View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18255_high_41 (Length: 245)
Name: NF18255_high_41
Description: NF18255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18255_high_41 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 52725497 - 52725728
Alignment:
| Q |
2 |
tacttgcaacttattcccttcatttccagcaattatcgacagtagaatggccgcaaaagacatatccgagcatgatatcattcaagttagtcttttcccc |
101 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
52725497 |
tacttgcaacttattcccttcatttccagcaattattgacagtagaatggccgcaaaagacatatccaagcatgatatcattcaagttagtcttttcccc |
52725596 |
T |
|
| Q |
102 |
cattcatttacttcatcctttgattagctattgaaaatacaaaattagtatttacattgctgagcttcatattgcttatctgagatatctttgacaccct |
201 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52725597 |
cattcatttacttcatccttagattagctattgaaaatacaaaattagtatttacattgctgagcttcatattgcttatctgagatatctttgacaccct |
52725696 |
T |
|
| Q |
202 |
ttggtaagaaaatccttgtaggcctttagtat |
233 |
Q |
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||||||| |||||||||||| ||||||||||| |
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| T |
52725697 |
ttggtaataaaatccttgtaagcctttagtat |
52725728 |
T |
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