View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18259_high_3 (Length: 531)

Name: NF18259_high_3
Description: NF18259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18259_high_3
NF18259_high_3
[»] chr3 (42 HSPs)
chr3 (178-515)||(24618646-24618983)
chr3 (4-115)||(24619092-24619203)
chr3 (153-320)||(1923117-1923278)
chr3 (159-317)||(46194123-46194280)
chr3 (153-283)||(1334732-1334861)
chr3 (152-317)||(38600723-38600887)
chr3 (154-289)||(44218979-44219112)
chr3 (182-305)||(36790750-36790872)
chr3 (153-279)||(48409611-48409738)
chr3 (160-317)||(51164986-51165142)
chr3 (226-317)||(30261420-30261509)
chr3 (159-266)||(41287295-41287402)
chr3 (190-317)||(26479785-26479918)
chr3 (226-279)||(9218244-9218297)
chr3 (154-279)||(21296458-21296582)
chr3 (152-284)||(9017827-9017958)
chr3 (225-317)||(17776911-17777002)
chr3 (225-317)||(19078212-19078303)
chr3 (159-279)||(39329705-39329824)
chr3 (224-287)||(2868672-2868734)
chr3 (160-262)||(54021429-54021531)
chr3 (154-282)||(54122176-54122303)
chr3 (237-311)||(39144770-39144845)
chr3 (158-281)||(53051058-53051180)
chr3 (160-263)||(53754034-53754137)
chr3 (159-317)||(5245445-5245602)
chr3 (239-317)||(36315651-36315729)
chr3 (173-263)||(38524263-38524352)
chr3 (159-300)||(32977724-32977864)
chr3 (260-317)||(38215761-38215818)
chr3 (153-317)||(21585327-21585490)
chr3 (152-279)||(42547061-42547187)
chr3 (224-287)||(51636843-51636905)
chr3 (262-300)||(26832197-26832235)
chr3 (249-311)||(34081017-34081079)
chr3 (198-283)||(39866504-39866588)
chr3 (154-279)||(43639471-43639595)
chr3 (244-289)||(47684858-47684903)
chr3 (220-287)||(11529023-11529092)
chr3 (259-299)||(12745094-12745134)
chr3 (152-240)||(31650937-31651024)
chr3 (153-209)||(45819676-45819732)
[»] chr1 (74 HSPs)
chr1 (153-319)||(29756057-29756223)
chr1 (152-317)||(26583754-26583919)
chr1 (355-515)||(29051806-29051966)
chr1 (153-282)||(37541065-37541194)
chr1 (153-317)||(24131318-24131481)
chr1 (159-317)||(26924037-26924195)
chr1 (4-84)||(29051305-29051385)
chr1 (174-317)||(3160604-3160747)
chr1 (159-312)||(46363332-46363486)
chr1 (168-318)||(50926789-50926939)
chr1 (159-283)||(5503453-5503575)
chr1 (153-317)||(29225322-29225489)
chr1 (159-284)||(37925192-37925321)
chr1 (159-312)||(40754336-40754488)
chr1 (168-284)||(16956585-16956701)
chr1 (159-317)||(34813950-34814107)
chr1 (159-317)||(27932746-27932908)
chr1 (153-317)||(4466072-4466235)
chr1 (231-311)||(26760381-26760461)
chr1 (153-287)||(16040104-16040237)
chr1 (159-256)||(31798451-31798546)
chr1 (159-306)||(3718779-3718924)
chr1 (154-317)||(11425787-11425949)
chr1 (183-312)||(14090697-14090822)
chr1 (156-262)||(36232761-36232867)
chr1 (237-317)||(2886323-2886403)
chr1 (159-283)||(10587533-10587656)
chr1 (160-303)||(25983565-25983702)
chr1 (159-281)||(27209921-27210042)
chr1 (159-280)||(705303-705424)
chr1 (182-318)||(36326122-36326257)
chr1 (154-317)||(2219366-2219528)
chr1 (163-282)||(13409730-13409849)
chr1 (182-281)||(28706577-28706675)
chr1 (152-299)||(32348244-32348390)
chr1 (153-262)||(14352593-14352705)
chr1 (224-281)||(4659529-4659585)
chr1 (158-262)||(37495861-37495963)
chr1 (159-287)||(27391380-27391507)
chr1 (233-289)||(34332217-34332272)
chr1 (159-279)||(40061842-40061961)
chr1 (226-282)||(40988450-40988506)
chr1 (224-284)||(49494114-49494173)
chr1 (175-287)||(49944981-49945092)
chr1 (158-282)||(50267391-50267514)
chr1 (158-262)||(51049540-51049643)
chr1 (226-289)||(7224500-7224563)
chr1 (316-355)||(29051382-29051421)
chr1 (152-317)||(29225779-29225942)
chr1 (159-242)||(33149306-33149389)
chr1 (168-284)||(44580558-44580676)
chr1 (160-270)||(45889212-45889322)
chr1 (181-282)||(50773301-50773399)
chr1 (159-217)||(2886204-2886262)
chr1 (160-282)||(21304760-21304880)
chr1 (168-262)||(9590554-9590650)
chr1 (198-287)||(40019831-40019919)
chr1 (159-283)||(32587798-32587921)
chr1 (224-284)||(36467146-36467205)
chr1 (152-287)||(28839365-28839499)
chr1 (225-287)||(5040523-5040584)
chr1 (224-282)||(5442438-5442495)
chr1 (221-283)||(6787342-6787403)
chr1 (158-260)||(12267605-12267707)
chr1 (226-287)||(25418743-25418802)
chr1 (232-289)||(39420692-39420750)
chr1 (234-279)||(2571469-2571514)
chr1 (245-290)||(18186142-18186187)
chr1 (152-280)||(27831872-27831997)
chr1 (220-284)||(37525134-37525195)
chr1 (232-280)||(28424279-28424327)
chr1 (224-287)||(42309528-42309589)
chr1 (161-237)||(46968113-46968189)
chr1 (156-284)||(52830365-52830492)
[»] chr8 (53 HSPs)
chr8 (153-317)||(14689987-14690151)
chr8 (355-485)||(1354819-1354949)
chr8 (159-306)||(8394180-8394329)
chr8 (159-317)||(33743809-33743967)
chr8 (355-472)||(1344627-1344744)
chr8 (159-317)||(14748620-14748780)
chr8 (182-317)||(32231302-32231437)
chr8 (161-284)||(45420888-45421011)
chr8 (168-284)||(1494197-1494313)
chr8 (159-299)||(25174519-25174659)
chr8 (153-299)||(5392076-5392221)
chr8 (159-284)||(886397-886522)
chr8 (153-306)||(8566041-8566191)
chr8 (152-279)||(2195494-2195620)
chr8 (159-306)||(39998196-39998342)
chr8 (152-287)||(42412330-42412464)
chr8 (368-445)||(10043378-10043455)
chr8 (160-281)||(29638335-29638455)
chr8 (154-262)||(14117490-14117598)
chr8 (159-317)||(29451382-29451540)
chr8 (158-281)||(28791340-28791462)
chr8 (160-279)||(40077705-40077823)
chr8 (159-288)||(27868271-27868399)
chr8 (158-311)||(27973609-27973761)
chr8 (158-311)||(28030878-28031030)
chr8 (168-283)||(9734119-9734232)
chr8 (226-317)||(2797139-2797230)
chr8 (152-287)||(7258314-7258448)
chr8 (244-314)||(8840445-8840514)
chr8 (160-278)||(15559086-15559203)
chr8 (153-307)||(37459377-37459521)
chr8 (158-322)||(41726553-41726714)
chr8 (226-317)||(36011909-36012001)
chr8 (13-60)||(1354159-1354206)
chr8 (211-289)||(325028-325105)
chr8 (158-284)||(29615830-29615955)
chr8 (158-256)||(41759607-41759705)
chr8 (228-317)||(2875005-2875094)
chr8 (159-276)||(5423122-5423238)
chr8 (168-280)||(26677115-26677227)
chr8 (159-283)||(139055-139178)
chr8 (159-294)||(11637173-11637308)
chr8 (224-287)||(37703085-37703147)
chr8 (159-262)||(5878196-5878300)
chr8 (202-284)||(12653763-12653844)
chr8 (159-277)||(28802800-28802917)
chr8 (159-239)||(325110-325190)
chr8 (52-84)||(1354105-1354137)
chr8 (233-269)||(10728885-10728921)
chr8 (246-290)||(33890478-33890522)
chr8 (235-287)||(36649664-36649715)
chr8 (222-270)||(44225885-44225933)
chr8 (158-282)||(44790374-44790497)
[»] chr4 (52 HSPs)
chr4 (153-317)||(28330821-28330985)
chr4 (158-306)||(8759811-8759959)
chr4 (153-317)||(20964204-20964368)
chr4 (153-317)||(37315838-37316002)
chr4 (159-280)||(38319944-38320065)
chr4 (159-306)||(32949775-32949923)
chr4 (153-283)||(42132840-42132972)
chr4 (159-284)||(49218732-49218856)
chr4 (159-303)||(53848679-53848823)
chr4 (159-283)||(48400582-48400705)
chr4 (159-283)||(22020462-22020584)
chr4 (156-317)||(25902378-25902539)
chr4 (226-317)||(5499349-5499440)
chr4 (198-317)||(54217441-54217562)
chr4 (159-317)||(22872303-22872462)
chr4 (153-262)||(42051627-42051736)
chr4 (232-303)||(18872585-18872656)
chr4 (159-290)||(47277625-47277756)
chr4 (159-299)||(4360343-4360482)
chr4 (217-317)||(41594764-41594864)
chr4 (152-299)||(33047518-33047664)
chr4 (159-282)||(34790903-34791026)
chr4 (159-300)||(39052835-39052975)
chr4 (155-319)||(28279866-28280029)
chr4 (159-279)||(41436514-41436633)
chr4 (235-311)||(46958828-46958904)
chr4 (224-299)||(8295127-8295201)
chr4 (158-281)||(29550680-29550802)
chr4 (152-287)||(41203763-41203897)
chr4 (245-290)||(36045994-36046039)
chr4 (159-287)||(49448874-49448999)
chr4 (226-282)||(13529961-13530017)
chr4 (152-299)||(42024136-42024282)
chr4 (159-217)||(36047116-36047174)
chr4 (254-311)||(11583647-11583704)
chr4 (152-287)||(40020892-40021029)
chr4 (231-287)||(12619792-12619847)
chr4 (159-287)||(17237076-17237203)
chr4 (159-287)||(38160099-38160226)
chr4 (158-209)||(10099749-10099800)
chr4 (152-311)||(35027420-35027578)
chr4 (159-262)||(35998088-35998191)
chr4 (152-287)||(41710091-41710225)
chr4 (244-282)||(1920846-1920884)
chr4 (154-279)||(25149479-25149604)
chr4 (159-280)||(54729434-54729558)
chr4 (162-263)||(13719811-13719912)
chr4 (160-257)||(49306621-49306718)
chr4 (156-269)||(49401686-49401798)
chr4 (224-280)||(28974404-28974459)
chr4 (244-289)||(38838740-38838787)
chr4 (224-288)||(52676977-52677040)
[»] chr2 (49 HSPs)
chr2 (153-317)||(13222095-13222259)
chr2 (154-317)||(314455-314618)
chr2 (159-312)||(6972462-6972614)
chr2 (159-317)||(4282934-4283093)
chr2 (168-306)||(928466-928603)
chr2 (159-283)||(2048325-2048448)
chr2 (152-283)||(43950399-43950529)
chr2 (158-283)||(9724910-9725034)
chr2 (153-324)||(37528981-37529151)
chr2 (153-287)||(2427387-2427521)
chr2 (153-288)||(38872867-38873000)
chr2 (159-306)||(7213508-7213654)
chr2 (152-315)||(43427005-43427167)
chr2 (158-281)||(24356143-24356265)
chr2 (237-299)||(5425969-5426031)
chr2 (159-289)||(10069530-10069659)
chr2 (171-282)||(38280148-38280258)
chr2 (158-279)||(18181168-18181288)
chr2 (160-247)||(31348545-31348632)
chr2 (158-320)||(39166606-39166771)
chr2 (220-287)||(45464162-45464228)
chr2 (153-255)||(1908472-1908574)
chr2 (159-281)||(18460521-18460642)
chr2 (159-281)||(36748181-36748302)
chr2 (153-280)||(3199925-3200049)
chr2 (211-288)||(14384057-14384133)
chr2 (159-279)||(31592583-31592703)
chr2 (159-299)||(9472455-9472594)
chr2 (224-287)||(32556270-32556330)
chr2 (152-282)||(2756700-2756829)
chr2 (224-306)||(6213778-6213859)
chr2 (182-282)||(14890373-14890470)
chr2 (227-287)||(883100-883159)
chr2 (224-283)||(8550593-8550651)
chr2 (171-290)||(12949908-12950026)
chr2 (224-287)||(28527062-28527124)
chr2 (224-283)||(40965112-40965170)
chr2 (224-287)||(44736964-44737026)
chr2 (168-282)||(3123688-3123801)
chr2 (234-280)||(5007194-5007240)
chr2 (196-282)||(43077678-43077763)
chr2 (244-294)||(44024825-44024875)
chr2 (159-257)||(44424241-44424337)
chr2 (224-284)||(435026-435087)
chr2 (221-317)||(10394202-10394295)
chr2 (259-300)||(14306031-14306072)
chr2 (224-289)||(39159717-39159780)
chr2 (224-289)||(39209414-39209477)
chr2 (181-269)||(39807268-39807355)
[»] chr6 (22 HSPs)
chr6 (153-306)||(15371791-15371943)
chr6 (159-317)||(15325180-15325337)
chr6 (159-306)||(15321153-15321299)
chr6 (159-304)||(15355608-15355752)
chr6 (159-317)||(34803621-34803781)
chr6 (158-317)||(33921386-33921544)
chr6 (159-306)||(15351311-15351457)
chr6 (161-263)||(3166078-3166180)
chr6 (152-304)||(31075854-31076005)
chr6 (160-263)||(3874020-3874123)
chr6 (153-284)||(4552936-4553059)
chr6 (233-317)||(16126318-16126402)
chr6 (154-282)||(3604552-3604679)
chr6 (224-284)||(15081521-15081580)
chr6 (220-284)||(33109467-33109530)
chr6 (181-268)||(20027637-20027724)
chr6 (221-287)||(7739465-7739530)
chr6 (226-312)||(20383944-20384030)
chr6 (154-280)||(31265807-31265932)
chr6 (153-219)||(33017958-33018024)
chr6 (168-300)||(9354374-9354505)
chr6 (168-317)||(34703643-34703792)
[»] chr7 (46 HSPs)
chr7 (153-317)||(32776010-32776174)
chr7 (158-317)||(29996945-29997104)
chr7 (163-313)||(47238254-47238404)
chr7 (153-317)||(37264340-37264502)
chr7 (159-283)||(32971968-32972092)
chr7 (163-283)||(23111039-23111159)
chr7 (159-267)||(10355701-10355809)
chr7 (153-249)||(38589761-38589857)
chr7 (168-303)||(8150001-8150135)
chr7 (158-281)||(45218111-45218233)
chr7 (159-281)||(2849288-2849409)
chr7 (226-312)||(33773965-33774051)
chr7 (159-288)||(43007927-43008057)
chr7 (153-281)||(30659433-30659560)
chr7 (159-282)||(9602894-9603017)
chr7 (159-282)||(9830465-9830588)
chr7 (159-317)||(34064248-34064405)
chr7 (175-288)||(6697130-6697242)
chr7 (168-284)||(21446478-21446594)
chr7 (227-306)||(39143601-39143680)
