View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18255_low_33 (Length: 305)
Name: NF18255_low_33
Description: NF18255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18255_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 8 - 286
Target Start/End: Original strand, 14947069 - 14947349
Alignment:
| Q |
8 |
agcagagaatcaaatgaaatcattgaactactcttttggagacaattatttccaaagttcaatcttgcaacttttggtggtataatcgattttagacatc |
107 |
Q |
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| T |
14947069 |
agcagagaatcaaatgaaatcattgaactactcttttgtagacaattatttccaaagttcaatcttgcaacttttggtggtataatcgattttagacatc |
14947168 |
T |
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| Q |
108 |
caaattccaatgcaagtagaaaaatcaaatacaagcaggcttttgaaatatgcttttcattaatttatttttgggatagaagatgcttttgattc--tat |
205 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
14947169 |
caaagtccaatgcaagtagaaaaatcaaatacaagcaggcttttgaaatatgcttttcattaatttatttttgggatagaagatgcttttgattctatat |
14947268 |
T |
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| Q |
206 |
attaggttttatctagaattagcatcatttttcacatgtatcaacaaaaataactcaatccttatctcttttcttaaagct |
286 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14947269 |
attaggttttatctaggattagcatcatttttcacatgtatcaacaaaaataactcaatccttatctcttttcttaaagct |
14947349 |
T |
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