View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18254_high_7 (Length: 259)
Name: NF18254_high_7
Description: NF18254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18254_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 1372361 - 1372595
Alignment:
| Q |
10 |
gacatcatcaaagccatccatcatgagtaagttcttcttaaagcgcttcagaaaaacattcatttcacgtatgttgcaaccaccattaatattggatgga |
109 |
Q |
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| T |
1372361 |
gacatcatcaaagccatccatcatgagtaagttcttcttaaagcgcttcagaaaaacattcatttcacgtatgttgcaaccaccattaatattggatgga |
1372460 |
T |
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| Q |
110 |
attgtatttattccattaacaacgtcaaattcatcatcccaaccaacaacttatgcatataaccttaggttgtgcggccagtcttctactacctcccatt |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |
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| T |
1372461 |
attgtatttattccattaacaacgtcaaattcatcatcccaaccaacaacttatgcatataaccttaggttgtacggccagtcttctagtacctcccatt |
1372560 |
T |
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| Q |
210 |
tttcctgcaaatccgtaaagaaggcatgaaacata |
244 |
Q |
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||||||||||||| ||||||||||||||||||||| |
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| T |
1372561 |
tttcctgcaaatctgtaaagaaggcatgaaacata |
1372595 |
T |
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