chr7 (202-324)||(27621913-27622035)
chr7 (159-269)||(36070138-36070247)
chr7 (226-282)||(9658937-9658993)
chr7 (224-299)||(11616660-11616733)
chr7 (153-237)||(18731466-18731550)
chr7 (203-287)||(45890805-45890888)
chr7 (160-262)||(39343644-39343744)
chr7 (217-282)||(5724660-5724724)
chr7 (154-282)||(7425829-7425957)
chr7 (205-289)||(36194599-36194684)
chr7 (159-279)||(3667832-3667951)
chr7 (386-442)||(13590862-13590918)
chr7 (159-288)||(14648862-14648993)
chr7 (159-242)||(24288456-24288539)
chr7 (152-287)||(29257573-29257707)
chr7 (159-282)||(37490570-37490692)
chr7 (221-289)||(39498768-39498838)
chr7 (224-299)||(44604413-44604487)
chr7 (237-275)||(37496354-37496392)
chr7 (224-281)||(23058916-23058972)
chr7 (259-300)||(31549556-31549597)
chr7 (152-257)||(33584589-33584694)
chr7 (227-284)||(49100453-49100509)
chr7 (224-284)||(30463114-30463173)
chr7 (244-288)||(32346635-32346679)
chr7 (160-312)||(40023649-40023800)
[»] chr5 (43 HSPs)
chr5 (160-317)||(5147413-5147570)
chr5 (159-317)||(38978937-38979095)
chr5 (153-300)||(13016298-13016444)
chr5 (159-317)||(15564810-15564963)
chr5 (159-300)||(13087676-13087816)
chr5 (153-319)||(5357733-5357898)
chr5 (161-283)||(42818938-42819060)
chr5 (169-305)||(4194975-4195112)
chr5 (159-304)||(31090337-31090482)
chr5 (154-317)||(16926006-16926171)
chr5 (153-317)||(39060340-39060503)
chr5 (153-306)||(25111078-25111229)
chr5 (153-306)||(25170169-25170320)
chr5 (159-319)||(31196352-31196512)
chr5 (152-283)||(11099429-11099559)
chr5 (153-306)||(25108600-25108751)
chr5 (153-306)||(25167692-25167843)
chr5 (160-317)||(39060868-39061028)
chr5 (159-256)||(15898224-15898321)
chr5 (157-218)||(7871344-7871405)
chr5 (153-301)||(35988661-35988808)
chr5 (154-282)||(42575591-42575718)
chr5 (158-280)||(4044433-4044553)
chr5 (159-289)||(6172926-6173055)
chr5 (160-289)||(7311128-7311254)
chr5 (153-281)||(36006849-36006973)
chr5 (239-312)||(6629318-6629391)
chr5 (163-317)||(35666922-35667073)
chr5 (259-317)||(22983076-22983134)
chr5 (244-317)||(792095-792168)
chr5 (203-287)||(41594795-41594878)
chr5 (224-287)||(858433-858495)
chr5 (224-283)||(3725284-3725342)
chr5 (254-317)||(15898605-15898668)
chr5 (232-283)||(25344692-25344742)
chr5 (232-271)||(35012812-35012851)
chr5 (168-263)||(35968762-35968857)
chr5 (224-287)||(42211427-42211489)
chr5 (239-289)||(39212500-39212550)
chr5 (156-288)||(4475276-4475405)
chr5 (158-287)||(33988232-33988360)
chr5 (175-255)||(39035834-39035914)
chr5 (224-284)||(41184758-41184817)
[»] scaffold0576 (1 HSPs)
scaffold0576 (159-304)||(598-742)
[»] scaffold0221 (1 HSPs)
scaffold0221 (160-306)||(10717-10864)
[»] scaffold0155 (1 HSPs)
scaffold0155 (193-317)||(7838-7960)
[»] scaffold0262 (1 HSPs)
scaffold0262 (160-284)||(12385-12509)
[»] scaffold0034 (1 HSPs)
scaffold0034 (224-299)||(98923-98997)
[»] scaffold0003 (1 HSPs)
scaffold0003 (158-282)||(352415-352536)
[»] scaffold0578 (1 HSPs)
scaffold0578 (234-280)||(4438-4484)
[»] scaffold0321 (1 HSPs)
scaffold0321 (167-284)||(9503-9618)
[»] scaffold0086 (1 HSPs)
scaffold0086 (159-280)||(5851-5969)
[»] scaffold0007 (1 HSPs)
scaffold0007 (181-247)||(158068-158134)
[»] scaffold0058 (1 HSPs)
scaffold0058 (224-280)||(14554-14609)
[»] scaffold0009 (1 HSPs)
scaffold0009 (237-317)||(220132-220212)


Alignment Details
Target: chr3 (Bit Score: 302; Significance: 1e-170; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 178 - 515
Target Start/End: Complemental strand, 24618983 - 24618646
Alignment:
Q  178 ttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtga 277  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24618983 ttgtatttatgctaaagaagaatacaccactagttgataaaggcacttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtga 24618884  T
Q  278 aatgagcaaaaggttcagttaaaatgggagggaggaagtacttttttgggcaattaaacgttttaggacttgaatatttgagaggacaccctaaatctaa 377  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24618883 aacgagcaaaaggttcagttaaaatgggagggagaaagtacttttttgggcaattaaacgttataggacttgaatatttgagaggacaccctaaatctaa 24618784  T
Q  378 agcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtgactactaattatgaattttctaattacctctg 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||     
T  24618783 agcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatcagaaacaaagtgactactaattatgaattttctaattacctcta 24618684  T
Q  478 gaaaactttgtaaatttgagaattattaacattgagaa 515  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24618683 gaaaactttgtaaatttgagaattattaacattgagaa 24618646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 24619203 - 24619092
Alignment:
Q  4 tattaggaacagaacaatttggttcctttttctaatgcaactttgaatggctgcaaaatgactagctgaaaaaattgtactccctccgtctcatactaac 103  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24619203 tattaggaacagagcaatttggttcctttttctaatgcaactttgaatggctgcaaaatgactagctgaaaaaattgtactccctccgtctcatactaac 24619104  T
Q  104 cgagtcatttgc 115  Q
     |||||||||||    
T  24619103 tgagtcatttgc 24619092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 153 - 320
Target Start/End: Original strand, 1923117 - 1923278
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||| ||| |||||| ||||||||| ||||    |||||||||||||||   ||||||||    
T  1923117 cactcccaattcaatatattctactttgcatttatgataaagaagaatgcaccaacagttgataagggcac---aaaccatttttctctt--tttcactt 1923211  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtactt 320  Q
    |||||||||||||||||||||||||||||||| || || ||||||||||||||| ||||| |||||||    
T  1923212 atacactttttcttaataagtgtgaaatgagc-aagggctcagttaaaatgggacggagggagtactt 1923278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 46194280 - 46194123
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| |||||| || | |||||| ||||||||| |||| | ||| ||||||||||||| |||| ||||||||||    
T  46194280 caattcaatatattctactttgcatttatgataaagagaa-tgcaccaacagttgataagggcactcaaacccatttttctctctctttaacttatacac 46194182  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||||||||||||||||||| ||  || || ||||||||| ||||| ||||| ||||    
T  46194181 tttttcttaataagtgtgaaattagtcaagggctcagttaaattgggacggagggagta 46194123  T

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Target: chr3; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 1334861 - 1334732
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||||||||||||| ||||  ||||||||||| |||||| ||    
T  1334861 cactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaggcattcaaaattatttttctctctctttcattt 1334762  T
Q  253 atacactttttcttaataagtgtgaaatgag 283  Q
    |||| | ||||||||||  ||||||||||||    
T  1334761 atacgc-ttttcttaatctgtgtgaaatgag 1334732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 317
Target Start/End: Complemental strand, 38600887 - 38600723
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||| ||||| ||||| ||||||  ||||||| ||||||| ||| |||||||| |||||||||| | | |||| ||||||||||||  ||||| |    
T  38600887 tcactcccagttcaatatattatactttacatttatggtaaagaagaatgcaccaatacttgataaagggactcaaaatcatttttctctctttttcatt 38600788  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||| ||||||||||  ||| |||||||| ||| ||| || ||||| ||||| ||||| ||||    
T  38600787 tatacac-ttttcttaatctgtgcgaaatgagaaaatggtccaattaaactgggatggagggagta 38600723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 44219112 - 44218979
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 253  Q
    ||||||||||||| ||||||||||||||||||||| ||| |   ||| |||||| | ||    ||| || | ||||||||||||||||  |||| |||||    
T  44219112 acttccaattcaatatattctactttgtatttatgataatggggaatgcaccaacacttac--aagacactcaaaaccatttttctctttctttgactta 44219015  T
Q  254 tacactttttcttaataagtgtgaaatgagcaaaag 289  Q
    ||||||||||||||||| ||||||||||| ||||||    
T  44219014 tacactttttcttaatatgtgtgaaatgaacaaaag 44218979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 182 - 305
Target Start/End: Complemental strand, 36790872 - 36790750
Alignment:
Q  182 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 281  Q
    ||||||| ||||||| ||||||||||||||||||||  ||  | |||  |||||||||||| |||||||||||||| ||||| ||||||| ||| |||||    
T  36790872 atttatgataaagaagaatacaccaatagttgataagtgcgctcaaactcatttttctctctctttcacttatacaattttttttaataaatgtaaaatg 36790773  T
Q  282 agcaaaaggttcagttaaaatggg 305  Q
    ||   |||| ||||||||||||||    
T  36790772 ag-tcaaggctcagttaaaatggg 36790750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 279
Target Start/End: Original strand, 48409611 - 48409738
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaacca--tttttctctccctttcac 250  Q
    |||| ||||||||||||||||||||||  ||||||| ||||||| ||| |||||||| |||| |||| || | ||||| |  ||| |||||| ||||||     
T  48409611 cactcccaattcaacatattctactttacatttatgataaagaagaatccaccaatacttgacaaagacactcaaaacaatctttctctctctctttcat 48409710  T
Q  251 ttatacactttttcttaataagtgtgaaa 279  Q
    ||||||| |||||||||||| ||||||||    
T  48409711 ttataca-tttttcttaatatgtgtgaaa 48409738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 160 - 317
Target Start/End: Original strand, 51164986 - 51165142
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| ||||||||| || | ||||  ||||||||||| |||| | ||||||||     
T  51164986 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaagacactcaaaattatttttctctctcttttatttatacac- 51165084  T
Q  260 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||  ||||||||| || ||| || ||| ||||| | ||| ||||| ||||    
T  51165085 ttttcttaatttgtgtgaaatcagaaaatggctcaattaaactcggacggagggagta 51165142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 30261509 - 30261420
Alignment:
Q  226 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||| ||||||||||| ||||||||||  |||| |||||||||| | ||||||||| ||||||| ||||||||||||||| ||||| ||||    
T  30261509 aaaactatttttctctctctttcactta--cactctttcttaatatgcgtgaaatgaacaaaaggctcagttaaaatgggacggagggagta 30261420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 266
Target Start/End: Original strand, 41287295 - 41287402
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| |||| ||||  | | ||||||||||||||||| ||||||||||||||     
T  41287295 caattcaatatattctactttacatttatgataaagaataatgcatcaatacttgacaaagatagtcaaaaccatttttctctctctttcacttatacat 41287394  T
Q  259 tttttctt 266  Q
     |||||||    
T  41287395 gttttctt 41287402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 190 - 317
Target Start/End: Complemental strand, 26479918 - 26479785
Alignment:
Q  190 taaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcac------ttatacactttttcttaataagtgtgaaatgag 283  Q
    ||||||| ||| ||||||||||||||||| ||||| |||||||| | |||||| ||  |||      ||||| ||||||||||||||||||||||||||     
T  26479918 taaagaagaatgcaccaatagttgataaatgcattcaaaaccatctctctctctctcacacacacacttatatactttttcttaataagtgtgaaatgaa 26479819  T
Q  284 caaaaggttcagttaaaatgggagggaggaagta 317  Q
    | || || |||||||||||| |  ||||||||||    
T  26479818 ccaagggctcagttaaaatgaggcggaggaagta 26479785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 9218244 - 9218297
Alignment:
Q  226 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaa 279  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  9218244 aaaactatttttctctctctttcacttatacactttttcttaatatgtgtgaaa 9218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 279
Target Start/End: Complemental strand, 21296582 - 21296458
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 253  Q
    ||||||||||||| ||||||||||||| ||||||| ||  ||||||| |||||||| || | ||  |||||||||| |||||| ||||| | |||| |||    
T  21296582 acttccaattcaatatattctactttgcatttatgatagtgaaaaatgcaccaatacttaacaagagcatttaaaatcattttcctctctccttcattta 21296483  T
Q  254 tacactttttcttaataagtgtgaaa 279  Q
    |||| ||| ||||| || ||||||||    
