View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18251_low_15 (Length: 235)
Name: NF18251_low_15
Description: NF18251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18251_low_15 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 41864532 - 41864393
Alignment:
| Q |
21 |
gtggtcaattgggtgaaatgagataaattgtgtttaaatcgtggaaaagatggtacagtggtttgtaaggactaaggtacgtcaatttaacatcatttta |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41864532 |
gtggtcaattgggtgaaatgagataaattgtgtttaaatcgtggaaaagatggtacaggggtttgtaaggactaaggtacgtcaatttaacatcatttta |
41864433 |
T |
|
| Q |
121 |
ttaggtaaccaatattggaggttgagggaggatcaattgg |
160 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41864432 |
ttaggtaaccaatattggaggttgagggaggatcaattgg |
41864393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University