28423707)
chr8 (62-303)||(36317837-36318083)
chr8 (17-222)||(37248560-37248764)
chr8 (54-234)||(1373978-1374158)
chr8 (159-306)||(34645520-34645667)
chr8 (116-210)||(7982478-7982572)
chr8 (54-308)||(10840625-10840880)
chr8 (113-222)||(33472168-33472277)
chr8 (117-222)||(33472379-33472484)
chr8 (113-222)||(10833468-10833577)
chr8 (120-306)||(7981618-7981804)
chr8 (113-222)||(31234471-31234580)
chr8 (153-215)||(9845323-9845385)
chr8 (116-208)||(8621606-8621697)
chr8 (113-196)||(9845490-9845573)
chr8 (55-169)||(35677172-35677286)
chr8 (137-222)||(24627903-24627988)
chr8 (17-77)||(24627569-24627629)
chr8 (139-203)||(24627697-24627761)
chr8 (113-253)||(39093605-39093745)
chr8 (140-215)||(31234689-31234764)
chr8 (17-68)||(33472069-33472120)
chr8 (153-222)||(41530812-41530881)
chr8 (115-169)||(32504309-32504363)
chr8 (153-210)||(7965935-7965992)
chr8 (85-134)||(7982422-7982471)
chr8 (116-168)||(7966005-7966057)
chr8 (17-81)||(35676631-35676695)
[»] chr5 (61 HSPs)
chr5 (17-315)||(32841831-32842129)
chr5 (17-315)||(38871635-38871932)
chr5 (63-315)||(20891623-20891873)
chr5 (17-315)||(15799189-15799486)
chr5 (17-310)||(33487574-33487867)
chr5 (17-315)||(39524740-39525037)
chr5 (45-308)||(13908539-13908802)
chr5 (93-315)||(31221199-31221420)
chr5 (106-315)||(31928985-31929193)
chr5 (17-315)||(6156695-6156992)
chr5 (23-309)||(29862582-29862868)
chr5 (116-315)||(37183641-37183840)
chr5 (106-315)||(7884245-7884455)
chr5 (54-310)||(26095092-26095348)
chr5 (93-315)||(38692643-38692864)
chr5 (93-309)||(4064585-4064801)
chr5 (106-315)||(15957801-15958010)
chr5 (106-315)||(28083238-28083447)
chr5 (50-310)||(40613540-40613800)
chr5 (94-303)||(12847483-12847692)
chr5 (17-310)||(27212672-27212960)
chr5 (17-315)||(38372273-38372562)
chr5 (95-310)||(23269375-23269593)
chr5 (101-305)||(24203554-24203758)
chr5 (17-308)||(6800794-6801085)
chr5 (17-315)||(40619845-40620147)
chr5 (17-306)||(27158049-27158336)
chr5 (134-315)||(14111947-14112126)
chr5 (17-305)||(11186046-11186333)
chr5 (140-310)||(12464984-12465154)
chr5 (94-226)||(26093486-26093618)
chr5 (17-208)||(26190265-26190455)
chr5 (188-315)||(26898663-26898790)
chr5 (106-197)||(25747077-25747168)
chr5 (94-195)||(1350290-1350391)
chr5 (53-305)||(18514801-18515053)
chr5 (113-213)||(8738947-8739047)
chr5 (17-215)||(8739148-8739350)
chr5 (113-222)||(16429341-16429450)
chr5 (113-308)||(26622172-26622364)
chr5 (105-280)||(41639385-41639563)
chr5 (95-234)||(41253341-41253480)
chr5 (137-222)||(28445162-28445247)
chr5 (117-213)||(21070429-21070525)
chr5 (17-222)||(27494106-27494312)
chr5 (131-222)||(8973562-8973653)
chr5 (189-308)||(33901094-33901213)
chr5 (139-222)||(34530300-34530383)
chr5 (113-215)||(16429131-16429233)
chr5 (97-172)||(4027980-4028056)
chr5 (139-222)||(28445358-28445441)
chr5 (146-222)||(38641026-38641102)
chr5 (54-149)||(9439480-9439575)
chr5 (131-222)||(27493902-27493993)
chr5 (120-253)||(3435321-3435454)
chr5 (51-110)||(8032269-8032328)
chr5 (54-147)||(14001684-14001778)
chr5 (256-305)||(31561646-31561695)
chr5 (137-222)||(34530117-34530201)
chr5 (218-310)||(26093620-26093712)
chr5 (146-222)||(38640818-38640894)
[»] chr2 (43 HSPs)
chr2 (17-310)||(5507418-5507713)
chr2 (106-315)||(32187724-32187933)
chr2 (62-315)||(41203041-41203294)
chr2 (17-310)||(39447164-39447456)
chr2 (17-315)||(42894379-42894676)
chr2 (106-315)||(15994968-15995177)
chr2 (17-274)||(8388650-8388909)
chr2 (94-310)||(34517179-34517395)
chr2 (106-315)||(41510284-41510492)
chr2 (93-262)||(44465635-44465803)
chr2 (93-310)||(33452303-33452519)
chr2 (50-306)||(19109879-19110134)
chr2 (17-263)||(36874987-36875232)
chr2 (17-310)||(41854764-41855051)
chr2 (24-253)||(45153708-45153936)
chr2 (113-315)||(16750284-16750484)
chr2 (17-263)||(17474706-17474951)
chr2 (121-315)||(25217629-25217825)
chr2 (32-310)||(30763660-30763943)
chr2 (116-262)||(36948853-36948999)
chr2 (62-307)||(35250977-35251221)
chr2 (17-210)||(38066633-38066825)
chr2 (163-315)||(38308687-38308840)
chr2 (93-308)||(26228143-26228358)
chr2 (133-306)||(33440374-33440546)
chr2 (97-222)||(41204013-41204138)
chr2 (189-306)||(45293813-45293930)
chr2 (104-310)||(42478831-42479037)
chr2 (113-222)||(17766777-17766886)
chr2 (204-315)||(38065432-38065543)
chr2 (122-310)||(32069099-32069286)
chr2 (146-222)||(34519485-34519561)
chr2 (17-81)||(38308882-38308946)
chr2 (130-241)||(34817215-34817326)
chr2 (146-222)||(9847160-9847236)
chr2 (55-133)||(17132768-17132846)
chr2 (54-128)||(27900674-27900748)
chr2 (157-251)||(37773735-37773829)
chr2 (103-234)||(33833842-33833969)
chr2 (97-230)||(9693427-9693562)
chr2 (146-222)||(9847368-9847444)
chr2 (101-151)||(12885447-12885497)
chr2 (118-151)||(45293743-45293776)
[»] chr1 (45 HSPs)
chr1 (17-315)||(34006261-34006560)
chr1 (125-315)||(41584525-41584715)
chr1 (106-315)||(49677573-49677782)
chr1 (17-310)||(24472692-24472987)
chr1 (17-310)||(42545969-42546262)
chr1 (113-315)||(45046710-45046912)
chr1 (106-315)||(52744703-52744912)
chr1 (31-315)||(28866490-28866774)
chr1 (113-315)||(7011307-7011509)
chr1 (16-315)||(40907794-40908092)
chr1 (113-315)||(33611270-33611472)
chr1 (106-310)||(15069707-15069910)
chr1 (118-309)||(17000480-17000672)
chr1 (24-315)||(23442747-23443037)
chr1 (93-315)||(27794909-27795129)
chr1 (17-305)||(34162591-34162878)
chr1 (125-315)||(45567750-45567940)
chr1 (113-315)||(49786365-49786567)
chr1 (54-310)||(3561200-3561457)
chr1 (17-229)||(32817557-32817768)
chr1 (113-308)||(18583411-18583606)
chr1 (68-315)||(26723348-26723595)
chr1 (106-302)||(40650548-40650744)
chr1 (113-251)||(44573021-44573158)
chr1 (93-303)||(38885305-38885500)
chr1 (15-310)||(6223616-6223897)
chr1 (97-305)||(42928963-42929173)
chr1 (17-315)||(25563274-25563561)
chr1 (96-234)||(8704459-8704597)
chr1 (139-222)||(9445839-9445922)
chr1 (113-179)||(32542490-32542556)
chr1 (94-234)||(890592-890732)
chr1 (189-308)||(45879976-45880095)
chr1 (113-215)||(9446055-9446157)
chr1 (54-149)||(5210305-5210400)
chr1 (115-234)||(26230150-26230269)
chr1 (139-222)||(43318933-43319016)
chr1 (146-222)||(800545-800621)
chr1 (192-234)||(38159001-38159043)
chr1 (146-234)||(11844407-11844495)
chr1 (146-222)||(43319144-43319220)
chr1 (151-222)||(8364143-8364213)
chr1 (103-234)||(5284261-5284392)
chr1 (268-315)||(44572960-44573007)
chr1 (17-81)||(800895-800959)
[»] chr7 (48 HSPs)
chr7 (17-262)||(28230381-28230625)
chr7 (93-311)||(36468401-36468618)
chr7 (17-315)||(24690193-24690491)
chr7 (17-309)||(42925506-42925798)
chr7 (17-310)||(31985382-31985677)
chr7 (17-315)||(19225458-19225755)
chr7 (117-302)||(9151897-9152082)
chr7 (106-309)||(42864968-42865171)
chr7 (106-315)||(36629295-36629502)
chr7 (17-302)||(36946165-36946449)
chr7 (24-315)||(36408380-36408670)
chr7 (106-315)||(33151298-33151501)
chr7 (99-309)||(1518790-1519000)
chr7 (17-302)||(3936110-3936394)
chr7 (113-310)||(3304623-3304820)
chr7 (62-234)||(5278310-5278482)
chr7 (130-315)||(19818494-19818679)
chr7 (17-315)||(8154901-8155198)
chr7 (94-306)||(6467009-6467221)
chr7 (17-315)||(47202496-47202786)
chr7 (17-230)||(24042132-24042345)
chr7 (113-315)||(31643138-31643339)
chr7 (17-310)||(7115135-7115428)
chr7 (106-235)||(37518235-37518364)
chr7 (113-315)||(33573903-33574105)
chr7 (17-261)||(39581740-39581984)
chr7 (174-315)||(43737240-43737381)
chr7 (29-161)||(6467711-6467843)
chr7 (189-306)||(37398760-37398877)
chr7 (17-234)||(43185796-43186000)
chr7 (17-244)||(16983673-16983898)
chr7 (116-211)||(48775710-48775803)
chr7 (204-315)||(26555017-26555128)
chr7 (124-214)||(8214462-8214552)
chr7 (113-222)||(8214243-8214352)
chr7 (118-211)||(48776175-48776268)
chr7 (54-230)||(25613058-25613234)
chr7 (97-304)||(48705870-48706077)
chr7 (146-210)||(5730941-5731005)
chr7 (146-222)||(16278236-16278312)
chr7 (247-315)||(24042056-24042124)
chr7 (223-315)||(37518123-37518215)
chr7 (21-134)||(48775588-48775703)
chr7 (30-81)||(8214597-8214648)
chr7 (94-149)||(47239630-47239685)
chr7 (146-215)||(5731145-5731214)
chr7 (124-169)||(16278423-16278468)
chr7 (93-129)||(37217536-37217572)
[»] scaffold0027 (1 HSPs)
scaffold0027 (117-316)||(141823-142021)
[»] scaffold0508 (1 HSPs)
scaffold0508 (24-310)||(3259-3545)
[»] scaffold0137 (1 HSPs)
scaffold0137 (17-307)||(9365-9654)
[»] scaffold0010 (1 HSPs)
scaffold0010 (151-310)||(140620-140779)
[»] scaffold0182 (1 HSPs)
scaffold0182 (142-217)||(23228-23303)
[»] scaffold0564 (1 HSPs)
scaffold0564 (116-310)||(4471-4665)
[»] scaffold0006 (2 HSPs)
scaffold0006 (117-207)||(59938-60028)
scaffold0006 (128-207)||(59472-59551)
[»] scaffold0016 (1 HSPs)
scaffold0016 (139-222)||(205759-205842)
[»] scaffold0466 (1 HSPs)
scaffold0466 (102-234)||(8780-8911)
[»] scaffold0091 (1 HSPs)
scaffold0091 (93-234)||(2004-2145)
[»] scaffold0014 (1 HSPs)
scaffold0014 (102-230)||(100858-100986)


Alignment Details
Target: chr6 (Bit Score: 156; Significance: 9e-83; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 29519290 - 29519578
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||||| |||| |||||||||| |||||| |||||||||||| ||||||||||||  |||||| || ||| ||  |||||||||          ||||    
T  29519290 aatccgaacactttaaaaaatagggtgcgctgtttgattttttcagattatataatttaaacaccccaaaaacaccatttttcaag----------ttcg 29519379  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  29519380 gattatataatatgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggaaaatattaatcttcctaactatcatccttc 29519479  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    | ||||||||||||||||| |||||||  ||||||||| ||||||| || |||||||||| |||  |||||||||||| ||||||||||||||||||||    
T  29519480 tattttgggtcattgttacgtgttcttggtcaaaaatcgggttttcgagctacttgatcaaattgctccgaaacttcctcagaaaatcagaaaatattc 29519578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 106 - 309
Target Start/End: Complemental strand, 4508371 - 4508168
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| || ||||||||| ||| ||||||||||||||||||    
T  4508371 aaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaac 4508272  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    | ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||  | ||||||||  ||||  |||||||||||| ||||||||||    
T  4508271 tttcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgattggattgctccgaaacttccgcagaaaatca 4508172  T
Q  306 gaaa 309  Q
    ||||    
T  4508171 gaaa 4508168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 17 - 309
Target Start/End: Original strand, 23406798 - 23407090
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||| || ||||| |||   ||||| ||||| || | ||| | |||| ||  |||||||||| |||| || ||||    
T  23406798 aatccggaaacttcaaaaaatagggcgcgttagttgatgtttctggattacataatccggaaaccccctaaacaccatttttcaaggtaaaa-cagttcg 23406896  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||    
T  23406897 aattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 23406996  T
Q  217 tg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 309  Q
     | |||||||||||| |||| |||||||| |||||||||| ||||||  | ||||||||  ||||  |||||||||||||||||||||||||||    
T  23406997 cgtttttgggtcattattacttgttcttagtcaaaaatcaagttttcgggctacttgatttgattgctccgaaacttccccagaaaatcagaaa 23407090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 3717440 - 3717142
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||| ||||  ||| ||  |||| ||| | |||||||||||  | | ||||| |||| ||  |||||||||| |||| || ||||    
T  3717440 aatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattatataatctggaaacctcctaaacacaatttttcaaggtaaaa-cagttcg 3717342  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||| || ||||||||| ||| ||||||||| || ||||||||||||||||    
T  3717341 gattatataatccgaactgtatcatcacaaattctaaacatgtctgtaacatggatagtcattttagggacaatattaatttttctaactctcatccttc 3717242  T
Q  217 tg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    || |||||||||||||||||||||||||| ||||||||| ||||||||   ||||||||| ||||  |||||||| |||||| |||||||||||| ||||    
T  3717241 tgtttttgggtcattgttacatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacatccccaaaaaatcagaaaaaattc 3717142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 31 - 301
Target Start/End: Complemental strand, 29289770 - 29289499
Alignment:
Q  31 aaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactcttttt-caagggaaaaacacttcggattatataatcc 129  Q
    |||||||||||  ||||||||||||||| | |||||||||||  ||||||| | |||| ||  ||||| |||| |||||||| ||||||||||||||||     
T  29289770 aaaaaataggacacgctatttgatttttccggattatataatctgaacaccccttaaacaccattttttcaagtgaaaaacaattcggattatataatct 29289671  T
Q  130 gaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcat 229  Q
    |||||||||||||||||||| | ||||| ||||||||||  ||  | |||||||||| ||||||||| |||||||||| |||||||||||||| ||||||    
T  29289670 gaactgtatcagcacaaattatgaacatctttgtaacatagatattaattttatggacaatattaattttcctaactcgcatccttctgttttaggtcat 29289571  T
Q  230 tgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaa 301  Q
    ||||| ||||||||| |||||||||||||||||  | |||||||||| |||  |||||||||||||||||||    
T  29289570 tgttagatgttcttagtcaaaaatcaggttttcgtgctacttgatcaaattgctccgaaacttccccagaaa 29289499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 2813381 - 2813089
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| ||||||||||||||| | || | ||  |||| ||| | ||||| ||||| || | ||| | |||| || ||||||||||| |||| |  ||||    
T  2813381 aatccggaaacttcaaaaaataaggtgtgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa-cggttcg 2813283  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||| |||||||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  2813282 gat-atataatccgaactgtatcaccacaaattctaaacatatttttaacatgaatagtcattttatggataatattaatcttcctaactctcatccttc 2813184  T
Q  217 tg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
     | ||||||||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  ||||||||||||||||||||||||||||    
T  2813183 cgtttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaa 2813089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 22 - 308
Target Start/End: Complemental strand, 13801178 - 13800894
Alignment:
Q  22 gaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggatta 121  Q
    |||||||||||||| ||||  |||| ||||||||||||| ||||||||||| |||||||| | |||| || ||||| ||||| || |||| |||||||||    
T  13801178 gaaaacttcaaaaa-tagggcgcgccatttgattttttcagattatataatccgaacaccccttaaacaccctttt-caaggaaagaacagttcggatta 13801081  T
Q  122 tataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttt 221  Q
     |||||| ||||||||| |||| ||||||||||||||||||||||||  ||| |||||||||| | ||||||||||||||||||||||||| || |||||    
T  13801080 cataatcggaactgtattagcataaattctaaacatgtttgtaacatagattatcattttatgaacaatattaatcttcctaactctcatcattatgttt 13800981  T
Q  222 tgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 308  Q
    |||||||||||||  |||||||| ||||||||| | ||||  |  ||||||||| ||||  |||||||||| || ||||||||||||    
T  13800980 tgggtcattgttagttgttcttagtcaaaaatcggatttttgaactacttgatcggattgctccgaaacttgcctagaaaatcagaa 13800894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 95 - 280
Target Start/End: Complemental strand, 7734406 - 7734221
Alignment:
Q  95 ttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatta 194  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  7734406 ttttcaaggaaaaaacagttcagattatataattcgaactgtatcaatacaaattctaaacatgtttgtaacacgaattgtcattttatggacaatatta 7734307  T
Q  195 atcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagatt 280  Q
    |||||||||||| |||||||| |||||||| |||||||||  |||||||  |||||||||||||||||  | ||||||||||||||    
T  7734306 atcttcctaactatcatccttttgttttggatcattgttatctgttcttgatcaaaaatcaggttttcgggctacttgatcagatt 7734221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 93 - 315
Target Start/End: Original strand, 2539529 - 2539750
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| || ||||||||| ||| |||||    
T  2539529 ctttttcaaggtaaaa-cagttcggattatataatccgaactctatccgcacaaattctgaacatgtttgtaacatggatagtcattttagggacaatat 2539627  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| || | ||||| |  ||||||    ||||||||| ||||  ||||||||||    
T  2539628 taatcttcctaactctcatccttctgttttgggtcattgttacctattcgtagttaaaaaccgagttttcggactacttgatcggattgctccgaaactt 2539727  T
Q  293 ccccagaaaatcagaaaatattc 315  Q
     ||||||||||||||||| ||||    
T  2539728 gcccagaaaatcagaaaaaattc 2539750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 24 - 310
Target Start/End: Original strand, 17264419 - 17264704
Alignment:
Q  24 aaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattata 123  Q
    |||||||||||||||||  ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| || ||||||||||| ||||  | |||||||||||    
T  17264419 aaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaat-agttcggattata 17264517  T
Q  124 taatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttg 223  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||  | ||||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  17264518 taatctgaactgtatcagcacaaattctaaacatgtttgcaacatggttagtcattttagggacaatatttatcttcctaactctcatccttctgttttg 17264617  T
Q  224 ggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
     ||||||||||| |||||||| | ||||||   |||||   | ||||||||  ||||  ||||||||||||||||||||||||||||    
T  17264618 cgtcattgttacctgttcttagttaaaaattgagtttttgggctacttgatgggattgctccgaaacttccccagaaaatcagaaaa 17264704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 1945686 - 1945451
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||||||||||| |||| |||| ||  | | |||| | |||||||||||  ||||||| | ||||  |  ||||||||| ||||| || |||     
T  1945686 aatccgaaaacttcaaaaactagggtgcgttacataaattttccggattatataatctgaacacccc-taaaccccatttttcaagtgaaaa-caattca 1945589  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||    
T  1945588 gattatataatccgaactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttagggataatattaatcttcctaactctcatccttc 1945489  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatc 254  Q
    ||||||||| ||||||||| |||| ||| |||||||||    
T  1945488 tgttttgggacattgttacctgtttttattcaaaaatc 1945451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 117 - 310
Target Start/End: Original strand, 5699666 - 5699860
Alignment:
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||||||| || ||||||||| ||| ||||||||||||| |||||||||||||||    
T  5699666 gattatataatccgaactgtattaacacaaattctaaatatgtttgtaacatggatagtcattttaaggacaatattaatcttcataactctcatccttc 5699765  T
Q  217 tg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    || ||||||||||||||||| | |||||| ||||||||| || ||||    ||||||||| ||||  ||||||||||||||||||||||||||||    
T  5699766 tgtttttgggtcattgttacctattcttagtcaaaaatcgggatttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaa 5699860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 261
Target Start/End: Complemental strand, 24604519 - 24604275
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||| ||||||||||||||||||  |   ||  |||||| ||| ||||| ||||| |||||||| | |||| ||  |||||||||||||||||| |||     
T  24604519 aatccaaaaacttcaaaaaatagggcgtcttacatgatttcttcggattacataatccgaacaccccttaaacaccatttttcaagggaaaaacagttca 24604420  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
     ||||||||||| ||||| |||||||||||||||||||||| |||||||||   || |||||||||  || ||||||||||||||||||| |||||||||    
T  24604419 tattatataatctgaactctatcagcacaaattctaaacatatttgtaacaaagatagtcattttagagacaatattaatcttcctaactttcatccttc 24604320  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggtttt 261  Q
    ||||||| ||||||||||| |||||||| ||||||||| ||||||    
T  24604319 tgttttgagtcattgttacctgttcttagtcaaaaatcgggtttt 24604275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 14587717 - 14587491
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||||| ||||||||||  ||| ||  |||| ||| ||||||| ||||| |  | ||| | |||| ||  |||||||||| |||| || ||||    
T  14587717 aatccgaaaactttaaaaaatagggcgcgttacatgatgtttcctgattacataatccataaaccccctaaacaccatttttcaaggtaaaa-cagttcg 14587619  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||| ||||||     
T  14587618 gattatataatcataactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttacggacaatattaatcttcctaactctaatcctta 14587519  T
Q  217 tgttttgggtcattgttacatgttctta 244  Q
    ||||||||||||||||||||||||||||    
T  14587518 tgttttgggtcattgttacatgttctta 14587491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 93 - 310
Target Start/End: Original strand, 5638940 - 5639156
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||  || | |||| || ||| |||||    
T  5638940 ctttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacatatcataaacatgtctgtaacatatatagccattctagggacaatat 5639038  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    |||||||| ||||||| |||||| ||||||| ||||||||||| |||||||| ||||||||| ||||| |  | |||||| |||||||  || |||||||    
T  5639039 taatcttcttaactcttatccttttgttttgagtcattgttacctgttcttaatcaaaaatcgggtttccgggctacttggtcagattgctctgaaactt 5639138  T
Q  293 ccccagaaaatcagaaaa 310  Q
     |||| ||||||||||||    
T  5639139 tcccaaaaaatcagaaaa 5639156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 150 - 310
Target Start/End: Complemental strand, 21515056 - 21514896
Alignment:
Q  150 ctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaa 249  Q
    ||||| |||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||| ||||    
T  21515056 ctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctcctttgggtcattgttacctgttcttagtcaa 21514957  T
Q  250 aaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    ||||| | |||||    ||||||||| ||||  ||||||||||||||| ||||| ||||||    
T  21514956 aaatcggattttcggactacttgatcggattgctccgaaacttccccataaaattagaaaa 21514896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 306
Target Start/End: Original strand, 34528554 - 34528730
Alignment:
Q  130 gaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcat 229  Q
    |||||||||||||||||||| | ||||||||||||||||| ||  |||||| | ||| |||||||||||| ||||||||||| |||||||||||||||||    
T  34528554 gaactgtatcagcacaaattatgaacatgtttgtaacatggatattcatttcaaggataatattaatctttctaactctcattcttctgttttgggtcat 34528653  T
Q  230 tgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 306  Q
    | |||  |||||||| ||||||||| |||||||    ||||||||| ||||  ||| |||||||| || ||||||||    
T  34528654 tattagctgttcttagtcaaaaatctggttttcggtctacttgatcggattgctccaaaacttcctcataaaatcag 34528730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 28 - 293
Target Start/End: Original strand, 9905131 - 9905392
Alignment:
Q  28 ttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataat 127  Q
    |||||||||||||  ||||||  |||||||| | ||||| ||||| |||||||| | ||||  |  |  ||||||||||||| | || |||||||||||     
T  9905131 ttcaaaaaatagggcgcgctacgtgatttttccggattacataatccgaacaccccctaaacgccatcattcaagggaaaaatagtttggattatataac 9905230  T
Q  128 ccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggag-aatattaatcttcctaactctcatccttctgttttgggt 226  Q
    ||      |||||||||||||| ||||||||||||||||||| ||  |||||||| |||  ||||||||| ||||| ||||| |||||||||||||| ||    
T  9905231 cca-----tatcagcacaaattttaaacatgtttgtaacatggataatcattttagggaacaatattaattttccttactcttatccttctgttttgagt 9905325  T
Q  227 cattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttc 293  Q
    |||||||||   |||||| ||||||||| |||||||  | ||||||||| ||||  |||||||||||    
T  9905326 cattgttaccaattcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttc 9905392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 236875 - 237012
Alignment:
Q  97 ttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaat 196  Q
    ||||||| ||||| | ||||||  ||||||| |||||| |||||||||||||| | ||||||||||||||||| |   |||||||| |||  ||||||||    
T  236875 ttcaaggcaaaaataattcggacaatataattcgaactatatcagcacaaattatgaacatgtttgtaacatggaaaatcattttaaggaccatattaat 236974  T
Q  197 cttcctaactctcatccttctgttttgggtcattgtta 234  Q
    |||||||||||||||| |||| |||| |||||||||||    
T  236975 cttcctaactctcatcgttctattttaggtcattgtta 237012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 32044540 - 32044628
Alignment:
Q  174 gtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 262  Q
    ||||||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||||| |||||||| |||||||||||||||||    
T  32044540 gtcattttagggacaatattaatcttcctaactcttatccttttgttttggatcattgttacctgttcttagtcaaaaatcaggttttc 32044628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 3365838 - 3365941
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 288  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||  |||||  ||||||||||| |||||||| | |||||||||| |||  ||||||    
T  3365838 atattaatcttcctaactttcatccttctgttttaggtcattgttaattgttcacactcaaaaatccggttttcaggttacttgatcatattgctccgaa 3365937  T
Q  289 actt 292  Q
    ||||    
T  3365938 actt 3365941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 310
Target Start/End: Complemental strand, 14038043 - 14037830
Alignment:
Q  95 ttttcaagggaa-aaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatt 193  Q
    |||||||||| | ||||| |||||||||||||| |||||||||||||||||||||||| |   | ||||||||||| ||   |  ||||  ||  |||||    
T  14038043 ttttcaagggtagaaacagttcggattatataacccgaactgtatcagcacaaattctgagtctctttgtaacatggataacctgtttaaagaccatatt 14037944  T
Q  194 aatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttc 293  Q
    ||||||| ||||   |||||||||||||| |||||||||||  |||||||| |||||||||  ||||||  | ||||||||||||||  ||| |||| ||    
T  14037943 aatcttcttaac---catccttctgttttaggtcattgttagttgttcttagtcaaaaatctagttttcgtgctacttgatcagattgctccaaaacatc 14037847  T
Q  294 cccagaaaatcagaaaa 310  Q
    || | ||||| ||||||    
T  14037846 ccaataaaattagaaaa 14037830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 308
Target Start/End: Original strand, 16450295 - 16450506
Alignment:
Q  97 ttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaat 196  Q
    |||| |||||| ||| |||| |||||||||||  | |||||||| || ||||| | | | | ||||||||||| ||   || |||| |||  ||||||||    
T  16450295 ttcaggggaaatacaattcgtattatataatctaatctgtatcaacataaattttgagcttatttgtaacatggataaccagtttaaggaacatattaat 16450394  T
Q  197 cttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttcccc 296  Q
    |||||||| ||||||| || |||||| |||||||||||  |||||||| ||||||||  ||||||   | ||||||||||||||  | |||||||| ||     
T  16450395 cttcctaaatctcatcattatgttttaggtcattgttagctgttcttagtcaaaaatttggtttttgggctacttgatcagattgcttcgaaacttacct 16450494  T
Q  297 agaaaatcagaa 308  Q
    ||||||||||||    
T  16450495 agaaaatcagaa 16450506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 6704183 - 6704067
Alignment:
Q  118 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 217  Q
    ||||||||||||||||||| | ||||||||||| |||  | ||||||||||| ||    | |||| ||| ||||||||||||||||||||||||| |||     
T  6704183 attatataatccgaactgtgttagcacaaattccaaatctatttgtaacatggataactagtttaaggacaatattaatcttcctaactctcatcattcg 6704084  T
Q  218 gttttgggtcattgtta 234  Q
     |||| |||||||||||    
T  6704083 attttaggtcattgtta 6704067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 17500989 - 17501072
Alignment:
Q  139 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||| || ||| |||||||||||||||||||| ||||||||| ||| | ||||||||||||||| | |||||||| ||||||    
T  17500989 cagcaccaaatctgaacatgtttgtaacatgaatagtcattttaaggacattattaatcttcctaattttcatccttgtgtttt 17501072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 8435259 - 8435306
Alignment:
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgtt 240  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||||    
T  8435259 taatcttcctaactatcattcttctgttttaggtcattgttacatgtt 8435306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 295
Target Start/End: Complemental strand, 10310417 - 10310311
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 288  Q
    |||||||||||||||||| |||| ||||| |||| ||| ||||| |  |||||| | |||||||||   |||| | | |||||| ||||||| |||||||    
T  10310417 atattaatcttcctaactatcattcttctattttaggttattgtaagttgttctcagtcaaaaatccaatttttaggctacttggtcagattgttccgaa 10310318  T
Q  289 acttccc 295  Q
    |||||||    
T  10310317 acttccc 10310311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 17501173 - 17501287
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgt-----cattttatggagaatattaatcttcctaactc 207  Q
    |||||||||  ||||||| || | ||||| || |||||| ||||||||||||||||| || ||     ||||||| ||| |||||||||||||||| ||     
T  17501173 ttcggattacgtaatccggacagcatcaggaccaattctgaacatgtttgtaacatggatagtatagtcattttaaggacaatattaatcttcctagctt 17501272  T
Q  208 tcatccttctgtttt 222  Q
    |||||||| ||||||    
T  17501273 tcatccttgtgtttt 17501287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 169
Target Start/End: Original strand, 32035115 - 32035261
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| || |||||| |||| ||||  | ||||    
T  32035115 aatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggtaaaat-agttcg 32035213  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatg 169  Q
    ||||||||||||     ||||||||||||||| |||||||| |||||||||||    
T  32035214 gattatataatc-----tgtatcagcacaaatcctaaacatatttgtaacatg 32035261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 4893314 - 4893369
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttctta 244  Q
    |||||||||||||||| |||||||||| ||||||  ||||||||||  ||||||||    
T  4893314 atattaatcttcctaattctcatccttatgttttaagtcattgttagttgttctta 4893369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 33739030 - 33738988
Alignment:
Q  116 ggattatataatccgaactgtatcagcacaaattctaaacatg 158  Q
    |||||||||| |||||||||||| ||||| |||||||||||||    
T  33739030 ggattatatagtccgaactgtattagcacgaattctaaacatg 33738988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 310
Target Start/End: Original strand, 7412971 - 7413044
Alignment:
Q  237 tgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    ||||||||  ||||||||||||||||    || |||||| ||||  |||||||||||| |||||||||||||||    
T  7412971 tgttcttagccaaaaatcaggttttcggactagttgatcggattgctccgaaacttccacagaaaatcagaaaa 7413044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 3e-79; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 25491552 - 25491260
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||| ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| ||  |||||||||| |||| || ||||    
T  25491552 aatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccttttttcaaggtaaaa-caattcg 25491454  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  25491453 gattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcatccttc 25491354  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||     ||||||||| ||||  ||| ||| ||||||||||||||||||||    
T  25491353 tgttttgggtcattgttacatgttcttagtcaaaaatcgggtttttggactacttgatcggattgctccaaaatttccccagaaaatcagaaaa 25491260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 8106402 - 8106701
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||||||||||||||||  ||||||  |||||||| |  |||| ||||| |||||||| | |||| ||  |||||| ||||||||| | |||     
T  8106402 aatccgaaaacttcaaaaaatagggcgcgctacatgatttttccgtattacataatccgaacaccccctaaacaccatttttctagggaaaaatagttca 8106501  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcatttta-tggagaatattaatcttcctaactctcatcctt 215  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||  | | ||| |||||||| |||||||||||||||    
T  8106502 gattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagaacaatgttaatctttctaactctcatcctt 8106601  T
Q  216 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||||   | ||||||||||||||  ||||||||||||||| |||||||||||| ||||    
T  8106602 ctgttttgagtcattgttacctgttcttattcaaaaatcaggtttttgggctacttgatcagattactccgaaacttccccaaaaaatcagaaaaaattc 8106701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 93 - 315
Target Start/End: Complemental strand, 2506112 - 2505891
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || || |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||| |||||    
T  2506112 ctttttcaaggtaaaa-cagtttggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggacaatat 2506014  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||  | ||||||||| ||||  ||||||||||    
T  2506013 taatcttcctaattctcatccttctgttttgggtcattgttacatgttcttagtcaataatcgggttttcgggctacttgatcggattgctccgaaactt 2505914  T
Q  293 ccccagaaaatcagaaaatattc 315  Q
     | ||||||| ||||||| ||||    
T  2505913 tctcagaaaagcagaaaacattc 2505891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 19835530 - 19835827
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| ||||||  ||||||||| |||| ||  |||| ||| | ||||| ||||| || | ||| | |||| || ||||||||||| |||| || ||||    
T  19835530 aatccggaaactttgaaaaatagggtgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa-cagttcg 19835628  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | | ||||||||||||||||||||||||| |||    
T  19835629 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggaacaatattaatcttcctaactctcatctttc 19835728  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||| ||||||||||| |||| ||| |||||| || |||||||    ||||||||| ||||  |||||||||| ||||||||||||||||| ||||    
T  19835729 tgttttgcgtcattgttacctgtttttagtcaaaagtcgggttttcggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattc 19835827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 106 - 315
Target Start/End: Original strand, 38536268 - 38536478
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||||||||||||||||  || |||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  38536268 aaaacagttcggattatataatctaaattgtatctgcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaac 38536367  T
Q  206 tctcatccttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatc 304  Q
    ||||||  ||||| |||| ||||||||||||||||||||| |||||||||| ||||||| | ||||||||| |||| |||| |||||| |||||||||||    