T  21296482 taca-tttgtcttagtatgtgtgaaa 21296458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 152 - 284
Target Start/End: Original strand, 9017827 - 9017958
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||||||||||||| |||||  |||||| ||||||  ||  | | ||| |||||||| || | ||| ||| ||||||| ||||||||||| |||||| |    
T  9017827 tcacttccaattcaatatatttcactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaactatttttctctctctttcatt 9017926  T
Q  252 tatacactttttcttaataagtgtgaaatgagc 284  Q
    |||||| ||||| |||||| |||||||||||||    
T  9017927 tataca-ttttttttaatatgtgtgaaatgagc 9017958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 317
Target Start/End: Complemental strand, 17777002 - 17776911
Alignment:
Q  225 taaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||||||||||||||| | |||| ||||||| ||||| |||||| |||||||||||||||| |  ||||||||  ||||| ||||||||||    
T  17777002 taaaaccatttttctctctcattcatttatacatttttt-ttaatacgtgtgaaatgagcaaatgactcagttaatctgggacggaggaagta 17776911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 317
Target Start/End: Complemental strand, 19078303 - 19078212
Alignment:
Q  225 taaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||||||||||||||| | |||| ||||||| ||||| |||||| |||||||||||||||| |  ||||||||  ||||| ||||||||||    
T  19078303 taaaaccatttttctctctcattcatttatacatttttt-ttaatacgtgtgaaatgagcaaatgactcagttaatctgggacggaggaagta 19078212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 279
Target Start/End: Complemental strand, 39329824 - 39329705
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| |||  || ||| |||||||| || | || | |||| ||||| |||| ||| || ||||||||||||||     
T  39329824 caattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaa-gacattcaaaactatttatctttctctttcacttatacat 39329726  T
Q  259 tttttcttaataagtgtgaaa 279  Q
    |||||||||||| ||||||||    
T  39329725 tttttcttaatatgtgtgaaa 39329705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 2868672 - 2868734
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||||||||||||||||| | |||| ||||||| |||||||||||| ||||||||||||||||    
T  2868672 ttaaaaccatttttctctctccttcatttataca-tttttcttaatatgtgtgaaatgagcaaa 2868734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 54021531 - 54021429
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| ||||||||||||  ||||||  ||||||| ||| || ||||| ||||||||| || | |||| |||||||||||| |||| | |||||||||    
T  54021531 aattcaatatattctactttacatttataataaagaagaatgcaacaatatttgataaagacactcaaaatcatttttctctctcttttatttatacact 54021432  T
Q  260 ttt 262  Q
    |||    
T  54021431 ttt 54021429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 54122303 - 54122176
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 253  Q
    ||||||||||||| |||||  |||||| ||||||| ||  | | ||| |||||||| || | |||  |||||||||| ||||||||||| | |||| |||    
T  54122303 acttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaaaaacatttaaaactatttttctctctccttcattta 54122204  T
Q  254 tacactttttcttaataagtgtgaaatga 282  Q
    |||| ||| |||||||| |||||||||||    
T  54122203 taca-tttgtcttaatatgtgtgaaatga 54122176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 39144770 - 39144845
Alignment:
Q  237 tctctccctttcacttatacactttt-tcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 311  Q
    |||||| |||||||||||||| |||| |||||||| ||||||||||| ||||||| ||| ||| ||||||| ||||    
T  39144770 tctctctctttcacttatacatttttttcttaatatgtgtgaaatgaacaaaaggctcacttataatgggatggag 39144845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 53051058 - 53051180
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||| ||||||  ||||||| |||| || ||| ||| |||| |||| ||||||| | ||||| ||||||||||| ||||   |||||||    
T  53051058 ccaattcaatatattatactttacatttatgataaacaagaatgcacaaatacttgaaaaaggcactcaaaactatttttctctctctttactttataca 53051157  T
Q  258 ctttttcttaataagtgtgaaatg 281  Q
    | ||||||||||  ||||||||||    
T  53051158 c-ttttcttaatctgtgtgaaatg 53051180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 263
Target Start/End: Complemental strand, 53754137 - 53754034
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| ||   |||| || | |||| ||||||||||||  ||||| |||||||||    
T  53754137 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaccaaagacactcaaaatcatttttctctctatttcatttatacact 53754038  T
Q  260 tttt 263  Q
    ||||    
T  53754037 tttt 53754034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 5245445 - 5245602
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||| |||||||||||||| ||  | | |||||||||||| || | ||  ||| ||||||| ||||||||||| | ||||  ||||||     
T  5245445 caattcaatatattccactttgtatttatgatattggagaatacaccaatacttaacaagagcacttaaaactatttttctctctccttcatgtataca- 5245543  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||| |||||||| || |||  |||||||| || ||||||||  ||||| ||||| ||||    
T  5245544 tttgtcttaatatgtatgatttgagcaaatggctcagttaatctgggacggagggagta 5245602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 317
Target Start/End: Complemental strand, 36315729 - 36315651
Alignment:
Q  239 tctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||| |||| |||||||||||||||||||||| ||||| ||||||||||| | | ||||| ||| ||| ||||| ||||    
T  36315729 tctctcttttacttatacactttttcttaatatgtgtggaatgagcaaaaagcttagttataataggacggagggagta 36315651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 263
Target Start/End: Complemental strand, 38524352 - 38524263
Alignment:
Q  173 ctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacacttttt 263  Q
    |||||||||||||||| | | |||||||||| ||||| ||||||||  |||| ||||| |||||||| |  |||||||||||||| |||||    
T  38524352 ctactttgtatttatgatgatgaaaaatacatcaatacttgataaa-acattcaaaactatttttctttttctttcacttatacatttttt 38524263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 32977864 - 32977724
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||  ||  ||||||| ||||||||||| || ||||| |||| ||| ||| | ||||| ||||||||| | ||||   ||||||||    
T  32977864 caattcaatatattctaaattacatttatgataaagaaaaatgcatcaatacttgaaaaatgcactcaaaactatttttctccctctttactttatacac 32977765  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 300  Q
     ||||||||||  |||||||||||  ||| || |||||||||    
T  32977764 -ttttcttaatccgtgtgaaatgaaaaaatggctcagttaaa 32977724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 317
Target Start/End: Complemental strand, 38215818 - 38215761
Alignment:
Q  260 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||| |||||||||||||||||||||| |||| ||||| || || ||||||||||    
T  38215818 ttttctttataagtgtgaaatgagcaaaagattcatttaaattgagacggaggaagta 38215761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 21585490 - 21585327
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||| ||| |||||||| |||  ||||||| ||||||| |||  ||||||| || | |||| || | |||| |||||||||||  | ||||||     
T  21585490 cacttccaatacaatatattctattttacatttatgataaagaagaatgaaccaataattaacaaagacactcaaaatcatttttctctgtccttcacta 21585391  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||| | ||||||| ||||| |||| |||||| |||  | ||| ||||| ||||||||||| ||||    
T  21585390 atata-tttttctcaataaatgtggaatgagtaaattgctcaattaaattgggagggagggagta 21585327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 279
Target Start/End: Complemental strand, 42547187 - 42547061
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| |||||||  |||| ||||||| |||  || ||| |||||||| || | || | |||| ||||| |||||| |||| |||| |||    
T  42547187 tcactcccaattcaatatattctcttttgcatttatgataagaaagaatgcaccaatacttaacaa-gacattcaaaactatttttttctctcttttact 42547089  T
Q  252 tatacactttttcttaataagtgtgaaa 279  Q
    |||| | |||||||||||| ||||||||    
T  42547088 tataaattttttcttaatatgtgtgaaa 42547061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 287
Target Start/End: Complemental strand, 51636905 - 51636843
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||||||||||||||||| | |||||||| ||| ||||||||||||| | |||||||| ||||    
T  51636905 ttaaaaccatttttctctctccttcacttaaaca-tttttcttaataattatgaaatgaacaaa 51636843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 26832197 - 26832235
Alignment:
Q  262 ttcttaataagtgtgaaatgagcaaaaggttcagttaaa 300  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  26832197 ttcttaataagtgtgaattgagcaaaaggctcagttaaa 26832235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 34081079 - 34081017
Alignment:
Q  249 acttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 311  Q
    |||||||||||||||||||||| |||| |||| | |||||| ||  |||||||||||| ||||    
T  34081079 acttatacactttttcttaatatgtgtaaaataaacaaaagtttgggttaaaatgggatggag 34081017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 283
Target Start/End: Complemental strand, 39866588 - 39866504
Alignment:
Q  198 aatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 283  Q
    |||||||||||| || | |||  || ||||||| ||||||||||  | |||| ||||||| |||||||||||| ||||||||||||    
T  39866588 aatacaccaatacttaacaaaatcacttaaaactatttttctctttccttcatttataca-tttttcttaatatgtgtgaaatgag 39866504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 279
Target Start/End: Complemental strand, 43639595 - 43639471
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 253  Q
    ||||||||||||| |||||  |||||| ||||||| ||  | ||||| || ||||| || | ||  ||| ||||||||||||||||||| | |||| |||    
T  43639595 acttccaattcaatatatttcactttgcatttatgatagtggaaaatgcatcaatacttaacaacagcacttaaaaccatttttctctctccttcattta 43639496  T
Q  254 tacactttttcttaataagtgtgaaa 279  Q
    || | ||| |||||||| ||||||||    
T  43639495 tata-tttgtcttaatatgtgtgaaa 43639471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 47684858 - 47684903
Alignment:
Q  244 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 289  Q
    ||||||||| ||||| ||||||||||| ||||||||||| ||||||    
T  47684858 ctttcacttgtacaccttttcttaatatgtgtgaaatgaacaaaag 47684903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 11529092 - 11529023
Alignment:
Q  220 gcatttaaaaccattttt---ctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||||||||||||||||   ||||  |||||| ||||| | |||||||||||| ||||||||||||||||    
T  11529092 gcatttaaaaccattttttttctctttctttcatttatata-tttttcttaatatgtgtgaaatgagcaaa 11529023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 12745094 - 12745134
Alignment:
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  12745094 tttttcttaatatgtgtgaaatgagcaaaagactcagttaa 12745134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 31650937 - 31651024
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctc 240  Q
    |||||| ||||| || |||||||| |||||||||||| ||| ||||||| ||| |||| ||||  ||| || |||||| ||||||||||    
T  31650937 tcactttcaatttaatatattctaatttgtatttatgataatgaaaaatgcacaaatacttga-caagacacttaaaatcatttttctc 31651024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 45819676 - 45819732
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaata 209  Q
    ||||| |||||||||||||| |||||| |||||||| ||| || ||||| |||||||    
T  45819676 cactttcaattcaacatattttactttttatttatgataatgataaataaaccaata 45819732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 1e-48; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 153 - 319
Target Start/End: Complemental strand, 29756223 - 29756057
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||| | ||| ||||||||||||| |||||||||    
T  29756223 cactcccaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcactt 29756124  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtact 319  Q
    |||||||||||||||||||||||||||||||| || || || |||||||||||| ||||| ||||||    
T  29756123 atacactttttcttaataagtgtgaaatgagccaagggctccgttaaaatgggacggagggagtact 29756057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 152 - 317
