View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18255_low_17 (Length: 409)
Name: NF18255_low_17
Description: NF18255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18255_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 13 - 393
Target Start/End: Complemental strand, 4044369 - 4043988
Alignment:
| Q |
13 |
aatataagagagaatgataatttaaccttattttttcnnnnnnnnnnn-tgataatttaaccttatcaaaaagaagagaatgataatttagatataaatt |
111 |
Q |
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| T |
4044369 |
aatataagagagaatgataatttaaccttattttttcaaaaaaaaaaaatgataatttaaccttatcaaaaagaagagaatgataatttagatataaatt |
4044270 |
T |
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| Q |
112 |
attttcacagaagcaaaacccttctaaagaaagaagccttacctgcttcatttgnnnnnnnctttgggtccaaaacttgcttcatttcttccaaggtaaa |
211 |
Q |
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| T |
4044269 |
attttcacagaagcaaaacccttctaaagaaagaagccttacctgcttcatttgtttttttctttgggtccaaaacttgcttcatttcttccaaggtaaa |
4044170 |
T |
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| Q |
212 |
aattgcaataaatatgggagtgtatgttttcctttctaatttcatattatataacataaaaagcgtaacacaccttaaaattatctcaaaattctctatt |
311 |
Q |
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| T |
4044169 |
aattgcaataaatatgggagtgtatgttttcctttctaatttcatattatataacataaaaagcgtaacacaccttaaaattatctcaaaattctctatt |
4044070 |
T |
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| Q |
312 |
gttttgattttataatctggatagagtgtgatagaagattgaagggttatgaaagaaatactctaactatggatgtacgatg |
393 |
Q |
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| T |
4044069 |
tttttgattttataatttggatagagtgtgatagaagattgaaggcttatgaaagaaacactctaactatggatgtacgatg |
4043988 |
T |
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