T  38536368 tctcattattctgtttttaggtcattgttacatgttcttagtcaaaaatcaagttttcaggctacttgatcggattgttccaaaactttcccagaaaatc 38536467  T
Q  305 agaaaatattc 315  Q
    |||||| ||||    
T  38536468 agaaaaaattc 38536478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 93 - 315
Target Start/End: Original strand, 40703750 - 40703971
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||    
T  40703750 ctttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatat 40703848  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    ||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||| ||||||     ||||||||| ||||  |  |||||||    
T  40703849 taatcttcctaactctcatccttctgttttgggtcattgttatcttttcttagtcaaaaatcgggtttttggactacttgatcggattgctaagaaactt 40703948  T
Q  293 ccccagaaaatcagaaaatattc 315  Q
    |||||||||||||||||| ||||    
T  40703949 ccccagaaaatcagaaaaaattc 40703971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 106 - 315
Target Start/End: Complemental strand, 17933206 - 17932997
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  |||||||| ||| | ||||||||||||||||    
T  17933206 aaaacagttcggattatataatccgaacagtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacattattaatcttcctaac 17933107  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||||| ||||||    |||||||| ||||  ||||||||||| |||||||||||    
T  17933106 tctcatccttctgttttgggtcattgttacctgttcttagtaaaaaatcagattttcagaccacttgatcggattgctccgaaacttctccagaaaatca 17933007  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  17933006 gaaaaaattc 17932997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 25752601 - 25752303
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| ||| |||||||||||||  ||  ||  |||| ||| | ||||| ||||| |||| ||| |||||| || ||||||||||| |||| || ||||    
T  25752601 aatccggaaatttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaaccccataaacaccctttttcaaggtaaaa-cagttcg 25752503  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||||||||||| || ||||||||| ||| ||||| |||||||||| |||||||| ||     
T  25752502 gattatatgatccgaaatgtattagcacaaattctaaacatgtttgtaacatggatagtcattttaaggacaatatcaatcttcctagctctcatcttta 25752403  T
Q  217 tg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    || |||||||| |||||||| |||||||| ||||||||| |||||||  | ||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  25752402 tgtttttgggtgattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcagattgctccgaaacttccccagaaaatcagaaaagattc 25752303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 51 - 302
Target Start/End: Complemental strand, 31582545 - 31582295
Alignment:
Q  51 tgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattc 150  Q
    |||| ||||||||||| ||||| || | ||| | |||| || ||||||||||| |||| || |||||||||||||||| ||| |||||||||||||||||    
T  31582545 tgatgttttctgattacataatccggaaaccccctaaacaccctttttcaaggtaaaa-cagttcggattatataatctgaattgtatcagcacaaattc 31582447  T
Q  151 taaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaa 250  Q
    ||||||||||||||||||| || ||||||||||| | ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31582446 taaacatgtttgtaacatggatagtcattttatgaacaatgttaattttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaa 31582347  T
Q  251 aatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 302  Q
    ||||  ||||||  | || |||||| ||||  |||||||||| |||||||||    
T  31582346 aatctagttttcgggctaattgatcggattgctccgaaacttgcccagaaaa 31582295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 115 - 310
Target Start/End: Complemental strand, 53894085 - 53893891
Alignment:
Q  115 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||| ||||||||||||||    
T  53894085 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctttctaactctcatcct 53893986  T
Q  215 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||   ||||||||| ||||  || ||||||| || ||||||||||||||    
T  53893985 tctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaactt-ccgagaaaatcagaaaa 53893891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 24 - 310
Target Start/End: Complemental strand, 41413249 - 41412963
Alignment:
Q  24 aaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattata 123  Q
    |||||||||||||||||| ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| ||||||||| |||| ||||  | |||||||||||    
T  41413249 aaacttcaaaaaatagga-gcgttacatgatgtttccggattacataatccggaaaccccctaaacactcttttttaaggtaaaat-agttcggattata 41413152  T
Q  124 ta--atccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttt 221  Q
    ||  ||||||||||||||||||||||| |||||||| ||||||||||| || ||||||||| | | ||||||||||||||||||||| ||| || |||||    
T  41413151 tataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcattttaggaacaatattaatcttcctaactcttatcattttgttt 41413052  T
Q  222 tgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    | ||||||||||||||||||||| ||||||||| |||||||  | |||||||||||||| ||| |||||||||||| ||||||||||||    
T  41413051 taggtcattgttacatgttcttaatcaaaaatctggttttcgggctacttgatcagattgttctgaaacttccccaaaaaatcagaaaa 41412963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 48319222 - 48318924
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatac-tctttttcaagggaaaaacacttc 115  Q
    |||||| |||||||||||||||||  ||| ||  |||| |||   ||||| ||||| |||| ||| | |||| || | |||||||||| |||| ||  ||    
T  48319222 aatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatccgaaaaccccctaaacacctttttttcaaggtaaaa-cagctc 48319124  T
Q  116 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||| ||| ||||||||||||||||||||||||||||    
T  48319123 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatcctt 48319024  T
Q  216 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||||||||||||||  | |||||| | ||||||| | |||||    ||||||||| ||||  | ||||| |||||||||||||||||||| ||||    
T  48319023 ctgttttgggtcattgttatctattcttagtaaaaaatcggattttcggactacttgatcggattgcttcgaaatttccccagaaaatcagaaaaaattc 48318924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 17 - 235
Target Start/End: Complemental strand, 3703407 - 3703189
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||||||||||||||||| | | ||  |||||||||| ||||| |||||||||||||| | |||| ||  |||||||||||||||||| ||      
T  3703407 aatccgaaaacttcaaaaaataggacgtgttacatgattttttcggattacataattcgaacaccccctaaacaccatttttcaagggaaaaacagttat 3703308  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    | ||||||||| | ||||||||||||||||||||||||||| ||||||||||  || ||||||||| | ||||||||||||||| |||||||||||||||    
T  3703307 ggttatataattcaaactgtatcagcacaaattctaaacatttttgtaacatagatagtcattttaggaagaatattaatcttcataactctcatccttc 3703208  T
Q  217 tgttttgggtcattgttac 235  Q
    |||||| ||||| ||||||    
T  3703207 tgttttaggtcaatgttac 3703189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 315
Target Start/End: Complemental strand, 41323251 - 41322952
Alignment:
Q  21 cgaaaacttcaaaaaataggatgcgctatttgattttttctg------attatataattcgaacacctcataaatactctttttcaagggaaaaacactt 114  Q
    |||||||||||||||||| || ||| || |||||||||| |       ||||||||||  ||||||| | |||| || ||||||||||||||||||| ||    
T  41323251 cgaaaacttcaaaaaataagacgcgttacttgattttttttattttttattatataatcggaacacc-cttaaacaccctttttcaagggaaaaacaatt 41323153  T
Q  115 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 214  Q
    |||||||||| ||   ||| |||||| |||||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||||||||||    
T  41323152 cggattatatcattttaaccgtatcaacacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatcct 41323053  T
Q  215 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatatt 314  Q
    | |||||| |||||||||||  |||||||| | ||||||   ||||||   |||||||||| ||||  ||||||| ||||||||||||||| |||| |||    
T  41323052 tttgtttttggtcattgttaattgttcttagttaaaaattgagttttcggcatacttgatcggattgctccgaaagttccccagaaaatcataaaaaatt 41322953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 46440431 - 46440132
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||| ||||||||||| ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| || ||||||||||| |||| || ||||    
T  46440431 aatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa-cagttcg 46440333  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||  |||||||| ||| |||| |||||||| |||||||||||||||    
T  46440332 gattatataatccgaactatatcagcacaaattctaaacatggttgtaacatggatattcattttagggacaatactaatcttcataactctcatccttc 46440233  T
Q  217 tgttttgggtcattgttac--atgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatatt 314  Q
    | |||| | ||||||||||   |||||||| ||||||||| | |||||    ||||||||| ||||  |||||||||||||||||||||||||||| |||    
T  46440232 tcttttagatcattgttacctgtgttcttaatcaaaaatcggattttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaatt 46440133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 17 - 309
Target Start/End: Complemental strand, 55052776 - 55052484
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  | | ||  |||| ||| | ||||||||||| || | ||| | |||| || ||||||||||| |||| || ||||    
T  55052776 aatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattatataatccggaaaccccctaaacaccctttttcaaggtaaaa-cagttcg 55052678  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt- 215  Q
     ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| ||| ||| ||||||||||||||| ||||||||     
T  55052677 aattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatccttc 55052578  T
Q  216 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 309  Q
    |  |||| |||||||||||| |||||||| |||||||||   |||||  | ||||||||  ||||  ||||||||||||| |||||||||||||    
T  55052577 cattttttggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttccctagaaaatcagaaa 55052484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 113 - 315
Target Start/End: Complemental strand, 6003735 - 6003533
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||| ||| ||| ||| || ||||||||| ||| ||||||||||||||||||||| |||    
T  6003735 ttcggattatataatccgaactgtatcggcacaaatcataaacatatttttaatatgtatagtcattttagggataatattaatcttcctaactcttatc 6003636  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||| ||||||||||||||||||| |||||||| |||||||||||||||||  | ||||||||  ||||  || ||||||| |||| |||||||||||| |    
T  6003635 cttttgttttgggtcattgttacttgttcttagtcaaaaatcaggttttcgggctacttgattggattgctctgaaactttcccaaaaaatcagaaaaaa 6003536  T
Q  313 ttc 315  Q
    |||    
T  6003535 ttc 6003533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 106 - 315
Target Start/End: Original strand, 7931755 - 7931963
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| || || |||||| ||| ||||||||||||||||||    
T  7931755 aaaacagttcggattatataatctgaactatattagcacaaattctaaacatgtttgtaacatggatagttattttagggacaatattaatcttcctaac 7931854  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    |||||||| |||||||||||||||||||||||||| ||  |||||||||  ||||||    |||||| || ||||  | |||||||| ||||||||||||    
T  7931855 tctcatcc-tctgttttgggtcattgttacatgtttttggtcaaaaatcgagttttcggactacttggtcggattgcttcgaaactttcccagaaaatca 7931953  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  7931954 gaaaaaattc 7931963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 113 - 315
Target Start/End: Original strand, 34972969 - 34973171
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||||| |||    
T  34972969 ttcggattatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 34973068  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||| |||||| |||||||||||  |||||||| ||||||||| ||||||||   ||||||||| ||||  || |||||||||| | ||||| |||||| |    
T  34973069 cttttgttttaggtcattgttatctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttccctataaaattagaaaaaa 34973168  T
Q  313 ttc 315  Q
    |||    
T  34973169 ttc 34973171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 113 - 315
Target Start/End: Original strand, 32441915 - 32442117
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||||||||||| ||||||| ||||||| ||  ||||||| ||||||||||| ||   |||||||  || ||||||||||||||||||||| |||    
T  32441915 ttcggattatataatccaaactgtaccagcacatatcgtaaacatatttgtaacatgtataaccattttaaagacaatattaatcttcctaactcttatc 32442014  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||| ||||||||||||||||||| |||||||| |||||||||  ||||||  | ||||||||| ||||  || ||||||||||||||||||||||||| |    
T  32442015 cttttgttttgggtcattgttacctgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctctgaaacttccccagaaaatcagaaaaaa 32442114  T
Q  313 ttc 315  Q
    |||    
T  32442115 ttc 32442117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 289
Target Start/End: Original strand, 7863457 - 7863722
Alignment:
Q  22 gaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggatta 121  Q
    ||||||||||||||||| || ||| || || | ||||||  |||||| ||| |||||||| | | |  || ||||||||||| ||||||| |||||||||    
T  7863457 gaaaacttcaaaaaataagacgcgttacttaagtttttcatattatagaatccgaacaccccgtga--acactttttcaaggaaaaaacagttcggatta 7863554  T
Q  122 tataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttt 221  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||| |   |||||||| ||| ||||||||| ||||||||| | ||||||||||||    
T  7863555 tataatctgaactgtatctgcacaaattctaaacatgtttgtaacatggacaatcattttaaggacaatattaatattcctaacttttatccttctgttt 7863654  T
Q  222 tgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaa 289  Q
    | |||||||| ||  |||||||| | ||||||  |||||||  | ||||| ||||||||  |||||||    
T  7863655 taggtcattggtaactgttcttaataaaaaattcggttttcgggctacttaatcagattgctccgaaa 7863722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 135 - 310
Target Start/End: Complemental strand, 25539019 - 25538843
Alignment:
Q  135 gtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctg-ttttgggtcattgtt 233  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||| ||| ||||||||||||||| | |||||||||||||||    
T  25539019 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcttaactctcatccttccgtttttgggtcattgtt 25538920  T
Q  234 acatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    || | |||||| ||||||||  |||||||| | ||||||||  ||||  |||||||| |||||||||||||||||||    
T  25538919 acctcttcttagtcaaaaatttggttttcaggctacttgattggatttctccgaaacatccccagaaaatcagaaaa 25538843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 120 - 310
Target Start/End: Complemental strand, 27742169 - 27741978
Alignment:
Q  120 tatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggag-aatattaatcttcctaactctcatccttctg 218  Q
    ||||||||  ||| |||||||||||||||| |||||||||||||||||| ||| || |||||| |||  |||||||||||||||||||||||||||||||    
T  27742169 tatataatttgaattgtatcagcacaaattttaaacatgtttgtaacataaatagttattttagggaacaatattaatcttcctaactctcatccttctg 27742070  T
Q  219 ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    ||||| ||||||| ||||| |||||| ||||||||| |||||||  | ||||| ||| ||||  |||||||| ||||| |||||||||||||    
T  27742069 ttttgagtcattggtacattttcttagtcaaaaatcgggttttcgggctacttaatcggattgctccgaaacatcccccgaaaatcagaaaa 27741978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 113 - 315
Target Start/End: Original strand, 49397113 - 49397318
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcat----tttatggagaatattaatcttcctaactct 208  Q
    |||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||| ||   |||    |||| ||| |||||||||||||||||||||    
T  49397113 ttcggattatataaaccgaactgtatcagcaaaaatcctaaacatatttgtaacatgtataaccatccattttagggacaatattaatcttcctaactct 49397212  T
Q  209 catccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 308  Q
     |||||| ||||||| |||||||||||||||||||| ||||||||| ||||||| || ||||||||| ||||  || ||||||| |||| ||||||||||    
T  49397213 tatccttttgttttgagtcattgttacatgttcttagtcaaaaatcgggttttcgagctacttgatcggattgctctgaaactt-cccaaaaaatcagaa 49397311  T
Q  309 aatattc 315  Q
    || ||||    
T  49397312 aaaattc 49397318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 95 - 306
Target Start/End: Complemental strand, 14474291 - 14474081
Alignment:
Q  95 ttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatta 194  Q
    ||||||||||||||||| |||  ||||||||||| ||| ||||||| |||||||| | ||||||||||||||||| || ||| ||| | | | |||||||    
T  14474291 ttttcaagggaaaaacagttcatattatataatctgaattgtatcaacacaaattttgaacatgtttgtaacatggatagtcgtttaa-gaacaatatta 14474193  T
Q  195 atcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttcc 294  Q
    ||||||||||| ||||||||||| |||| |||||||||||| |||||||  |||||||||  ||||||||| ||||||||| ||||  ||||||||||      
T  14474192 atcttcctaaccctcatccttctattttaggtcattgttacctgttcttgatcaaaaatcctgttttcaagctacttgatcggattgctccgaaactttt 14474093  T
Q  295 ccagaaaatcag 306  Q
     |||||||||||    
T  14474092 tcagaaaatcag 14474081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 315
Target Start/End: Complemental strand, 6228875 - 6228673
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||||||||||||||||||||| | ||||| ||||| || || |||||||| || | ||||||| ||| ||||||||||||||||||||| |||    
T  6228875 ttcggattatataatccgaactgtatcaactcaaatcctaaagatattagtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 6228776  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||| ||||||||||||||||||| |||||||| ||||||||  |||||||  | || |||||| ||||  ||  ||||||||| | |||||||||||| |    
T  6228775 cttttgttttgggtcattgttacctgttcttagtcaaaaattgggttttcgggctatttgatcggattgctctaaaacttcccaaaaaaatcagaaaaaa 6228676  T
Q  313 ttc 315  Q
    |||    
T  6228675 ttc 6228673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 188 - 315
Target Start/End: Complemental strand, 54631479 - 54631352
Alignment:
Q  188 aatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccga 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||    ||||||||| ||||  ||| |    
T  54631479 aatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctccaa 54631380  T
Q  288 aacttccccagaaaatcagaaaatattc 315  Q
    ||||||||||||||||||||||| ||||    
T  54631379 aacttccccagaaaatcagaaaaaattc 54631352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 138 - 315
Target Start/End: Original strand, 52089315 - 52089492
Alignment:
Q  138 tcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacat 237  Q
    |||||||||||  ||||||||||||||||||| || ||||||||  ||| ||||||||| ||||||||| |||| |||||| |||||||||||||||| |    
T  52089315 tcagcacaaatcttaaacatgtttgtaacatggatagtcatttttgggacaatattaattttcctaactttcattcttctggtttgggtcattgttacct 52089414  T
Q  238 gttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||| ||||||||| ||||||     ||||||||| ||||  | | |||||||||||||||||||||||| ||||    
T  52089415 gttcttagtcaaaaatcgggtttttggactacttgatcggattgcttcaaaacttccccagaaaatcagaaaaaattc 52089492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 93 - 308
Target Start/End: Original strand, 37222046 - 37222260
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||||||||||| |||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||| ||   || |||| |||  ||||    
T  37222046 ctttttcaagggaaaaacagttcggattatataatttgaattgtatcagcataaattctaaacatgtttgtaacatggataaccactttaaggaccatat 37222145  T
Q  193 taa-tcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaact 291  Q
    ||| ||||| ||| ||||||| |||||||||||||||||||||  |||||||| | ||||||  |||| ||  | ||| ||||||||||  |||||||||    
T  37222146 taattcttcttaa-tctcatcattctgttttgggtcattgttagttgttcttagtaaaaaattcggttctcggggtac-tgatcagattgctccgaaact 37222243  T
Q  292 tccccagaaaatcagaa 308  Q
    |   |||||||||||||    
T  37222244 tttacagaaaatcagaa 37222260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 117 - 252
Target Start/End: Original strand, 27879657 - 27879792
Alignment:
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||||||| ||||||||| |||  |||||||| ||||||||||||||  ||     
T  27879657 gattatataatctgaactgtatcagcacaaattctgaacatgcttgtaacatgaatggtcattttaaggaccatattaatattcctaactctcataattt 27879756  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaa 252  Q
    |||||| | |||||||||  ||||| || |||||||    
T  27879757 tgttttagatcattgttagttgttcctagtcaaaaa 27879792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 308
Target Start/End: Original strand, 47456781 - 47456900
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 288  Q
    |||||||||||||||| |||||||||| |||||| ||||||||||| || |||||| ||||||||  |||||||  | ||||||||||||||  ||||||    
T  47456781 atattaatcttcctaaatctcatccttatgttttaggtcattgttagatattcttagtcaaaaattcggttttcgggctacttgatcagattgctccgaa 47456880  T
Q  289 acttccccagaaaatcagaa 308  Q
    ||||||||||||||||||||    
T  47456881 acttccccagaaaatcagaa 47456900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 47784101 - 47784214
Alignment:
Q  121 atataatccgaactgtatcagcacaaattctaaaca-tgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgt 219  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| ||| || ||||||||| ||| |||||||||| ||||||||||||| | |||||    
T  47784101 atataatccgaactatatcagcacaaattctaaacattgtttgtaatatggatagtcattttaaggacaatattaatc-tcctaactctcattcatctgt 47784199  T
Q  220 tttgggtcattgtta 234  Q
    |||| ||||||||||    
T  47784200 tttgagtcattgtta 47784214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 49002916 - 49002822
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactc 207  Q
    |||| |||||||| ||| |||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  49002916 ttcgaattatatattccaaactatatcagcacaaattctaaatatgtttgtaacataaatagtcattttatggaaaatattaatcttcctaactc 49002822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 29822629 - 29822773
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||    ||| ||  |||| ||||| ||||| ||||| || | ||| |||||| || || |||||||| |||| || ||||    
T  29822629 aatccggaaacttcaaaaaatacagcgcgttacatgatgttttcggattacataatccggaaaccccataaacaccctctttcaaggtaaaa-caattcg 29822727  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttg 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29822728 gattatataatccgaactgtatcagcacaaattctaaacatgtttg 29822773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 38416913 - 38416987
Alignment:
Q  94 tttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacat 168  Q
    |||||||||||||||||| |||  ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  38416913 tttttcaagggaaaaacagttcaaattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacat 38416987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 315
Target Start/End: Original strand, 29822775 - 29822887
Alignment:
Q  203 aactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 302  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||||| ||||  ||  |||||| |||||| ||    
T  29822775 aactctcatccttctgttttgggtcattgttacatgttcttaatcaaaaattggattttcgggctacttgatcggattgctcaaaaacttgcccagacaa 29822874  T
Q  303 tcagaaaatattc 315  Q
    |||||||| ||||    
T  29822875 tcagaaaaaattc 29822887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 47873953 - 47874037
Alignment:
Q  151 taaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttac 235  Q
    ||||||||||| ||||||| || ||||||||| ||| ||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  47873953 taaacatgtttataacatggatagtcattttagggacaatattaatcttcttaattctcatccttctgttttggatcattgttac 47874037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 280
Target Start/End: Original strand, 1788080 - 1788269
Alignment:
Q  94 tttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatt 193  Q
    ||||||||| |||||| | ||| ||||||||||||| ||||||||||||||  ||| | |  |||||  ||||||||||   || ||||  ||  |||||    
T  1788080 tttttcaagagaaaaatagttcagattatataatccaaactgtatcagcacggattatgagtatgttgttaacatgaataaccagtttaatgatcatatt 1788179  T
Q  194 aatcttcctaactctcatccttctgttttgggtcattgttacatgttcttact---caaaaatcaggttttcaagatacttgatcagatt 280  Q
    ||||||| |||||||||| |||||||||| |||||||||||| |||||||| |    |||||||  ||||||  ||||||||||||||||    
T  1788180 aatcttcataactctcattcttctgttttaggtcattgttacttgttcttagtaaaaaaaaatctagttttcgggatacttgatcagatt 1788269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 215
Target Start/End: Complemental strand, 25140777 - 25140675
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||  |||||||||| | |||||||| |||||| ||||||||||||||||| || ||||||||  ||| |||||||||||||||| || |||||    
T  25140777 ttcggattacgtaatccgaacagcatcagcaccaattctgaacatgtttgtaacatggatagtcattttgaggacaatattaatcttcctagctttcatc 25140678  T
Q  213 ctt 215  Q
    |||    
T  25140677 ctt 25140675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 254
Target Start/End: Original strand, 372024 - 372167
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatct--tcctaactctca 210  Q
    |||||||||||| |||  ||||||||||||||||||| | | ||||||| ||||||| || |||||||||  ||  |||||||| |  || ||| | |||    
T  372024 ttcggattatatcatctcaactgtatcagcacaaattatgagcatgtttataacatggatagtcattttaaagaccatattaatattctcataattttca 372123  T
Q  211 tccttctgttttgggtcattgttacatgttcttactcaaaaatc 254  Q
    ||||||||||||||||||||||||  | |||||| |||||||||    
T  372124 tccttctgttttgggtcattgttagttcttcttagtcaaaaatc 372167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 169
Target Start/End: Original strand, 23523916 - 23524068
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||| ||| ||  |||| ||| | ||||| ||||| |  | ||| | |||| || ||||||  | || |||| | ||||    
T  23523916 aatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccagaaaccccctaaacaccctttttttaaggtaaaataattcg 23524015  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatg 169  Q
    |||||||||||||  ||||||||||||||||| |||||||| |||||||||||    
T  23524016 gattatataatccacactgtatcagcacaaatcctaaacatatttgtaacatg 23524068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 25140544 - 25140466
Alignment:
Q  137 atcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 215  Q
    |||| ||| |||||| ||||||||||||||||| ||  |||||||| | | ||||||||||||||||||||||||||||    
T  25140544 atcaacaccaattctgaacatgtttgtaacatgtataatcattttaagaacaatattaatcttcctaactctcatcctt 25140466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 42497938 - 42497817
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||||||||| ||| |||||||||||||||| | | | |||||||||| |  || |  | |||| |||  ||||||||||| ||||||||||||    
T  42497938 ttcggattatataatctgaattgtatcagcacaaattatgagcttgtttgtaacttatatagctagtttaaggaccatattaatctttctaactctcatc 42497839  T
Q  213 cttctgttttgggtcattgtta 234  Q
     || |||||| |||||||||||    
T  42497838 attttgttttaggtcattgtta 42497817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 32600927 - 32601054
Alignment:
Q  94 tttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatt 193  Q
    |||||||||| ||||||| ||| |||||||| ||  ||| |||||||||||||||||| |||||| ||||||||||    ||||||||| |||  |||||    
T  32600927 tttttcaagg-aaaaacagttcagattatatgatatgaattgtatcagcacaaattctgaacatgcttgtaacatggccagtcattttaaggaccatatt 32601025  T
Q  194 aatcttcctaactctcatccttctgtttt 222  Q
    ||| |||||| ||| |||  |||||||||    
T  32601026 aatattcctacctcgcataattctgtttt 32601054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 18487824 - 18487690
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgatttttt--ctgattatataattcgaacacctcataaatactctttttcaagggaaaaacactt 114  Q
    |||| |||||| ||||||||||||| ||| || ||| ||||||  ||||||||| ||| |||||||    |||| ||||||||||| |  ||||||| ||    
T  18487824 aatcagaaaacctcaaaaaataggacgcgttacttgcttttttttctgattatagaatccgaacactcgctaaacactctttttcaggtaaaaaacaatt 18487725  T
Q  115 cggattatataatccgaactgtatcagcacaaatt 149  Q
    | |||||||||||| ||| ||||||| ||||||||    
T  18487724 cagattatataatctgaattgtatcatcacaaatt 18487690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 25140944 - 25140875
Alignment:
Q  153 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    ||||||||||||||||| || ||||||||| ||| |||||||||||||||| || | |||||| ||||||    
T  25140944 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctagctttgatccttgtgtttt 25140875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 234
Target Start/End: Complemental strand, 346276 - 346107
Alignment:
Q  63 attatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttg 162  Q
    ||||||||||||||||||| | |||| ||  || |||||||||||| || ||| ||||||| |||| ||||||||||| ||||||||    || | ||||    
T  346276 attatataattcgaacaccccttaaacaccattattcaagggaaaa-cagttcagattatagaatctgaactgtatcaacacaaatt-acgacttatttg 346179  T
Q  163 taacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    ||||||| || | || |||| ||   ||||||||||||||||||  || |||||| |||| |||| ||||||    
T  346178 taacatggataggcaatttaagggtcatattaatcttcctaacttccacccttctattttaggtcgttgtta 346107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 7863323 - 7863366
Alignment:
Q  94 tttttcaagggaaaaacacttcggattatataatccgaactgta 137  Q
    |||||||||||||||||| |||||||||||||||| ||||||||    
T  7863323 tttttcaagggaaaaacagttcggattatataatctgaactgta 7863366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 27181544 - 27181474
Alignment:
Q  151 taaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    ||||||||||||||||||| || |||||||||   | |||||||||| ||||||||||||||||| ||||||    
T  27181544 taaacatgtttgtaacatggatagtcattttaaaaataatattaatc-tcctaactctcatccttgtgtttt 27181474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 48095853 - 48095738
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 288  Q
    |||||||||||||||| | ||||| | ||||||| |||||||||||  | || ||| ||||||||| |||||||  | ||||| |||| |||  | ||||    
T  48095853 atattaatcttcctaattttcatcatcctgttttaggtcattgttagttatttttagtcaaaaatctggttttcgggctactttatcatattgcttcgaa 48095754  T
Q  289 acttccccagaaaatc 304  Q
    ||||||||| ||||||    
T  48095753 acttccccataaaatc 48095738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 234
Target Start/End: Complemental strand, 37770139 - 37770001
Alignment:
Q  97 ttcaagggaaaaacacttcggattatataatccgaa-ctgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaa 195  Q
    |||||||||||| || ||| |||||||||||  ||| | |||||| || ||||| | |  ||||||||||||||||| |||| ||||  ||  |||||||    
T  37770139 ttcaagggaaaagcaattcagattatataatttgaaacggtatcaacataaattttgagtatgtttgtaacatgaatagtcaatttaatgaccatattaa 37770040  T
Q  196 tcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    ||| |||||||||| ||||| | ||||  ||||||||||    
T  37770039 tctccctaactctcgtccttttattttaagtcattgtta 37770001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 49001521 - 49001427
Alignment:
Q  214 ttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 308  Q
    |||| ||||||||||||||||  ||||| || ||||||||| | |||||  | ||||||||| ||||  ||||||| ||| ||||||||||||||    
T  49001521 ttctattttgggtcattgttaactgttcatagtcaaaaatctgattttcgggctacttgatcggattgctccgaaaattctccagaaaatcagaa 49001427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 54631531 - 54631485
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattcta 152  Q
    |||||| ||||||||||| |||| |||||||||||||||||||||||    
T  54631531 aaaacagttcggattatacaatctgaactgtatcagcacaaattcta 54631485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 46381154 - 46381081
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 262  Q
    |||||||||||| |||||||||| |||| ||||| | |||||||||  | |||||| ||||||||| |||||||    
T  46381154 atattaatcttcataactctcattcttcagttttagatcattgttagttattcttagtcaaaaatctggttttc 46381081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 48629542 - 48629501
Alignment:
Q  193 taatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  48629542 taatcttcctaactcacatccttctgttttaggtcattgtta 48629501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 151
Target Start/End: Complemental strand, 46381239 - 46381202
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattct 151  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  46381239 ttcggattatataatccga-ctgtatcagcacaaattct 46381202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 234
Target Start/End: Complemental strand, 55433778 - 55433648
Alignment:
Q  104 gaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttccta 203  Q
    |||||||| || | ||||||||||| ||||||||||||||||||| |||    |||||| ||||||  ||  || |||| |||  ||| ||||| |||||    
T  55433778 gaaaaacagtttgaattatataatctgaactgtatcagcacaaatactaggtttgtttgcaacatgggttaccagtttaaggaccatactaatcatccta 55433679  T
Q  204 actctcatccttctgttttgggtcattgtta 234  Q
    || | |||| || ||| ||||||||||||||    
T  55433678 acccacatctttgtgtattgggtcattgtta 55433648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 148
Target Start/End: Original strand, 3425647 - 3425680
Alignment:
Q  115 cggattatataatccgaactgtatcagcacaaat 148  Q
    ||||||||||||||||||||| ||||||||||||    
T  3425647 cggattatataatccgaactgcatcagcacaaat 3425680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 20078729 - 20078774
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    |||||||| |||||| ||| |||||||||||||| |||||||||||    
T  20078729 atattaatattcctagctcgcatccttctgttttaggtcattgtta 20078774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 42660411 - 42660338
Alignment:
Q  139 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||| |||||| | ||||||||||| ||  || ||||||||| ||| |||||||||||||||| || |||||    
T  42660411 cagcaccaattctgagcatgtttgtaatattgatagtcattttaaggacaatattaatcttcctagctttcatc 42660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 51011455 - 51011391
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttga--ttttttctgattatataattcgaaca 79  Q
    ||||| |||| |||||||||||||| |||||| || |  ||||||||||||||||||| ||||||    
T  51011455 aatccaaaaatttcaaaaaataggacgcgctactttattttttttctgattatataatccgaaca 51011391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 53836280 - 53836211
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcatttta 182  Q
    ||||||||||||||||||||||||||||  | ||||| | ||| | |||| |||||| || |||||||||    
T  53836280 ttcggattatataatccgaactgtatcaatataaattatgaacctatttgcaacatggatagtcatttta 53836211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 55838978 - 55838933
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    |||||||||| ||||||||| |||||| |||||| |||||||||||    