Target Start/End: Original strand, 26583754 - 26583919
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| |||||||| |||| ||||||| ||||||| ||| ||||||||||||||||||||| | |||  |||||||||||| ||||||||    
T  26583754 tcactcccaattcaatatattctattttgcatttatgataaagaagaatgcaccaatagttgataaaggcactcaaactcatttttctctctctttcact 26583853  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||||| ||||| ||||    
T  26583854 tatacactttttcttaataagtgtgaaatgagtcaagggttcagttaaaatgggacggagggagta 26583919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 355 - 515
Target Start/End: Original strand, 29051806 - 29051966
Alignment:
Q  355 ttgagaggacaccctaaatctaaagcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtgactactaat 454  Q
    |||| ||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  29051806 ttgaaaggacacccaaaatctaaagcactttcatgatttcatcaatctggtccttagagaaattaacataacaatgatcagaaacaaagtgactactaat 29051905  T
Q  455 tatgaattttctaattacctctggaaaactttgtaaatttgagaattattaacattgagaa 515  Q
    ||||||||||| |||||| | | ||||||||   ||||||||| |||  ||||||||||||    
T  29051906 tatgaattttcaaattacatatagaaaacttcacaaatttgagcatttctaacattgagaa 29051966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 37541194 - 37541065
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||||||| ||||||||||||  ||||||  ||||||| ||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||    
T  37541194 cacttccaattcaatatattctactttacatttataataaagaagaatgcaccaatagttgataaagacattcaaaaccatttttctctctctttcactt 37541095  T
Q  253 atacactttttcttaataagtgtgaaatga 282  Q
    ||||||||||||||||||||||||||||||    
T  37541094 atacactttttcttaataagtgtgaaatga 37541065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 24131481 - 24131318
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| ||||| ||||||| ||||||| ||||||| ||| |||| ||||||||||| |||||| ||||||||||||||||  |||||||||    
T  24131481 cactcccaattcaatatattatactttgcatttatgataaagaagaatgcacctatagttgataagggcattcaaaaccatttttctct--ctttcactt 24131384  T
Q  253 atacactttttcttaataagtgtgaaatgag-caaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||| |||||||||||||||||||||||||| |||| |  ||||||||||||||| ||||| ||||    
T  24131383 atacgctttttcttaataagtgtgaaatgagtcaaatgactcagttaaaatgggacggagggagta 24131318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 26924195 - 26924037
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||| ||||||| ||||||| ||||||| ||| |||||||||||||||| |||| | |||  |||||||||||| ||||||||| |||||    
T  26924195 caattcaatatattatactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaactcatttttctctctctttcacttttacac 26924096  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||||||||||||||||||||||| ||  | |||||||||| |||| ||||| ||||    
T  26924095 tttttcttaataagtgtgaaatgagccaagagctcagttaaaacgggacggagggagta 26924037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 29051305 - 29051385
Alignment:
Q  4 tattaggaacagaacaatttggttcctttttctaatgcaactttgaatggctgcaaaatgactagctgaaaaaattgtact 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29051305 tattaggaacagaacaatttggttcctttttctaatgcaactttgaatggctgcaaaatgactagctgaaaaaattctact 29051385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 174 - 317
Target Start/End: Complemental strand, 3160747 - 3160604
Alignment:
Q  174 tactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagt 273  Q
    ||||||| ||||||| ||||||| ||| ||||||||||||| || |||| | ||| |||||||||| || ||||||||||||||||||||||||||||||    
T  3160747 tactttgcatttatgataaagaataatgcaccaatagttgacaagggcactcaaacccatttttctttctctttcacttatacactttttcttaataagt 3160648  T
Q  274 gtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||  || || ||||||||||||||| ||||| ||||    
T  3160647 gtgaaatgagtcaagggctcagttaaaatgggacggagggagta 3160604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 159 - 312
Target Start/End: Complemental strand, 46363486 - 46363332
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaag-gcatttaaaaccatttttctctccctttcacttataca 257  Q
    |||||||| ||||| ||||||| ||||||| ||||||| ||| |||||||||||||||||| ||| | |||  ||||| |||||| || |||||||||||    
T  46363486 caattcaatatattttactttgcatttatgataaagaagaatgcaccaatagttgataaagtgcactcaaacacatttctctctctctctcacttataca 46363387  T
Q  258 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 312  Q
    ||||||||||||||||||||||||||  ||||| ||| ||||||| ||| |||||    
T  46363386 ctttttcttaataagtgtgaaatgagtgaaaggctcaattaaaattggacggagg 46363332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 318
Target Start/End: Original strand, 50926789 - 50926939
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 267  Q
    ||||||||||||  ||||||| ||||||| ||| |||||||| |||| ||| ||||| ||||||||||||||||| ||||  |||||||| |||||||||    
T  50926789 atattctactttacatttatgataaagaagaatgcaccaatacttgacaaatgcattcaaaaccatttttctctctctttttcttatacaatttttctta 50926888  T
Q  268 ataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtac 318  Q
    |||  ||||||||||| |||| | |||||||||||| || ||||| |||||    
T  50926889 atatatgtgaaatgagaaaaaagctcagttaaaatgagacggagggagtac 50926939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 5503453 - 5503575
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||| ||||||| ||| ||| ||||||| ||| |||||||||||||||| || |  |||||||||||||||||||  |||| ||||||||    
T  5503453 caattcaatatattatactttgaattaatgataaagaagaatgcaccaatagttgataagggtacctaaaaccatttttctctcc--ttcatttatacac 5503550  T
Q  259 tttttcttaataagtgtgaaatgag 283  Q
    |||||||||||||||||||||||||    
T  5503551 tttttcttaataagtgtgaaatgag 5503575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 29225489 - 29225322
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||||||| ||||||||||||  ||||||| |||| || ||| |||||||| || | ||||||| | |||| |||||||||| | |||||||||    
T  29225489 cacttccaattcaatatattctactttccatttatgataaaaaagaatgcaccaatacttaacaaaggcactcaaaatcatttttctcactctttcactt 29225390  T
Q  253 a---tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |   ||||||||||||||||| ||||||||||||||||||  ||| ||| ||||||| ||||| ||||    
T  29225389 atactacactttttcttaatatgtgtgaaatgagcaaaagactcaattataatgggacggagggagta 29225322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 37925321 - 37925192
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttc----tctccctttcacttat 254  Q
    |||||||| ||||||||||||| ||||||| ||||||||||| |||||||| |||||||  ||| | |||| ||||||||    |||| |||||||||||    
T  37925321 caattcaatatattctactttgcatttatgataaagaaaaatgcaccaataattgataagagcactaaaaatcatttttctctctctctctttcacttat 37925222  T
Q  255 acactttttcttaataagtgtgaaatgagc 284  Q
    ||||||||||||||||||||| ||||||||    
T  37925221 acactttttcttaataagtgttaaatgagc 37925192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 159 - 312
Target Start/End: Complemental strand, 40754488 - 40754336
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatag-ttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||| || ||||||||||||| ||||||| ||||||| ||| ||||||||| ||||||| |||| | |||||||||| ||||||  |||||||||||||    
T  40754488 caatttaatatattctactttgcatttatgataaagaagaatgcaccaataggttgataagggcactcaaaaccatttctctctc--tttcacttataca 40754391  T
Q  258 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 312  Q
    |||||||||||||||| |||||||||  ||  | ||||||||| ||||| |||||    
T  40754390 ctttttcttaataagtatgaaatgagtcaagagctcagttaaattgggacggagg 40754336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 284
Target Start/End: Original strand, 16956585 - 16956701
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 267  Q
    |||||||||||| |||||||| |||| || ||| ||| |||| || |||||| || | ||| |||||||||||| |||||||||||||||||||||||||    
T  16956585 atattctactttatatttatgataaataagaatgcacaaatacttaataaagacactcaaacccatttttctcttcctttcacttatacactttttctta 16956684  T
Q  268 ataagtgtgaaatgagc 284  Q
    ||| |||| ||||||||    
T  16956685 atatgtgtcaaatgagc 16956701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 34813950 - 34814107
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| ||| || |||| ||| |||| || | ||   || ||||||| ||||||||||| | |||||| |||||     
T  34813950 caattcaatatattctactttgcatttatgataatgataaatgcactaatacttaacaagaacacttaaaactatttttctctctccttcactaataca- 34814048  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||||||||||||||||||||||  |||| ||||| ||||| ||||| ||||    
T  34814049 tttttcttaataagtgtgaaatgagcaaaaaattcacttaaattgggacggagggagta 34814107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 27932908 - 27932746
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| ||||||||||||| || | || | |||  |||||||||||| |||||||||||| ||    
T  27932908 caattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgacaaggacactcaaacgcatttttctctctctttcacttatatac 27932809  T
Q  259 tttttctta----ataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||| ||||    |||| |||||||||||| || |  | ||||||||||||| ||||| ||||    
T  27932808 ttttacttaatatataaatgtgaaatgagccaatgacttagttaaaatgggacggagggagta 27932746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 4466235 - 4466072
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||| ||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | ||||| | | ||| ||||||||||||| | ||||||     
T  4466235 cacttccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaaggtactcaaacccatttttctctctcattcacta 4466136  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||| | |||||||||||||||||||||||| |||| || ||| ||||| ||||| ||||| ||||    
T  4466135 atata-tttttcttaataagtgtgaaatgaacaaatggctcaattaaattgggacggagggagta 4466072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 26760381 - 26760461
Alignment:
Q  231 catttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 311  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||  ||||| || |||||||||||| ||||    
T  26760381 catttttctctctctttcacttatacattttttcttaataagtgtgaaatgagtcaaaggctcggttaaaatgggacggag 26760461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 153 - 287
Target Start/End: Original strand, 16040104 - 16040237
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||| ||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | |||| || ||||||||||||||||||| | || |||     
T  16040104 cacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacacttaaaaccatttttctctctccttgacta 16040203  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||| | ||||||||||||| |||||||||||||||    
T  16040204 atata-tttttcttaataaatgtgaaatgagcaaa 16040237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 31798451 - 31798546
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 256  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||| | |||||||| |||||||  |||||||||||||    
T  31798451 caattcaatatattctactttgcatttatgataaagaataatgcaccaatagttgataagggcactcaaaaccatatttctct--ctttcacttatac 31798546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 306
Target Start/End: Complemental strand, 3718924 - 3718779
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||| ||||||  ||||||| ||| || |||| ||| |||| |||| ||  ||| ||||||| ||||||||||| ||| || | |||||     
T  3718924 caattcaatatattatactttacatttatgataatgataaatgcacaaatacttgacaagagcacttaaaactatttttctctctctt-cattaataca- 3718827  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    |||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  3718826 tttttcttaataagtgtgaaatgagcaaaatgttcacttaaattggga 3718779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 317
Target Start/End: Complemental strand, 11425949 - 11425787
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 253  Q
    ||||||||| ||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | |||| || | ||||| ||||||||||| | |||||| |    
