View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18251_low_9 (Length: 324)
Name: NF18251_low_9
Description: NF18251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18251_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 46093128 - 46092833
Alignment:
| Q |
1 |
tcaaatatacttaataagtagtagtaatttgttttatgcatatataggatgtgttgtgtggcaaccacacgattgcgtgtggccaaaggaatccacttat |
100 |
Q |
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| T |
46093128 |
tcaaatatacttaataagtagtagtaatttgttttatgcata----ggatgtgt-----ggcaaccacacgatagcgtgtggccaaaggaatccacttat |
46093038 |
T |
|
| Q |
101 |
cctctcaatgatgctcctgtcgtcatacaacagctacatatatcgactatatggcccaactgtctgaattttgtttatactaattatatgctcctttcat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
46093037 |
cctctcaatgatgctcctgtcgtcatacaacagctacatatatcgactatatggcccaagtgtctgaattttgtttatactaattatatgctcctttcat |
46092938 |
T |
|
| Q |
201 |
tgattcgtaaccagaacaagctacgcaacctcacataatcagttaattaacactatatacaaactctattcattgattcaaggaaatggtgataatggat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
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| T |
46092937 |
tgattcgtaaccagaacaagctacgcaacctcacataatcag-taattaacactatatacaaactctattcattgattgaaggaaattgtgataatggat |
46092839 |
T |
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