T  55838978 atattaatctccctaactctaatccttatgttttaggtcattgtta 55838933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 13993341 - 13993301
Alignment:
Q  105 aaaaacacttcggattatataatccgaactgtatcagcaca 145  Q
    ||||||| |||||||||||||||||||| | ||||||||||    
T  13993341 aaaaacatttcggattatataatccgaaatatatcagcaca 13993301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 2e-77; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 3902963 - 3902666
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||||||||||||||||||||   ||| ||  |||| ||||  ||||| ||||| || | ||| | |||| || ||||||||||| |||| || ||||    
T  3902963 aatccgaaaacttcaaaaaatagagcgcgttacatgatgtttttggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa-cagttcg 3902865  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||| ||||||||||||| |||||||||||||||    
T  3902864 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatgatcattttatggacaatattaatcttcataactctcatccttc 3902765  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    || ||||||||||||||||||||||||| ||||||||| ||||||||   ||||||||| ||||  || ||||||| ||||||||||||||||| ||||    
T  3902764 tgctttgggtcattgttacatgttcttagtcaaaaatcgggttttcagattacttgatcggattgctcggaaacttgcccagaaaatcagaaaaaattc 3902666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 17 - 310
Target Start/End: Original strand, 50716254 - 50716547
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||||||||||||||||  | | ||  |||| ||| | ||||| ||||| || | ||| | |||| || ||||||||||| |||| || ||||    
T  50716254 aatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaa-caattcg 50716352  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||    
T  50716353 gattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatcattc 50716452  T
Q  217 tg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
     | ||||||||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  ||||||||||||||||||||||||||||    
T  50716453 cgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaa 50716547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 50796593 - 50796300
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||||||||||||||||  | | ||  |||| ||| | ||||| ||||| || | ||| | |||| || ||||||||||| |||| || ||||    
T  50796593 aatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaa-caattcg 50796495  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||    
T  50796494 gattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatcattc 50796395  T
Q  217 tg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
     | ||||||||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  ||||||||||||||||||||||||||||    
T  50796394 cgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaa 50796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 24 - 315
Target Start/End: Complemental strand, 3352216 - 3351926
Alignment:
Q  24 aaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattata 123  Q
    |||||| |||||||||| |||| ||  |||| ||| | ||||| |||||||| | ||| | |||| || |||| |||||| |||| || |||| ||||||    
T  3352216 aaacttaaaaaaatagggtgcgttacatgatgtttccggattacataattcggaaaccccctaaacaccctttatcaaggtaaaa-cagttcgaattata 3352118  T
Q  124 taatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttg 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  3352117 taatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcattcttctgttttg 3352018  T
Q  224 ggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||||||||  ||||||| | ||||||  |||||||| | ||||||||| ||||  ||||||||||||| |||||||||||||| ||||    
T  3352017 ggtcattgttaccggttcttagtaaaaaatagggttttcaggctacttgatcggattgctccgaaacttccctagaaaatcagaaaaaattc 3351926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 34821500 - 34821203
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| ||||||||||||||||   ||| ||  |||| ||||| ||||| ||||| || | ||| | |||| ||  |||||||||| ||||  | ||||    
T  34821500 aatccggaaacttcaaaaaatagagcgcgttacatgatgttttcggattacataatccggaaaccccctaaacaccatttttcaaggtaaaat-agttcg 34821402  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||||||||||| | |||||||||    
T  34821401 gattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttatggacaatattaatcttcctaaatttcatccttc 34821302  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||||||||||||||| |||||||| | ||||| | |||||||| | ||||||||| |||   || ||||||||||||||||||||||||| ||||    
T  34821301 tgttttgggtcattgttacctgttcttagttaaaaagcgggttttcaggctacttgatcggatcgctctgaaacttccccagaaaatcagaaaaaattc 34821203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 38977905 - 38977608
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||| ||  || | ||||  ||||| ||||| |||| ||| | |||| ||  |||||||||| |||| || |||     
T  38977905 aatccggaaacttcaaaaaatagggcgcgttacatggtgttttgggattacataatccgaaaaccccctaaacaccttttttcaaggtaaaa-cagttca 38977807  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
     |||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||    
T  38977806 aattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttc 38977707  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||||||||||||||| ||| |||| | ||||| |  |||||| || ||||||||| ||||  ||| ||||||||||||||||| |||||| ||||    
T  38977706 tgttttgggtcattgttacctgtccttagttaaaaaccgagttttcgagctacttgatcggattgctccaaaacttccccagaaaataagaaaaaattc 38977608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 28 - 315
Target Start/End: Original strand, 51258415 - 51258703
Alignment:
Q  28 ttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataat 127  Q
    |||||||||||||  ||| ||  | |||||||| ||||| ||||| |||||||| | |||| ||  |||||||||||||||||| || | ||||||||||    
T  51258415 ttcaaaaaatagggcgcgttacataattttttcggattacataatccgaacaccccctaaacaccatttttcaagggaaaaacaatttgaattatataat 51258514  T
Q  128 ccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatgg-agaatattaatcttcctaactctcatccttctgttttgggt 226  Q
    |||||||||||||||||||||| ||||||||||| ||||||| || ||||||||| || | ||||||||||||| |||||||||||||| ||||||| ||    
T  51258515 ccgaactgtatcagcacaaattttaaacatgtttataacatggatagtcattttagggaacaatattaatcttcataactctcatccttttgttttgagt 51258614  T
Q  227 cattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||||||||||||| |||||||||  ||||||     |||||||| ||||  |||||||||| ||||||||||||||||| ||||    
T  51258615 cattgttacatgttcttagtcaaaaatcgagttttcggacaacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattc 51258703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 30721966 - 30721676
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatt---tgattttttctgattatataattcgaacac-ctcataaatactctttttcaagggaaaaacac 112  Q
    ||||||||||||||||||||||||  ||  ||||   |||||||||| ||||| ||||| ||||||| | | |||| ||  |||||||||||||||| |     
T  30721966 aatccgaaaacttcaaaaaatagggcgcaatattacatgattttttcggattacataatccgaacactcccctaaacaccatttttcaagggaaaaatag 30721867  T
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||      | |||||||| ||| ||||||||||||||||||||| |||    
T  30721866 ttcagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaac------tctcattttagggacaatattaatcttcctaactcttatc 30721773  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    ||||||||||||||||||| |||  ||| ||| ||||||||  ||||||| || ||||||||| ||||  |||||||||| |||||||||||||||||    
T  30721772 cttctgttttgggtcattgatacccgttattagtcaaaaattgggttttcgagctacttgatcggattgctccgaaactt-cccagaaaatcagaaaa 30721676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 106 - 315
Target Start/End: Original strand, 52777321 - 52777530
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || | ||||||| ||| ||||||||||||| ||||    
T  52777321 aaaacagttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaacatgtatagccattttagggacaatattaatcttcttaac 52777420  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    ||| |||||| ||||||||||||||| |||||||||||| ||||||||| |||||||  | ||||||||| ||||  || |||||||||||| |||||||    
T  52777421 tcttatccttttgttttgggtcattgctacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaatca 52777520  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  52777521 gaaaaaattc 52777530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 106 - 315
Target Start/End: Original strand, 28873095 - 28873305
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||| ||| ||||||||||||| ||||    
T  28873095 aaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttagggacaatattaatcttcttaac 28873194  T
Q  206 tctcatccttctg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatc 304  Q
    |||||| |||| | |||||||||| |||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  |||||||||||||||||||||     
T  28873195 tctcattcttccgcttttgggtcactgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatt 28873294  T
Q  305 agaaaatattc 315  Q
    |||||| ||||    
T  28873295 agaaaaaattc 28873305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 117 - 280
Target Start/End: Complemental strand, 501199 - 501036
Alignment:
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||| || ||||||||||||| |||||||||||||||| ||||||||||||    
T  501199 gattatataatccgaactgtataagcacaaattctaaacatgtttgtaaaatggatagtcattttatggacaatattaatcttcctagctctcatccttc 501100  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagatt 280  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||  | ||||||||| ||||    
T  501099 tgttttgggtcattgttacatgtttttattcaaaaatcatgttttcgggctacttgatcggatt 501036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 106 - 315
Target Start/End: Original strand, 35142164 - 35142372
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| |||||||||||||||  ||| |||||||||||||||||||||||||||||||||||| || |||||||||  || ||||||||||||||||||    
T  35142164 aaaacagttcggattatataatatgaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaac 35142263  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    ||||||||||||| |||||||||||||||  |||||||| |||||||   |||||||  | ||||||||| ||||  |||||||||| ||||||||||||    
T  35142264 tctcatccttctgctttgggtcattgttatctgttcttagtcaaaaactgggttttcgggctacttgatcggattgctccgaaactt-cccagaaaatca 35142362  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  35142363 gaaaaaattc 35142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 106 - 315
Target Start/End: Original strand, 39149899 - 39150108
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||   | |||||||||  || ||||||||| ||||||||    
T  39149899 aaaacagttcgggttatataatccgaactctatcagcacaaattttaaacatgtttgtaacattggtagtcattttagagacaatattaattttcctaac 39149998  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||||| | |||||||  | |||||| ||  |||  |||||||||||||||||||||||    
T  39149999 tctcatccttctgttttgggtcactgttacatgttcttagttaaaaaccgggttttcgggctacttggtcgaattgctccgaaacttccccagaaaatca 39150098  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  39150099 gaaaaaattc 39150108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 126 - 310
Target Start/End: Original strand, 47123136 - 47123320
Alignment:
Q  126 atccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttggg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  47123136 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47123235  T
Q  226 tcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
     ||||||||| |||||||| | ||||| |   |||||  | ||||||||| ||||  |||||||||| |||||||||||||||||    
T  47123236 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctccgaaacttgcccagaaaatcagaaaa 47123320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 113 - 315
Target Start/End: Complemental strand, 43473031 - 43472828
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||||| |||    
T  43473031 ttcgaattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatattaatcttcctaactcttatc 43472932  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttcccc-agaaaatcagaaaat 311  Q
    ||| ||||||||||||||||||  |||||||| ||||||||| |||||||  | ||||||||| ||||  || ||||||||||| | ||||||||||||     
T  43472931 cttttgttttgggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggattactctgaaacttccccaaaaaaatcagaaaaa 43472832  T
Q  312 attc 315  Q
    ||||    
T  43472831 attc 43472828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 113 - 315
Target Start/End: Complemental strand, 2358684 - 2358482
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||||| |||    
T  2358684 ttcggattatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 2358585  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||| ||||||||||||||||| ||| |||||| ||||||||| ||||||   | |||||||||  |||  || |||||||||||| |||||||||||| |    
T  2358584 cttttgttttgggtcattgttgcatattcttagtcaaaaatcgggtttttgggctacttgatcgaattgctctgaaacttccccaaaaaatcagaaaaaa 2358485  T
Q  313 ttc 315  Q
    |||    
T  2358484 ttc 2358482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 51540771 - 51540527
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||| ||  |||| ||| |  |||| ||||| || | ||| | |||| ||  |||||||||| |||| || ||||    
T  51540771 aatccggaaacttcaaaaaatagggcgcgttacatgatgtttccgaattacataatccggaaaccccttaaacaccgtttttcaaggtaaaa-cagttcg 51540673  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||| || || ||||||||| ||| |||||||||||||||||||||||||||||    
T  51540672 gattatataatctgaatagtatcagcacaaattctaaacatgtttgtaacttggatagtcattttagggacaatattaatcttcctaactctcatccttc 51540573  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 262  Q
    |  ||||||||||||||||| ||||||| ||||||||| |||||||    
T  51540572 tcctttgggtcattgttacacgttcttagtcaaaaatcgggttttc 51540527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 126 - 310
Target Start/End: Original strand, 47130502 - 47130686
Alignment:
Q  126 atccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttggg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| |   |||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  47130502 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47130601  T
Q  226 tcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
     ||||||||| |||||||| | ||||| |   |||||  | ||||||||| ||||  |||||||||| |||||||||||||||||    
T  47130602 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctccgaaacttgcccagaaaatcagaaaa 47130686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 51 - 310
Target Start/End: Complemental strand, 49096350 - 49096091
Alignment:
Q  51 tgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattc 150  Q
    ||||||||||  |||| ||||| | |||||| | |||| |  ||||||||||| ||||||| || | ||||||||||| ||||||||||||||||||||     
T  49096350 tgattttttcgaattacataatccaaacaccccctaaacagcctttttcaagg-aaaaacagtttgaattatataatctgaactgtatcagcacaaattt 49096252  T
Q  151 taaacatgtttgtaacatgaattgtcattttatggag-aatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaa 249  Q
    ||||||||||||||||||  || ||||||||| |||  ||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||  ||||    
T  49096251 taaacatgtttgtaacatagatagtcattttagggaacaatataaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttcgtcaa 49096152  T
Q  250 aaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    |||||  ||||||  | ||||||||| ||||  ||| |||||||||| |||| ||||||||    
T  49096151 aaatcgagttttcgggctacttgatcggattgctccaaaacttcccccgaaagtcagaaaa 49096091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 47302021 - 47302318
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||| |||||||| |  ||| ||  |||| ||| | ||||| ||||| |||| ||||| |||| || ||||||  | || |||| | ||||    
T  47302021 aatccggaaacttaaaaaaataaggcgcgttacatgatgtttccggattacataatccgaaaacctcctaaacaccctttttttaaggtaaaatagttcg 47302120  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||| || | ||||||| ||| ||||||||| || |||||||| ||||||     
T  47302121 gattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttta-ggacaatattaatatt-ctaactcttatccttt 47302218  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaac-ttccccagaaaatcagaaaatattc 315  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||  | ||||||||| |||| ||| ||||| ||||| | |||||||||||| ||||    
T  47302219 tgttttgggtcattgttacatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgttctgaaactttcccaaaaaaatcagaaaaaattc 47302318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 94 - 303
Target Start/End: Original strand, 51492877 - 51493087
Alignment:
Q  94 tttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatt 193  Q
    |||| ||| ||| ||||| |||||||| ||||||||||||||||  |||||||||||||| ||||||||||| |||||| || |||||||||| ||||||    
T  51492877 ttttccaacggagaaacagttcggattttataatccgaactgtactagcacaaattctaatcatgtttgtaatatgaatagttattttatggacaatatt 51492976  T
Q  194 aatcttcctaactctcatccttctgttttgggtcattgttacatgttcttact-caaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    |||||||||||||||||||||| |||||| |||||||||||  |||||||| |  ||||||  ||||||     ||||||||||||||  ||||||||||    
T  51492977 aatcttcctaactctcatccttatgtttttggtcattgttagctgttcttagtaaaaaaattgggtttttggcctacttgatcagattgctccgaaactt 51493076  T
Q  293 ccccagaaaat 303  Q
    |||||||||||    
T  51493077 ccccagaaaat 51493087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 106 - 226
Target Start/End: Original strand, 33438611 - 33438731
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| || ||||||||| ||| ||||||||||||||||||    
T  33438611 aaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaac 33438710  T
Q  206 tctcatccttctgttttgggt 226  Q
    |||||||||||||||||||||    
T  33438711 tctcatccttctgttttgggt 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 106 - 315
Target Start/End: Complemental strand, 46622853 - 46622655
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||            || ||||||||| ||| ||||||||||||||| ||    
T  46622853 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgg-----------atagtcattttagggacaatattaatcttccttac 46622765  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||||||| | |||||    ||||||||| ||||  |||||||||| ||||||||||||    
T  46622764 tctcattcttctgttttgggtcattgttacttgttcttagtcaaaaatcggattttcggactacttgatcggattgctccgaaactttcccagaaaatca 46622665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 117 - 315
Target Start/End: Complemental strand, 47739990 - 47739793
Alignment:
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||| | ||| ||||||||||||| |||||||||||||||    
T  47739990 gattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcatttaagggacaatattaatcttcataactctcatccttc 47739891  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||| ||||||| |||| || | ||| | ||||||  |||||||  | ||||||||| ||||  ||| ||||||||||||||||| |||||| ||||    
T  47739890 tgtttt-ggtcattattacctggttttagttaaaaattgggttttcgggctacttgatcggattgctccaaaacttccccagaaaattagaaaaaattc 47739793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 62 - 262
Target Start/End: Complemental strand, 5128011 - 5127812
Alignment:
Q  62 gattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgttt 161  Q
    ||||||||||| |||||||||| |||| |||  ||||||||||||||||| ||| | |||||||||| ||| |||||||||| ||||| |||||||||||    
T  5128011 gattatataatccgaacacctc-taaacacttattttcaagggaaaaacagttcagtttatataatctgaattgtatcagcataaattttaaacatgttt 5127913  T
Q  162 gtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggtttt 261  Q
    |||||||| ||   ||||||||||| ||||||||||||| || ||||||||| | ||||||| ||||||||||  |||||||  ||||||||| ||||||    
T  5127912 gtaacatggatatccattttatggacaatattaatcttcatagctctcatccatttgttttgcgtcattgttagttgttcttggtcaaaaatctggtttt 5127813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 54 - 280
Target Start/End: Original strand, 29048381 - 29048607
Alignment:
Q  54 ttttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaa 153  Q
    ||||||| ||||||| ||| |||||||| | |||| |  ||||||||||||||||||| ||| |||||||||||| ||||| ||||| |||||||||| |    
T  29048381 ttttttcggattatagaatccgaacaccccctaaacatcctttttcaagggaaaaacaattcagattatataatcggaactatatcaacacaaattctga 29048480  T
Q  154 acatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttact-caaaaa 252  Q
    | |||||||||||||| |  || |||||| ||| ||||||||||||| ||||||| |||||| |||||| |||||||||||  |||||||| |  |||||    
T  29048481 atatgtttgtaacatg-acagttattttaaggataatattaatcttcataactcttatccttatgttttaggtcattgttaactgttcttagtataaaaa 29048579  T
Q  253 tcaggttttcaagatacttgatcagatt 280  Q
    || |||||||| | ||||||||| ||||    
T  29048580 tctggttttcaggctacttgatcggatt 29048607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 153 - 308
Target Start/End: Complemental strand, 35345931 - 35345776
Alignment:
Q  153 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaa 252  Q
    ||||||||||||||||| || ||||||||||||| ||||||||| || ||||||||||||||| ||||||  ||||||||||  |||||||| |||||||    
T  35345931 aacatgtttgtaacatggatagtcattttatggacaatattaatatttctaactctcatccttttgtttttcgtcattgttagttgttcttagtcaaaaa 35345832  T
Q  253 tcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 308  Q
    |  |||||||  | || |||||| ||||  ||||||||||||||||||||||||||    
T  35345831 ttgggttttcgggttaattgatcggattgctccgaaacttccccagaaaatcagaa 35345776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 191 - 315
Target Start/End: Original strand, 3938357 - 3938481
Alignment:
Q  191 attaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaac 290  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  || |||||    
T  3938357 attaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatctggttttcgggttacttgatcggattgctctgaaac 3938456  T
Q  291 ttccccagaaaatcagaaaatattc 315  Q
    ||||||| |||||||||||| ||||    
T  3938457 ttccccaaaaaatcagaaaaaattc 3938481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 54 - 206
Target Start/End: Complemental strand, 45712205 - 45712053
Alignment:
Q  54 ttttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaa 153  Q
    ||||||| ||||||| ||| | |||| ||| |||| || ||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| | |    
T  45712205 ttttttcggattatagaatccaaacatctcctaaaaacccttattcaagggaaaaacagttcggattatataatctgaactgtatcagcacaaattatga 45712106  T
Q  154 acatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaact 206  Q
     ||||||||||||||| ||  ||||||||  ||  ||||||||||||||||||    
T  45712105 tcatgtttgtaacatggataatcattttaaagaccatattaatcttcctaact 45712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 151 - 254
Target Start/End: Original strand, 46624855 - 46624958
Alignment:
Q  151 taaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaa 250  Q
    |||| |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  |||| ||| |||||    
T  46624855 taaatatgtttgtaacatgtatagtcattttatggaaaatattaatcttcctaactctcatccttctgttttgggtcattattagttgttattagtcaaa 46624954  T
Q  251 aatc 254  Q
    ||||    
T  46624955 aatc 46624958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 27143497 - 27143357
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| ||||||| |||  ||||||||||| || ||||||||||||||||||| ||||||||||||||||| || || |||||| ||| |||||    
T  27143497 ctttttcaagg-aaaaacagttcaaattatataatctgatctgtatcagcacaaattctgaacatgtttgtaacatggatagttattttaaggataatat 27143399  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    |||  ||||||||  |||||||||| |||||| |||||||||    
T  27143398 taagattcctaaccatcatccttctattttggatcattgtta 27143357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 29035885 - 29036017
Alignment:
Q  103 ggaaaaacacttcggattatataatccgaactgt-atcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcc 201  Q
    ||||||||| |||| ||||||||||| ||||||| |||| |||||||||||| ||||||||||||||| ||  |||||||| |||  |||||| ||||||    
T  29035885 ggaaaaacagttcgaattatataatctgaactgttatcaacacaaattctaagcatgtttgtaacatggataatcattttaaggaccatattactcttcc 29035984  T
Q  202 taactctcatccttctgttttgggtcattgtta 234  Q
    ||||||||||| || |||||| |||||||||||    
T  29035985 taactctcatcattatgttttaggtcattgtta 29036017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 93 - 308
Target Start/End: Complemental strand, 54229979 - 54229764
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||  || |||||| ||||||||||||||| | |||||||||| |||||||||| |   ||||||||||||||||   || |||| |||  ||||    
T  54229979 ctttttcagaggcaaaacagttcggattatataattcaaactgtatcaacacaaattctgagtctgtttgtaacatgaatatccagtttaaggaccatat 54229880  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    |||||||||| |||| |||| || |||| | |||||||||||  |||| ||| ||||||||  |||||||  | ||||||||||||||  || |||||||    
T  54229879 taatcttccttactcgcatcattatgttctaggtcattgttagttgttattagtcaaaaattcggttttcttgctacttgatcagattgctctgaaactt 54229780  T
Q  293 ccccagaaaatcagaa 308  Q
    ||||| ||||| ||||    
T  54229779 ccccaaaaaataagaa 54229764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 113 - 306
Target Start/End: Original strand, 40062476 - 40062669
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||||||||||||||| |||||||||||||| | |   ||||||||||||| ||    | ||||  ||  ||||||||||||||||||||  ||    
T  40062476 ttcggattatataatccgaactatatcagcacaaattttgagtttgtttgtaacatggataactagtttaaagaccatattaatcttcctaactctggtc 40062575  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 306  Q
    ||| |||||| ||||||| |||  |||||||| ||||||||| |||||||  | ||||||||||||||   |||||| ||||| ||||||||||    
T  40062576 cttttgttttaggtcattattagttgttcttagtcaaaaatctggttttcgggctacttgatcagattgcaccgaaatttccctagaaaatcag 40062669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 3937476 - 3937563
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttc 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||   ||||||||||| |||||||||||||    
T  3937476 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttatggacaatattaatcttc 3937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 50 - 252
Target Start/End: Complemental strand, 14829042 - 14828842
Alignment:
Q  50 ttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaatt 149  Q
    ||||||||||  ||||||| ||| ||||||| ||  |||||  |||||| |||| ||||| | || ||||||||||||||||| | ||| | | ||||||    
T  14829042 ttgatttttttagattatagaatccgaacac-tcccaaatagccttttttaaggaaaaaa-agtttggattatataatccgaaatatattaacgcaaatt 14828945  T
Q  150 ctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaa 249  Q
    ||||| |||||| ||||||| ||  | |||||| ||| ||||||||||||| |||| ||||||| ||||||||||||| ||||||  |||||||| ||||    
T  14828944 ctaaatatgtttataacatggataataattttaaggataatattaatcttcataaccctcatccatctgttttgggtccttgttagttgttcttagtcaa 14828845  T
Q  250 aaa 252  Q
    |||    
T  14828844 aaa 14828842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 53 - 211
Target Start/End: Complemental strand, 47980128 - 47979970
Alignment:
Q  53 attttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattcta 152  Q
    |||||| | ||||||| |||  ||||||| | |||| ||| |||||||| ||||||||| |    |||||||||||||||||||||||||||||||| |     
T  47980128 atttttccggattatagaatctgaacaccccctaaacactttttttcaatggaaaaacagtcacaattatataatccgaactgtatcagcacaaattttg 47980029  T
Q  153 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcat 211  Q
    ||||| ||| ||||||  || ||||||||| ||| |||||||||||| |||||||||||    
T  47980028 aacatatttataacatagatagtcattttaaggacaatattaatctttctaactctcat 47979970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 47769359 - 47769480
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||||| |||| ||| ||||||||| |||||||| ||||||||||||||||| || ||||||||| | |  |||||||||||  ||||| |||||    
T  47769359 ttcggattatagaatctgaattgtatcagcgcaaattctgaacatgtttgtaacatggatagtcattttaagaatcatattaatctttttaactatcatc 47769458  T
Q  213 cttctgttttgggtcattgtta 234  Q
     |||| |||| |||||||||||    
T  47769459 attctattttaggtcattgtta 47769480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 29035798 - 29035885
Alignment:
Q  100 aagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggag 187  Q
    |||||||||||| ||||||||||||||| |||| ||||| |  ||||||||| ||||||||||||||||| || ||||||||| ||||    
T  29035798 aagggaaaaacagttcggattatataattcgaattgtatgaatacaaattctgaacatgtttgtaacatggatagtcattttaaggag 29035885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 26053579 - 26053485
Alignment:
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatgg-agaatattaatcttcctaactctca 210  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| |||| || || ||||||||| || | |||| |||||||||||| |||||    
T  26053579 gattatataatccaaactgtatcaacacaaattctaaacatgtttataacttggatagtcattttagggaacaatactaatcttcctaattctca 26053485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 234
Target Start/End: Complemental strand, 34010203 - 34010030
Alignment:
Q  62 gattatataattcgaacacctcataaatactctttttcaagggaaaaa-cacttcggattatataatccgaactgtatcagcacaaattctaaacatgtt 160  Q
    ||||||| |||||| |||||||||||| |  ||| |||| |||||||| || |||||||||||||||||||| ||||||| || ||||| | |   ||||    
T  34010203 gattatagaattcgtacacctcataaacatccttattcatgggaaaaaacaattcggattatataatccgaattgtatcaacataaattttgagtctgtt 34010104  T
Q  161 tgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    ||||||||| || |  | |||| |||  |||||||| || |||||||| |||||| |||||| | |||||||||    
T  34010103 tgtaacatggatagctagtttaaggatcatattaatttttctaactcttatccttttgttttagatcattgtta 34010030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 8735530 - 8735599
Alignment:
Q  153 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    ||||||||||||||||  || ||||||||| ||| ||||||||||||||||||| |||||||| ||||||    
T  8735530 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatccttgtgtttt 8735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 9087771 - 9087840
Alignment:
Q  153 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    ||||||||||||||||  || ||||||||| ||| ||||||||||||||||||| |||||||| ||||||    
T  9087771 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatccttgtgtttt 9087840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 33842136 - 33842027
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||| ||||||  || || |||  ||| |||| ||||||||||||||| ||| || ||||||||| ||| ||||||||| ||| |||||||||||    
T  33842136 ttcggattacataatctaaattgcatcgacaccaattttaaacatgtttgtaatatggatagtcattttaaggacaatattaatgttcgtaactctcatc 33842037  T
Q  213 cttctgtttt 222  Q
    ||| ||||||    
T  33842036 cttgtgtttt 33842027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 33439383 - 33439475
Alignment:
Q  218 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    |||||||||||||||||| | |||||| | ||||||||| |||||    ||||||||| ||||  |||||||||| |||||||||||||||||    
T  33439383 gttttgggtcattgttactttttcttagttaaaaatcagattttcggactacttgatcggattgctccgaaacttgcccagaaaatcagaaaa 33439475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 234
Target Start/End: Complemental strand, 43420243 - 43420071
Alignment:
Q  62 gattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgttt 161  Q
    ||||||| ||| | |||||| |||||| || ||| |||||| |||| ||| || ||||||||||||| ||| ||||||| |||||||| | |||| ||||    
T  43420243 gattatagaatccaaacaccccataaacacccttattcaagagaaatacaatttggattatataatcagaattgtatcaacacaaattatgaacacgttt 43420144  T
Q  162 gtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    |||||||| ||  |||||||| | |  ||||||| ||| | |||| ||||  || || ||| |||||||||||    
T  43420143 gtaacatggataatcattttaagaaccatattaaccttgccaactatcattattttggttttggtcattgtta 43420071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 254
Target Start/End: Complemental strand, 4300276 - 4300201
Alignment:
Q  179 tttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatc 254  Q
    |||| ||| ||||||||||||||||||| |||||||| ||| || ||||||||||| ||||||||| | |||||||    
T  4300276 tttaaggacaatattaatcttcctaactatcatccttttgtattaggtcattgttagatgttcttagtaaaaaatc 4300201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 46555445 - 46555554
Alignment:
Q  121 atataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtt 220  Q
    |||||||| ||| ||||| |||||||||| | |  |||||| ||||||  ||   ||||||| |||  |||||||||||| |||||||||||||||||||    
T  46555445 atataatctgaattgtataagcacaaattttgagtatgtttataacatagataaccattttaaggaccatattaatcttcataactctcatccttctgtt 46555544  T
Q  221 ttgggtcatt 230  Q
    || |||||||    
T  46555545 ttaggtcatt 46555554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 310
Target Start/End: Complemental strand, 50384545 - 50384340
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||| ||||||||||| ||||||||||| ||| ||||| | |   ||||||||||||  ||  ||| |||| |||  |||||||||||  ||||    
T  50384545 aaaacatttcagattatataatacgaactgtatctgcataaattatgagtttgtttgtaacatacataatcagtttaaggaacatattaatctttataac 50384446  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttact-caaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatc 304  Q
    ||| |||||||||||||  ||||||||||  | |||||| |  ||||||   ||||||     |||||||||||||  ||||||||||||||| ||||||    
T  50384445 tctaatccttctgttttatgtcattgttagttattcttagtaaaaaaatgcagttttcggtccacttgatcagattgctccgaaacttccccaaaaaatc 50384346  T
Q  305 agaaaa 310  Q
    | ||||    
T  50384345 ataaaa 50384340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 310
Target Start/End: Original strand, 51816387 - 51816508
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 288  Q
    |||||||||||| ||||| |||||||  |||||| |||||||||||  ||||| || || |||||   ||||||  | ||||||||||||||  ||||||    
T  51816387 atattaatcttcataactatcatcctcatgttttaggtcattgttagttgttcctagtcgaaaatatagttttctggttacttgatcagattgctccgaa 51816486  T
Q  289 acttccccagaaaatcagaaaa 310  Q
    | ||||||| ||||| ||||||    
T  51816487 atttccccaaaaaataagaaaa 51816508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 35346020 - 35345956
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacc 81  Q
    ||||||||| | | |||||||||| |||||||||||| |||||| |||||||||||| |||||||    
T  35346020 aatccgaaaccctaaaaaaatagggtgcgctatttgaatttttcagattatataatttgaacacc 35345956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 149
Target Start/End: Original strand, 11266306 - 11266401
Alignment:
Q  54 ttttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaatt 149  Q
    ||||||| ||||||| |||| ||||  | | |||| || ||||||||||| ||||||| |  | ||||||||||||||||||||||| ||||||||    
T  11266306 ttttttcggattatagaatttgaactgcccctaaacaccctttttcaaggaaaaaacagtctgcattatataatccgaactgtatcaacacaaatt 11266401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 26464913 - 26465044
Alignment:
Q  103 ggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcct 202  Q
    ||||||||| |||||||||||||||| |||||||||||  | ||||| |  |  ||||||||| ||| ||   || |||| | |  |||||||||||| |    
T  26464913 ggaaaaacaattcggattatataatctgaactgtatcaaaataaattttgtatctgtttgtaaaatggataaccagtttaagtacgatattaatcttctt 26465012  T
Q  203 aactctcatccttctgttttgggtcattgtta 234  Q
    ||||||||| ||| |||||| |||||||||||    
T  26465013 aactctcattcttatgttttaggtcattgtta 26465044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 40062344 - 40062241
Alignment:
Q  203 aactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 302  Q
    ||||||| ||||| |||| | ||||||| |||  |||||||| ||||||||| | |||||| | ||||||||||||||   |||||| ||||| ||||||    
T  40062344 aactctcgtccttttgttctaggtcattattagttgttcttaatcaaaaatccgattttcaggttacttgatcagattgcaccgaaatttccctagaaaa 40062245  T
Q  303 tcag 306  Q
    ||||    
T  40062244 tcag 40062241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 45244514 - 45244577
Alignment:
Q  140 agcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttccta 203  Q
    ||||| |||||| |||||||||||||||||  | ||||||||| ||| ||||||||||||||||    
T  45244514 agcaccaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttccta 45244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 512315 - 512214
Alignment:
Q  108 aacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactc 207  Q
    |||| |||||||||||| ||| ||| |||||||  ||||||| | ||||||||| ||||||| || |||||||||  ||  |||||||| ||| ||||||    
T  512315 aacaattcggattatatcatctgaattgtatcaatacaaattatgaacatgtttataacatggatagtcattttaaagaccatattaatattcataactc 512216  T
Q  208 tc 209  Q
    ||    
T  512215 tc 512214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 51816251 - 51816335
Alignment:
Q  22 gaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaa 106  Q
    |||||| ||||||||||||||||  || ||||||||||| ||||||| ||  ||||||||   |||| || ||||||||||||||    
T  51816251 gaaaacctcaaaaaataggatgcattacttgattttttcggattatagaacccgaacaccctctaaacaccctttttcaagggaa 51816335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 8735197 - 8735236
Alignment:
Q  29 tcaaaaaataggatgcgctatttgattttttctgattata 68  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  8735197 tcaaaaaatagggtgcgctatttgattttttcggattata 8735236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 9087438 - 9087477
Alignment:
Q  29 tcaaaaaataggatgcgctatttgattttttctgattata 68  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  9087438 tcaaaaaatagggtgcgctatttgattttttcggattata 9087477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 32025111 - 32025172
Alignment:
Q  139 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttc 200  Q
    |||||| |||||| ||||||||||||| || ||| ||| ||||| ||| |||||||||||||    
T  32025111 cagcaccaattctgaacatgtttgtaatataaatagtcgttttaaggacaatattaatcttc 32025172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 8e-77; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 17120037 - 17119744
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||||||||||||| ||  |||||||||||||||||| | |||||||||  ||||||| | |||| ||  |||||||  |||||| || ||||    
T  17120037 aatccgaaaacttcaaaaaattgggcgcgctatttgattttttcggtttatataatctgaacaccccttaaacaccatttttcattggaaaaccagttcg 17119938  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||    
T  17119937 gattatataatctgaattgtatcagcacaaattctaaatatgtttgtaacatggattgtcattttacggacaatattaatcttcctaactctcatccttc 17119838  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    |||||||| |||||||||| |||||||| ||||||| | |||||||    ||||||||  ||||  |||||||||||||||| |||| ||||||    
T  17119837 tgttttggatcattgttacctgttcttagtcaaaaaccgggttttcggactacttgattggatttctccgaaacttccccaggaaattagaaaa 17119744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 27928098 - 27927801
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||| ||  |||| ||| | ||||| |||||  | | ||| | |||| ||  |||||||||| |||| || ||||    
T  27928098 aatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcaggaaaccccctaaacaccatttttcaaggtaaaa-cagttcg 27928000  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||  || |||||||||||||||||||||||||||||    
T  27927999 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaactctcatccttc 27927900  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||||||||||||||| |||||||| | ||||||  |||||||    ||||||||||||||  ||||||||||||||| |||||||||||| ||||    
T  27927899 tgttttgggtcattgttacctgttcttagttaaaaattgggttttcggactacttgatcagattgctccgaaacttccccataaaatcagaaaaaattc 27927801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 44106225 - 44106510
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| || ||||||||||| |||| || ||||    
T  44106225 aatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa-cagttcg 44106323  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||  ||||| |||||||||||||||||||||||||||||    
T  44106324 gattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattccatggacaatattaatcttcctaactctcatccttc 44106423  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 303  Q
    ||||||| ||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  || |||||||||||| |||||    
T  44106424 tgttttgagtcattgttacctgttcttagtcaaaaatcgggttttcgtgctacttgatctgattgctctgaaacttccccataaaat 44106510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 8885610 - 8885318
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| || | ||||||||| |||| || ||||    
T  8885610 aatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccattttcaaggtaaaa-cagttcg 8885512  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||    
T  8885511 gattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 8885412  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    |||||||||| |||||||| |||||||| | ||||||| |||||||    ||||||||| ||||  |||||||| | |||||||||||||||||    
T  8885411 tgttttgggttattgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacattcccagaaaatcagaaaa 8885318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 107 - 315
Target Start/End: Original strand, 3094776 - 3094984
Alignment:
Q  107 aaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaact 206  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  3094776 aaacagttccgattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaact 3094875  T
Q  207 ctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 306  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||    ||||||||| ||||  |||||||||| ||||||||||||     
T  3094876 ctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgagttttcggactacttgatcggattgctccgaaacttgcccagaaaatcat 3094975  T
Q  307 aaaatattc 315  Q
    |||| ||||    
T  3094976 aaaaaattc 3094984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 95 - 295
Target Start/End: Original strand, 40392615 - 40392815
Alignment:
Q  95 ttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatta 194  Q
    ||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||    
T  40392615 ttttcaagggaaaaacagttcggattatataatctgtactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatatta 40392714  T
Q  195 atcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttcc 294  Q
    |||||||||||||| ||| || || |||||||||||||||  |||||||| |||||||||| ||||||||| ||||||||| ||||  ||||||||||||    
T  40392715 atcttcctaactcttatctttatgatttgggtcattgttagttgttcttagtcaaaaatcaagttttcaagctacttgatcggatttctccgaaacttcc 40392814  T
Q  295 c 295  Q
    |    
T  40392815 c 40392815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 93 - 310
Target Start/End: Complemental strand, 42280972 - 42280756
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||| |||||    
T  42280972 ctttttcaaggtaaaa-cagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatgcatagtcattttagggacaatat 42280874  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||     ||||||||| ||||  | ||||||||    
T  42280873 taatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcggatttttggactacttgatcggattacttcgaaactt 42280774  T
Q  293 ccccagaaaatcagaaaa 310  Q
    ||||||||||||| ||||    
T  42280773 ccccagaaaatcaaaaaa 42280756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 117 - 315
Target Start/End: Original strand, 28916876 - 28917074
Alignment:
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| ||| |||||||||||| ||||||||||||||||    
T  28916876 gattatataatccgaactgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatctttctaactctcatccttc 28916975  T
Q  217 tgttttgggtcattgttacatgttcttact-caaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||||||||||||||||||||||  |  ||||||| ||||||| |  ||||||||| ||||  |||||||||||||||||||||||||||| ||||    
T  28916976 tgttttgggtcattgttacatgttcttggtaaaaaaatcgggttttcga-ctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattc 28917074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 93 - 315
Target Start/End: Original strand, 34853406 - 34853627
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || | ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||| ||| |||||    
T  34853406 ctttttcaaggtaaaa-cagtccggattatataatccaaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatat 34853504  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||  || |||||  ||||||    ||||||||| ||||  ||||||||||    
T  34853505 taatcttcctaactctcatccttctgttttgggtcattgttacctgttcttaggcagaaatcgagttttcggattacttgatcggattgctccgaaactt 34853604  T
Q  293 ccccagaaaatcagaaaatattc 315  Q
    ||||| |||||||||||| ||||    
T  34853605 ccccataaaatcagaaaaaattc 34853627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 108 - 315
Target Start/End: Complemental strand, 11698383 - 11698176
Alignment:
Q  108 aacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactc 207  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||| ||||||| ||||||| || ||||||||| ||| ||||||||||||||||||||    
T  11698383 aacagttcggattatataattcgaactgtatcagcagaaattctaagcatgtttttaacatggatagtcattttagggataatattaatcttcctaactc 11698284  T
Q  208 tcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcaga 307  Q
    ||||||||| ||||| |||||||||||  |||||||| ||||||||| |||||||  | ||||||||| || |  |||||||||||||||||||||||||    
T  11698283 tcatccttccgtttttggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggaatgctccgaaacttccccagaaaatcaga 11698184  T
Q  308 aaatattc 315  Q
    ||| ||||    
T  11698183 aaaaattc 11698176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 84 - 315
Target Start/End: Complemental strand, 14164147 - 14163917
Alignment:
Q  84 ataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttat 183  Q
    ||||| || ||||||||||| |||| || |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| || |||||||||     
T  14164147 ataaacaccctttttcaaggtaaaa-cagttcggattatataatctgaaatgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttag 14164049  T
Q  184 ggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattctt 283  Q
    ||| ||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||| |||||||    ||||||  | ||||||||| | ||  |    
T  14164048 ggacaatattaattttcctaactctcatccttctgtttttggtcattgttacctgttcttagtcaaaaactgcgttttcggggtacttgatcggtttgct 14163949  T
Q  284 ccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||| ||||||||||||||||||| ||||    
T  14163948 ccgaaacctccccagaaaatcagaaaaaattc 14163917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 113 - 315
Target Start/End: Complemental strand, 36165900 - 36165697
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || || ||||||  || ||||||||||||| |||||||||||    
T  36165900 ttcggattatataatccgaactgtatcagcacaaattgtaaacatgtttgtaacatggatagttattttagagacaatattaatcttcttaactctcatc 36165801  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcagg-ttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaat 311  Q
    |||||||||||||||||||||||||||||||| | ||||| | || ||||   | ||||||||| ||||  ||||||||||||||||||||||||||||     
T  36165800 cttctgttttgggtcattgttacatgttcttagttaaaaaccgggttttttgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaa 36165701  T
Q  312 attc 315  Q
    ||||    
T  36165700 attc 36165697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 113 - 315
Target Start/End: Original strand, 9073601 - 9073803
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||| |||||||    
T  9073601 ttcggattatataacccgaactgtattagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaagtctcatc 9073700  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||| ||||||||||||||||||| |||||||| ||||||||| ||||||     ||||||||  ||||  |||||||||||| ||||||||||||||| |    
T  9073701 cttatgttttgggtcattgttacctgttcttagtcaaaaatcgggtttttggactacttgattggattgctccgaaacttcctcagaaaatcagaaaaaa 9073800  T
Q  313 ttc 315  Q
    |||    
T  9073801 ttc 9073803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 50 - 262
Target Start/End: Complemental strand, 4259760 - 4259550
Alignment:
Q  50 ttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaatt 149  Q
    ||||||||||| |||||||||||| || |||| | |||| ||  |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  4259760 ttgattttttcggattatataatttgagcaccccctaaacaccatttttcaagggaaaaataattcggattatataatctgaactgtatcagcacaaatt 4259661  T
Q  150 ctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaa 249  Q
    |||| ||||||||||||||  || ||||||||||||| ||||||||||||||||||| |||||||||  |||| | |||||||||  |||||||| ||||    
T  4259660 ctaagcatgtttgtaacattgatagtcattttatggacaatattaatcttcctaactatcatccttc--ttttcgatcattgttagttgttcttagtcaa 4259563  T
Q  250 aaatcaggttttc 262  Q
    || || |||||||    
T  4259562 aactctggttttc 4259550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 134 - 310
Target Start/End: Original strand, 40328015 - 40328191
Alignment:
Q  134 tgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgtt 233  Q
    |||||||||| |||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  40328015 tgtatcagcataaatactaaacatgtttgtaacatggattgtcattttatggataatattaatcttcctaactctcatctttctgttttgggttattgtt 40328114  T
Q  234 acatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    || |||||||| ||||||||| |||||||    ||||||||| ||||  ||| ||||||||| ||||||||||||||    
T  40328115 acctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctccaaaacttccctagaaaatcagaaaa 40328191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 113 - 315
Target Start/End: Complemental strand, 31519954 - 31519752
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||| || | ||||||| ||| ||||||||||||||||||||  |||    
T  31519954 ttcggattatataatccgaactgtatcagcacaaatcctaaatataattgtaacatgtatagccattttagggacaatattaatcttcctaactcgtatc 31519855  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||| |||||| |||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  || |||||||||||| |||||||||||| |    
T  31519854 cttttgtttttggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccataaaatcagaaaaaa 31519755  T
Q  313 ttc 315  Q
    |||    
T  31519754 ttc 31519752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 308
Target Start/End: Original strand, 6395085 - 6395376
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||| ||||| ||||||||||||| |||||| || |||||||||||| ||||||| | |||| | | |||| || ||||||||||| ||| ||| | |     
T  6395085 aatccaaaaacctcaaaaaataggacgcgctacttaattttttctgatcatataatccaaacaacccttaaacaccctttttcaaggaaaagacagtgca 6395184  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
     |||||||||||  || ||||||||||| |||||  ||| | |||||| |||| ||  |||||||||||| |||||||| ||||||||||||||| ||||    
T  6395185 aattatataatcttaattgtatcagcaccaattccgaacttttttgtagcatggatattcattttatggacaatattaaacttcctaactctcattcttc 6395284  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 308  Q
    |||||| |||||||||||  ||||| || ||||||||| | |||||  | ||||||||| |||| ||| ||||| ||||| |||||||||||    
T  6395285 tgttttaggtcattgttagctgttcgtagtcaaaaatctgattttcgggctacttgatcggattgttctgaaacatcccctgaaaatcagaa 6395376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 310
Target Start/End: Original strand, 21004486 - 21004679
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||||||||||||     |||||| |||||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||| ||||||| |||    
T  21004486 ttcggattatataatccg-----tatcagtacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcataactcttatc 21004580  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttc-cccagaaaatcagaaaa 310  Q
    ||| |||||||||||||||||||||||||||| ||||||||| |||||||  | ||||||||||||||  || |||||||| || | ||||||||||||    
T  21004581 cttttgttttgggtcattgttacatgttcttagtcaaaaatcgggttttccggctacttgatcagattgctctgaaacttctccaaaaaaatcagaaaa 21004679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 16310601 - 16310805
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| ||||||||||||||||| |||| ||  |||||||| | ||||| | ||| |  | ||  | |||| || ||||||||||| |||| || |||     
T  16310601 aatccggaaacttcaaaaaatagggtgcgttagatgatttttccggattacacaatccagaaactccctaaacaccctttttcaaggtaaaa-cagttca 16310699  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
     ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| ||||    
T  16310700 aattatataatccgaactatatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatgcttc 16310799  T
Q  217 tgtttt 222  Q
     |||||    
T  16310800 cgtttt 16310805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 310
Target Start/End: Original strand, 1076554 - 1076849
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttct----gattatataattcgaacacctcataaatactctttttcaagggaaaaacac 112  Q
    |||||||||||||||||||||| | || | |  |||||||||| |    ||||||||||| |||||||| | |||| |||  |||||||||||||||||     
T  1076554 aatccgaaaacttcaaaaaataaggtgtggtccttgatttttttttccagattatataatccgaacacccc-taaacacttattttcaagggaaaaacag 1076652  T
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||   |||||||||||||| ||||| |||||||||| ||||||||||||||||||||||   ||||||||||| ||||||||||||| || ||||||||    
T  1076653 ttcaatttatataatccgaattgtat-agcacaaattttaaacatgtttgtaacatgaatatccattttatggacaatattaatcttcatagctctcatc 1076751  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
     || |||||||  |||||||||  |||||||  ||||||||| | |||||  | ||||||||  ||||  | ||||||||||| | ||||| ||||||    
T  1076752 attttgttttgcatcattgttagttgttcttggtcaaaaatctgattttcgggctacttgattggattgcttcgaaacttcccaaaaaaattagaaaa 1076849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 40994882 - 40994983
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||    
T  40994882 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 40994981  T
Q  206 tc 207  Q
    ||    
T  40994982 tc 40994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 136 - 306
Target Start/End: Original strand, 36980689 - 36980859
Alignment:
Q  136 tatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttac 235  Q
    |||||||||||||| | ||||||||||||||||| ||  |||||||| ||| |||||| ||||| |||||||| |||||||| ||||||||||||||||     
T  36980689 tatcagcacaaattatgaacatgtttgtaacatggataatcattttaaggacaatattgatctttctaactcttatccttctattttgggtcattgttag 36980788  T
Q  236 atgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 306  Q
     | |||||| ||||||||| | |||||  | ||||||||| ||||  |||||||||||| |||||||||||    
T  36980789 ctattcttagtcaaaaatccgattttcgggctacttgatcggattgctccgaaacttccacagaaaatcag 36980859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 118 - 303
Target Start/End: Original strand, 28423523 - 28423707
Alignment:
Q  118 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 217  Q
    ||||||||||| |||||| ||||  ||||||||||||||||||||||||||| ||   |||||||  || ||||||||||||||||||||||||||||||    
T  28423523 attatataatctgaactgcatcactacaaattctaaacatgtttgtaacatggatgaacattttacagacaatattaatcttcctaactctcatccttct 28423622  T
Q  218 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 303  Q
     ||||| ||||||| ||  |||||||| |||||||| || |||||  | ||||||||| ||||  ||||||||||  |||||||||    
T  28423623 attttgcgtcattg-tagttgttcttagtcaaaaattagtttttcgggctacttgatcggattactccgaaacttagccagaaaat 28423707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 62 - 303
Target Start/End: Original strand, 36317837 - 36318083
Alignment:
Q  62 gattatataattcgaacacctcataaatactc-tttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtt 160  Q
    ||||||| |||||||||| | | |||| || | ||||| |||||||||||| |||||||||||||||| ||||||||| |||||||||| | ||||||||    
T  36317837 gattatagaattcgaacaacccctaaacacccattttttaagggaaaaacagttcggattatataatctgaactgtattagcacaaattgtgaacatgtt 36317936  T
Q  161 ----tgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcag 256  Q
        ||||||||| ||  |||||||| ||| |||||||||||| |||||||| ||| |||  ||||||||||||||||  |||||||| ||| ||||  |    
T  36317937 aatttgtaacatggataatcattttaaggacaatattaatctttctaactcttatctttcaattttgggtcattgttagctgttcttagtcagaaattcg 36318036  T
Q  257 gttttcaagatacttgatcagattcttccgaaacttccccagaaaat 303  Q
     |||||  | ||||||||| |||  |||| |||||| ||||||||||    
T  36318037 attttcgggctacttgatcggatagttccaaaactttcccagaaaat 36318083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 37248560 - 37248764
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||||| ||||||||||  ||| ||  |||| ||| | ||||| ||||| |  | ||| | |||| ||  |||||||||| |||| || || |    
T  37248560 aatccgaaaacttaaaaaaatagggcgcgttagatgatgtttccggattacataatccagaaaccccctaaacaccatttttcaaggtaaaa-cagtttg 37248658  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
     ||||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||| ||| |||||||||||||||||||||||| ||||    
T  37248659 aattatataatccgaattgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatcttcctaactctcatgcttc 37248758  T
Q  217 tgtttt 222  Q
     |||||    
T  37248759 cgtttt 37248764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 54 - 234
Target Start/End: Original strand, 1373978 - 1374158
Alignment:
Q  54 ttttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaa 153  Q
    |||||||  |||||| |||||||||||  | |||| || ||| || | |||||||||| |||||||||| ||||||||||| ||||| |||||||| |||    
T  1373978 ttttttcgaattataaaattcgaacactccctaaacacccttatttatgggaaaaacaattcggattatgtaatccgaactatatcatcacaaattataa 1374077  T
Q  154 acatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
     ||||||||||| ||| || ||||  ||| | |  ||||||||| | ||||||||||||||| |||||| |||||||||||    
T  1374078 gcatgtttgtaatatggatagtcagattaagaactatattaatcattctaactctcatccttatgttttaggtcattgtta 1374158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 306
Target Start/End: Original strand, 34645520 - 34645667
Alignment:
Q  159 tttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggt 258  Q
    ||||||||||  || ||||||||| ||| ||| ||||| || |||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||    
T  34645520 tttgtaacatagatagtcattttaaggataattttaatttttctaactctcatccttctgttttggatcattgttacatgttcttagtcaaacatccggt 34645619  T
Q  259 tttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 306  Q
    ||||  | |||||||||| |||  ||||||| || |||  ||||||||    
T  34645620 tttcgggctacttgatcacattgctccgaaattttccccaaaaatcag 34645667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 7982478 - 7982572
Alignment:
Q  116 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctca 210  Q
    ||||||||||||| |||||||||| ||||||||| | |||||||||||||||| ||| ||||||||| ||| |||||||||||||| ||||||||    
T  7982478 ggattatataatctgaactgtatcggcacaaattttgaacatgtttgtaacataaatagtcattttaaggacaatattaatcttcccaactctca 7982572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 54 - 308
Target Start/End: Complemental strand, 10840880 - 10840625
Alignment:
Q  54 ttttttctgattatataattcgaacacctc--ataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattct 151  Q
    |||||| | |||||| ||| ||||||||||  ||||||||  ||||| | |||||| ||| | ||||||||||| | |||| ||||| ||||||||||||    
T  10840880 tttttttttattatagaatccgaacacctcctataaataccatttttaaggggaaatacaatacggattatatatttcgaattgtattagcacaaattct 10840781  T
Q  152 aaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaa 251  Q
     |   | ||||||||||| ||   || | || ||| |||||||||||||||||||||||||||||||  || |||| ||||||  || ||  ||||||||    
T  10840780 gagtttttttgtaacatggataaccagtgtaaggacaatattaatcttcctaactctcatccttctggattaggtccttgttagttg-tcccactcaaaa 10840682  T
Q  252 atcaggttttc-aagatacttgatcagattcttccgaaacttccccagaaaatcagaa 308  Q
    |||||||||||  |  ||||||||||| ||  ||||||||||||||||||||||||||    
T  10840681 atcaggttttcggatctacttgatcag-ttgctccgaaacttccccagaaaatcagaa 10840625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 33472168 - 33472277
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||| |||| ||||||| ||||| |  ||||| |||||| ||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  33472168 ttcgaattacataatccaaactgcacaagcaccaattcttaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcatc 33472267  T
Q  213 cttctgtttt 222  Q
    ||| ||||||    
T  33472268 cttgtgtttt 33472277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 33472379 - 33472484
Alignment:
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||| ||||||| ||||| |||| ||| |||||| ||||||||||||||||| || ||||||||| ||| ||||||||||||||||||| ||||||||     
T  33472379 gattacataatccaaactgcatcatcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactatcatccttg 33472478  T
Q  217 tgtttt 222  Q
    ||||||    
T  33472479 tgtttt 33472484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 10833577 - 10833468
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||  |||||| | |||| | |||||| |||||| ||||||||||||||||| || ||||||||| ||| ||||||||||||||||||| |||||    
T  10833577 ttcggatttcataatctggactgcaccagcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactttcatc 10833478  T
Q  213 cttctgtttt 222  Q
    ||| ||||||    
T  10833477 cttttgtttt 10833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 120 - 306
Target Start/End: Original strand, 7981618 - 7981804
Alignment:
Q  120 tatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgt 219  Q
    |||| |||| |||||||| || |||||||| | ||||||||||||||||| ||  | |||||| ||| ||| ||||  |||||||| |||||||||||||    
T  7981618 tatagaatctgaactgtaccaacacaaattttgaacatgtttgtaacatggatatttattttaaggacaatgttaagtttcctaaccctcatccttctgt 7981717  T
Q  220 tttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 306  Q
    ||||||| |||||||  |||| ||| | ||||||    |||||| | ||||||||| ||||  | |||||||||| | |||||||||    
T  7981718 tttgggttattgttagttgttattaattaaaaatgcaattttcaggctacttgatcggattgcttcgaaacttcctccgaaaatcag 7981804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 31234580 - 31234471
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||  ||||||||||   | |||||| |||||| ||||| ||||||||||| || ||||||||| ||| |||||||||||||||||||| ||||    
T  31234580 ttcggattacgtaatccgaacaacaccagcaccaattctgaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaactcccatc 31234481  T
Q  213 cttctgtttt 222  Q
    | | ||||||    
T  31234480 catgtgtttt 31234471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 9845323 - 9845385
Alignment:
Q  153 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 215  Q
    ||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||| |||||    
T  9845323 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcgtcctt 9845385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 8621697 - 8621606
Alignment:
Q  116 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactct 208  Q
    ||||||||||| |||||||||||||||||||||| | ||  |||| |||||||| ||  |||||||| ||| |||||||||||| ||||||||    
T  8621697 ggattatataacccgaactgtatcagcacaaatt-tgaatttgttcgtaacatggataatcattttaaggataatattaatctttctaactct 8621606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 9845490 - 9845573
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaat 196  Q
    ||||||||| ||||||| |||||  ||||||| |||||||||||||||||||||||| ||  |||||||| ||  |||||||||    
T  9845490 ttcggattacataatccaaactgcgtcagcaccaattctaaacatgtttgtaacatggatactcattttaagggcaatattaat 9845573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 35677286 - 35677172
Alignment:
Q  55 tttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaa 154  Q
    |||||| ||||||| |||||||||||| |||||| || ||| |||| || ||||||| || | |||||||||| | |||| |||||| ||||| | | |     
T  35677286 tttttcagattataaaattcgaacaccccataaacacccttattcagggaaaaaacaatttgtattatataattcaaactatatcagtacaaaatttgag 35677187  T
Q  155 catgtttgtaacatg 169  Q
    |||||||||||||||    
T  35677186 catgtttgtaacatg 35677172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 24627903 - 24627988
Alignment:
Q  137 atcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||| ||| |||||| ||||||||||||||||  || |||||||||  || |||||||||||||||| || |||||||| ||||||    
T  24627903 atcaacaccaattctgaacatgtttgtaacattgatagtcattttaatgacaatattaatcttcctagctttcatccttgtgtttt 24627988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 24627569 - 24627629
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaa 77  Q
    ||||||||||  ||||||||||||| |||||||||||||||||| ||||||| ||| ||||    
T  24627569 aatccgaaaatctcaaaaaataggacgcgctatttgattttttcggattatagaatccgaa 24627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 24627697 - 24627761
Alignment:
Q  139 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttccta 203  Q
    |||||| |||||| || |||||||||||||| || ||||||||| ||| ||||||||||||||||    
T  24627697 cagcaccaattctgaatatgtttgtaacatggatagtcattttaaggacaatattaatcttccta 24627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 253
Target Start/End: Original strand, 39093605 - 39093745
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||||||||| ||| ||||||| || ||||| ||| ||||||||||||||  ||   || ||||  ||  ||||||||||| | || |||||||    
T  39093605 ttcggattatataatctgaaatgtatcaacataaattataagcatgtttgtaacatacataaccagtttaatgaccatattaatctttcaaagtctcatc 39093704  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaat 253  Q
     || |||||| |||||||||||  |||||||| | ||||||    
T  39093705 tttatgttttaggtcattgttaattgttcttagtaaaaaat 39093745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 31234764 - 31234689
Alignment:
Q  140 agcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 215  Q
    ||||| |||||| |||||||| |||||||| || ||||||||| ||| ||||||||||||| || || ||||||||    
T  31234764 agcaccaattctgaacatgttcgtaacatggatcgtcattttaaggacaatattaatcttcttagctttcatcctt 31234689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 33472069 - 33472120
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattata 68  Q
    ||||||||||| ||||||||||||  |||||||||||||||||| |||||||    
T  33472069 aatccgaaaacctcaaaaaatagggcgcgctatttgattttttcggattata 33472120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 41530812 - 41530881
Alignment:
Q  153 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    ||||||||||||||||| || ||||||| | ||| |||||||||||||||| || || ||||| ||||||    
T  41530812 aacatgtttgtaacatggatagtcatttcaaggacaatattaatcttcctagctttcgtccttgtgtttt 41530881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 32504363 - 32504309
Alignment:
Q  115 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatg 169  Q
    |||||||||||||  ||||| |||||||||||||| | || ||||||||||||||    
T  32504363 cggattatataatatgaactatatcagcacaaattttgaatatgtttgtaacatg 32504309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 7965992 - 7965935
Alignment:
Q  153 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctca 210  Q
    ||||||||||||||||| || |||| |||| ||| |||| || |||||||||||||||    
T  7965992 aacatgtttgtaacatggatagtcactttaaggacaatactagtcttcctaactctca 7965935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 7982422 - 7982471
Alignment:
Q  85 taaatactctttttcaagggaaaaacacttcggattatataatccgaact 134  Q
    ||||||| || |||||||| ||||||| || |||||||||||||||||||    
T  7982422 taaataccctatttcaaggaaaaaacagttaggattatataatccgaact 7982471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 7966057 - 7966005
Alignment:
Q  116 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacat 168  Q
    |||| ||||||| |||||||| || ||||||||| | ||||||||||||||||    
T  7966057 ggataatataattcgaactgtttcggcacaaattttgaacatgtttgtaacat 7966005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 35676695 - 35676631
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacc 81  Q
    |||||| ||||| |||||||||||  ||||||| |||||||| | ||||| ||||| ||||||||    
T  35676695 aatccggaaactacaaaaaatagggcgcgctatatgatttttccggattacataatccgaacacc 35676631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 32842129 - 32841831
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||||||  | ||||||   ||||| ||||| |||||||| |||||| || ||||||||||||||||||| ||||    
T  32842129 aatccggaaacttcaaaaaatagggcgcgctagataatttttcaagattacataatccgaacaccccataaacaccctttttcaagggaaaaacagttcg 32842030  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatgg-agaatattaatcttcctaactctcatcctt 215  Q
    ||||||||||| |||| |||||||||||||||| ||||||||||||||||||| || ||||||||| || | ||||||||||||||||||||||||||||    
T  32842029 gattatataattcgaattgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggaacaatattaatcttcctaactctcatcctt 32841930  T
Q  216 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    || ||||| ||||||||||||||||| || ||||||||| |||||||  | ||||||||| ||||  ||||||| || ||||||||||||||||| ||||    
T  32841929 ctattttgagtcattgttacatgttcgtagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaaatt-cccagaaaatcagaaaaaattc 32841831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 38871635 - 38871932