T  11425949 acttccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaagacactcaaaactatttttctctctccttcactaa 11425850  T
Q  254 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    || | |||||||||||||  |||||||||||||| || ||| ||||| ||||| ||||| ||||    
T  11425849 tata-tttttcttaataaacgtgaaatgagcaaatggctcaattaaattgggacggagggagta 11425787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 312
Target Start/End: Original strand, 14090697 - 14090822
Alignment:
Q  183 tttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 282  Q
    |||||| |||| || ||| |||||||||||||||||| || | ||  | |||||||||||  ||||||||||||| ||| ||||||||||||||||||||    
T  14090697 tttatgataaacaagaatgcaccaatagttgataaagacaatcaa--ctatttttctctc--tttcacttatacattttgtcttaataagtgtgaaatga 14090792  T
Q  283 gcaaaaggttcagttaaaatgggagggagg 312  Q
    || |   ||||||||||||||||| |||||    
T  14090793 gcgaggagttcagttaaaatgggatggagg 14090822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 262
Target Start/End: Complemental strand, 36232867 - 36232761
Alignment:
Q  156 ttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttata 255  Q
    ||||||||||| |||||||||||| |||||||| ||||||| ||| |||||||| |||  |||| || | |||| |||||||||||| |||||  |||||    
T  36232867 ttccaattcaatatattctactttatatttatgataaagaagaatgcaccaatacttgtcaaagacactcaaaatcatttttctctctctttcgtttata 36232768  T
Q  256 cactttt 262  Q
    |||||||    
T  36232767 cactttt 36232761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 2886323 - 2886403
Alignment:
Q  237 tctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||| || || ||| ||||||||||| | ||||||||    
T  2886323 tctctctctctcacttatacactttttcttaataagtatgaaatgagccaagggctcaattaaaatgggacgaaggaagta 2886403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 283
Target Start/End: Complemental strand, 10587656 - 10587533
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||||| |||| ||||||| ||| ||| |||  | || || ||||||| | || ||||||  ||||||||||  ||||||||||| |||    
T  10587656 caattcaatatattctattttgcatttatgataatgaagaatgtatca-taattgataatgacacttaaaattatttttctctttctttcacttatgcac 10587558  T
Q  259 tttttcttaataagtgtgaaatgag 283  Q
    |||||||||||||||||||||||||    
T  10587557 tttttcttaataagtgtgaaatgag 10587533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 303
Target Start/End: Complemental strand, 25983702 - 25983565
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    |||||||||||||||| |||| ||||||| |||| |  ||| |||||||| || |||| | || ||||||| ||||| ||||    ||||||||||||||    
T  25983702 aattcaacatattctattttgcatttatgataaaaatgaatgcaccaatacttaataa-gacacttaaaacaattttactct----ttcacttatacact 25983608  T
Q  260 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatg 303  Q
    ||||||||||| ||||| ||||| ||||||  ||||||||||||    
T  25983607 ttttcttaatatgtgtg-aatgaacaaaagactcagttaaaatg 25983565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 27210042 - 27209921
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||| ||||  ||||||| ||||||| ||| |||||||| |||  |||| || | |||| |||||||||||| |||||| ||||||||    
T  27210042 caattcaatatattctcctttacatttatgataaagaagaatgcaccaatacttgtcaaagacactcaaaatcatttttctctctctttcatttatacac 27209943  T
Q  259 tttttcttaataagtgtgaaatg 281  Q
     ||||||||||| |||| |||||    
T  27209942 -ttttcttaatatgtgtaaaatg 27209921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 280
Target Start/End: Complemental strand, 705424 - 705303
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||| ||||||  || |||| ||||||| ||| ||| |||| || |||||| |||| |||| ||||||||| || |||| |||||||||     
T  705424 caattcaatatattatactttacatctatgataaagaagaatgcactaatacttaataaagacattcaaaatcatttttctttctctttaacttatacat 705325  T
Q  259 tttttcttaataagtgtgaaat 280  Q
    |||||||||||| || ||||||    
T  705324 tttttcttaatatgtatgaaat 705303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 36326257 - 36326122
Alignment:
Q  182 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 281  Q
    ||||||| |||| || ||| |||||||| |||| |||| || | ||||||||| ||||||| |||||| |||||||| ||||||||||  ||||||||||    
T  36326257 atttatgataaacaagaatgcaccaatatttgacaaagacactcaaaaccattgttctctctctttcatttatacac-ttttcttaatctgtgtgaaatg 36326159  T
Q  282 agcaaaaggttcagttaaaatgggagggaggaagtac 318  Q
      |||  || ||||||||| ||||| ||||| |||||    
T  36326158 ttcaactggctcagttaaactgggatggagggagtac 36326122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 317
Target Start/End: Complemental strand, 2219528 - 2219366
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 253  Q
    ||||||||||||| ||||| ||||||  ||||||| ||||||| ||| || ||||  || |||||| || | |||| |||| ||||||| |||||| |||    
T  2219528 acttccaattcaatatattttactttacatttatgataaagaagaatgcatcaatcttttataaagacactcaaaatcattattctctctctttcattta 2219429  T
Q  254 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||  ||| |||||| ||||||||||||  ||| |||||| ||||  ||||| ||||| ||||    
T  2219428 taca-atttacttaatcagtgtgaaatgaaaaaatggttcaattaatctgggacggagggagta 2219366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 13409849 - 13409730
Alignment:
Q  163 tcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttt 262  Q
    |||| ||||||||| |  |||||||| ||||||||||| || ||||| || |||||  |   |||||| |||||||||| ||||||||||||| | ||||    
T  13409849 tcaatatattctacctcatatttatgataaagaaaaatgcatcaatacttaataaatactagtaaaactatttttctcttcctttcacttatatattttt 13409750  T
Q  263 tcttaataagtgtgaaatga 282  Q
    ||||||||  ||||||||||    
T  13409749 tcttaatatatgtgaaatga 13409730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 28706675 - 28706577
Alignment:
Q  182 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 281  Q
    ||||||| ||||||||||| || ||||| |||| ||||||| | |||||||||||||||||   |||| ||||||| ||||| |||||| ||||||||||    
T  28706675 atttatgataaagaaaaatgcatcaatacttgacaaaggcactcaaaaccatttttctctcttattcatttataca-ttttttttaatatgtgtgaaatg 28706577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 299
Target Start/End: Original strand, 32348244 - 32348390
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| |||||| |||||| |||| || ||  | |||||| ||||||| || | ||  ||| ||||||||||||||||||| | |||| |    
T  32348244 tcactcccaattcaatatattccactttgcatttgtgatagtggaaaatagaccaatacttaacaagagcacttaaaaccatttttctctctccttcatt 32348343  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    |||||| ||| |||||||| ||||||  |||||||| || ||||||||    
T  32348344 tataca-tttgtcttaatatgtgtgatttgagcaaatggctcagttaa 32348390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 14352593 - 14352705
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaacca---tttttctctccctttca 249  Q
    |||| ||||||||| |||||||||||| |||||| | ||||||| ||| |||||||| |||| |||| || | |||||||   ||||||||||  |||||    
T  14352593 cactcccaattcaatatattctactttatatttacgataaagaagaatgcaccaatacttgacaaagacactcaaaaccattttttttctctctatttca 14352692  T
Q  250 cttatacactttt 262  Q
     ||||||||||||    
T  14352693 tttatacactttt 14352705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 281
Target Start/End: Original strand, 4659529 - 4659585
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 281  Q
    ||||||| ||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  4659529 ttaaaactatttttctctccccttcactaataca-tttttcttaataagtgtgaaatg 4659585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 262
Target Start/End: Original strand, 37495861 - 37495963
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||||||||||  ||||||  ||||||| ||| |||||||| ||||||||| |||| |||| ||  ||||||||  ||||| |||||||    
T  37495861 ccaattcaatatattctactttacatttataataaagaagaatgcaccaatacttgataaagacattcaaaatca--tttctctctttttcatttataca 37495958  T
Q  258 ctttt 262  Q
    |||||    
T  37495959 ctttt 37495963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 287
Target Start/End: Original strand, 27391380 - 27391507
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||| |||||| ||||||| |||    ||||  ||||||| || ||||  ||| |||||| |||||||||||| | ||||||||||||     
T  27391380 caattcaatatattccactttgcatttatgataatagtaaatgaaccaatacttaataagagcacttaaaatcatttttctctctccttcacttataca- 27391478  T
Q  259 tttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||| ||||||||||||| ||| ||||    
T  27391479 tttttcgtaataagtgtgaattgaacaaa 27391507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 34332217 - 34332272
Alignment:
Q  233 tttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 289  Q
    |||||||||| |||||||||||||| |||||||||||| ||||||||||| ||||||    
T  34332217 tttttctctctctttcacttataca-tttttcttaatatgtgtgaaatgaacaaaag 34332272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 279
Target Start/End: Original strand, 40061842 - 40061961
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||||| |||| ||||||| ||| |||||||  | ||||| |||||||   ||||||||| ||||||||||||   ||| ||||||||     
T  40061842 caattcaatatattctaatttgcatttatgataatgaaaaatgtaacaatacttgataagaacatttaaaatcatttttctctcttcttcgcttataca- 40061940  T
Q  259 tttttcttaataagtgtgaaa 279  Q
    ||| | |||||||||||||||    
T  40061941 tttcttttaataagtgtgaaa 40061961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 40988450 - 40988506
Alignment:
Q  226 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 282  Q
    |||||||||| |||||| |||||||||||||  |||||||||||| |||||||||||    
T  40988450 aaaaccatttgtctctctctttcacttatactatttttcttaatatgtgtgaaatga 40988506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 49494173 - 49494114
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 284  Q
    ||||||| ||||||||||| |||||| ||||||| |||||||||||| |||||||||||||    
T  49494173 ttaaaactatttttctctctctttcatttataca-tttttcttaatacgtgtgaaatgagc 49494114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 287
Target Start/End: Original strand, 49944981 - 49945092
Alignment:
Q  175 actttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtg 274  Q
    |||||| ||||||| || |||| ||| ||| |||| || | ||  ||| |||||||||||||||||||   |||| ||||||| |||||||||||| |||    
T  49944981 actttgcatttatgatagagaagaatgcacaaatacttaacaagagcacttaaaaccatttttctctcttcttcatttataca-tttttcttaatatgtg 49945079  T
Q  275 tgaaatgagcaaa 287  Q
    |||||||||||||    
T  49945080 tgaaatgagcaaa 49945092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 50267514 - 50267391
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| |||||  |||||  ||||||| ||| | | ||| |||||||| || | ||  ||| ||||||| ||||||||||| |||||| |||||||    
T  50267514 ccaattcaatatatttcactttacatttatgataatggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctcactttcatttataca 50267415  T
Q  258 ctttttcttaataagtgtgaaatga 282  Q
     |||||||||||| |||||||||||    
T  50267414 -tttttcttaatacgtgtgaaatga 50267391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 262
Target Start/End: Original strand, 51049540 - 51049643
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||| ||||||  ||||||| |||| || ||| ||| || | ||||||||| |||| ||||||||||||||||| |||| | |||||||    
T  51049540 ccaattcaatatattatactttacatttatgataaaaaagaatgcactaa-acttgataaagacattcaaaaccatttttctctctcttttatttataca 51049638  T
Q  258 ctttt 262  Q
    |||||    
T  51049639 ctttt 51049643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 7224500 - 7224563
Alignment:
Q  226 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 289  Q
    ||||||||||||| ||  |||||||||||||| ||||| |||||| ||||||||||| ||||||    
T  7224500 aaaaccatttttcgctttctttcacttatacatttttttttaatatgtgtgaaatgaacaaaag 7224563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 316 - 355
Target Start/End: Original strand, 29051382 - 29051421
Alignment:
Q  316 tacttttttgggcaattaaacgttttaggacttgaatatt 355  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  29051382 tacttttttgggcacttaaacgttttaggacttgaatatt 29051421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 317
Target Start/End: Original strand, 29225779 - 29225942
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttt-tctctccctttcac 250  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||  |  ||| |||||||| |||| || | || | ||| | ||||| |||||| |||||||    
T  29225779 tcactcccaattcaatatattctactttgcatttatgataagaatgaatgcaccaatacttgacaa-gacactcaaacctattttctctctctctttcac 29225877  T
Q  251 ttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    || ||||||||||||||||  |||| |||| | ||||| | |||||||| |||||| ||||| ||||    
T  29225878 ttgtacactttttcttaat--gtgtaaaattaacaaaatgctcagttaacatgggacggagggagta 29225942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 33149306 - 33149389
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctc 242  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| |||||||| || |||| | || | ||| |||||||||||||    
T  33149306 caattcaatatattctactttgcatttatgataaagaagaatccaccaataattaataaggacactcaaatccatttttctctc 33149389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 168 - 284
Target Start/End: Original strand, 44580558 - 44580676
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacacttttt--ct 265  Q
    ||||||||||||| ||||||| |||| |||||| ||| |||||||||||| | || |  || ||||||||||||  ||||||||||||| || |||  ||    
T  44580558 atattctactttgcatttatgataaaaaaaaatgcacaaatagttgataaggtcactctaacccatttttctct--ctttcacttatactctctttcact 44580655  T
Q  266 ta--ataagtgtgaaatgagc 284  Q
    ||  |||||||||||||||||    
T  44580656 taatataagtgtgaaatgagc 44580676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 270
Target Start/End: Complemental strand, 45889322 - 45889212
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctc-cctttcacttatacac 258  Q
    ||||||| |||||| |||||| ||||||| ||| | | |||| |||||||||| | ||  ||| ||||||||||||||||||| ||||||| |||||||     
T  45889322 aattcaatatattccactttgcatttatgataatggagaatagaccaatagttaacaagagcacttaaaaccatttttctctctcctttcatttataca- 45889224  T
Q  259 tttttcttaata 270  Q
    ||| ||||||||    
T  45889223 tttgtcttaata 45889212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 50773399 - 50773301
Alignment:
Q  181 tatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaat 280  Q
    |||||||| || | || ||||||| ||||||||||||  ||| | ||| |||   ||||||| ||||||||||||||| ||||||||||||||| |||||    
T  50773399 tatttatgatagaaaagaatacactaatagttgataagagcactcaaaccca---ttctctctctttcacttatacacgttttcttaataagtgcgaaat 50773303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 2886204 - 2886262
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataa 217  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| | ||||||||||||||    
T  2886204 caattcaatatattctactttgcatttatgataaagaagaatgctccaatagttgataa 2886262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 21304880 - 21304760
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| ||||| |||||| |||||||| ||||||||||| || ||||| |||| |||| || | |||| || |||| |||| |||||| ||||||| |    
T  21304880 aattcaatatattatactttatatttatgataaagaaaaatgcatcaatacttgacaaagacactcaaaa-caattttatctctctttcatttataca-t 21304783  T
Q  260 ttttcttaataagtgtgaaatga 282  Q
    ||||||||||   ||||||||||    
T  21304782 ttttcttaatttatgtgaaatga 21304760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 9590554 - 9590650
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccat--ttttctctccctttcacttatacactttt 262  Q
    |||||||||||| |||||||| |||| || ||| ||| |||| |||| ||||||| ||||||||||  || |||||| |||||| ||||||| ||||    
T  9590554 atattctactttatatttatgataaataataatgcacaaatacttgacaaaggcacttaaaaccattattatctctctctttcatttatacaatttt 9590650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 198 - 287
Target Start/End: Original strand, 40019831 - 40019919
Alignment:
Q  198 aatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||||| |||| |||| ||  ||| ||||||| ||||||||||| | |||||||||||| ||||||||||| ||||| |||||| ||||    
T  40019831 aatacacaaatacttgacaagagcacttaaaacaatttttctctctcattcacttataca-tttttcttaatcagtgtaaaatgaacaaa 40019919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 32587798 - 32587921
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||  |||||| ||||||| ||| | ||||| || ||||| || | |||  || ||||||  ||||||||||| | |||| |||||||     
T  32587798 caattcaatatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaaaacacttaaaattatttttctctcaccttcatttataca- 32587896  T
Q  259 tttttcttaataagtgtgaaatgag 283  Q
    |||||||||||| ||||||||||||    
T  32587897 tttttcttaatatgtgtgaaatgag 32587921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 36467205 - 36467146
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 284  Q
    ||||||| ||||||||||| | |||| ||||||| |||||||||||| |||||||||||||    
T  36467205 ttaaaactatttttctctctcattcatttataca-tttttcttaatacgtgtgaaatgagc 36467146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 287
Target Start/End: Original strand, 28839365 - 28839499
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| |||||| |||||| ||||||| ||  | | |||| ||||||| || | ||  ||||||||||| ||||||||||| | |||| |    
T  28839365 tcactcccaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaacaagagcatttaaaactatttttctctctccttcatt 28839464  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||| ||| ||||||||  |||||  ||||||||    
T  28839465 tataca-tttgtcttaatatatgtgatttgagcaaa 28839499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 5040584 - 5040523
Alignment:
Q  225 taaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||||||||||||||| | |||| ||||||| ||| ||| |||| ||||||||||||||||    
T  5040584 taaaaccatttttctctctcattcatttataca-tttgtctaaatatgtgtgaaatgagcaaa 5040523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 5442438 - 5442495
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 282  Q
    ||||||||||||||||||| | |||| ||||||| ||| |||||||| |||||||||||    
T  5442438 ttaaaaccatttttctctctcattcatttataca-tttgtcttaataggtgtgaaatga 5442495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 6787342 - 6787403
Alignment:
Q  221 catttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 283  Q
    |||||||||| ||||||||||| |||||  ||||| | |||||||||||| ||||||||||||    
T  6787342 catttaaaactatttttctctctctttcgtttatata-tttttcttaatacgtgtgaaatgag 6787403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 260
Target Start/End: Complemental strand, 12267707 - 12267605
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||||||||||  ||||||| ||||||| |||  ||||||| |||| ||| ||| | ||||| |||||||| || ||||   |||||||    
T  12267707 ccaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgaaaaatgcactcaaaactatttttctttctcttttctttataca 12267608  T
Q  258 ctt 260  Q
    |||    
T  12267607 ctt 12267605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 25418743 - 25418802
Alignment:
Q  226 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||| |||||||||||  ||||||||||| | |||||||||||| || |||||||||||||    
T  25418743 aaaactatttttctctc--tttcacttatataatttttcttaatatgtatgaaatgagcaaa 25418802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 39420692 - 39420750
Alignment:
Q  232 atttttctctccctttcacttatacac-tttttcttaataagtgtgaaatgagcaaaag 289  Q
    ||||||||||| |||||| |||||||| |||||||||||| | ||||||||| ||||||    
T  39420692 atttttctctctctttcatttatacacttttttcttaatatgcgtgaaatgaacaaaag 39420750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 2571469 - 2571514
Alignment:
Q  234 ttttctctccctttcacttatacactttttcttaataagtgtgaaa 279  Q
    ||||||||| |||||| ||||||| |||||||||||| ||||||||    
T  2571469 ttttctctctctttcatttatacattttttcttaatatgtgtgaaa 2571514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 18186187 - 18186142
Alignment:
Q  245 tttcacttatacactttttcttaataagtgtgaaatgagcaaaagg 290  Q
    ||||||| ||||| |||||||||||| |||||||||||| ||||||    
T  18186187 tttcactcatacaatttttcttaatacgtgtgaaatgagtaaaagg 18186142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 280
Target Start/End: Original strand, 27831872 - 27831997
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| || ||| |||||| ||||||| ||| |   ||| |||||||| |||| || |||| ||||||| ||||||||||  ||||||||    
T  27831872 tcactcccaattcaatatcttccactttgcatttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactatttttctct--ctttcact 27831969  T
Q  252 tatacactttttcttaataagtgtgaaat 280  Q
     || ||| |||||||||||  ||||||||    
T  27831970 catgcac-ttttcttaatatttgtgaaat 27831997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 37525134 - 37525195
Alignment:
Q  220 gcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 284  Q
    ||||||||||| ||||||||||||  |||| ||||||| ||||||||||||  ||||||||||||    
T  37525134 gcatttaaaactatttttctctcc--ttcatttataca-tttttcttaatacatgtgaaatgagc 37525195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 28424327 - 28424279
Alignment:
Q  232 atttttctctccctttcacttatacactttttcttaataagtgtgaaat 280  Q
    |||||||||||  ||| | |||||||||||||||||||| |||||||||    
T  28424327 atttttctctctattttatttatacactttttcttaatatgtgtgaaat 28424279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 42309528 - 42309589
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||||||||||||| |||  ||||||||||| | ||||||||||||  |||||||||| ||||    
T  42309528 ttaaaaccatttttcactc--tttcacttatatattttttcttaatatatgtgaaatgaacaaa 42309589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 46968113 - 46968189
Alignment:
Q  161 attcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccattttt 237  Q
    |||||||||||| |||||| |||||||| ||| || |||||||| |||| || | ||   |||||||||||||||||    
T  46968113 attcaacatattttactttatatttatgataatgataaatacactaatacttaacaataacatttaaaaccattttt 46968189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 284
Target Start/End: Complemental strand, 52830492 - 52830365
Alignment:
Q  156 ttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttata 255  Q
    |||||||| || |||||| |||||  ||||||| ||  | ||||| |||||||| || | ||| ||| | ||||  ||||||||||| | |||| |||||    
T  52830492 ttccaattgaatatattccactttacatttatgatagtggaaaatgcaccaatacttaacaaatgcactcaaaattatttttctctctccttcatttata 52830393  T
Q  256 cactttttcttaataagtgtgaaatgagc 284  Q
    || ||||| |||||| |||||||||||||    
T  52830392 ca-ttttttttaatacgtgtgaaatgagc 52830365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 5e-45; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 153 - 317
Target Start/End: Original strand, 14689987 - 14690151
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| ||||||||||||| ||||||| |||| || ||| |||||||||||||||| | || | ||||||||||||||||| |||||||||    
T  14689987 cactcccaattcaatatattctactttgcatttatgataaaaaagaatgcaccaatagttgataaggacactcaaaaccatttttctctctctttcactt 14690086  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||||||||||||||||||||||||||||  || || ||||||||||||||| ||||| ||||    
T  14690087 atacactttttcttaataagtgtgaaatgagtcaagggctcagttaaaatgggacggagggagta 14690151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 355 - 485
Target Start/End: Original strand, 1354819 - 1354949
Alignment:
Q  355 ttgagaggacaccctaaatctaaagcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtgactactaat 454  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| | |||||||    
T  1354819 ttgaaaggaaaccctaaatttaaagcagtttcatgatttcatcaatctggtccttagagaaattaacataacaatgatcagaaacaaagtaattactaat 1354918  T
Q  455 tatgaattttctaattacctctggaaaactt 485  Q
    ||||||||||| |||||| |||  |||||||    
