View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18250_low_8 (Length: 258)
Name: NF18250_low_8
Description: NF18250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18250_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 73346 - 73109
Alignment:
| Q |
1 |
agaagttagttagttacttagcccaagcagggtaattgtgaacgcgttcttgttcgcgttcttgtttatcttgtctaattttaagcaatctccgacctct |
100 |
Q |
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| T |
73346 |
agaagttagttagttacttagcccaagcagggtaattgtgaacgcgttcttgttcgcgttgttgtttatcttgtctaattttaagcaatctccgacctct |
73247 |
T |
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| Q |
101 |
agcggtggttcctgatccttttatcgatttatcaatttcaccaccgttggatttggatttggaggatttagagacacaaacaaatacacaagtagtagaa |
200 |
Q |
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| T |
73246 |
agcggtggttcctgatccttttatcgatttatcaatttcaccaccgtttgatttggatttggaggatttagagacacaaacaaatacacaagtagtagaa |
73147 |
T |
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| Q |
201 |
ggactacgcttcagcaccgaagatgaagatgaagatga |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
73146 |
ggactacgcttcagcaccgaagatgaagatgaagatga |
73109 |
T |
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