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||||||| ||||||||  ||| ||  |||| ||| | ||||| ||||| |||| |||   |||| |   |||||||||| |||| || ||||    
T  38871635 aatccgaaaacttcataaaatagggggcgttacatgatgtttccggattacataatccgaaaaccctctaaacatcttttttcaaggtaaaa-cagttcg 38871733  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||| ||||||||||||||||||||||||    
T  38871734 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaataataatcttcctaactctcatccttc 38871833  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||||   ||||| ||| ||||  |||||||||| ||||||||||||||||| ||||    
T  38871834 tgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttaatcggattgctccgaaactttcccagaaaatcagaaaaaattc 38871932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 63 - 315
Target Start/End: Original strand, 20891623 - 20891873
Alignment:
Q  63 attatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttg 162  Q
    |||| ||||| |||| ||| | |||| || ||||||||||| |||| || |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20891623 attacataatccgaaaaccccctaaacaccctttttcaaggtaaaa-cagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttg 20891721  T
Q  163 taacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 262  Q
    ||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| | |||||| ||||||||| |||||||    
T  20891722 taacatggatagtcattttagggataatattaatcttcctaactctcatccttctgttttgggttattgttacctattcttagtcaaaaatcgggttttc 20891821  T
Q  263 aagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    | | ||||||||| ||||  |||||||||||||||||||| ||||||| ||||    
T  20891822 aggctacttgatcggattgctccgaaacttccccagaaaa-cagaaaaaattc 20891873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 15799189 - 15799486
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||| ||  |||| ||| | ||||| ||||| |||| ||| | |||| || ||||||||| | |||| || |||     
T  15799189 aatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaaccccctaaacaccctttttcaacgtaaaa-catttca 15799287  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||| || ||||||||    
T  15799288 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattattcttcctaattcgcatccttc 15799387  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |  | ||||||| | ||||  |||||||||| |||||||||||| |||| ||||    
T  15799388 tgttttgggtcattgttacatgttcttagtcaaaaatcgggtttccgggctacttgaccggattgctccgaaacttgcccagaaaatcaaaaaaaattc 15799486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 17 - 310
Target Start/End: Original strand, 33487574 - 33487867
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||||||||||||||||  ||| ||| |||| ||||| | ||| ||||| || | ||  | |||| || | ||||||||| |||| || ||||    
T  33487574 aatccgaaaacttcaaaaaatagggcgcgttatatgatgttttcgggttacataatccggaaactccctaaacaccccttttcaaggtaaaa-cagttcg 33487672  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||    
T  33487673 gattatataatccgaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 33487772  T
Q  217 tg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
     | |||||||||||||||||||||||||| |||||||||  ||||||  | |||||||||   ||  ||||||||||||||||||||||||||||    
T  33487773 agtttttgggtcattgttacatgttcttagtcaaaaatcgagttttcgggctacttgatcgatttgctccgaaacttccccagaaaatcagaaaa 33487867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 39524740 - 39525037
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||| ||||||||||  | | ||  |||| ||||| ||||| |||||||| | ||| | |||| || ||||||||||| |||| || ||||    
T  39524740 aatccggaaacttaaaaaaatagggcgtgttacatgatgttttcggattacataattcggaaaccccctaaacaccctttttcaaggtaaaa-cagttcg 39524838  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || ||||||||| | | |||||||||||||||||||||||||||||    
T  39524839 gattatataatccgaactgtatcatcacaaattctaaacatatttgtaatatgtatagtcattttaggaacaatattaatcttcctaactctcatccttc 39524938  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||||||||||||||| |||||||| || |||||  ||||||| |  ||||||||||||||  ||||||| |||||||||||||||||||| ||||    
T  39524939 tgttttgggtcattgttacttgttcttagtccaaaattgggttttcgaactacttgatcagattgctccgaaatttccccagaaaatcagaaaaaattc 39525037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 45 - 308
Target Start/End: Original strand, 13908539 - 13908802
Alignment:
Q  45 gctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcac 144  Q
    |||| ||||||||||| |||||||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||||||| ||     
T  13908539 gctacttgattttttcggattatataatttgaacacctcctaaacactctttttcaagggaaaaacagttcggattatataatccgaattgtatcaacat 13908638  T
Q  145 aaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttctta 244  Q
    ||||| ||||||||||||||||| | || ||||||||||||| ||||||||||||| ||||  |||||||||| ||||| ||||||||||  |||||||     
T  13908639 aaattttaaacatgtttgtaacacggatagtcattttatggacaatattaatcttcttaaccttcatccttctcttttgagtcattgttagctgttcttt 13908738  T
Q  245 ctcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 308  Q
     ||||||||||||||||||   ||||||||| ||||  |||||||  |||||| ||||| ||||    
T  13908739 gtcaaaaatcaggttttcagactacttgatcggattgctccgaaatatccccaaaaaattagaa 13908802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 93 - 315
Target Start/End: Complemental strand, 31221420 - 31221199
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||| |||||    
T  31221420 ctttttcaaggtaaaa-cagttcggattatataatccaaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttagggacaatat 31221322  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||   |||||||  | ||||||||| ||||  ||||||||||    
T  31221321 taatcttcctaactctcatctttctgttttgggtcattgttacatgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaactt 31221222  T
Q  293 ccccagaaaatcagaaaatattc 315  Q
    |||||||||||||||||| ||||    
T  31221221 ccccagaaaatcagaaaaaattc 31221199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 106 - 315
Target Start/End: Complemental strand, 31929193 - 31928985
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||    
T  31929193 aaaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcatttta-ggacaatattaatcttcctaac 31929095  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    |||||||||||||||||| ||||||||||| |||||||| | ||||| |||||||||  | ||||||||| ||||  |||||||||||||||||||||||    
T  31929094 tctcatccttctgttttgagtcattgttacctgttcttagttaaaaaccaggttttcgggctacttgatcggattgctccgaaacttccccagaaaatca 31928995  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  31928994 gaaaaaattc 31928985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 6156695 - 6156992
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| || || |||||||| |||| |  ||||    
T  6156695 aatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctctttcaaggtaaaaccg-ttcg 6156793  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||    
T  6156794 gattatataatacgaattgtatcagcataaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 6156893  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||| ||||||||||||||||||||| | ||||| | ||||||   | ||||||||| ||||  |||||||||| ||||||||||||||||| ||||    
T  6156894 tgtttttggtcattgttacatgttcttagttaaaaaccgggtttttgggctacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattc 6156992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 23 - 309
Target Start/End: Original strand, 29862582 - 29862868
Alignment:
Q  23 aaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattat 122  Q
    ||||||||||||||||||  ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| ||  |||||||||| |||| || |||| |||||    
T  29862582 aaaacttcaaaaaatagggcgcgttaggtgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaa-cagttcgaattat 29862680  T
Q  123 ataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctg-ttt 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||| ||||||||| | |||    
T  29862681 ataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatccttccgtttt 29862780  T
Q  222 tgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 309  Q
    ||||||||| |||| |||||||| |||||||||| ||||||  | ||||||||  ||||  ||||||||||||| |||||||||||||    
T  29862781 tgggtcattattacctgttcttagtcaaaaatcaagttttcgggctacttgatgtgattgctccgaaacttccctagaaaatcagaaa 29862868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 116 - 315
Target Start/End: Complemental strand, 37183840 - 37183641
Alignment:
Q  116 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 215  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| ||    
T  37183840 ggattatataatctgaactgtatcaacacaaattctaaatatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatcttt 37183741  T
Q  216 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
     ||||||||||||||||||| |||||||| ||||||||| ||||||||   ||||||||| ||||  |||||||| |||||| |||||||||||| ||||    
T  37183740 ttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacatccccataaaatcagaaaaaattc 37183641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 106 - 315
Target Start/End: Original strand, 7884245 - 7884455
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| |||| ||||||||||| ||||||||||| ||||||||||||| |||||||||| ||| |||||||||||| ||| ||||||||||||||||||    
T  7884245 aaaacagttcgaattatataatctgaactgtatcaacacaaattctaaatatgtttgtaatatgtattgtcattttagggacaatattaatcttcctaac 7884344  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttcccc-agaaaatc 304  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| | |||||  | ||||||||| ||||  |||||||||||||| | ||||||    
T  7884345 tctcatccttctgttttgggtcattgttacatgttcttagtcaagaatcggattttcgggctacttgatcggattgctccgaaacttcccctataaaatc 7884444  T
Q  305 agaaaatattc 315  Q
    |||||| ||||    
T  7884445 agaaaacattc 7884455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 54 - 310
Target Start/End: Original strand, 26095092 - 26095348
Alignment:
Q  54 ttttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaa 153  Q
    ||||||| ||||| ||||| |||||||| |||||| |||||||||||| ||||||| | |||||||||||||||| ||| ||||||| || |||||||||    
T  26095092 ttttttcggattacataatccgaacaccccataaacactctttttcaaaggaaaaatagttcggattatataatctgaattgtatcaacataaattctaa 26095191  T
Q  154 acatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaat 253  Q
    |||||||||||||||| || ||||| ||||||| ||||||||||||| |||||||||| ||||| ||||| |||||||||   |||| | | | ||||||    
T  26095192 acatgtttgtaacatggatagtcatattatggacaatattaatcttcttaactctcattcttctattttgtgtcattgttggctgttttcagtaaaaaat 26095291  T
Q  254 caggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    | ||||||   | |||||| |||||||  ||||||||||||||||||||||||||||    
T  26095292 cgggtttttgggctacttgttcagattgctccgaaacttccccagaaaatcagaaaa 26095348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 93 - 315
Target Start/End: Complemental strand, 38692864 - 38692643
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| ||| |||||    
T  38692864 ctttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttaaggacaatat 38692766  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||   |||||| ||||||||| |||||||    |||||| || ||||  ||||||||||    
T  38692765 taatattcataactctcatctttctgttttgggtcattgttacccattcttagtcaaaaatcgggttttcggactacttggtcggattgctccgaaactt 38692666  T
Q  293 ccccagaaaatcagaaaatattc 315  Q
    ||||| |||||||||||| ||||    
T  38692665 ccccaaaaaatcagaaaaaattc 38692643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 93 - 309
Target Start/End: Complemental strand, 4064801 - 4064585
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| ||| ||| |    
T  4064801 ctttttcaaggtaaaa-cagttcgaattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgt 4064703  T
Q  193 taatcttcctaactctcatccttct-gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaact 291  Q
    |||||||||||||| ||||||||||  ||||||||||||||||| |||||||| |||||||||   |||||  | ||||||||  ||||  |||||||||    
T  4064702 taatcttcctaactatcatccttctatttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaact 4064603  T
Q  292 tccccagaaaatcagaaa 309  Q
    ||||||||||||||||||    
T  4064602 tccccagaaaatcagaaa 4064585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 106 - 315
Target Start/End: Original strand, 15957801 - 15958010
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| || ||||||||||||| |||||||||||| ||||||||||||||||||||||||||  || || |||||| ||| ||||||||||||||||||    
T  15957801 aaaacagtttggattatataatctgaactgtatcagtacaaattctaaacatgtttgtaacatagatagtaattttagggacaatattaatcttcctaac 15957900  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    |||  | ||| |||||||||||||| |||| |||||||| |||||||||||||||||    ||||||||| ||||  |||||||||||||||||||||||    
T  15957901 tctggttcttttgttttgggtcattattacctgttcttagtcaaaaatcaggttttcggactacttgatcggattgctccgaaacttccccagaaaatca 15958000  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  15958001 gaaaaaattc 15958010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 106 - 315
Target Start/End: Complemental strand, 28083447 - 28083238
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| | ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| || ||||||||| ||| |||||||||||| |||||    
T  28083447 aaaacagtccggattatataatccgaactgtatcagcacaaattataaacatatttgtaacatggatagtcattttagggacaatattaatctttctaac 28083348  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    | ||||||||||||||| |||||||||||| ||||||||   |||||||  ||||||    ||||||||| ||||  ||||| |||||||||||||||||    
T  28083347 tttcatccttctgtttttggtcattgttacctgttcttaggaaaaaatcgagttttcggactacttgatcggattgctccgatacttccccagaaaatca 28083248  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  28083247 gaaaaaattc 28083238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 50 - 310
Target Start/End: Complemental strand, 40613800 - 40613540
Alignment:
Q  50 ttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaatt 149  Q
    |||| |||||| ||||||| |||||||||| | |||||| ||  ||||| |||||||||||| |||||||||||||||||||||||||| |||| |||||    
T  40613800 ttgaatttttcagattatagaattcgaacatcccataaacaccattttttaagggaaaaacagttcggattatataatccgaactgtatgagcaaaaatt 40613701  T
Q  150 ctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaa 249  Q
     | ||||||||||||||||| ||  | |||||| ||| | ||||||||||||||||| |||||||| ||| || |||||||| ||  |||||||| | ||    
T  40613700 atgaacatgtttgtaacatggataattattttaaggacattattaatcttcctaactttcatccttatgtattaggtcattgctaactgttcttagttaa 40613601  T
Q  250 aaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    |||||  |||||  || ||||||||||||||  |||||||||||| || ||||| ||||||    
T  40613600 aaatccagtttttgagctacttgatcagattgctccgaaacttcctcaaaaaataagaaaa 40613540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 94 - 303
Target Start/End: Original strand, 12847483 - 12847692
Alignment:
Q  94 tttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatt 193  Q
    ||||||||| |||||||| ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||  ||  |||||||||||| ||||||    
T  12847483 tttttcaagtgaaaaacagttcggtttaaataatccgaactgtatcagcacaaattctgaacatgtttgtaacatagataatcattttatggacaatatt 12847582  T
Q  194 aatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttc 293  Q
    |||||||| ||||||| |  ||||||||||| |||||||||  |||||||| |||||||||  ||||||  | |||||||||| |||  || ||||||||    
T  12847583 aatcttcccaactctcgtatttctgttttggatcattgttagctgttcttagtcaaaaatcgagttttcgggctacttgatcatattactctgaaacttc 12847682  T
Q  294 cccagaaaat 303  Q
    ||||| ||||    
T  12847683 cccagcaaat 12847692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 310
Target Start/End: Original strand, 27212672 - 27212960
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||  |||||||||||| |||| ||  |||||||||| ||||| ||||   ||||||  | | || || |||||| |||||||||||| ||||    
T  27212672 aatccgaaaatctcaaaaaatagggtgcgttacatgattttttcggattacataaccagaacacaccctgaacaccctttttgaagggaaaaacagttcg 27212771  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||| |||||| |||||| ||||||| ||||||||||||||||||  || |||     ||| | |||||||||||||||||||||||||||||    
T  27212772 gattatataattcgaactatatcagtacaaattataaacatgtttgtaacatagatagtc-----atgaacaatattaatcttcctaactctcatccttc 27212866  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    || |||| ||||||||||| |||||||| ||||||||| |||||||    || |||||  ||||  ||||| ||||||| ||||||||||||||    
T  27212867 tggtttgagtcattgttacctgttcttagtcaaaaatcgggttttcggactatttgattggattgctccgatacttccctagaaaatcagaaaa 27212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 38372273 - 38372562
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||| ||||||||||  | | ||  |||| ||| | ||||| |||||||| | ||| | ||||||| ||||||||||| |||| || |||     
T  38372273 aatccggaaacttaaaaaaatagggcgggttacatgatgtttccggattacataattcggaaaccccttaaataccctttttcaaggtaaaa-cagttca 38372371  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||| || ||||||||| ||| ||||||||||||||||||||||||  |||    
T  38372372 gattatataatccgaactgtattagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatcttcctaactctcataattc 38372471  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
            |||||||||||||||||||| | ||||||  |||||||  | ||||||||| |||   |||||||||||||||||| ||||||||| ||||    
T  38372472 --------gtcattgttacatgttcttagttaaaaattgggttttcgggctacttgatcggatcgctccgaaacttccccagaagatcagaaaaaattc 38372562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 95 - 310
Target Start/End: Original strand, 23269375 - 23269593
Alignment:
Q  95 ttttcaagggaaaaacacttcggattatataatccgaactgtatcagca---caaattctaaacatgtttgtaacatgaattgtcattttatggagaata 191  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||| ||   ||| |||| |||||||||||||||||||   |||||||| ||| ||||    
T  23269375 ttttcaagggaaaaacagttcagattatataatccgaactttatcatcatcacaacttctgaacatgtttgtaacatgaacaatcattttaaggacaata 23269474  T
Q  192 ttaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaact 291  Q
    |||||||||||||||||||| ||||| || ||||| || |||| ||||||||| ||||||||| |||||||  | ||||||||| ||||  | |||||||    
T  23269475 ttaatcttcctaactctcattcttctattctgggttatagttagatgttcttattcaaaaatcgggttttcgggctacttgatcggattgcttcgaaact 23269574  T
Q  292 tccccagaaaatcagaaaa 310  Q
    |||||||||||||| ||||    
T  23269575 tccccagaaaatcataaaa 23269593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 101 - 305
Target Start/End: Complemental strand, 24203758 - 24203554
Alignment:
Q  101 agggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttc 200  Q
    |||| |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  | ||  |||||||| ||| ||||||||| |||    
T  24203758 agggtaaaacagttcgggttatataatccgaactgtatcagcataaattctaaacatgtttgtaactgggataatcattttaaggacaatattaatgttc 24203659  T
Q  201 ctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaa 300  Q
    |||||||||| ||||||||||||| |||||||||| |||||||| | ||||||   ||||||  | || |||||| ||||  ||||||||||||| ||||    
T  24203658 ctaactctcaaccttctgttttggatcattgttacctgttcttagttaaaaattgagttttcgggctatttgatcggattgctccgaaacttcccaagaa 24203559  T
Q  301 aatca 305  Q
    |||||    
T  24203558 aatca 24203554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 308
Target Start/End: Complemental strand, 6801085 - 6800794
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaaggg--aaaaacactt 114  Q
    ||||||||||| ||||||  ||||  | |||||||||||||||| ||||||| |||   |||||||| | || || | |||| |||||  ||||||| ||    
T  6801085 aatccgaaaacctcaaaa--tagggcgtgctatttgattttttcggattataaaatctaaacacctctttaaaacccctttttaaggggaaaaaacagtt 6800988  T
Q  115 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 214  Q
    |  ||||||||||  |||||||||||||| ||||| | |||||||||| |||||| |  ||||||||| ||| |||  |||||||||| | |||||||||    
T  6800987 caaattatataatttgaactgtatcagcataaattatgaacatgtttgcaacatggacagtcattttaaggacaatgctaatcttcctcattctcatcct 6800888  T
Q  215 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 308  Q
    |||||||| ||||||||||| ||||||||| ||||||||| ||||||| |  |||||||||| |||  |||||||||| |||| ||||||||||    
T  6800887 tctgttttaggtcattgttagatgttcttagtcaaaaatccggttttcgaactacttgatcatattgctccgaaacttgcccaaaaaatcagaa 6800794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 40620147 - 40619845
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||   || ||| |||| ||||| ||||| ||||| || | ||| | |||| |   |||||||||| ||||  | |||     
T  40620147 aatccggaaacttcaaaaaatagggcacgttatatgatgttttcggattacataatccggaaaccccctaaacatcatttttcaaggtaaaat-atttca 40620049  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcat-cctt 215  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||||||| |   |||||||| ||| |||||||||||||||||||||||| ||||    
T  40620048 gattatataatccgaattgtatcagtacaaattctaaacatgcttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccctt 40619949  T
Q  216 ctgttttgggtcattgttacatgttc----ttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaat 311  Q
    |||||||||||||||||||| |||||    ||| ||||||||| ||||| |    |||||| || |||| |||||||||||||| ||||||||| ||||     
T  40619948 ctgttttgggtcattgttacctgttcttaattagtcaaaaatcgggtttccggactacttggtcggattgttccgaaacttccctagaaaatcataaaaa 40619849  T
Q  312 attc 315  Q
    ||||    
T  40619848 attc 40619845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 306
Target Start/End: Original strand, 27158049 - 27158336
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||| ||||| ||||||| || | ||||||| ||| |||||   ||||||| ||| |||||||| |||| | ||  |||| ||||  ||||||| | ||    
T  27158049 aatccaaaaacgtcaaaaattatggtgcgctacttgttttttcgggattatagaatccgaacaccccatagacaccattttacaaga-aaaaacagt-cg 27158146  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| |||||||||||||||||||| | |||||||||| |||||| || ||||||||| ||| |||||||| ||||||||  ||||||||||    
T  27158147 gattatataatctgaactgtatcagcacaaattatgaacatgtttgaaacatggatagtcattttaaggacaatattaagcttcctaatcctcatccttc 27158246  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 306  Q
      |||||||||||| |||  |||| ||| | ||||||  |||||||| | ||||||||||||||  |||||||||| |||||||||||||    
T  27158247 acttttgggtcattattagttgttattaataaaaaattcggttttcaggctacttgatcagattgctccgaaactttcccagaaaatcag 27158336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 134 - 315
Target Start/End: Original strand, 14111947 - 14112126
Alignment:
Q  134 tgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgtt 233  Q
    |||||||||||||||| |||| |||||||||||||| || ||||||||| ||| ||||||||||||||||||| |||||||  | |||||||| ||||||    
T  14111947 tgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatcct--tattttgggttattgtt 14112044  T
Q  234 acatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    || |||||||| ||||||||| |||||||    ||||||||  ||||  |||||||||||||||||||||||||||| ||||    
T  14112045 acttgttcttagtcaaaaatcgggttttcggactacttgataggattgctccgaaacttccccagaaaatcagaaaaaattc 14112126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 305
Target Start/End: Complemental strand, 11186333 - 11186046
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||| ||||||||||||  ||| |  ||| ||||||| ||||||| |||||||||| | |||||  || | ||||||  |||||||||||| |    
T  11186333 aatccgaaaacctcaaaaaatagggcgcgttccttgcttttttcggattatagaattcgaacatcccataatcacccattttcagaggaaaaacactttg 11186234  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||| ||||||| |   | ||||||||||| ||   |  ||||  ||  |||||||| ||| | |||||||||||||    
T  11186233 gattatataatccgaactgtatcagcataaattctgagtctatttgtaacatggataaccgatttaatgaccatattaattttcttgactctcatccttc 11186134  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    |||||| ||| ||||||| ||||||||| | ||||||  |||||||||  |||||||| |||||  ||||||||||| |||||||||||    
T  11186133 tgttttaggtaattgttagatgttcttagtaaaaaattcggttttcaa-ctacttgattagattgctccgaaacttctccagaaaatca 11186046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 140 - 310
Target Start/End: Complemental strand, 12465154 - 12464984
Alignment:
Q  140 agcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgt 239  Q
    ||||||||| |||||||| ||||||| ||| || || |||||| ||| ||||||||||||| ||||||| |||||| |||||||| |||||||||| |||    
T  12465154 agcacaaatcctaaacatatttgtaatatgtatagttattttagggacaatattaatcttcataactcttatccttttgttttggatcattgttacttgt 12465055  T
Q  240 tcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    ||||| ||||||||| ||||||||   ||||||||| ||||  || |||||| ||||| ||||||||||||    
T  12465054 tcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaactaccccaaaaaatcagaaaa 12464984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 94 - 226
Target Start/End: Original strand, 26093486 - 26093618
Alignment:
Q  94 tttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatt 193  Q
    |||||||| ||||||| | ||| ||||||||||||| |||| |||||||| ||||| | ||||||||| ||||||| || ||||||||||||| || |||    
T  26093486 tttttcaatggaaaaatagttcagattatataatcctaactatatcagcataaattatgaacatgtttctaacatggatagtcattttatggacaaaatt 26093585  T
Q  194 aatcttcctaactctcatccttctgttttgggt 226  Q
    ||||||| |||||||||||||||||||||||||    
T  26093586 aatcttcttaactctcatccttctgttttgggt 26093618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 208
Target Start/End: Complemental strand, 26190455 - 26190265
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| ||||||||||||||||| |||| ||  |||| ||||| ||||| |||||||  | ||| | |||| || |||||| |||| ||||  | ||||    
T  26190455 aatccggaaacttcaaaaaatagggtgcgttacatgatgttttcggattacataattcagaaaccccctaaacacccttttttaaggtaaaat-agttcg 26190357  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactct 208  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||| || | ||||||| ||| ||| ||||| |||||||||||    
T  26190356 gattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggataattttaatattcctaactct 26190265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 188 - 315
Target Start/End: Complemental strand, 26898790 - 26898663
Alignment:
Q  188 aatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccga 287  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||  ||||||  | ||||||||| ||||  |||||    
T  26898790 aatattaatcttcctaactctcatccttctgttttgagtcattgttatatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctccga 26898691  T
Q  288 aacttccccagaaaatcagaaaatattc 315  Q
    ||||| |||| |||||||||||| ||||    
T  26898690 aacttgcccaaaaaatcagaaaaaattc 26898663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 25747077 - 25747168
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatc 197  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| || |||||||    
T  25747077 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaacattaatc 25747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 1350391 - 1350290
Alignment:
Q  94 tttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatt 193  Q
    |||||||||||||||||| ||||||||||||||| | |||| ||||| |||||||||||||||||||||||||||| ||   ||||||||||| ||||||    
T  1350391 tttttcaagggaaaaacagttcggattatataattcaaactatatcaacacaaattctaaacatgtttgtaacatggataaccattttatggataatatt 1350292  T
Q  194 aa 195  Q
    ||    
T  1350291 aa 1350290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 53 - 305
Target Start/End: Original strand, 18514801 - 18515053
Alignment:
Q  53 attttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattcta 152  Q
    |||||||| ||||||| |||| || |||| | |||| || ||| |||| |||||||||| ||| |||||||||||| |||| | |||| |||||||||||    
T  18514801 attttttcggattatagaatttgatcaccccctaaacacccttattcaggggaaaaacagttcagattatataatctgaaccgcatcatcacaaattcta 18514900  T
Q  153 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaa 252  Q
    |  |||||||||||||  ||   || |||  |||  |||| |||||||||||||| |||||||| |||||  ||||||||||   ||| | | |||||||    
T  18514901 agtatgtttgtaacatagataaccagttttaggaccatatcaatcttcctaactcacatccttcagttttacgtcattgttagcggttttcagtcaaaaa 18515000  T
Q  253 tcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    || ||||||| || |||||||||| |||  |||||||  | ||||||||||||    
T  18515001 tccggttttcgagctacttgatcaaattgctccgaaaacttcccagaaaatca 18515053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 8739047 - 8738947
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||| ||||||| ||||| |||| ||| |||||| ||||||||||||||||| || ||||||||| | | |||||||||||||||||||||||||    
T  8739047 ttcggattacataatccaaactgcatcaacaccaattctgaacatgtttgtaacatggatagtcattttaagaacaatattaatcttcctaactctcatc 8738948  T
Q  213 c 213  Q
    |    
T  8738947 c 8738947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 215
Target Start/End: Complemental strand, 8739350 - 8739148
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgatttttt-ctgattatataattcgaacacctcataaatactctttttcaagggaa---aaacac 112  Q
    ||||||||||| |||||||||||| || ||||||||||||||| | | ||||| ||| |||||||| | |||| || ||||||  | ||     |  ||     
T  8739350 aatccgaaaacctcaaaaaatagggtgtgctatttgatttttttcggtttatagaatacgaacaccccctaaacacccttttttcatggtgctgatgcaa 8739251  T
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||  |||||| ||||| | |||||| |||||| |||||||||||||||||  | ||||||||| ||| |||||||||||||||||||||||||    
T  8739250 ttcggattacgtaatccaaactgcaccagcaccaattctgaacatgtttgtaacatgggtagtcattttaaggacaatattaatcttcctaactctcatc 8739151  T
Q  213 ctt 215  Q
    |||    
T  8739150 ctt 8739148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 16429341 - 16429450
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||  |||||| ||||  |||||||| |||||| |||||||||||||||||||| ||| ||||| ||| |||||||||||||| |||||| |||    
T  16429341 ttcggattacctaatccaaactacatcagcaccaattctgaacatgtttgtaacatgaatagtcgttttaaggacaatattaatcttccaaactcttatc 16429440  T
Q  213 cttctgtttt 222  Q
    ||| ||||||    
T  16429441 cttgtgtttt 16429450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 308
Target Start/End: Original strand, 26622172 - 26622364
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||||||||| |||||||||||||||||||||   ||  |||||||||||| | |   ||  ||| |||  ||||||| |||||||||| |||||    
T  26622172 ttcggattatataattcgaactgtatcagcacaaatttcgaatttgtttgtaacat-agtaaccagattaaggaccatattaaacttcctaactttcatc 26622270  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 308  Q
    ||||| |||| ||| |||||||  ||||  || ||||||||| |||||||    ||||||||||||||  |||||||||||| |||||||||||||    
T  26622271 cttctattttaggttattgttagttgtt--tagtcaaaaatccggttttcggactacttgatcagattgctccgaaacttcctcagaaaatcagaa 26622364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 41639563 - 41639385
Alignment:
Q  105 aaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaa 204  Q
    ||||||| || |||||||||||||||||||||||||||||||||||| |   ||||||||||||  ||   || ||||  || ||||||||| | |||||    
T  41639563 aaaaacagtttggattatataatccgaactgtatcagcacaaattctgagtctgtttgtaacatagataaccagtttaatgacaatattaatttccctaa 41639464  T
Q  205 ctctcatccttctgttttgggtcattgttacatgttcttact---caaaaatcaggttttcaagatacttgatcagatt 280  Q
    |||||||| || |||||| |||||||||||  |||||||| |    ||||||| | |||||| | ||||||||||||||    
T  41639463 ctctcatctttttgttttaggtcattgttagttgttcttagtaaaaaaaaatctgattttcaggctacttgatcagatt 41639385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 41253341 - 41253480
Alignment:
Q  95 ttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatta 194  Q
    |||| |||| ||||| | ||||||||||||||| ||||||||| |||||| |||| | ||| ||||||||||||||||    | |||| | |  ||||||    
T  41253341 tttttaaggaaaaaataattcggattatataattcgaactgtaccagcaccaattatgaacttgtttgtaacatgaataacgaatttaagtaccatatta 41253440  T
Q  195 atcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    |||||||||||| ||||||| ||||||| |||||||||||    
T  41253441 atcttcctaactatcatcctcctgttttaggtcattgtta 41253480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 222
Target Start/End: Complemental strand, 28445247 - 28445162
Alignment:
Q  137 atcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||| ||| |||||| ||||||||||||||||| || ||| ||||| ||| |||||||||||||||||||||||||||| ||||||    
T  28445247 atcaacaccaattctgaacatgtttgtaacatgtatggtcgttttaaggacaatattaatcttcctaactctcatccttgtgtttt 28445162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 21070429 - 21070525
Alignment:
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcc 213  Q
    ||||||||||||| ||||| ||||| ||||||||| ||||| ||||||||||  || ||||||||| ||| ||||||||||||| |||| |||||||    
T  21070429 gattatataatccaaactgaatcagtacaaattctgaacatatttgtaacatagatagtcattttaaggacaatattaatcttcataaccctcatcc 21070525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 27494312 - 27494106
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatac-tctttttcaag--ggaaaaacact 113  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||  ||||||| ||| ||||||||   |||| || | ||||||| |  |   |  || |    
T  27494312 aatccgaaaacctcaaaaaataggacgcgctatttgatatttttagattatagaatccgaacaccc--taaacacctttttttcatgatgctgatgcagt 27494215  T
Q  114 tcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcc 213  Q
    ||||||||  | |||| ||||| | |||||| |||||||||||| ||||||||||| || ||||||||| ||| |||||||||||||||||| | | |||    
T  27494214 tcggattacgtgatccaaactgcaccagcaccaattctaaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaacccccgtcc 27494115  T
Q  214 ttctgtttt 222  Q
    || ||||||    
T  27494114 ttgtgtttt 27494106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 8973653 - 8973562
Alignment:
Q  131 aactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    ||||||| | |||| |||| | ||||||||||||||||| ||  |||||||| ||| |||||||| ||||||||||||||||||| ||||||    
T  8973653 aactgtacccgcaccaattttgaacatgtttgtaacatggataatcattttaaggacaatattaaccttcctaactctcatccttgtgtttt 8973562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 308
Target Start/End: Original strand, 33901094 - 33901213
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 288  Q
    |||||||||||||||||||  |||||||| |||| |||||||||||  |||| ||| ||||||||  | ||||||   || |||||||||||  ||||||    
T  33901094 atattaatcttcctaactcatatccttctcttttaggtcattgttagttgtttttagtcaaaaatttgattttcagactatttgatcagattgctccgaa 33901193  T
Q  289 acttccccagaaaatcagaa 308  Q
    |||||||  |||||||||||    