T  1354919 tatgaattttcaaattacatctaaaaaactt 1354949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 159 - 306
Target Start/End: Complemental strand, 8394329 - 8394180
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctc--tccctttcacttatac 256  Q
    |||||||| ||||| ||||||||||||||| ||||||| ||| ||||||||||||||||  |||||||||  ||||||||||  || |||  ||||||||    
T  8394329 caattcaatatattttactttgtatttatgataaagaataatgcaccaatagttgataagagcatttaaactcatttttctctttctcttatacttatac 8394230  T
Q  257 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    |||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  8394229 actttttcttaataagtgtgaaatgagttaagagttcagttaaaatggga 8394180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 33743809 - 33743967
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    ||||| || ||||||||||||||||||||| ||||||| ||| ||| ||||||||||||   || | ||| ||||||||||||| |||||| ||||||||    
T  33743809 caatttaatatattctactttgtatttatgataaagaagaatgcacaaatagttgataagtacactcaaacccatttttctctctctttcatttatacac 33743908  T
Q  259 tttttcttaataagtgtgaaatg-agcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||||||||||||||| ||||| | ||||| |||||||||||  |||||||||    
T  33743909 tttttcttaataagtgtgaaatgaagcaaga-gttcaattaaaatgggatcgaggaagta 33743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 355 - 472
Target Start/End: Complemental strand, 1344744 - 1344627
Alignment:
Q  355 ttgagaggacaccctaaatctaaagcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtgactactaat 454  Q
    |||| |||| ||||||||| |||||||||||||||  ||||  ||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  1344744 ttgaaaggaaaccctaaatttaaagcagtttcatgccttcactaatctggtccttagagaaattaacataacaatgatcagaaacaaagtgattactaat 1344645  T
Q  455 tatgaattttctaattac 472  Q
    ||||||||||| ||||||    
T  1344644 tatgaattttcaaattac 1344627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 14748780 - 14748620
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccct--ttcacttatac 256  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| ||| ||||||||||||  ||| | ||| |||| |||||||| ||  |||||||||||    
T  14748780 caattcaatatattctactttgcatttatgataaagaagaatgcactaatagttgataagagcactcaaacccatatttctctctctctttcacttatac 14748681  T
Q  257 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||||||||||| |||||||  || || ||||||||||||||| ||||| ||||    
T  14748680 actttttcttaataagtgtaaaatgagtcaagggctcagttaaaatgggacggagggagta 14748620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 32231437 - 32231302
Alignment:
Q  182 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 281  Q
    ||||||| ||||||| |||||| ||||||||||||| |||| | ||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||    
T  32231437 atttatgataaagaagaatacatcaatagttgataagggcactcaaaaccattttcctctctctttcacttatacattttttcttaataaatgtgaaatg 32231338  T
Q  282 agcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||  || || ||| ||||||||||| ||||| ||||    
T  32231337 agacaagggctcaattaaaatgggacggagggagta 32231302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 161 - 284
Target Start/End: Complemental strand, 45421011 - 45420888
Alignment:
Q  161 attcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactt 260  Q
    |||||| ||||| ||||||| ||||||| ||||||| ||| | |||| |||||| || |||| | ||| ||||||||||||| |||||||||||||||||    
T  45421011 attcaatatattttactttgcatttatgataaagaagaatgctccaaaagttgacaagggcactcaaacccatttttctctctctttcacttatacactt 45420912  T
Q  261 tttcttaataagtgtgaaatgagc 284  Q
    ||||||||||||||||||||||||    
T  45420911 tttcttaataagtgtgaaatgagc 45420888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 284
Target Start/End: Complemental strand, 1494313 - 1494197
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 267  Q
    ||||||||||||| ||||||| ||||||| ||| || ||||| ||||||| |||| | |||| |||||||||| | ||||||| |||||| |||| ||||    
T  1494313 atattctactttgcatttatgataaagaagaatgcatcaataattgataagggcactcaaaatcatttttctcactctttcacatatacatttttcctta 1494214  T
Q  268 ataagtgtgaaatgagc 284  Q
    |||||||||||||||||    
T  1494213 ataagtgtgaaatgagc 1494197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 299
Target Start/End: Complemental strand, 25174659 - 25174519
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||  ||||||| ||| ||||||||||| |||| |||| | |||| |||| || |||| |||| |||||||||     
T  25174659 caattcaatatattctactttgcatttataataaagaataatgcaccaatagttaataagggcactcaaaatcattcttttctctcttttacttatacat 25174560  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    ||||||||||||| | |||||||||  ||||| ||||||||    
T  25174559 tttttcttaataaatatgaaatgagtcaaaggctcagttaa 25174519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 299
Target Start/End: Original strand, 5392076 - 5392221
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| |||||| |||||| ||||||| ||  | | ||| |||||||| |||| ||| ||| ||||||||||||||||||| | |||| ||    
T  5392076 cactcccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttgacaaaagcacttaaaaccatttttctctctccttcattt 5392175  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    ||||| ||| |||||||| |||||||||||||||| || ||||||||    
T  5392176 ataca-tttgtcttaataggtgtgaaatgagcaaatggctcagttaa 5392221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 886522 - 886397
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||| | ||||||||||||| ||||||| ||||||| ||| |||  ||||||||||| | || | |||  |||||  ||||| ||||||||| |||||    
T  886522 caattcgatatattctactttgcatttatgataaagaagaatgcacagatagttgataaggacaatcaaactcatttccctctctctttcacttgtacac 886423  T
Q  259 tttttcttaataagtgtgaaatgagc 284  Q
    ||||||||||||||||||||||||||    
T  886422 tttttcttaataagtgtgaaatgagc 886397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 8566191 - 8566041
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaata--caccaatagttgataaaggcatttaaaaccatttttctctccctttcac 250  Q
    |||||||||||||| ||||||| |     ||||||| |||||||||| |  || ||||||||||||| |||| | |||  |||||||||| | |||||||    
T  8566191 cacttccaattcaatatattctgc-----atttatgataaagaaaaaaatgcatcaatagttgataagggcactcaaacacatttttctccctctttcac 8566097  T
Q  251 ttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    |||||||| ||||||||||||||||||||||||  || |  |||||||||||||||    
T  8566096 ttatacacgttttcttaataagtgtgaaatgagtcaatgactcagttaaaatggga 8566041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 279
Target Start/End: Original strand, 2195494 - 2195620
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||  || ||| |||||||| || | || | || | ||||| ||||||||||| ||||||||    
T  2195494 tcactcccaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaa-gacactcaaaactatttttctctctctttcact 2195592  T
Q  252 tatacactttttcttaataagtgtgaaa 279  Q
    ||||||||||||||||||| ||||||||    
T  2195593 tatacactttttcttaatatgtgtgaaa 2195620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 306
Target Start/End: Original strand, 39998196 - 39998342
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| | | |||| ||||||||| || |||||| |||||||||||| |||||| |||||| |    
T  39998196 caattcaatatattctactttacatttatgataaagaagaatgctcaaatacttgataaagacacttaaaatcatttttctctctctttcatttatactc 39998295  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
     ||||||||||| || ||||||||| ||| || ||| ||||| |||||    
T  39998296 -ttttcttaatatgtatgaaatgagaaaatggctcaattaaactggga 39998342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 287
Target Start/End: Complemental strand, 42412464 - 42412330
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| |||||| |||||| ||||||| ||| | | ||| ||||||||  ||| ||  ||| ||||||| ||||||||||| | ||||||    
T  42412464 tcactcccaattcaatatattccactttgcatttatgataatggagaatgcaccaatatatgacaagagcacttaaaactatttttctctctcattcact 42412365  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||| |||||||||||| ||||||||||||||||    
T  42412364 tataca-tttttcttaatatgtgtgaaatgagcaaa 42412330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 10043378 - 10043455
Alignment:
Q  368 ctaaatctaaagcagtttcatgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaagtg 445  Q
    |||||| |||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||| | ||||||||||    
T  10043378 ctaaatttaaagcagtttcattattttatcaatctggtccttagagaaattaacataacagtgatcagaaacaaagtg 10043455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 29638335 - 29638455
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| ||||| ||||||  ||||||| ||||||| |||  ||||||| |||| ||||||||| ||||||||||||||||  |||||| ||||||||     
T  29638335 aattcaatatattatactttacatttatgataaagaataatgaaccaatacttgacaaaggcattcaaaaccatttttctctttctttcatttatacac- 29638433  T
Q  260 ttttcttaataagtgtgaaatg 281  Q
    ||||||||||  ||||||||||    
T  29638434 ttttcttaatctgtgtgaaatg 29638455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 14117490 - 14117598
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 253  Q
    |||| |||||||| |||||| |||||  ||||||| ||||||| |||||||||||| |||| ||||||| | ||||| | ||||||||| |||||  |||    
T  14117490 actttcaattcaatatattcaactttacatttatgataaagaagaatacaccaatacttgaaaaaggcactcaaaactaattttctctctctttccttta 14117589  T
Q  254 tacactttt 262  Q
    |||||||||    
T  14117590 tacactttt 14117598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 29451382 - 29451540
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||| ||||||| ||||||| |||  || ||||||| |||| |||| |||    || ||||| |||||||||||  ||||| |||||||     
T  29451382 caattcaatatattatactttggatttatgataagaaagaatacactaatacttgacaaaatg-ttcaaaactatttttctctc--tttcatttatacat 29451478  T
Q  259 ---tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
       |||||||||||| ||||||||||| |||||||||| |||||||||||| ||||||||||    
T  29451479 cattttttcttaatatgtgtgaaatgaacaaaaggttcggttaaaatgggatggaggaagta 29451540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 28791340 - 28791462
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| |||||||| |||  ||||||| ||||||| ||| |||||||| |||| ||||||| | ||||| ||||||||||| ||||   |||||||    
T  28791340 ccaattcaatatattctagtttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctctctttactttataca 28791439  T
Q  258 ctttttcttaataagtgtgaaatg 281  Q
    | ||||||||||  ||||||||||    
T  28791440 c-ttttcttaatctgtgtgaaatg 28791462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 40077823 - 40077705
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||| |||| || | |||| ||||||| |||| |||||| ||||||||     
T  40077823 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacactcaaaatcatttttttctctctttcatttatacac- 40077725  T
Q  260 ttttcttaataagtgtgaaa 279  Q
    ||||||||||| | ||||||    
T  40077724 ttttcttaatatgagtgaaa 40077705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 27868399 - 27868271
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| ||| || ||||  | ||||| |||| ||   ||  ||||||||||||||||   | |||||| |||||     
T  27868399 caattcaatatattctactttgcatttatgataatgataaatggatcaatacttgacaagaacacgtaaaaccatttttctccatcattcactaataca- 27868301  T
Q  259 tttttcttaataagtgtgaaatgagcaaaa 288  Q
    ||||||||||||||||||||||||||||||    
T  27868300 tttttcttaataagtgtgaaatgagcaaaa 27868271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 311
Target Start/End: Complemental strand, 27973761 - 27973609
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    |||||||||  |||||||||||| ||||||| ||| |  ||||  | ||||| |||| ||   || |||||||||||||||||   | |||||| |||||    
T  27973761 ccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctccatccttcactaataca 27973662  T
Q  258 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 311  Q
     |||||||||||||||||||||||||||||| | ||| ||||| ||||| ||||    
