View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18251_low_8 (Length: 386)
Name: NF18251_low_8
Description: NF18251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18251_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 99 - 368
Target Start/End: Complemental strand, 4504450 - 4504181
Alignment:
| Q |
99 |
cattgttcttaaacactcctttctgaaagggaaatgcaaaaggatcatttacataatttttaaactgtctctgaagtttcttttcttctgttatcgccat |
198 |
Q |
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| T |
4504450 |
cattgttcttaaacactcctttctgaaagggaaatgcaaaaggatcatttacataatttttaaactgtctctgaagtttc-tttcttctgttatcgccat |
4504352 |
T |
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| Q |
199 |
ctggatacttgtaacacatagagttgaagaataagattgaagnnnnnnntaaagaaaagttgcaactaagggaagagactctactgaatggaatctctaa |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4504351 |
ctggatacttgtaacacatagagttgaagaataagattgaagaaaaaaataaagaaaagttgcaactaagggaagagactctactgaatggaatctctaa |
4504252 |
T |
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| Q |
299 |
agacattatctg-aaaattgaccaattaactgcttgtgttgtggggccataagggtaactaacatacacat |
368 |
Q |
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|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
4504251 |
agacattatctgaaaaattgaccaattaactgcttgtgttatggggccataagggtaactaacatacacat |
4504181 |
T |
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