T  33901194 acttccctcgaaaatcagaa 33901213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 34530300 - 34530383
Alignment:
Q  139 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||| |||||| |||||||||||||||||  | ||||||||| ||| ||||||||||||||||||| ||||| || ||||||    
T  34530300 cagcactaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttcctaactttcatcattgtgtttt 34530383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 215
Target Start/End: Original strand, 16429131 - 16429233
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||  |||||| ||| | | || ||| |||||||||||||||||||||||| || |||||||||  || |||| |||||||| |||||||||||    
T  16429131 ttcggattacgtaatccaaacagcaccaacaccaattctaaacatgtttgtaacatggatagtcattttaatgataatactaatcttcataactctcatc 16429230  T
Q  213 ctt 215  Q
    |||    
T  16429231 ctt 16429233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 4028056 - 4027980
Alignment:
Q  97 ttcaagggaaaaacacttcggattatat-aatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaat 172  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||||||||||| |||   ||||||||| ||||||    
T  4028056 ttcaagggaaaaacagttcggattatataaatccgaattgtatcagcacaaattataagtttgtttgtaatatgaat 4027980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 28445441 - 28445358
Alignment:
Q  139 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||| |||||| ||||||||||||||||| || ||||||||| ||| ||||||||||||  || || |||||||| ||||||    
T  28445441 cagcacgaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatctttgtagctttcatccttgtgtttt 28445358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 38641026 - 38641102
Alignment:
Q  146 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||| ||||||||||||||||  || ||||||||| ||| ||||||||||||||||  | |||||||| ||||||    
T  38641026 aattctgaacatgtttgtaacatagatagtcattttaaggacaatattaatcttcctagttttcatccttgtgtttt 38641102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 9439575 - 9439480
Alignment:
Q  54 ttttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaatt 149  Q
    ||||||| ||||||| |||||||||||| | |||| |  ||| ||||||||||||||| |||  ||||| ||||| ||| |||||||| |||||||    
T  9439575 ttttttcggattatagaattcgaacaccccttaaacatccttattcaagggaaaaacaattcaaattatgtaatctgaattgtatcagaacaaatt 9439480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 27493993 - 27493902
Alignment:
Q  131 aactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    ||||| |||||||  |||| || |||||||||||||||| || |||||||||   | ||||||||||||||||||  |||||||| ||||||    
T  27493993 aactgcatcagcatcaattatatacatgtttgtaacatggatagtcattttaaaaacaatattaatcttcctaacattcatccttgtgtttt 27493902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 253
Target Start/End: Original strand, 3435321 - 3435454
Alignment:
Q  120 tatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgt 219  Q
    ||||||||||||||| ||| |||| ||||| ||||| ||||||||||||| ||   || ||||  |||  | ||||| ||  ||||| |||||||| |||    
T  3435321 tatataatccgaactatattagcataaattttaaacctgtttgtaacatggataaacaatttaaagagcttgttaattttgttaactttcatccttatgt 3435420  T
Q  220 tttgggtcattgttacatgttcttactcaaaaat 253  Q
    ||| ||||||||||| ||||| | | ||||||||    
T  3435421 tttaggtcattgttagatgttttcaatcaaaaat 3435454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 8032269 - 8032328
Alignment:
Q  51 tgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaac 110  Q
    |||||||| | ||||| ||||| |||||||||| |||| || ||||||||||||||||||    
T  8032269 tgatttttccggattacataatccgaacacctcctaaacaccctttttcaagggaaaaac 8032328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 14001684 - 14001778
Alignment:
Q  54 ttttttctgattatataattcgaacacctcataaatactcttttt-caagggaaaaacacttcggattatataatccgaactgtatcagcacaaa 147  Q
    ||||||| ||||||| ||| |||||||| | |||  ||  ||||| || ||| |||||| ||| |||||||||||||||||||||| ||||||||    
T  14001684 ttttttcggattataaaatccgaacaccacctaagcaccgtttttgcagggggaaaacagttcagattatataatccgaactgtattagcacaaa 14001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 305
Target Start/End: Original strand, 31561646 - 31561695
Alignment:
Q  256 ggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    |||||||| | ||||||||||||||  |||||||||| ||||||||||||    
T  31561646 ggttttcatgctacttgatcagattactccgaaactttcccagaaaatca 31561695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 34530117 - 34530201
Alignment:
Q  137 atcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||||| |||| |  ||||||||||| | || || ||||||||| ||| | ||||||||||||||||| |||||||| ||||||    
T  34530117 atcagcaccaattttggacatgtttgtagc-tggatagtcattttaaggacagtattaatcttcctaactttcatccttgtgtttt 34530201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 26093620 - 26093712
Alignment:
Q  218 gttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    |||||||||||||||||  |||||||| ||||||||   ||||||| | || |||| ||||||    |||||||||| || ||||||||||||    
T  26093620 gttttgggtcattgttagttgttcttagtcaaaaattgagttttcaggctatttgaacagattgcctcgaaacttcctcacaaaatcagaaaa 26093712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 38640818 - 38640894
Alignment:
Q  146 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||| ||||||||| ||||||| || |||| |||| ||| ||||||||||||| || || || ||||| ||||||    
T  38640818 aattctgaacatgtttataacatggatagtcaatttaaggacaatattaatcttcatagctttcgtccttgtgtttt 38640894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 8e-74; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 17 - 310
Target Start/End: Original strand, 5507418 - 5507713
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttct--gattatataattcgaacacctcataaatactctttttcaagggaaaaacactt 114  Q
    ||||| |||||||||||||||| || ||| ||  ||||||||| |  ||||||||||| |||||||| | |||| ||  ||| | |||| ||||| | ||    
T  5507418 aatccaaaaacttcaaaaaataagacgcgttacatgattttttttcggattatataatccgaacaccccctaaacaccttttcttaaggaaaaaatagtt 5507517  T
Q  115 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||  | |||||||||||||  ||||||||| ||    
T  5507518 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttataaacaatattaatcttcacaactctcattct 5507617  T
Q  215 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||  |  |||||||| ||||  ||||||||||||||||||||||||||||    
T  5507618 tctgttttgggtcattgctacctgttcttagtcaaaaatcaggttttcgggcaacttgatcggattgctccgaaacttccccagaaaatcagaaaa 5507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 106 - 315
Target Start/End: Complemental strand, 32187933 - 32187724
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||||||||| ||| ||||||||||||||||||    
T  32187933 aaaacagttcggattatataatccgaactgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 32187834  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||| |||||||    ||||||||| ||||  |||||||||||||||||||||||    
T  32187833 tctcatccttctgttttgggtcattgttacctgttcttggtcaaaaatcgggttttcggactacttgatcggattgctccgaaacttccccagaaaatca 32187734  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  32187733 gaaaaaattc 32187724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 62 - 315
Target Start/End: Complemental strand, 41203294 - 41203041
Alignment:
Q  62 gattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgttt 161  Q
    ||||| ||||| |||||||| | |||| || |||||| ||| |||||||| ||| |||||||||| |||||||||||||||||||||| |||||||||||    
T  41203294 gattacataatccgaacaccccgtaaacaccctttttaaagagaaaaacagttcagattatataaaccgaactgtatcagcacaaattttaaacatgttt 41203195  T
Q  162 gtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggtttt 261  Q
    |||||||| || ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | ||||||  | ||||    
T  41203194 gtaacatggatagtcattttatggacaatattaatcttcctaactttcatccttctgttttgggtcattgttacctgttcttagttaaaaattggatttt 41203095  T
Q  262 caagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |  |  |||||||| ||||  ||||||||||||||||||||| |||||| ||||    
T  41203094 cgggcaacttgatcggattgctccgaaacttccccagaaaattagaaaaaattc 41203041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 17 - 310
Target Start/End: Original strand, 39447164 - 39447456
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||||||||||||||||  ||  ||  |||| ||||| ||||| |||||  | | ||| |||||| || ||||||||||| ||||  | ||||    
T  39447164 aatccgaaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatctggaaaccccataaacaccctttttcaaggtaaaat-agttcg 39447262  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| || |||||||||  || |||||||||||||||||||||||||||||    
T  39447263 gattatataattcaaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactctcatccttc 39447362  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    | |||||||||||||||||||||||||| ||||||||| ||| |||    | ||||||| ||||  || |||||||||| ||||||||||||||    
T  39447363 tattttgggtcattgttacatgttcttagtcaaaaatcgggtcttccgactgcttgatcggattgctctgaaacttccctagaaaatcagaaaa 39447456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 42894379 - 42894676
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||| ||||||||||| ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| ||  |||||||||| |||| || | ||    
T  42894379 aatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaa-cagtccg 42894477  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||  |||||||| ||| |||||||||||||||||||||| ||||||    
T  42894478 gattatatattccgaactgtatcagcacaaattctaaacatgtttctaacatggataatcattttagggacaatattaatcttcctaactctcttccttc 42894577  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||||||||||||||||||||||||  ||||||||  ||||||    ||||||||| ||||  ||||||||||||||||||||| |||||| ||||    
T  42894578 tgttttgggtcattgttacatgttcttaggcaaaaatcgagttttcggactacttgatcggattactccgaaacttccccagaaaattagaaaaaattc 42894676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 106 - 315
Target Start/End: Complemental strand, 15995177 - 15994968
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||| |||||||||||| |||||    
T  15995177 aaaacagttcggattatataattcgaactgtatcagcaaaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatctttctaac 15995078  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    ||||||| ||||||||||||||||||||||||||||||| | ||||||  | ||||||   || |||||| ||||  ||||||||||||||| |||||||    
T  15995077 tctcatcattctgttttgggtcattgttacatgttcttagtaaaaaattggattttcagactatttgatcggattgctccgaaacttccccataaaatca 15994978  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  15994977 gaaaaaattc 15994968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 17 - 274
Target Start/End: Original strand, 8388650 - 8388909
Alignment:
Q  17 aatccgaaaacttcaaaaaatag--gatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacactt 114  Q
    |||||||||| |||||||||||   | ||||||| |||||| |||  ||||||||||| | |||||| | |||| ||||||||| |||| ||||||| ||    
T  8388650 aatccgaaaatttcaaaaaatatatggtgcgctacttgattgttttggattatataatcctaacaccccttaaacactcttttttaaggaaaaaacagtt 8388749  T
Q  115 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 214  Q
    | ||||||||| |||||| ||||||||||||||||||||| |||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||||||    
T  8388750 cagattatatagtccgaaatgtatcagcacaaattctaaagatgtttgtaacatggattgccatcttatggacaatattaatcttcctaactctcatcct 8388849  T
Q  215 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgat 274  Q
    || ||||||||||||||||   |||||||| || |||||| ||||||| || ||||||||    
T  8388850 tcagttttgggtcattgttggctgttcttagtctaaaatcgggttttcgagctacttgat 8388909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 94 - 310
Target Start/End: Original strand, 34517179 - 34517395
Alignment:
Q  94 tttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatt 193  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||  |||||||| || ||||||||||| | ||||||    
T  34517179 tttttcaagggaaaaacagtttggattatataatccgaactgtatcagcacaaattctaaacatgtcggtaacatggatagtcattttatgaacaatatt 34517278  T
Q  194 aatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttc 293  Q
    |||| || ||||| |||||||| ||||||||||||||||||| |||||||| ||||||||  |||||||   |||||||||| ||||  ||||||||||     
T  34517279 aatcatcataactttcatccttttgttttgggtcattgttacctgttcttagtcaaaaattgggttttcggaatacttgatcggattgctccgaaactta 34517378  T
Q  294 cccagaaaatcagaaaa 310  Q
    |||||||| ||||||||    
T  34517379 cccagaaagtcagaaaa 34517395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 106 - 315
Target Start/End: Complemental strand, 41510492 - 41510284
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||||||| ||| ||||||||||||||||||    
T  41510492 aaaacagtccggattatataatctgaactgtatcagcacaatttctaaacatgtttgtaacatga-tagtcattttagggacaatattaatcttcctaac 41510394  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    |||||||||||||||||||||||||||||| |||||||| | |||||   |||||||  | ||||||||| ||||  ||||||||||||| |||||||||    
T  41510393 tctcatccttctgttttgggtcattgttacttgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttccctagaaaatca 41510294  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  41510293 gaaaaaattc 41510284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 44465803 - 44465635
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||| ||| |||||    
T  44465803 ctttttcaaggtaaaa-cagttcggattatataatccgaaatgtatcagcacaaattctaaacatgtttgtaacatggttagtcattttagggacaatat 44465705  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 262  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||    
T  44465704 taatcttcctaactctcatccttctgttttgggtcattgttacctcttcttagtcaaaaatcaggttttc 44465635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 93 - 310
Target Start/End: Complemental strand, 33452519 - 33452303
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||||||| ||| |||||    
T  33452519 ctttttcaaggtaaaa-cagttcggattatataatccgaactgtattagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatat 33452421  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaaga-tacttgatcagattcttccgaaact 291  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||  |||||||| ||||||||| ||||| |  || ||||||||| ||||  |||||||||    
T  33452420 taatcttcctaactctcattcttttgttttgggtctttgttatctgttcttagtcaaaaatcgggttt-ctggactacttgatcggattgctccgaaact 33452322  T
Q  292 tccccagaaaatcagaaaa 310  Q
    | |||||||||||||||||    
T  33452321 ttcccagaaaatcagaaaa 33452303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 50 - 306
Target Start/End: Complemental strand, 19110134 - 19109879
Alignment:
Q  50 ttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaatt 149  Q
    ||||||||||||||||||| |||  || |||| | |||| || |||||||||||||||||   |||| |||||||||||| |||| ||||||||||||||    
T  19110134 ttgattttttctgattatagaatctgatcaccccctaaacaccctttttcaagggaaaaattgttcg-attatataatccaaactatatcagcacaaatt 19110036  T
Q  150 ctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaa 249  Q
     |||| || ||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||||  |||||||| ||||    
T  19110035 ttaaatatctttgtaacatggatcgtcattttaaggataatattaatcttcctaactctcatccttttattttgggtcattgttagctgttcttagtcaa 19109936  T
Q  250 aaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 306  Q
    |||||  |||||     ||||||||| ||||  ||||||||||| ||||||| ||||    
T  19109935 aaatccagtttttggactacttgatcggattgctccgaaacttcaccagaaattcag 19109879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 36874987 - 36875232
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||| ||| ||  |||| ||| | ||||| ||||| || | |||   | || ||  |||||||||| |||| || | ||    
T  36874987 aatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccctctgaacaccatttttcaaggtaaaa-cagtccg 36875085  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||| |||||||| |||| |||||||||||| |||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||    
T  36875086 gattatataatccaaactgtattagcataaattctaaacaagtttgtaacatggatagtcattttagggataatattaatcttcctaactctcatccttc 36875185  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttca 263  Q
    |||||||||||||||||||  |||||||  |||||||| ||||||||    
T  36875186 tgttttgggtcattgttacccgttcttaggcaaaaatcgggttttca 36875232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 41855051 - 41854764
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| ||||||||||||||||| || | ||  |||| ||| | ||||| || || || | ||| | |||| || ||||||||||| |||| || ||||    
T  41855051 aatccggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacatgatccggaaaccccctaaacaccctttttcaaggtaaaa-cagttcg 41854953  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||     || ||||||| | ||| |||||||||||||||||||||||||||||    
T  41854952 gattatataatttgaactgtatcagcacaaattctaaacatgtttgtaa-----atagtcatttcagggacaatattaatcttcctaactctcatccttc 41854858  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    ||||||| ||||||||||  |||||||| | ||||| | | ||||   | ||||||||| ||||  || |||||||||||||||||||||||||    
T  41854857 tgttttgagtcattgttatctgttcttagttaaaaaccggatttttgggctacttgatcggattgctctgaaacttccccagaaaatcagaaaa 41854764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 45153936 - 45153708
Alignment:
Q  24 aaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattata 123  Q
    |||||||||||||||||  ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| || ||||||||||| |||| || ||  |||||||    
T  45153936 aaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa-cagtttagattata 45153838  T
Q  124 taatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttg 223  Q
    ||||  ||||||||||||||||| || ||||||||||||||||||| || ||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  45153837 taatttgaactgtatcagcacaagttataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcttaactctcatccttctgttttg 45153738  T
Q  224 ggtcattgttacatgttcttactcaaaaat 253  Q
    |||||||||||| |||||||| || |||||    
T  45153737 ggtcattgttacctgttcttagtccaaaat 45153708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 113 - 315
Target Start/End: Complemental strand, 16750484 - 16750284
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||||||||| ||||||||||||||| |||||||||  |||||||||| ||| || ||||||||| | | ||||||||||||| |||||||||||    
T  16750484 ttcggattatataattcgaactgtatcagcataaattctaat-atgtttgtaatatggatagtcattttaggaacaatattaatcttc-taactctcatc 16750387  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||||||||||||||||||||||  |||||||| | ||||||| | |||||    ||||||||| |||| | |||||||||||||||| |||||||||| |    
T  16750386 cttctgttttgggtcattgttatctgttcttagtaaaaaatcggattttcggactacttgatcggattgtaccgaaacttccccagacaatcagaaaaaa 16750287  T
Q  313 ttc 315  Q
    |||    
T  16750286 ttc 16750284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 17 - 263
Target Start/End: Complemental strand, 17474951 - 17474706
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||| ||||||||||  ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| ||  |||||||||| |||| || || |    
T  17474951 aatccggaaactttaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacaatttttcaaggtaaaa-cagtttg 17474853  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||  || ||||||||||||||||||||||||  |||    
T  17474852 gattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaactctcataattc 17474753  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttca 263  Q
    |||| || | ||||||||| |||||||  ||||||||| ||||||||    
T  17474752 tgttatgcggcattgttacctgttcttcgtcaaaaatcgggttttca 17474706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 121 - 315
Target Start/End: Complemental strand, 25217825 - 25217629
Alignment:
Q  121 atataatccg-aactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctg- 218  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| |||| || ||||||||  ||| ||| |||||||||||||||||| ||||||||     
T  25217825 atataatccggaactgtattagcacaaattctaaacatgtttgtagcatggatagtcattttggggacaattttaatcttcctaactctcttccttctgt 25217726  T
Q  219 ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||||||||||||| |||||||| | ||||||| |||||||  | ||||||||| ||||  ||||| ||||| | |||||||||||||| ||||    
T  25217725 ttttgggtcattgttacctgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctccgacacttctctagaaaatcagaaaaaattc 25217629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 310
Target Start/End: Original strand, 30763660 - 30763943
Alignment:
Q  32 aaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccga 131  Q
    |||||||||| ||| |  ||||||||||  ||||||||||| |||||||| | |||| ||  ||||||||  |||||||| ||| ||||||||| ||| |    
T  30763660 aaaaataggacgcgttcgttgatttttttggattatataatccgaacacc-cttaaacaccatttttcaaaagaaaaacagttctgattatatattccaa 30763758  T
Q  132 actgtatcagcacaaattctaaacatgtttg----taaca--tgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttggg 225  Q
    | ||||||| || ||||||||||||| ||||    |||||  |  || ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||    
T  30763759 attgtatcaacataaattctaaacatttttggtgttaacacatagatagtcattttatggacaatattaatcttcctaactctcatctttctgtttttgg 30763858  T
Q  226 tcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    |||||||||  |||||||| ||||||||| | ||||   |  |||||||| ||||  |||||||||||| |||||||||||||||    
T  30763859 tcattgttagctgttcttagtcaaaaatctgatttttgggcaacttgatcggattgctccgaaacttcctcagaaaatcagaaaa 30763943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 116 - 262
Target Start/End: Complemental strand, 36948999 - 36948853
Alignment:
Q  116 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 215  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||| ||||||| || |  |||||| ||| ||||||||||||||||||||| ||||||    
T  36948999 ggattatataatccaaactgtatcagcacaaatcctaaacatatttataacatgtatagctattttagggacaatattaatcttcctaactcttatcctt 36948900  T
Q  216 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 262  Q
     |||||||||| |||||||| |||||||| ||||||||  |||||||    
T  36948899 ttgttttgggtaattgttacctgttcttagtcaaaaattgggttttc 36948853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 62 - 307
Target Start/End: Original strand, 35250977 - 35251221
Alignment:
Q  62 gattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgttt 161  Q
    ||||||| ||| |||||||| | |||| || ||| ||||||| ||||||| |||  |||||||||||| |||||||| |||||||||||| |   |||||    
T  35250977 gattatagaatccgaacaccgc-taaacacccttattcaaggaaaaaacaattcatattatataatccaaactgtattagcacaaattctgagtttgttt 35251075  T
Q  162 gtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggtttt 261  Q
    |||| ||| || | || |||| |||  |||||||||||| ||||||  |||||||| |||| |||||||||||  |||||||| || |||||| ||||||    
T  35251076 gtaatatggatagccagtttaaggaccatattaatcttcttaactcctatccttctattttaggtcattgttagttgttcttagtcgaaaatccggtttt 35251175  T
Q  262 caagatacttgatcagattcttccgaaacttccccagaaaatcaga 307  Q
    |  | ||||||||||||||  |||||||||| ||||||||||||||    
T  35251176 cgggctacttgatcagattgctccgaaactttcccagaaaatcaga 35251221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 38066825 - 38066633
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||||||||||||||||||||| || | ||| |||||||||| ||||| ||||  | |||||| |||||| || | ||||||||||||||||| |||     
T  38066825 aatccgaaaacttcaaaaaatagggtgtgttatatgattttttcggattacataacccaaacacc-cataaacaccccttttcaagggaaaaacagttca 38066727  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctca 210  Q
     ||||||||| |||||| |||| | ||||||||||||| |||||||||| ||| || ||||||||| ||| ||||||||||||| | |||||||    
T  38066726 tattatataaaccgaacagtattaacacaaattctaaatatgtttgtaaaatggatagtcattttaaggacaatattaatcttcattactctca 38066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 163 - 315
Target Start/End: Complemental strand, 38308840 - 38308687
Alignment:
Q  163 taacatgaattgtcattttatggagaatattaatcttccta--actctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttt 260  Q
    ||||||| |||||||||||||||| ||||||||||||| ||  ||| |||||||||||||||||||| ||||||| |||||||| ||||||||| || ||    
T  38308840 taacatggattgtcattttatggacaatattaatcttcttataactatcatccttctgttttgggtc-ttgttacctgttcttagtcaaaaatcgggatt 38308742  T
Q  261 tcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||  | ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  38308741 tcgggctacttgatcagattgctctgaaacttccccagaaaatcagaaaaaattc 38308687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 93 - 308
Target Start/End: Original strand, 26228143 - 26228358
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    |||||||| || ||||| | ||||| ||||||||| ||||||||||||||| | ||| | ||  ||||||| ||||| ||    | ||||  ||  ||||    
T  26228143 ctttttcagggaaaaaatagttcgggttatataattcgaactgtatcagcatacattatgaatctgtttgtgacatggataactagtttaatgaccatat 26228242  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    ||||||| ||||||||||||||| |||||| ||| |||||||  |||||||| |||||||||  |||||| || ||||||||||||||| ||||||||||    
T  26228243 taatcttgctaactctcatccttttgttttaggtaattgttagttgttcttagtcaaaaatctagttttcgagctacttgatcagattcgtccgaaactt 26228342  T
Q  293 ccccagaaaatcagaa 308  Q
    ||||| ||||||||||    
T  26228343 ccccataaaatcagaa 26228358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 133 - 306
Target Start/End: Complemental strand, 33440546 - 33440374
Alignment:
Q  133 ctgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgt 232  Q
    |||||||| |||||||||| ||||||||||| |||||||   |||||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  33440546 ctgtatcaacacaaattctgaacatgtttgttacatgaaaattcattttaaggataatattaatctttctaac-ctcatccttctgttttgggtcattgt 33440448  T
Q  233 tacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcag 306  Q
    |   ||||| |  | ||||||  |||| |||   ||||||| ||| ||  ||||||||||||||||||||||||    
T  33440447 tcactgttcatggtaaaaaatacggttatcagactacttgaccaggttgctccgaaacttccccagaaaatcag 33440374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 41204013 - 41204138
Alignment:
Q  97 ttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaat 196  Q
    |||| |||||| ||| ||||||| |||||||| ||||||||||| |||||||||| |||||||||||||| |||||  | |||||| ||   ||||||||    
T  41204013 ttcaggggaaagacagttcggataatataatctgaactgtatcaacacaaattctgaacatgtttgtaacttgaatattgattttaagggttatattaat 41204112  T
Q  197 cttcctaactctcatccttctgtttt 222  Q
     |||||||||| |||| |||||||||    
T  41204113 tttcctaactcccatcattctgtttt 41204138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 45293813 - 45293930
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 288  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||  |||||||| ||||||||| |||||||  | |||||||||| |||  || |||    
T  45293813 atattaatcttcctaactctcatctttctgttttaggtcattgctagttgttcttagtcaaaaatccggttttcgggctacttgatcatattgctctgaa 45293912  T
Q  289 acttccccagaaaatcag 306  Q
    |||| |||| ||||||||    
T  45293913 actttcccataaaatcag 45293930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 104 - 310
Target Start/End: Original strand, 42478831 - 42479037
Alignment:
Q  104 gaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttccta 203  Q
    |||||||| ||||  |||||||||| ||| |||||||||||||||| | |   | ||||||| ||  ||   || |||| |||  |||||||||||||||    
T  42478831 gaaaaacagttcgagttatataatctgaaatgtatcagcacaaattttgagtttatttgtaatatagataaccagtttaaggaccatattaatcttccta 42478930  T
Q  204 actctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 303  Q
    |||||||||||| |||||| |||||||||||   ||||| | ||||||||   ||||||  | ||||||||||||||  || |||||||||||| |||||    
T  42478931 actctcatccttatgttttaggtcattgttagccgttctcagtcaaaaattcagttttcgggctacttgatcagattgctctgaaacttccccaaaaaat 42479030  T
Q  304 cagaaaa 310  Q
    || ||||    
T  42479031 cataaaa 42479037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 17766886 - 17766777
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||| ||||||  ||||  |||| ||| |||| | ||||||||||||||||  || ||||||||| ||| |||||||||||||||||||||||||    
T  17766886 ttcggattacataatctaaacttcatcaacaccaattttgaacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactctcatc 17766787  T
Q  213 cttctgtttt 222  Q
    ||| ||||||    
T  17766786 cttgtgtttt 17766777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 315
Target Start/End: Complemental strand, 38065543 - 38065432
Alignment:
Q  204 actctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 303  Q
    |||||||| |||||||||||||| |||||||| |||||||| | |||||| || |||||| | || |||||| ||||  |||||||||| |||| |||||    
T  38065543 actctcattcttctgttttgggttattgttacctgttcttagtaaaaaattagattttcaggctatttgatcggattgctccgaaactttcccataaaat 38065444  T
Q  304 cagaaaatattc 315  Q
    ||||||| ||||    
T  38065443 cagaaaaaattc 38065432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 310
Target Start/End: Complemental strand, 32069286 - 32069099
Alignment:
Q  122 tataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttt 221  Q
    ||||||| | ||||||||| || ||||||| |   |||||||| |||| || | || |||| |||  |||||| |||||||| ||||||| ||| |||||    
T  32069286 tataatctgcactgtatcaacataaattctgagtctgtttgtatcatggatagccaatttaaggaccatattagtcttcctagctctcatacttatgttt 32069187  T
Q  222 tgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    | |||||||| || ||||||| |||||||||||  ||||||| | ||||| ||||||||  || ||||||| |||| ||||| ||||||    
T  32069186 taggtcattgatagatgttctcactcaaaaatcttgttttcaggctacttaatcagattgctctgaaactttccca-aaaattagaaaa 32069099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 34519561 - 34519485
Alignment:
Q  146 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||| ||||||||||||||||| ||  |||||||| ||| ||||||||||||||||||| |||||||| ||||||    
T  34519561 aattctgaacatgtttgtaacatggataatcattttaaggacaatattaatcttcctaactttcatccttatgtttt 34519485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 38308946 - 38308882
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacc 81  Q
    ||||||||||||||||||||||||  |||||||||||||||| | ||||||||||| ||||||||    
T  38308946 aatccgaaaacttcaaaaaatagggcgcgctatttgatttttccggattatataatccgaacacc 38308882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 34817215 - 34817326
Alignment:
Q  130 gaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcat 229  Q
    ||||||||||||||| |||||| ||| ||||||||||||| ||   || | || |||  |||||||||||||||||| |||||||  |||||| ||||||    
T  34817215 gaactgtatcagcaccaattctgaacttgtttgtaacatggataaccaatgtaaggaccatattaatcttcctaactatcatcctcatgttttaggtcat 34817314  T
Q  230 tgttacatgttc 241  Q
    ||||| ||||||    
T  34817315 tgttagatgttc 34817326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 9847236 - 9847160
Alignment:
Q  146 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||| ||||||||||||||||  || ||||||||| ||| ||||||||||||| ||||| |||||||| ||||||    
T  9847236 aattctgaacatgtttgtaacattgatagtcattttaaggacaatattaatcttcataactttcatccttgtgtttt 9847160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 17132768 - 17132846
Alignment:
Q  55 tttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaac 133  Q
    |||||| ||||||| ||| || | ||| | ||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  17132768 tttttcggattatagaatccgtaaaccacctaaatactcttattcaggggaaaaacaattcggattatataatccgaac 17132846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 27900748 - 27900674
Alignment:
Q  54 ttttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatc 128  Q
    ||||||| ||||||| |||||||||||| | |||| || ||| |||| |||||||||| ||||||||||||||||    
T  27900748 ttttttcggattataaaattcgaacaccccctaaacacccttcttcaggggaaaaacagttcggattatataatc 27900674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 37773829 - 37773735
Alignment:
Q  157 tgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaa 251  Q
    ||||||||||||| || | || |||| |||  || |||||||| |||||||||||||||||||||| | |||||||||  |||||||| ||||||    
T  37773829 tgtttgtaacatggatagccagtttaaggactatgttaatctttctaactctcatccttctgttttagttcattgttagttgttcttagtcaaaa 37773735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 33833842 - 33833969
Alignment:
Q  103 ggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcct 202  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||| | | |||||   || |||| || | ||  ||| |||  |||||||| || ||    
T  33833842 ggaaaaacagttcagattatataatccgaactgtatcatcacaaattatgagcatgt---tagcatggatagccagattaaggaccatattaatgtttct 33833938  T
Q  203 aactctcatccttctgttttgggtcattgtta 234  Q
    ||||| |||||||||||||| |||||||||||    
T  33833939 aactc-catccttctgttttaggtcattgtta 33833969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 9693427 - 9693562
Alignment:
Q  97 ttcaagggaaaaacacttcggattatataatccgaactgtatc--agcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatta 194  Q
    ||||||| ||||||| ||||||||||||||| |||| | |||   |||||||||| | | |||||||| |||||| || |  | |||| | |  ||||||    
T  9693427 ttcaaggaaaaaacagttcggattatataattcgaattatatattagcacaaattttgagcatgtttgcaacatggatggctagtttaagtatcatatta 9693526  T
Q  195 atcttcctaactctcatccttctgttttgggtcatt 230  Q
    |||||  ||||||||||||||||||||| |||||||    
T  9693527 atctttttaactctcatccttctgttttaggtcatt 9693562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 9847444 - 9847368
Alignment:
Q  146 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||||||||| |||||||| |  || ||||||||| ||| ||||||||||||||||| | |||||||| ||||||    
T  9847444 aattctaaacatatttgtaacgtcgatagtcattttaaggacaatattaatcttcctaaatttcatccttgtgtttt 9847368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 12885497 - 12885447
Alignment:
Q  101 agggaaaaacacttcggattatataatccgaactgtatcagcacaaattct 151  Q
    ||||||||||| ||| |||||||||||| ||| ||||||||||||||||||    
T  12885497 agggaaaaacagttcagattatataatctgaattgtatcagcacaaattct 12885447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 151
Target Start/End: Original strand, 45293743 - 45293776
Alignment:
Q  118 attatataatccgaactgtatcagcacaaattct 151  Q
    ||||||||||| ||||||||||||||||||||||    
T  45293743 attatataatctgaactgtatcagcacaaattct 45293776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 3e-73; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 34006261 - 34006560
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| ||| |||||||||||||  | ||||  |||||||| | ||||| |||||| ||||||| |||||| || ||||||||||||||||||| |||     
