View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18254_high_10 (Length: 239)
Name: NF18254_high_10
Description: NF18254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18254_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 29178607 - 29178827
Alignment:
| Q |
1 |
tttctaccttttattgatctataactgcacatgttcctcatcttacttaaattcacatatcatatataacaaaataaaaagtctaacacccatgttccat |
100 |
Q |
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| T |
29178607 |
tttctaccttttattgatctataactgcacatgttcctcatcttacttaaattcacatatcatatataacaaaataaaaagtctaacacccatgttccat |
29178706 |
T |
|
| Q |
101 |
ttgacatatttcttttccaatacatactccctctcccacaaatataattcatatcacnnnnnnnnnnnnnnnnnctattttttagatttattgaataact |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |
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| T |
29178707 |
ttgacatatttcttttccaatacatactccctctcccacaaatataattcatatcacaaaaaataaaaataaaactattttttagatttattaaataact |
29178806 |
T |
|
| Q |
201 |
catttatcgagtctgtatata |
221 |
Q |
| |
|
|||||||| |||||||||||| |
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|
| T |
29178807 |
catttatcaagtctgtatata |
29178827 |
T |
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