View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18258_high_13 (Length: 249)
Name: NF18258_high_13
Description: NF18258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18258_high_13 |
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Alignment Details
Target: chr6 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 3226279 - 3226402
Alignment:
| Q |
117 |
gcttataaatgccaaggtcttgagattagtttaatctcttaatgcacaagaccttggtaaagcttataccaatcaaaagcaagtaagtatggaccttggc |
216 |
Q |
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| T |
3226279 |
gcttataaatgccaaggtcttgagattagtttaatctcttaatgcacaagaccttggtaaagcttataccaatcaaaagcaagtaagtatggaccttggc |
3226378 |
T |
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| Q |
217 |
ataatccttggtttgtgttcattt |
240 |
Q |
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|||||||||||||||||||||||| |
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| T |
3226379 |
ataatccttggtttgtgttcattt |
3226402 |
T |
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