T  34006261 aatccggaaaattcaaaaaatagggcgggctacatgatttttccggattacataatttgaacaccccataaacaccctttttcaagggaaaaacagttca 34006360  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggag-aatattaatcttcctaactctcatcctt 215  Q
    ||||||||||||| || ||||| |||||||||| |||| |||||||||||||| || ||||||||| |||  ||||||||||||||||||||||||||||    
T  34006361 gattatataatccaaattgtattagcacaaattttaaagatgtttgtaacatggatagtcattttagggaacaatattaatcttcctaactctcatcctt 34006460  T
Q  216 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    || ||||| ||||||| ||| |||||||| |||||||| ||||||||  | ||||||||| ||||  |||||||||||||||||||||||||||| ||||    
T  34006461 ctattttgtgtcattgctacctgttcttagtcaaaaattaggttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattc 34006560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 125 - 315
Target Start/End: Complemental strand, 41584715 - 41584525
Alignment:
Q  125 aatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgg 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41584715 aatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgttttgg 41584616  T
Q  225 gtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||||||||||||||| ||||||||| |||||||  | ||||||||| ||||  |||||||||| ||||||||||||||||| ||||    
T  41584615 gtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttgcccagaaaatcagaaaaaattc 41584525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 106 - 315
Target Start/End: Original strand, 49677573 - 49677782
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||||||||||||    
T  49677573 aaaacagttcggattatataatccgaactgtatcagcataaattctaaccatgtttgtaacatagatagtcattttagggacaatattaatcttcctaac 49677672  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    |||||| ||| |||||||||||||||||||||||||||| | ||||||| ||||||||   ||||||||| ||||  |||||||||||||||||||||||    
T  49677673 tctcattcttatgttttgggtcattgttacatgttcttagttaaaaatcgggttttcagcctacttgatcggattgctccgaaacttccccagaaaatca 49677772  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  49677773 gaaaaaattc 49677782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 24472987 - 24472692
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttct--gattatataattcgaacacctcataaatactctttttcaagggaaaaacactt 114  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |  ||||||| ||| | |||| | | |||  || ||||||||||||||||||| ||    
T  24472987 aatccgaaaacttcaaaaaatagggtgcgctacttgattttttttcagattatagaatcctaacatcccttaatcaccctttttcaagggaaaaacaatt 24472888  T
Q  115 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 214  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| || ||||||||| ||| |||||||| |||||||||| |||| ||    
T  24472887 cggattatataatccgaactatattagcacaaattttaaacatgtttgtaacatggatagtcattttaaggaaaatattaagcttcctaactatcattct 24472788  T
Q  215 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    |||||||| |||||||||||  |||||||| |||||||||   |||    |  |||||||  ||||  ||||||||||||||||||||||||||||    
T  24472787 tctgtttttggtcattgttagctgttcttagtcaaaaatcgaatttgtgggcaacttgattggattgctccgaaacttccccagaaaatcagaaaa 24472692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 310
Target Start/End: Original strand, 42545969 - 42546262
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||| ||| ||  |||| ||| | ||| | || || |||| ||| | |||  || ||||||||||| |||| || ||||    
T  42545969 aatccggaaacttcaaaaaataggacgcgttacatgatgtttccggataacatgatccgaaaaccccctaagcaccctttttcaaggtaaaa-cagttcg 42546067  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||  || |||||||||| | ||||||||||||||||    
T  42546068 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagataatattaatcattctaactctcatccttc 42546167  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcagg-ttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    ||||||||||||||||||  |||||||| | ||||| | || |||||  | ||||||||| ||||  ||||||||||||||||||||||||||||    
T  42546168 tgttttgggtcattgttatctgttcttagttaaaaaccgggtttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaa 42546262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 113 - 315
Target Start/End: Complemental strand, 45046912 - 45046710
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| | ||| |||||||||||||||||||||||||    
T  45046912 ttcggattgtataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttcagggacaatattaatcttcctaactctcatc 45046813  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||||||||||||||||||||||| |||||||| | ||||| | |||||||  | ||||||||| ||||  |||||||||| |||| |||||||||||| |    
T  45046812 cttctgttttgggtcattgttacctgttcttagttaaaaaccgggttttcgggctacttgatcggattgctccgaaacttgcccaaaaaatcagaaaaaa 45046713  T
Q  313 ttc 315  Q
    |||    
T  45046712 ttc 45046710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 106 - 315
Target Start/End: Complemental strand, 52744912 - 52744703
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| || ||||||||| | | || |||||||||||||||    
T  52744912 aaaacaattcggattaaataatctgaactgtatcagcacaaatgctaaacatgtttgtaacatggatagtcattttaggaacaacattaatcttcctaac 52744813  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||    ||||||||| ||||  |||||||||||||||||||||||    
T  52744812 tctcatccttctgttttgggtcattgttacttgttcttagtcaaaaattgggttttcggactacttgatcggattgctccgaaacttccccagaaaatca 52744713  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  52744712 gaaaaaattc 52744703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 31 - 315
Target Start/End: Complemental strand, 28866774 - 28866490
Alignment:
Q  31 aaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccg 130  Q
    ||||||||||  ||||||  |||||||| | ||||| |||||  |||||||   |||| || |||||| |||||||||||| |||||||||||||||| |    
T  28866774 aaaaaatagggcgcgctacatgatttttccggattacataatctgaacacccgctaaacaccctttttaaagggaaaaacagttcggattatataatctg 28866675  T
Q  131 aactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcatt 230  Q
    ||||||||||||||||||| ||||||||||||||||||| || | ||||||||||| | | ||||||||| |||||||||||||||||||||||| ||||    
T  28866674 aactgtatcagcacaaattttaaacatgtttgtaacatggatagccattttatggacatttttaatcttcataactctcatccttctgttttgggacatt 28866575  T
Q  231 gttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||| |||||||| ||||||||| |  ||||    ||||||||| ||||  ||||||||||||||| ||||| |||||| ||||    
T  28866574 gttacctgttcttagtcaaaaatcggtatttcggactacttgatcggattgctccgaaacttccccaaaaaattagaaaaaattc 28866490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 113 - 315
Target Start/End: Original strand, 7011307 - 7011509
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || ||||||||| ||| ||||||||||||| |||||||||||    
T  7011307 ttcggattatataatccgaactgtatcagcaaaaattctaaacatgtttctaacatggatagtcattttagggacaatattaatcttcttaactctcatc 7011406  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    |||||||||| ||||||||| || |||| ||| ||||||||| |||||||  | ||||||||| ||||  |||||||| ||||||||||||||||||| |    
T  7011407 cttctgttttaggtcattgtaacctgtttttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacatccccagaaaatcagaaaaaa 7011506  T
Q  313 ttc 315  Q
    |||    
T  7011507 ttc 7011509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 315
Target Start/End: Complemental strand, 40908092 - 40907794
Alignment:
Q  16 caatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttc 115  Q
    ||||||| |||||||||||||| ||  | ||||  |||| ||||| ||||| ||||| |||| ||| | |||| || ||||||  | || |||||| |||    
T  40908092 caatccggaaacttcaaaaaattgggcgtgctacatgatgttttcggattacataatccgaaaaccccctaaacaccctttttttaaggtaaaacagttc 40907993  T
Q  116 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 215  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||| ||  ||||||||  || |||||||||||||||||||| |||| ||    
T  40907992 ggattatata-tctgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagagacaatattaatcttcctaactcccatcttt 40907894  T
Q  216 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||| |||||||||||||||| |||| ||| | ||||||| |||||||    ||||||||| ||||  |||||||||||||||||||||||||||| ||||    
T  40907893 ctgctttgggtcattgttacctgttgttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattc 40907794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 113 - 315
Target Start/End: Complemental strand, 33611472 - 33611270
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || | ||||||| ||| |||||| |||||||||| ||| |||    
T  33611472 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatatttatcttcctaaatcttatc 33611373  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||| ||||||||||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  || |||||||||||| |||||||||||| |    
T  33611372 cttttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaa 33611273  T
Q  313 ttc 315  Q
    |||    
T  33611272 ttc 33611270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 106 - 310
Target Start/End: Complemental strand, 15069910 - 15069707
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||  || |||||||||||| |||||    
T  15069910 aaaacagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttactaac 15069811  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    | ||||||||||||||||| |||||||||| |||||||| | ||||||| | ||||| || ||||||||| ||||  | |||||||| ||||||||||||    
T  15069810 tttcatccttctgttttggatcattgttacttgttcttagttaaaaatcggattttcgagctacttgatcggattgct-cgaaactttcccagaaaatca 15069712  T
Q  306 gaaaa 310  Q
    |||||    
T  15069711 gaaaa 15069707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 118 - 309
Target Start/End: Original strand, 17000480 - 17000672
Alignment:
Q  118 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 217  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||     
T  17000480 attatataatctgagctgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttcc 17000579  T
Q  218 g-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 309  Q
    | ||||||||||||||||| |||||||| |||||||||   |||||  | ||||||||  ||||  |||||||||||||||||||||||||||    
T  17000580 gtttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttccccagaaaatcagaaa 17000672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 24 - 315
Target Start/End: Original strand, 23442747 - 23443037
Alignment:
Q  24 aaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattata 123  Q
    |||||||||||||||||  ||| ||  |||| ||| | |||||||||||||| | ||| |  ||| | |||||||  | || |||| | |||||||||||    
T  23442747 aaacttcaaaaaatagggcgcgttacatgatgtttccggattatataattcggaaaccccccaaaca-tctttttttaaggtaaaatagttcggattata 23442845  T
Q  124 taatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttg 223  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||| |  | ||||||| ||| ||||||||||||||||||||| |||||| |||||||    
T  23442846 taatccaaactgtatcagcacaaatcctaaacatatttgtaacatgtacagccattttagggacaatattaatcttcctaactcttatccttttgttttg 23442945  T
Q  224 ggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||||||| |||||||| ||||||||| |||||||    ||||||||| ||||  || |||||||||||| |||||||||||| ||||    
T  23442946 ggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattc 23443037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 93 - 315
Target Start/End: Original strand, 27794909 - 27795129
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| ||||| | |||| ||||||||||| ||||||||||||| |||||| ||||||||||| ||||||  || ||||||||||||| |||||    
T  27794909 ctttttcaagg-aaaaatagttcgaattatataatctgaactgtatcagcgcaaattttaaacatgtttataacatagatagtcattttatggacaatat 27795007  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    |||||||||||||| |||| ||||||||||||||||||||||| |||||||| ||||| ||| ||||||   | ||||||||| ||||  ||||||||||    
T  27795008 taatcttcctaactatcat-cttctgttttgggtcattgttacctgttcttagtcaaacatcgggtttttgggctacttgatcggattgctccgaaactt 27795106  T
Q  293 ccccagaaaatcagaaaatattc 315  Q
    || ||||||||||||||| ||||    
T  27795107 ccacagaaaatcagaaaaaattc 27795129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 305
Target Start/End: Complemental strand, 34162878 - 34162591
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  | | ||  |||| ||| | ||||| ||||| || | ||| | |||| || ||||||||||| |||  || ||||    
T  34162878 aatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaa--cagttcg 34162781  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||| ||| ||||||||||||||||||||  |||||||    
T  34162780 aattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagccattttagggacaatattaatcttcctaactcctatccttc 34162681  T
Q  217 tg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
     | |||||||||||||||||||||||||| |||||||||   |||||  | ||||||||  | ||  |||||||||||||||||||||||    
T  34162680 cgtttttgggtcattgttacatgttcttagtcaaaaatcgaattttcgggctacttgattggtttgctccgaaacttccccagaaaatca 34162591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 125 - 315
Target Start/End: Complemental strand, 45567940 - 45567750
Alignment:
Q  125 aatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgg 224  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| ||| |||||||||||| ||||||||||||| | ||||||||    
T  45567940 aatccgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatctttctaactctcatccatttgttttgg 45567841  T
Q  225 gtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||||||| |||||||| | ||||||| |||||||    ||||||||| ||||  ||||||||||||||| |||||||||||| ||||    
T  45567840 gtcattgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttccccaaaaaatcagaaaaaattc 45567750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 113 - 315
Target Start/End: Original strand, 49786365 - 49786567
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    ||||||||||||||||| |||||||||||||||||| |||||| | ||||||||||| || | ||||||||||| ||||||||||||||||||||| |||    
T  49786365 ttcggattatataatcctaactgtatcagcacaaatcctaaacttatttgtaacatgtatagccattttatggacaatattaatcttcctaactcttatc 49786464  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||| |||||||||||| ||||||||||| ||| |||||||||| ||||||    ||||||||| ||||  || |||||||||||| |||||||||||| |    
T  49786465 cttttgttttgggtcaatgttacatgtttttagtcaaaaatcaagttttcggcctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaa 49786564  T
Q  313 ttc 315  Q
    |||    
T  49786565 ttc 49786567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 54 - 310
Target Start/End: Complemental strand, 3561457 - 3561200
Alignment:
Q  54 ttttttctgattatataattcgaacacc-tcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattcta 152  Q
    ||||||| ||||||| |||  ||||||| || |||| || ||||||||||||||||||  |||| |||||||||||||||||||||||||||||||| |     
T  3561457 ttttttcggattatagaatctgaacaccctcctaaacaccctttttcaagggaaaaacggttcgaattatataatccgaactgtatcagcacaaattatg 3561358  T
Q  153 aacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaa 252  Q
    ||||||||||||||||  || || |||||| ||| | |||||||||| |||||||||||| ||||||||| |||||||||||  |||||||| |||||||    
T  3561357 aacatgtttgtaacatagatagtaattttaaggacagtattaatctttctaactctcatcattctgttttaggtcattgttagttgttcttagtcaaaaa 3561258  T
Q  253 tcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    || | | ||   | ||||||||||||||  |||||||||| |||| ||||||||||||    
T  3561257 tccgatctttgggttacttgatcagattgctccgaaactttcccataaaatcagaaaa 3561200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 229
Target Start/End: Complemental strand, 32817768 - 32817557
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||  ||  |||| ||| | ||||| ||||| |||| ||| | |||| || ||||||||||| |||| || ||||    
T  32817768 aatccggaaacttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaaccccctaaacaccctttttcaaggtaaaa-cagttcg 32817670  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||| ||||||||    
T  32817669 gattatataatccgaactgtatcagcacaaatcctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatccttc 32817570  T
Q  217 tgttttgggtcat 229  Q
    |||||||||||||    
T  32817569 tgttttgggtcat 32817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 113 - 308
Target Start/End: Complemental strand, 18583606 - 18583411
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||||||||| |||||||||| |||||||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||| ||||||||| |||    
T  18583606 ttcggattatataatctgaactgtatcggcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatctgcctaactcttatc 18583507  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaa 308  Q
    ||| ||||||||||||||||||| |||||||| ||||||||| |||||||  | ||||||||| ||||  || |||||||||||| ||||||||||    
T  18583506 cttttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaa 18583411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 68 - 315
Target Start/End: Complemental strand, 26723595 - 26723348
Alignment:
Q  68 ataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaaca 167  Q
    ||||| |||||||| | |||| || |||||| |||||||||||  |||||||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  26723595 ataatccgaacaccccctaaacacccttttttaagggaaaaacggttcggattatataatccgaactatatcagcacaaatttaaaacatgtttgtaaca 26723496  T
Q  168 tgaattgtcattttatgg-agaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaaga 266  Q
    || || ||||||||| || | ||||||||||||||| ||||| ||| |||| ||||| ||||||||||  |||||||| | ||||||| ||||||         
T  26723495 tg-atagtcattttagggaacaatattaatcttccttactctgatcattctattttgagtcattgttatctgttcttagtaaaaaatcgggtttttggac 26723397  T
Q  267 tacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||||| ||||  |||||||||||||||||||||||||||| ||||    
T  26723396 tacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattc 26723348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 106 - 302
Target Start/End: Complemental strand, 40650744 - 40650548
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| |||||||||||| ||| |||||||||||||||||||| ||| ||||||||||||||| ||  |||||||| ||| ||||||||||||||||||    
T  40650744 aaaacagttcggattatatgatctgaactgtatcagcacaaattataaccatgtttgtaacatggataatcattttagggacaatattaatcttcctaac 40650645  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 302  Q
    ||||||||||||  |||||||||||||||| |||||||| | ||||| |  ||||||  | ||||||||| ||||  |||||||||||| |||||||    
T  40650644 tctcatccttctcgtttgggtcattgttacctgttcttagttaaaaaccgagttttcgggctacttgatcggattgctccgaaacttcctcagaaaa 40650548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 113 - 251
Target Start/End: Complemental strand, 44573158 - 44573021
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||    
T  44573158 ttcggattatataatctgaactgtat-agcacaaattataaacatgtttgtaacatgaatagtcattttagggacaatattaatctttctaactctcatc 44573060  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaa 251  Q
    |||||||||||| |||||||||| |||||||| ||||||    
T  44573059 cttctgttttggatcattgttacttgttcttagtcaaaa 44573021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 93 - 303
Target Start/End: Original strand, 38885305 - 38885500
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||              ||||||||| ||| |||||    
T  38885305 ctttttcaaggtaaaa-catttcggattatataatccgaactgtatcagcacaaattctaaacatgt--------------gtcattttaaggacaatat 38885389  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||| | ||||||  |||||||  | ||||||||| ||||  ||||||||||    
T  38885390 taattttcctaactctcatccttctgttttgggtcattgttacttgttcttagttaaaaattgggttttcgggctacttgatcggattgctccgaaactt 38885489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 310
Target Start/End: Complemental strand, 6223897 - 6223616
Alignment:
Q  15 tcaatccgaaaacttcaaaaaa-taggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacact 113  Q
    |||||||||||||||||||||| |||   ||  ||  |||||||||  ||||| ||||| |||||||| |||||| |  ||||||||||| ||||||| |    
T  6223897 tcaatccgaaaacttcaaaaaaatagagcgcattacatgatttttttggattacataatccgaacaccccataaacatcctttttcaaggtaaaaacagt 6223798  T
Q  114 tcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcc 213  Q
    |||||||||||||||| |          |||||||| |||| |||||||||||||| || ||||||||| ||| |||| |     |||||||| |||| |    
T  6223797 tcggattatataatccaa----------cacaaattttaaatatgtttgtaacatggatagtcattttagggacaataat-----tcctaactatcattc 6223713  T
Q  214 ttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||||  | ||||||||| ||||  || ||||||| |||||||||||||||||    
T  6223712 ttctgttttaggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactttcccagaaaatcagaaaa 6223616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 305
Target Start/End: Original strand, 42928963 - 42929173
Alignment:
Q  97 ttcaagggaaaaacact--tcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatta 194  Q
    ||||||||||||| |||  ||||||||||||||||| |||||||||| ||||||  | | ||||||| ||||||| |||| ||||||| |||  ||||||    
T  42928963 ttcaagggaaaaaaactgttcggattatataatccggactgtatcagtacaaatcatgagcatgtttataacatgtattgccattttaaggaccatatta 42929062  T
Q  195 atcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttcc 294  Q
    || ||| |||||||||| ||| |||||| | |||||||||  |||||| | ||||||||| ||||||| || ||||||||||||||  |||||||||| |    
T  42929063 attttcttaactctcattcttatgttttagatcattgttagttgttctcagtcaaaaatctggttttcgagctacttgatcagattgctccgaaactttc 42929162  T
Q  295 ccagaaaatca 305  Q
    ||| |||||||    
T  42929163 ccataaaatca 42929173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 25563561 - 25563274
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||  |||||||||||| ||||||| ||||||||| | |||||||  ||  |||  ||   |||||| |||||||||||||||||||| ||||    
T  25563561 aatccgaaaaactcaaaaaatagggtgcgctacttgattttt-cagattata--atctgaaagccctctaaatattctttttcaagggaaaaacagttcg 25563465  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||  ||||| ||||||         | ||||||||||||| ||| || ||||||||| ||| |||||||| |||| |||| |||||||||     
T  25563464 gattatataatatgaactttatcagt--------tgaacatgtttgtaatatggatagtcattttaaggacaatattaagcttcataaccctcatccttt 25563373  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||| |||||||||||  |||| ||| ||||||||| | | ||| || ||||||||| ||||  ||||||||||||| |||||||||| ||| ||||    
T  25563372 tgttttaggtcattgttagttgttattagtcaaaaatccgatattcgagctacttgatcggattgctccgaaacttcccaagaaaatcaggaaaaattc 25563274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 96 - 234
Target Start/End: Complemental strand, 8704597 - 8704459
Alignment:
Q  96 tttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaa 195  Q
    |||||||||||||| | ||| |||||||||||||||||||||||| ||| | |||| |||||| || || |||| || ||||||||| |||   ||||||    
T  8704597 tttcaagggaaaaatagttcagattatataatccgaactgtatcaccaccagttctgaacatgattatatcatggatagtcattttaaggatcttattaa 8704498  T
Q  196 tcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    ||||||||||| |||| || || |||| |||||||||||    
T  8704497 tcttcctaactatcattctcctattttaggtcattgtta 8704459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 9445922 - 9445839
Alignment:
Q  139 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||| |||||||||||| |||||| |||| || ||||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  9445922 cagcaccaattctaaacatctttgtagcatggatagtcattttaaggagaatgttaatcttcctaactctcatccttgtgtttt 9445839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 32542490 - 32542556
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcatt 179  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||    
T  32542490 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcatt 32542556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 94 - 234
Target Start/End: Original strand, 890592 - 890732
Alignment:
Q  94 tttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatt 193  Q
    |||||||  |||||| || |||||||||||| ||||||| ||||||||||||||||||||   ||||||||||||| ||   || |||| ||| ||||||    
T  890592 tttttcagtggaaaagcagttcggattatattatccgaaatgtatcagcacaaattctaagtctgtttgtaacatggataaccagtttaaggacaatatt 890691  T
Q  194 aatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    ||||||| |||||  |||  || |||||| |||||||||||    
T  890692 aatcttcataacttccattattttgttttaggtcattgtta 890732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 308
Target Start/End: Complemental strand, 45880095 - 45879976
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 288  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||  | || ||| |||||||||  |||||   |||||||||||| |||  ||||||    
T  45880095 atattaatcttcctaactttcatccttctgttttaggtcattgttagttttttttagtcaaaaatctagtttttgggatacttgatcaaattgctccgaa 45879996  T
Q  289 acttccccagaaaatcagaa 308  Q
    ||||  ||||||||| ||||    
T  45879995 acttatccagaaaattagaa 45879976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 215
Target Start/End: Complemental strand, 9446157 - 9446055
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||  |||||||||| ||| |||||| |||||| ||||||||| ||||||| || ||||||||| ||| ||||||||||||| || || |||||    
T  9446157 ttcggattacgtaatccgaacagtaccagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatcttcttagctttcatc 9446058  T
Q  213 ctt 215  Q
    |||    
T  9446057 ctt 9446055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 5210400 - 5210305
Alignment:
Q  54 ttttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaatt 149  Q
    ||||||| ||||||| ||| |||||||| | |||| ||  ||||||| |||||||||| || ||||||||||||| ||| ||||||||||||||||    
T  5210400 ttttttcagattatagaatccgaacaccccttaaacaccatttttcaggggaaaaacattttggattatataatctgaaatgtatcagcacaaatt 5210305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 26230150 - 26230269
Alignment:
Q  115 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 214  Q
    |||||||||||| ||||||||||||| ||||| |||||| | || |||||||||| || | || |||| |||  |||||||||||| || ||||||||||    
T  26230150 cggattatataacccgaactgtatcaacacaagttctaatcttgcttgtaacatggatagccaatttaaggatcatattaatcttcatagctctcatcct 26230249  T
Q  215 tctgttttgggtcattgtta 234  Q
    ||| |||  | |||||||||    
T  26230250 tctatttcagttcattgtta 26230269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 43319016 - 43318933
Alignment:
Q  139 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||| |||||| ||||||||||||||||  || ||||||||| | | ||||||||||||||||||| |||||||| ||||||    
T  43319016 cagcaccaattctgaacatgtttgtaacattgatagtcattttaagaacaatattaatcttcctaactttcatccttgtgtttt 43318933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 800621 - 800545
Alignment:
Q  146 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    ||||| ||||||||||||| |||| || ||||||||  ||| ||||||||| |||||||||||||||||| ||||||    
T  800621 aattcaaaacatgtttgtagcatggatagtcatttttaggacaatattaattttcctaactctcatccttgtgtttt 800545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 38159043 - 38159001
Alignment:
Q  192 ttaatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  38159043 ttaatcttcctaactctcatccttctgttttaggtcattgtta 38159001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 11844407 - 11844495
Alignment:
Q  146 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    |||||| |||||| || ||||||| ||  |||||||| |||| |||||||||||||| ||| ||| ||| ||||||| |||||||||||    
T  11844407 aattctgaacatgcttataacatgtataatcattttaaggagcatattaatcttccttactatcaccctcctgttttaggtcattgtta 11844495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 43319220 - 43319144
Alignment:
Q  146 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||| ||||||||||||||||  || ||||||||| ||| ||||||||||||| || || |||||||| ||||||    
T  43319220 aattctgaacatgtttgtaacattgatagtcattttaaggataatattaatcttcatagctttcatccttgtgtttt 43319144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 8364143 - 8364213
Alignment:
Q  151 taaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    ||||||||||||||||||| || |||||||||   | |||||||||| ||||||||||||||||| ||||||    
T  8364143 taaacatgtttgtaacatggatagtcattttaaaaataatattaatc-tcctaactctcatccttgtgtttt 8364213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 234
Target Start/End: Complemental strand, 5284392 - 5284261
Alignment:
Q  103 ggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcct 202  Q
    ||||||||| || | ||||||||||  ||| || ||||||| ||||| | ||||||||| | ||||| ||   || |||| ||   ||||||||||||||    
T  5284392 ggaaaaacaatttgaattatataatatgaaatgcatcagcataaattttgaacatgtttatgacatggataaccagtttaagggtcatattaatcttcct 5284293  T
Q  203 aactctcatccttctgttttgggtcattgtta 234  Q
    |||  ||||| ||||||||| |||||||||||    
T  5284292 aaccttcatcattctgttttaggtcattgtta 5284261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 315
Target Start/End: Complemental strand, 44573007 - 44572960
Alignment:
Q  268 acttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||||||||  ||||||||||||||| |||||||||||| ||||    
T  44573007 acttgatcagattgctccgaaacttccccataaaatcagaaaaaattc 44572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 800959 - 800895
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacc 81  Q
    ||||||||||  ||||||||||||  ||  |||||||||||||| ||||||| ||| ||||||||    
T  800959 aatccgaaaatctcaaaaaatagggcgctttatttgattttttcggattatagaatccgaacacc 800895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 5e-72; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 28230625 - 28230381
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||| || ||||| ||| | ||||| ||||| || | ||| | |||| || ||||||||||| |||| || ||||    
T  28230625 aatccggaaacttcaaaaaatagggcgcgttacttgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa-cagttcg 28230527  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||    
T  28230526 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttc 28230427  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttc 262  Q
    ||||||||||||||||| |||||||||| |||||| || |||||||    
T  28230426 tgttttgggtcattgttgcatgttcttagtcaaaattcgggttttc 28230381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 93 - 311
Target Start/End: Complemental strand, 36468618 - 36468401
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    ||||||||||| |||| || || | |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | | |||||    
T  36468618 ctttttcaaggtaaaa-cagtttgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggaacaatat 36468520  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaactt 292  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||  | ||||||||| ||||  ||||||||||    
T  36468519 taatcttcataactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctccgaaactt 36468420  T
Q  293 ccccagaaaatcagaaaat 311  Q
    |||||||||||||||||||    
T  36468419 ccccagaaaatcagaaaat 36468401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 24690491 - 24690193
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||   | ||||||||||||||| ||||||| ||| |||||||| |  ||| || |||||||||||||||||||  | |    
T  24690491 aatccggaaacttcaaaaaatagggctcactatttgattttttcagattatacaatccgaacacccctcaaacaccctttttcaagggaaaaacagat-g 24690393  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| |||||||||||||| ||||| ||| ||||||||||||||| || ||||||||||||| ||||||||||| ||||||||||||||||     
T  24690392 gattatataatctgaactgtatcagcataaattttaagcatgtttgtaacatggatcgtcattttatggacaatattaatctacctaactctcatccttt 24690293  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcag-gttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||||||||||||||  ||||||| |||| |||| |  |||||  | ||||||||| ||||  ||||||||||| ||| |||||||||||| ||||    
T  24690292 tgttttgggtcattgttacccgttcttagtcaataatcggatttttcgggctacttgatcggattgctccgaaacttctccataaaatcagaaaaaattc 24690193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 17 - 309
Target Start/End: Complemental strand, 42925798 - 42925506
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||  ||  |||| ||||| ||||| ||||| || | ||| | |||| ||  |||||||||| |||| || ||||    
T  42925798 aatccggaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatccggaaaccccctaaacaccttttttcaaggtaaaa-cagttcg 42925700  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||    
T  42925699 gattatataatacgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 42925600  T
Q  217 tg-ttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaa 309  Q
     | |||||| |||||||||| |||||||| ||||||||  |||||||  | ||||||||| ||||  |||||||||| ||||||||||||||||    
T  42925599 cgtttttggatcattgttacttgttcttagtcaaaaattgggttttcgggctacttgatcggattgctccgaaacttacccagaaaatcagaaa 42925506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 31985677 - 31985382
Alignment:
Q  17 aatccgaaaacttcaaaaaa--taggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacactt 114  Q
    ||||||||||| ||||||||  ||||  ||| ||  |||||||||| ||||| |||||||||||||| | |||| ||  |||||||||||  ||||| ||    
T  31985677 aatccgaaaacctcaaaaaaaatagggcgcgttacatgattttttcggattacataattcgaacaccccttaaacaccatttttcaagggggaaacagtt 31985578  T
Q  115 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 214  Q
    ||||||||||||| |||||||||||| |||||||| ||||||| ||| |||||||||| ||||||||||||| |||||||||||| |||||||||||| |    
T  31985577 cggattatataattcgaactgtatcaacacaaattttaaacatatttttaacatgaatagtcattttatggacaatattaatctttctaactctcatcat 31985478  T
Q  215 tctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    ||||||||||||||||||||   ||||||| ||||||||| ||||||   | |||||||||||||| |||| |||||| |  | ||||||||||||    
T  31985477 tctgttttgggtcattgttaaccgttcttagtcaaaaatctggtttttgggctacttgatcagattgttccaaaactttcttacaaaatcagaaaa 31985382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 19225755 - 19225458
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||| |||||||||||||||||| |||| ||  |||| ||| | ||||| ||||| || | | | | |||| ||  |||||||||  |||| || ||||    
T  19225755 aatccaaaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatccggaaatcccctaaacaccatttttcaagataaaa-caattcg 19225657  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||  |||| |||||||||||||||||||||||    
T  19225656 gattatataatctgaacggtatcagcacaaattctaaacatgtttgtaacatggatattcattttatggatgatataaatcttcctaactctcatccttc 19225557  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||||||||||||||   |||||| |||||||||||||||||    || |||||| ||||  |||||||||||||||||||||||||||| ||||    
