View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18259_high_11 (Length: 301)
Name: NF18259_high_11
Description: NF18259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18259_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 16 - 285
Target Start/End: Original strand, 42482192 - 42482462
Alignment:
| Q |
16 |
ataactaactagttaaagatttgcagaaatcagtttaaaaactttt-cttaatatgcatagacctgctttgtgggaatactgcagtatttgagccagttg |
114 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42482192 |
ataactaactagttaaagatttgcagaactcagtttaaaaactttttcttaatatgcatagacctgctttgtgggaatactgcagtatttgagccagttg |
42482291 |
T |
|
| Q |
115 |
aaaaggaacttaattagtagttactaaatactaagttgattgaatgagcacttgagaagaaattgatataactaactgctggttgatgagacatgatata |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42482292 |
aaaaggaacttaattagtagttactaaatactaagttgattgaatgagcacttgagaagaaattgatataactaactgctggttgatgagacatgatata |
42482391 |
T |
|
| Q |
215 |
tggagtacttaggcagcttttgtgtcaccagttgtccttcccaccatttaaaacaaagagagcaacaaaac |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42482392 |
tggagtacttaggcagcttttgtgtcaccagttgtccttcccaccatttaaaacaaagagagcaacaaaac |
42482462 |
T |
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