T  19225556 tgttttgggtcattgttacccattcttagtcaaaaatcaggttttcggactatttgatcggattgctccgaaacttccccagaaaatcagaaaaaattc 19225458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 117 - 302
Target Start/End: Original strand, 9151897 - 9152082
Alignment:
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||    
T  9151897 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 9151996  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 302  Q
    |||||||||||||||||||||||||||| | ||||||| ||||||     ||||||||| ||||  |||||||||||| |||||||    
T  9151997 tgttttgggtcattgttacatgttcttagtaaaaaatcgggtttttggactacttgatcggattgctccgaaacttccacagaaaa 9152082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 106 - 309
Target Start/End: Complemental strand, 42865171 - 42864968
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| ||| ||||||||||||||||||    
T  42865171 aaaacagtccggattatataatccgaactgtatcagcacaaattctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 42865072  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    ||||||||||||||||||||||||||| || |||||||  |||||||||||||||||    ||||||||| ||||  || ||||| |||||||||||| |    
T  42865071 tctcatccttctgttttgggtcattgtcacctgttcttggtcaaaaatcaggttttcggactacttgatcggattgctctgaaacatccccagaaaatta 42864972  T
Q  306 gaaa 309  Q
    ||||    
T  42864971 gaaa 42864968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 106 - 315
Target Start/End: Original strand, 36629295 - 36629502
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||  | ||||||||| ||||||||||||||||||||||    
T  36629295 aaaacagttcggattatataatccgaactgtatcagcgcaaattttaaacatgtttgttacatg--tcgtcattttagggagaatattaatcttcctaac 36629392  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    ||||||||||||||||||| ||| |||||| || ||||| ||||||||| |||||||  | ||||||||| ||||  ||||||||||||||| |||||||    
T  36629393 tctcatccttctgttttggctcactgttacctggtcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccaaaaaatca 36629492  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  36629493 gaaaaaattc 36629502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 17 - 302
Target Start/End: Complemental strand, 36946449 - 36946165
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||| |||||||||||  |||| || || |||||||  ||||||| ||| | ||||||   |||| ||  |||||||||||||||||| ||||    
T  36946449 aatccgaaaacctcaaaaaatagagtgcgttacttaatttttttggattataaaatccaaacaccatttaaacaccttttttcaagggaaaaacaattcg 36946350  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||||||||||  ||||||||  || |||||||| |||||||||||||||||||     
T  36946349 gattatataacccgaactgtatcagcacaaattctgaatatgtttgtaacatgaataatcatttta-agacaatattaagcttcctaactctcatccttt 36946251  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 302  Q
    ||||||||||||||||||  |||| ||| |||||| || |||||||  |||||||||||  |||  | ||||||||||||||||||    
T  36946250 tgttttgggtcattgttagttgttattagtcaaaattctggttttcgggatacttgatcgaattgcttcgaaacttccccagaaaa 36946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 24 - 315
Target Start/End: Original strand, 36408380 - 36408670
Alignment:
Q  24 aaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattata 123  Q
    ||||||||||||||| |  ||| ||  |||| ||| | ||||| ||||| || | |||||||||| ||  | |||||||| |||| || |||| ||||||    
T  36408380 aaacttcaaaaaataaggcgcgatacatgatgtttccggattacataatccggaaacctcataaacaccatctttcaaggtaaaa-cagttcgaattata 36408478  T
Q  124 taatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || |||||| ||| ||||||||||||| |||||||| | |||||||||||    
T  36408479 taatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtaattttagggacaatattaatcttcttaactctctttcttctgttttg 36408578  T
Q  224 ggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||||||| |||||||| ||||||||  |||||||    ||||||||| ||||  ||||||||||| ||| |||||||||||| ||||    
T  36408579 ggtcattgttacgtgttcttagtcaaaaatttggttttcggactacttgatcggattgctccgaaacttctccaaaaaatcagaaaaaattc 36408670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 106 - 315
Target Start/End: Original strand, 33151298 - 33151501
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||     || ||| ||||||||||||||||||    
T  33151298 aaaacagttcggattatataattcgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagt-----tagggacaatattaatcttcctaac 33151392  T
Q  206 tctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatca 305  Q
    |||||||||||| ||||||||||||||||  |||||||| ||||||||  |||||||    ||||||||| |||| ||||||||||| ||||||||||||    
T  33151393 tctcatccttctattttgggtcattgttatctgttcttagtcaaaaattgggttttctgactacttgatcggattattccgaaactt-cccagaaaatca 33151491  T
Q  306 gaaaatattc 315  Q
    ||||| ||||    
T  33151492 gaaaaaattc 33151501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 99 - 309
Target Start/End: Original strand, 1518790 - 1519000
Alignment:
Q  99 caagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatct 198  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||  |||||||||||| |||||||||||    
T  1518790 caagggaaaaacagttcggattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatcgataatcattttatggacaatattaatct 1518889  T
Q  199 tcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccag 298  Q
    || |||||||||||||||| |||||||| |||||||  |||||||| | ||||||  |||||||    ||||||||| ||||  |||||||||| || ||    
T  1518890 tcttaactctcatccttctattttgggttattgttagctgttcttagtaaaaaatagggttttcggactacttgatcggattgctccgaaactttcctag 1518989  T
Q  299 aaaatcagaaa 309  Q
    |||| ||||||    
T  1518990 aaaaacagaaa 1519000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 17 - 302
Target Start/End: Original strand, 3936110 - 3936394
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||| ||  |||| ||| | ||||| ||||| | || ||| | |||| || ||||||||||| |||| || | ||    
T  3936110 aatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccaaaaaccccctaaacaccctttttcaaggtaaaa-cagtccg 3936208  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
     ||||||||||||||| ||||| |||||||||| ||||||||||||||||||| ||  |||||||| ||| |||||||||||||||||||||||||||||    
T  3936209 aattatataatccgaaatgtattagcacaaattgtaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttc 3936308  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaa 302  Q
    | ||||||||||||||||| | |||||| ||||||||| | |||||    | ||||||| ||||  ||||||||||||||||||||    
T  3936309 tattttgggtcattgttacctattcttagtcaaaaatcggattttcggactgcttgatcggattgctccgaaacttccccagaaaa 3936394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 113 - 310
Target Start/End: Complemental strand, 3304820 - 3304623
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||   ||||||| ||| ||||||||||||||||||||| |||    
T  3304820 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttagggacaatattaatcttcctaactcttatc 3304721  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
     || ||||||||||||||||||| |||||||| ||||||||| |||| ||  | ||||||||| ||||  || |||||||||| | ||||||| ||||    
T  3304720 attttgttttgggtcattgttacctgttcttagtcaaaaatcgggttctcgggctacttgatcggattgctctgaaacttcccaaaaaaatcaaaaaa 3304623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 62 - 234
Target Start/End: Original strand, 5278310 - 5278482
Alignment:
Q  62 gattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgttt 161  Q
    ||||||| ||| | |||||| | ||||||| || |||||||||||||| | |||||||||||||||| ||||||||| |||| ||||| | |||||||||    
T  5278310 gattatagaatccaaacaccccttaaataccctctttcaagggaaaaatagttcggattatataatctgaactgtattagcataaattttgaacatgttt 5278409  T
Q  162 gtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    |||||||| || ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  5278410 gtaacatggatagtcattttaaggataatattaatcttcctaactcttatccttctgttttgggtcattgtta 5278482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 130 - 315
Target Start/End: Original strand, 19818494 - 19818679
Alignment:
Q  130 gaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcat 229  Q
    ||||| ||||||||||||| ||||||||| |||||||||| || || |||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  19818494 gaactctatcagcacaaatcctaaacatgcttgtaacatggatagttattttagggacaatattaatcttcctaactctcatccttctgttttgggtcat 19818593  T
Q  230 tgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||| |||||||  || |||||| ||||||     ||||||||| ||||  |||||||||| ||||||||||||||||| ||||    
T  19818594 tgttacctgttcttggtcgaaaatcgggtttttggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattc 19818679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 8154901 - 8155198
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||  ||| ||  |||| ||| | ||||| ||||| |||| ||| | |||| || |||||| |||| ||||  | ||||    
T  8154901 aatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaaccccctaaacacccttttttaaggtaaaat-agttcg 8154999  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||  |||| ||||||||||||| |||||||| ||||||||||| || | ||||||| ||| ||||| |||||||||| |||| ||||||     
T  8155000 gattatataatctaaactctatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatcaatcttcctagctcttatccttt 8155099  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||| ||||||| |||| |||||||| ||||||||| |||||||    |||||||||  ||| ||| |||||||||| | |||||||||||| ||||    
T  8155100 tgtttttggtcattattacctgttcttagtcaaaaatcgggttttcggactacttgatcgaattgttctgaaacttcccaaaaaaatcagaaaaaattc 8155198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 94 - 306
Target Start/End: Complemental strand, 6467221 - 6467009
Alignment:
Q  94 tttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatatt 193  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||| ||||| |||||||||||||||||| ||| || || |||||| ||  ||||||    
T  6467221 tttttcaagggaaaaacaattcagattatataatccgaactatatcaacacaagttctaaacatgtttgtaatatggatagttattttaagggcaatatt 6467122  T
Q  194 aatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttc 293  Q
    ||| |||||||||||| ||||||| |||| |||||||||||  |||||||| | ||||||  ||| |||  | ||||||||| |||| ||| |||| |||    
T  6467121 aattttcctaactctcttccttctattttaggtcattgttagctgttcttagttaaaaatttggtattccggctacttgatcggattgttctgaaatttc 6467022  T
Q  294 cccagaaaatcag 306  Q
    || ||||||||||    
T  6467021 cctagaaaatcag 6467009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 315
Target Start/End: Original strand, 47202496 - 47202786
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||||||||||||||||  ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| || |||||| |||| ||||  | ||||    
T  47202496 aatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggtaaaat-agttcg 47202594  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||| || | | ||||| ||| ||||||||||||||||||||| ||||||     
T  47202595 gattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccgttttagggacaatattaatcttcctaactcttatccttt 47202694  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||||||||        ||||||| ||||||||| |||||||  | ||||||||  ||||  ||  ||||||||||| |||||||||||| ||||    
T  47202695 tgttttgggtcat-------cgttcttagtcaaaaatcgggttttcgggctacttgattggattgctcttaaacttccccaaaaaatcagaaaaaattc 47202786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 230
Target Start/End: Complemental strand, 24042345 - 24042132
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| ||||||||||||||| |  ||| ||  |||| ||| | ||||| ||||| || | ||| | |||| ||  |||||||||| |||| || ||||    
T  24042345 aatccggaaacttcaaaaaataaggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaa-cagttcg 24042247  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||| ||| ||||| |||||||||||||||||||||||    
T  24042246 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatatcaatcttcctaactctcatccttc 24042147  T
Q  217 tg-ttttgggtcatt 230  Q
     | ||||||||||||    
T  24042146 cgtttttgggtcatt 24042132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 315
Target Start/End: Original strand, 31643138 - 31643339
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||||||||| |||||| ||||||| |||| |||||||| ||| ||||||| || |  |||||| ||| ||||||||||||||||||||| |||    
T  31643138 ttcggattatataatctgaactggatcagcataaatcctaaacatatttttaacatgtatagctattttagggacaatattaatcttcctaactcttatc 31643237  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||| |||||||||||||||||||||||||||| ||||||||| || ||||    ||||||||| ||||  || ||||||||| || |||||||||||| |    
T  31643238 cttttgttttgggtcattgttacatgttcttagtcaaaaatc-gggtttcggactacttgatcggattgctctgaaacttccgcaaaaaatcagaaaaaa 31643336  T
Q  313 ttc 315  Q
    |||    
T  31643337 ttc 31643339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 7115428 - 7115135
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||||| || |||||||||||| |||| || |||||||||||  ||||||||||  ||| ||| | |||| ||  ||||| | |||||||||| ||||    
T  7115428 aatccgaagacctcaaaaaatagggtgcgttacttgattttttcgaattatataatctgaaaaccccctaaacaccatttttaaggggaaaaacaattcg 7115329  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||| || || |||||| |||||||| | |   ||||| ||||||| ||   || |||||||| ||||||||||||  |||||||||||||||    
T  7115328 gattatataattcggaccgtatcaacacaaattttgagtttgtttctaacatggataaccaatttatggacaatattaatcttgataactctcatccttc 7115229  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    | |||| |||||||||||  |||||||| |||||||||  ||||||  | |||||||||  |||  || ||||||||| |||||||||||||||    
T  7115228 tatttttggtcattgttagttgttcttagtcaaaaatcgtgttttcgggctacttgatcgtattgctctgaaacttcctcagaaaatcagaaaa 7115135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 37518364 - 37518235
Alignment:
Q  106 aaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaac 205  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||   || ||||||||| | | | ||||||||||||||||    
T  37518364 aaaacagttcggattatataatccgaactgtatcagcataaattctaaacatgtttgtaacagagatagtcattttaggaacactattaatcttcctaac 37518265  T
Q  206 tctcatccttctgttttgggtcattgttac 235  Q
    ||||||||||||||||| ||||||||||||    
T  37518264 tctcatccttctgttttaggtcattgttac 37518235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 315
Target Start/End: Complemental strand, 33574105 - 33573903
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||| ||||||||||| ||||||||| |||||||||  ||||||| ||||||||||| ||    |||||| ||| |||||||||||| |||||||| |||    
T  33574105 ttcgaattatataatctgaactgtatgagcacaaatcataaacatatttgtaacatgtataactattttagggacaatattaatctttctaactcttatc 33574006  T
Q  213 cttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaata 312  Q
    ||| ||||||| |||||||||||||||| ||| ||||||||  ||||||| |  ||||||||| ||||  || |||||||||||| |||||||||||| |    
T  33574005 cttttgttttgagtcattgttacatgtttttaatcaaaaattgggttttcgaactacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaa 33573906  T
Q  313 ttc 315  Q
    |||    
T  33573905 ttc 33573903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 261
Target Start/End: Original strand, 39581740 - 39581984
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||||||||| | |||||||| || ||| || ||| | ||||| ||||||| ||||| |||||| |||||| || ||||||||||||| ||| | |||     
T  39581740 aatccgaaaaccttaaaaaataagacgcgttacttgctattttcggattatagaattcaaacaccccataaacaccctttttcaagggagaaataattca 39581839  T
Q  117 gattatataatccgaactgtatcag--cacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 214  Q
    |||||||||||||||||||||||||  |||||||| |||   ||||||||||||||||   || ||||   ||| ||||||||||| |||||||||| ||    
T  39581840 gattatataatccgaactgtatcagcacacaaattataagtttgtttgtaacatgaataaccaattta--aagactattaatcttcataactctcattct 39581937  T
Q  215 tctgttttgggtcattgttacatgttcttactcaaaaatcaggtttt 261  Q
    |||||||| |||||||||||  | |||||  ||||||||| ||||||    
T  39581938 tctgttttaggtcattgttagttattcttcgtcaaaaatccggtttt 39581984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 174 - 315
Target Start/End: Original strand, 43737240 - 43737381
Alignment:
Q  174 gtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttga 273  Q
    ||||||||| ||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | ||||| | |||||||  | |||||||    
T  43737240 gtcattttagggacaatattaatcttcctaactctgatccttatgttttgggtcattgttacatgttcttagttaaaaaccgggttttcgggctacttga 43737339  T
Q  274 tcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    || ||||  ||||||| || ||||||||||||||||| ||||    
T  43737340 tcggattgctccgaaattttcccagaaaatcagaaaaaattc 43737381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 6467711 - 6467843
Alignment:
Q  29 tcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatc 128  Q
    |||||||||||| || | ||  |||||| ||| ||||| ||||| |||||||| | |||| || ||||||||||||||||||| ||||||||||||||||    
T  6467711 tcaaaaaatagggtgtgttacatgatttgttcggattacataatccgaacaccccctaaacaccctttttcaagggaaaaacagttcggattatataatc 6467810  T
Q  129 cgaactgtatcagcacaaattctaaacatgttt 161  Q
    ||||||||||||||| ||||| |||||||||||    
T  6467811 cgaactgtatcagcataaattttaaacatgttt 6467843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 37398877 - 37398760
Alignment:
Q  189 atattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaa 288  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||  |||||||| | ||||||  |||||| | | ||||||||||||||  ||||||    
T  37398877 atattaatcttcctaactctcatcattctgttttaggtcattgttagttgttcttagtaaaaaattcggtttttaggctacttgatcagattgctccgaa 37398778  T
Q  289 acttccccagaaaatcag 306  Q
    ||||||| ||||||||||    
T  37398777 acttccctagaaaatcag 37398760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 17 - 234
Target Start/End: Original strand, 43185796 - 43186000
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||||||||||||||||||||| |||||| |||||||| | | ||||||| ||| |||||| |  ||||| || | ||||||||| |||||||         
T  43185796 aatccgaaaacttcaaaaaatagg-tgcgctctttgatttat-cggattatagaatccgaacatcctataaacacccattttcaagg-aaaaaca----- 43185887  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
         |||||||| ||||||||||||||||||| ||||||||||| ||||||| ||  ||||||| |||| ||||||||  |||||||||||||| |||     
T  43185888 -----tataatccaaactgtatcagcacaaattttaaacatgtttataacatggataatcattttttggacaatattaacattcctaactctcatactta 43185982  T
Q  217 tgttttgggtcattgtta 234  Q
    | |||| |||||||||||    
T  43185983 tattttaggtcattgtta 43186000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 16983898 - 16983673
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    ||||| ||||| |||||||||||  || | |  ||| |||||||  |||||| ||| ||||||||  ||||| ||  ||||||| || ||||||| ||||    
T  16983898 aatccaaaaacctcaaaaaatagtgtgtgttccttgtttttttcaaattatagaatccgaacacc--ataaacaccatttttcagggaaaaaacagttcg 16983801  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    |||||||||||| ||| |||||||||||||||| |     ||||||||||||| ||   || ||||  || |||||||||||||||||||||||||||||    
T  16983800 gattatataatctgaattgtatcagcacaaattttgggtctgtttgtaacatggataaccagtttacagacaatattaatcttcctaactctcatccttc 16983701  T
Q  217 tgttttgggtcattgttacatgttctta 244  Q
    | |||| ||||||| |||  ||||||||    
T  16983700 tatttttggtcattattagctgttctta 16983673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 48775710 - 48775803
Alignment:
Q  116 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcat 211  Q
    |||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||| |||| |||| ||| ||||||||||||||||||| ||||    
T  48775710 ggattatataatccgaactgtat--gcacaaattttaaacatgcttgtaacatgaatagtcagtttaaggacaatattaatcttcctaactatcat 48775803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 204 - 315
Target Start/End: Complemental strand, 26555128 - 26555017
Alignment:
Q  204 actctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaat 303  Q
    |||||||||||||| |||||||||||||||||||||||||| | ||||| | |||||||  | ||||||||| ||||  || ||||||| ||||||||||    
T  26555128 actctcatccttctattttgggtcattgttacatgttcttagtaaaaaaacgggttttcgggctacttgatcggattgctctgaaactttcccagaaaat 26555029  T
Q  304 cagaaaatattc 315  Q
    ||||||| ||||    
T  26555028 cagaaaaaattc 26555017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 8214552 - 8214462
Alignment:
Q  124 taatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcct 214  Q
    |||||| ||||| | ||| || |||| | ||||||||||||||||  |||||||||||| ||| |||||||||||||||||||||||||||    
T  8214552 taatccaaactgcaccagaacgaattatgaacatgtttgtaacatcgattgtcattttaaggacaatattaatcttcctaactctcatcct 8214462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 8214352 - 8214243
Alignment:
Q  113 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatc 212  Q
    |||||||||  |||| | ||||| |||| ||| |||||| |||||||||| |||||| || |||||| || ||| |||||||||||||||||||||||||    
T  8214352 ttcggattacgtaattcaaactgcatcaacaccaattctgaacatgtttgcaacatggatagtcattctaaggacaatattaatcttcctaactctcatc 8214253  T
Q  213 cttctgtttt 222  Q
     || ||||||    
T  8214252 attgtgtttt 8214243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 48776268 - 48776175
Alignment:
Q  118 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcat 211  Q
    |||||||||||| || | ||| |||||||||| | ||||||||| ||||||| || || |||||| ||| ||||||||||||||||||||||||    
T  48776268 attatataatccaaattatattagcacaaattttgaacatgtttataacatggatagtgattttaaggataatattaatcttcctaactctcat 48776175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 230
Target Start/End: Complemental strand, 25613234 - 25613058
Alignment:
Q  54 ttttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaa 153  Q
    ||||||| ||||||| ||| ||| |||| | |||| ||  || |||| |||||| ||| ||||||||||| ||| | ||||||||||||| ||||||| |    
T  25613234 ttttttcggattatagaatccgagcaccccctaaacaccattattcaggggaaagacagttcggattataaaattcaaactgtatcagcataaattctta 25613135  T
Q  154 acatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcatt 230  Q
    |  |  |||||||||| || | || |||| ||   |||||||||||| |||||| |||||||||||||  |||||||    
T  25613134 aatttcttgtaacatggatagccaatttacgggtcatattaatcttcataactcacatccttctgtttaaggtcatt 25613058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 304
Target Start/End: Complemental strand, 48706077 - 48705870
Alignment:
Q  97 ttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaat 196  Q
    |||||||| |||||| ||||| |||||||||| |||||||||||||||| ||||||| | | ||| ||||| | ||    | |||| | |  ||||||||    
T  48706077 ttcaaggggaaaacaattcggtttatataatctgaactgtatcagcacagattctaagcctatttttaacacggataactagtttaagtaccatattaat 48705978  T
Q  197 cttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttcccc 296  Q
    |||||||||||  ||| || |||||| ||||||||||   |||||| | | ||||||    |||||  | |||||||||| ||| ||||||||||| |||    
T  48705977 cttcctaactcggatctttatgttttaggtcattgtttattgttctcagtaaaaaattcaattttcgggctacttgatcatattgttccgaaactttccc 48705878  T
Q  297 agaaaatc 304  Q
    | ||||||    
T  48705877 aaaaaatc 48705870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 5731005 - 5730941
Alignment:
Q  146 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctca 210  Q
    ||||||||||||||||||| ||||||| |||||||||   | |||||||||||| ||||||||||    
T  5731005 aattctaaacatgtttgtagcatgaatagtcattttaaatacaatattaatctttctaactctca 5730941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 16278236 - 16278312
Alignment:
Q  146 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||| || |||||||||||||| || ||||||||| ||| |||||||||| || | |||| ||||||| ||||||    
T  16278236 aattcttaatatgtttgtaacatggatagtcattttaaggacaatattaatcatctttactcccatccttgtgtttt 16278312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 315
Target Start/End: Complemental strand, 24042124 - 24042056
Alignment:
Q  247 caaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    |||||||| |||||||| | || |||||| || |  |||||||||||||||||||||||||||| ||||    
T  24042124 caaaaatcgggttttcaggctatttgatcggactgctccgaaacttccccagaaaatcagaaaaaattc 24042056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 37518215 - 37518123
Alignment:
Q  223 gggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattc 315  Q
    ||||||||||||| |||||||| | ||||||  ||||||     || |||||| ||||  |||||||||||||||||||||||||||| ||||    
T  37518215 gggtcattgttacctgttcttagttaaaaattgggtttttggactatttgatcggattgctccgaaacttccccagaaaatcagaaaaaattc 37518123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 48775588 - 48775703
Alignment:
Q  21 cgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaaggg--aaaaacacttcgga 118  Q
    ||||||| |||||||||||| |||  || ||||| ||||| ||||||  |||||||||||| | |||| |  || |||||||||  ||||| | || |||    
T  48775588 cgaaaacctcaaaaaatagggtgcattacttgatgttttcggattatggaattcgaacaccccttaaacatcctatttcaagggaaaaaaatagttagga 48775687  T
Q  119 ttatataatccgaact 134  Q
    ||||||||||||||||    
T  48775688 ttatataatccgaact 48775703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 8214648 - 8214597
Alignment:
Q  30 caaaaaataggatgcgctatttgattttttctgattatataattcgaacacc 81  Q
    |||||||||||| |||||||||||||||||| |||| || |||| |||||||    
T  8214648 caaaaaataggacgcgctatttgattttttcggattttagaatttgaacacc 8214597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 47239685 - 47239630
Alignment:
Q  94 tttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaatt 149  Q
    |||||||  ||||||||| |||||||||||||| || ||||||||||||| |||||    
T  47239685 tttttcagaggaaaaacagttcggattatataacccaaactgtatcagcataaatt 47239630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 5731214 - 5731145
Alignment:
Q  146 aattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 215  Q
    |||||| ||||||||| ||||||| || ||||||| | ||| ||||||||||||| || || ||||||||    
T  5731214 aattctgaacatgtttataacatggatagtcatttgaaggacaatattaatcttcttagctttcatcctt 5731145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 16278423 - 16278468
Alignment:
Q  124 taatccgaactgtatcagcacaaattctaaacatgtttgtaacatg 169  Q
    |||||| |||||||||||||| |||||| ||||||||| |||||||    
T  16278423 taatccaaactgtatcagcaccaattctgaacatgtttctaacatg 16278468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 37217572 - 37217536
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatcc 129  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  37217572 ctttttcaagggaaaaacagttcggtttatataatcc 37217536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 117 - 316
Target Start/End: Complemental strand, 142021 - 141823
Alignment:
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||| ||||||||    
T  142021 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatccttc 141922  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaatattct 316  Q
    || |||||||||||||| |||||||||| ||||||||| ||||||||   ||||||||| ||||  |||||||||||||||||||||||||||| |||||    
T  141921 tg-tttgggtcattgttgcatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattct 141823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 24 - 310
Target Start/End: Complemental strand, 3545 - 3259
Alignment:
Q  24 aaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcggattata 123  Q
    |||||||||||||||||  ||| ||  |||| ||| | ||||| ||||| || | ||| |||||| || ||||||||||| |||| || |||||||||||    
T  3545 aaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaacaccctttttcaaggtaaaa-cagttcggattata 3447  T
Q  124 taatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttg 223  Q
    ||||| |||||||||| || |||||||||||||||||||||||||  ||  |||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  3446 taatctgaactgtatcggcgcaaattctaaacatgtttgtaacatcgataatcattttagggacaatattaatcttcgtaactctcatccttctgttttg 3347  T
Q  224 ggtcattgttacatgttcttact-caaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    |||||||||||| |||||||| |  |||||||||||||||  | ||||||||||||||  || |||||||||||||||||||||||||    
T  3346 ggtcattgttacttgttcttagtaaaaaaatcaggttttcgggctacttgatcagattgctctgaaacttccccagaaaatcagaaaa 3259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 17 - 307
Target Start/End: Complemental strand, 9654 - 9365
Alignment:
Q  17 aatccgaaaacttcaaaaaataggatgcgctatttgattttttctgattatataattcgaacacctcataaatactctttttcaagggaaaaacacttcg 116  Q
    |||||| |||||||||||||||||| ||| ||  |||| ||| | ||||| ||||| |||| ||| | | || || ||||||||| | |||| || ||||    
T  9654 aatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccgaaaaccccctgaacaccctttttcaaagtaaaa-cagttcg 9556  T
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttc 216  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||| || ||||||||||||| ||||||||| ||  ||||| ||||| |||    
T  9555 gattatataatccgaactgtatcagcataaattctatacatgtttgtaacatggatagtcattttatggacaatattaatatttataactttcatcattc 9456  T
Q  217 tgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcaga 307  Q
    |||||||||||||||||||||||||||| | ||||||| | |||||    ||||||||| ||||  || ||||||| || |||||||||||    
T  9455 tgttttgggtcattgttacatgttcttagttaaaaatcggattttcggattacttgatcggattgctctgaaacttgcctagaaaatcaga 9365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 151 - 310
Target Start/End: Original strand, 140620 - 140779
Alignment:
Q  151 taaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttactcaaa 250  Q
    ||||||||||||||||||  || ||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| |||||    
T  140620 taaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatccttttgttttaggtcattgttacttgttcttagtcaaa 140719  T
Q  251 aatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
    |||| ||||||||   ||||||||| ||||  ||||||||||||||||||||||||||||    
T  140720 aatcgggttttcagactacttgatcggattgctccgaaacttccccagaaaatcagaaaa 140779  T

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Target: scaffold0182 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 23228 - 23303
Alignment:
Q  142 cacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttct 217  Q
    ||||||||| |||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||||||    
T  23228 cacaaattcgaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 23303  T

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Target: scaffold0564 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 310
Target Start/End: Original strand, 4471 - 4665
Alignment:
Q  116 ggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatcctt 215  Q
    ||||||||||||| |||||||||| ||||||||| | ||| ||||||||| ||  || |||||||||  ||  |||||||||||| ||||  ||||| ||    
T  4471 ggattatataatctgaactgtatcggcacaaattttgaacctgtttgtaaaatagatagtcattttaaagaccatattaatcttcttaaccatcatcatt 4570  T
Q  216 ctgttttgggtcattgttacatgttcttactcaaaaatcaggttttcaagatacttgatcagattcttccgaaacttccccagaaaatcagaaaa 310  Q
     |||||  |||||||||||  ||||| || || |||||  ||||||  || || |||||| ||||  ||||||||||  ||||||||||| ||||    
T  4571 atgtttgaggtcattgttagttgttcctagtccaaaatacggtttttgagctatttgatcggattgctccgaaacttggccagaaaatcataaaa 4665  T

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Target: scaffold0006 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 60028 - 59938
Alignment:
Q  117 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactc 207  Q
    |||||||||||  |||||||| ||||||||||| | ||||||||||||||||  || |||||||||  || ||||||||||||||||||||    
T  60028 gattatataatatgaactgtaccagcacaaattttgaacatgtttgtaacatagatagtcattttaaagacaatattaatcttcctaactc 59938  T

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Target: scaffold0006; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 59472 - 59551
Alignment:
Q  128 ccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactc 207  Q
    ||||||| |||||| ||||||| ||||||||||||| ||||| || ||||||||| ||| |||||||||||| |||||||    
T  59472 ccgaactatatcagtacaaattttaaacatgtttgtgacatggatagtcattttaaggacaatattaatctttctaactc 59551  T

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Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 205842 - 205759
Alignment:
Q  139 cagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcctaactctcatccttctgtttt 222  Q
    |||||| |||||| ||||||||||||||||   | ||||||||| ||| |||||||||||||||| || |||||||| ||||||    
T  205842 cagcaccaattctgaacatgtttgtaacattggtagtcattttaaggataatattaatcttcctagctttcatccttgtgtttt 205759  T

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Target: scaffold0466 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 8780 - 8911
Alignment:
Q  102 gggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcc 201  Q
    |||||||||| || |||||||||| || |||| |||||| |||||||  | | | ||||||||||||| || | |||||||||||  |||||| || |||    
T  8780 gggaaaaacattttggattatatattctgaaccgtatcatcacaaatattgagcttgtttgtaacatggatagccattttatggaacatattattcatcc 8879  T
Q  202 taactctcatccttctgttttgggtcattgtta 234  Q
    |||| | ||||||| |||||| | |||||||||    
T  8880 taac-cccatccttgtgttttagatcattgtta 8911  T

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Target: scaffold0091 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 2145 - 2004
Alignment:
Q  93 ctttttcaagggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatat 192  Q
    |||||||| |||||||||| ||| |||||||||||| |||||||||||| | ||||| | |   ||| ||||||||| ||      ||||  ||  ||||    
T  2145 ctttttcaggggaaaaacagttcagattatataatctgaactgtatcagtataaattatgagtttgtctgtaacatggataactggtttaatgaccatat 2046  T
Q  193 taatcttcctaactctcatccttctgttttgggtcattgtta 234  Q
    ||||||||||||||| |||||||||| ||  |||||||||||    
T  2045 taatcttcctaactcacatccttctgattaaggtcattgtta 2004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 230
Target Start/End: Complemental strand, 100986 - 100858
Alignment:
Q  102 gggaaaaacacttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggagaatattaatcttcc 201  Q
    |||||||||| ||| ||||||||||| | | ||||||| | ||| ||| | ||||||||| ||||||  || |||| |||| ||   |||| ||||||||    
T  100986 gggaaaaacagttcagattatataattcaacctgtatcggtacagattttgaacatgtttataacatatatagtcagtttaagggccatatcaatcttcc 100887  T
Q  202 taactctcatccttctgttttgggtcatt 230  Q
    ||||||  ||||||| ||| | |||||||    
T  100886 taactcatatccttccgttctaggtcatt 100858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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