T  27973661 -tttttcttaataagtgtgaaatgagcaaaatgctcacttaaattgggacggag 27973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 311
Target Start/End: Complemental strand, 28031030 - 28030878
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    |||||||||  |||||||||||| ||||||| ||| |  ||||  | ||||| |||| ||   || |||||||||||||||||   | |||||| |||||    
T  28031030 ccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctccatccttcactaataca 28030931  T
Q  258 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 311  Q
     |||||||||||||||||||||||||||||| | ||| ||||| ||||| ||||    
T  28030930 -tttttcttaataagtgtgaaatgagcaaaatgctcacttaaattgggacggag 28030878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 9734232 - 9734119
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 267  Q
    ||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||    | | ||| ||||||||||||  |||||| ||||||| ||||| |||    
T  9734232 atattttactttgcatttatgataaagaagaatgcaccaatagttgataagaatactcaaatccatttttctct--ctttcatttatacattttttttta 9734135  T
Q  268 ataagtgtgaaatgag 283  Q
    |||| |||||||||||    
T  9734134 ataaatgtgaaatgag 9734119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 317
Target Start/End: Original strand, 2797139 - 2797230
Alignment:
Q  226 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||  |||||||||| ||||| | ||| ||| ||| ||| ||||| ||||    
T  2797139 aaaaccatttttctctttctttcacttattcactttttcttaatagttgtgaaatgaacaaaaagctcatttataattggacggagggagta 2797230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 287
Target Start/End: Complemental strand, 7258448 - 7258314
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| |||||||| |||| ||||||| ||| || |||| |||||||| |||| ||  ||  ||||||||||||||||||  | |||| |    
T  7258448 tcactcccaattcaatatattctagtttgcatttatgataatgataaatgcaccaatacttgacaagagcgcttaaaaccatttttctctttccttcatt 7258349  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaa 287  Q
     ||| | ||||| |||||||||||||||| ||||||    
T  7258348 aatata-ttttttttaataagtgtgaaataagcaaa 7258314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 8840445 - 8840514
Alignment:
Q  244 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaa 314  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||||| ||| ||| ||||||| |||||||    
T  8840445 ctttcacttatacaatttttcttaatatgtgtgaaatga-caaaaggctcacttataatgggacggaggaa 8840514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 15559203 - 15559086
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| ||||||||||||| ||||||| ||| |  ||||||||||||| |||| ||   || |||||| ||||||| |||| | |||||| ||||| |    
T  15559203 aattcaatatattctactttgcatttatgataatggtaaatacaccaatacttgacaagaacacttaaaatcatttttgtctctccttcactaataca-t 15559105  T
Q  260 ttttcttaataagtgtgaa 278  Q
    |||||||||||| ||||||    
T  15559104 ttttcttaataaatgtgaa 15559086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 307
Target Start/End: Original strand, 37459377 - 37459521
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| |||||| || |||||| |||||| ||||||| ||||||| |||||| ||||||||||| ||  |||       ||||||| ||||  ||||| ||    
T  37459377 cactcccaatttaatatattcaactttgcatttatgataaagaagaatacatcaatagttgatcaa--cat-------catttttttctctttttcattt 37459467  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggag 307  Q
    |||||||||| ||||||||||||||||||||| || |  | ||||||||||||||    
T  37459468 atacactttt-cttaataagtgtgaaatgagccaatgacttagttaaaatgggag 37459521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 322
Target Start/End: Original strand, 41726553 - 41726714
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| |||| ||||||| | ||||| || |||||||  |||||  |||||||    
T  41726553 ccaattcaatatattctactttacatttatgataaagaagaatgcaacaatacttgaaaaaggcactcaaaactatatttctct--ctttcttttataca 41726650  T
Q  258 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtactttt 322  Q
     |||||||||||  ||||||||||   ||   ||||||||||| ||||| ||||| |||| ||||    
T  41726651 -tttttcttaatctgtgtgaaatggaaaattagttcagttaaactgggacggagggagtaatttt 41726714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 36012001 - 36011909
Alignment:
Q  226 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag-gttcagttaaaatgggagggaggaagta 317  Q
    |||||||||| ||| || ||||||||||||||| ||||||||| |  |||||||||| ||||||  || | ||||||||||| ||||||||||    
T  36012001 aaaaccatttctctttctctttcacttatacacattttcttaacatatgtgaaatgaacaaaagacttgacttaaaatgggacggaggaagta 36011909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 1354206 - 1354159
Alignment:
Q  13 cagaacaatttggttcctttttctaatgcaactttgaatggctgcaaa 60  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  1354206 cagatcaatttggttcatttttcttatgcaactttgaatggctgcaaa 1354159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 289
Target Start/End: Complemental strand, 325105 - 325028
Alignment:
Q  211 ttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 289  Q
    |||| ||||||| | |||||||||||||| ||| ||||||||||||| ||| |||||||| || |||||||| ||||||    
T  325105 ttgacaaaggcaatcaaaaccatttttctttccttttcacttataca-tttgtcttaatatgtttgaaatgaacaaaag 325028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 29615830 - 29615955
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| |||||| |||||  |||||||  |  | ||| |||||||||| || | ||  ||||||||||  ||||||||||| | |||| |||||||    
T  29615830 ccaattcaatatattccactttacatttatgacagtggaaagtacaccaatacttaacaagtgcatttaaaattatttttctctctccttcatttataca 29615929  T
Q  258 ctttttcttaataagtgtgaaatgagc 284  Q
     |||||||||||| |||||||||||||    
T  29615930 -tttttcttaatacgtgtgaaatgagc 29615955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 256
Target Start/End: Complemental strand, 41759705 - 41759607
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 256  Q
    ||||||||| ||||| ||||||||||||||| ||||||| ||| |||||||| |||| || | || | |||  ||||||| |||| ||||||| |||||    
T  41759705 ccaattcaatatattttactttgtatttatgataaagaagaatgcaccaataattgacaaggacactcaaactcatttttttctctctttcacatatac 41759607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 2875094 - 2875005
Alignment:
Q  228 aaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||||||  ||||||||||| ||| |||||||||||  |||||||||| ||||| | | | ||| ||||||| ||||| ||||    
T  2875094 aaccatttttctctttctttcacttattcaccttttcttaatagttgtgaaatgaacaaaaagcttatttataatgggacggagggagta 2875005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 276
Target Start/End: Complemental strand, 5423238 - 5423122
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| || ||| |||||||||||||| ||| |  ||||||||||||  |||| || | || | |||| |||||||||||| ||||||||||| ||     
T  5423238 caattcaatatcttccactttgtatttatgataatggtaaatacaccaatgcttgacaaggacactcaaaatcatttttctctctctttcacttatgca- 5423140  T
Q  259 tttttcttaataagtgtg 276  Q
    ||| |||||||| |||||    
T  5423139 tttatcttaatatgtgtg 5423122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 280
Target Start/End: Original strand, 26677115 - 26677227
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaac-catttttctctccctttcacttatacactttttctt 266  Q
    ||||||||||||| ||||||| ||| |   ||| |||||||| || | || | || |||||||  ||||||||||| |||||||||||||| ||||||||    
T  26677115 atattctactttgcatttatgataatggtgaatgcaccaatattttacaatgacacttaaaacaaatttttctctctctttcacttataca-tttttctt 26677213  T
Q  267 aataagtgtgaaat 280  Q
    |||| |||||||||    
T  26677214 aatatgtgtgaaat 26677227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 139055 - 139178
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||  |||||| |||||| ||||||| ||  | ||||| |||||||| || | ||  | |||||||| ||||||| |||| | |||| |||||||     
T  139055 caattcattatattccactttgcatttatgatagcggaaaatgcaccaatacttaacaagagaatttaaaatcatttttatctctcattcatttataca- 139153  T
Q  259 tttttcttaataagtgtgaaatgag 283  Q
    |||||||||||| ||||||||||||    
T  139154 tttttcttaatatgtgtgaaatgag 139178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 294
Target Start/End: Original strand, 11637173 - 11637308
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccct-ttcacttataca 257  Q
    |||||||| ||||||||||||  ||||||| ||||||| |||  | ||||| |||  |||| || | ||||| |||||||||||    || |||||||||    
T  11637173 caattcaatatattctactttacatttatgataaagaataatgtatcaatacttggcaaagacactcaaaac-atttttctctcttaatttacttataca 11637271  T
Q  258 ctttttcttaataagtgtgaaatgagcaaaaggttca 294  Q
    ||||||||||||| |||||| |||| ||||| |||||    
T  11637272 ctttttcttaatatgtgtgacatgaacaaaatgttca 11637308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 37703085 - 37703147
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||| ||||||||||||  |||| |||||||| |||||||||||| ||||||||||| ||||    
T  37703085 ttaaaatcatttttctctctttttcgcttataca-tttttcttaatatgtgtgaaatgatcaaa 37703147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 5878300 - 5878196
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttc--tctccctttcacttatac 256  Q
    |||||||| ||||||||||||  ||||||| ||| | | |||  || |||| |||| |||| ||||||||||||||||||  |||| |||||| ||||||    
T  5878300 caattcaatatattctactttacatttatgataa-gtagaatgaactaatacttgacaaagacatttaaaaccatttttctctctctctttcatttatac 5878202  T
Q  257 actttt 262  Q
    ||||||    
T  5878201 actttt 5878196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 12653763 - 12653844
Alignment:
Q  202 caccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 284  Q
    |||||||| || | ||| ||| ||||||| |||||||||||   |||| ||||||| |||||||||||| |||||||||||||    
T  12653763 caccaatatttaacaaacgcacttaaaactatttttctctctacttcatttataca-tttttcttaatacgtgtgaaatgagc 12653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 277
Target Start/End: Original strand, 28802800 - 28802917
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||| |||||| ||||||| ||  | | |||| | ||||| || | ||  ||| ||||||||||||||||||| |||||| |||||||     
T  28802800 caattcaatatattccactttgcatttatgatagtggagaatagatcaatacttaacaagagcacttaaaaccatttttctctctctttcatttataca- 28802898  T
Q  259 tttttcttaataagtgtga 277  Q
    ||| |||||||| ||||||    
T  28802899 tttgtcttaatacgtgtga 28802917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 325190 - 325110
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttct 239  Q
    |||||||| |||||| ||||| |||||||| ||| |   ||| |||||||| |||| ||||||| | ||||||||||||||    
T  325190 caattcaatatattccactttatatttatgataacggtgaatgcaccaatacttgacaaaggcaatcaaaaccatttttct 325110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 1354137 - 1354105
Alignment:
Q  52 ggctgcaaaatgactagctgaaaaaattgtact 84  Q
    ||||| |||||||||||||||||||||||||||    
T  1354137 ggctgaaaaatgactagctgaaaaaattgtact 1354105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 10728921 - 10728885
Alignment:
Q  233 tttttctctccctttcacttatacactttttcttaat 269  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  10728921 tttttttctctctttcacttatacactttttcttaat 10728885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 33890478 - 33890522
Alignment:
Q  246 ttcacttatacactttttcttaataagtgtgaaatgagcaaaagg 290  Q
    |||| ||||||| || ||||||||| |||||||||||||||||||    
T  33890478 ttcatttatacatttattcttaatacgtgtgaaatgagcaaaagg 33890522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 36649715 - 36649664
Alignment:
Q  235 tttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||||| ||||||||| |||| ||||||||||||||||| |||||| ||||    
T  36649715 tttctctctctttcacttttaca-tttttcttaataagtgtaaaatgaacaaa 36649664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 44225933 - 44225885
Alignment:
Q  222 atttaaaaccatttttctctccctttcacttatacactttttcttaata 270  Q
    ||||||||  ||||||||||  ||||||| |||||||||||||||||||    
T  44225933 atttaaaattatttttctctttctttcacgtatacactttttcttaata 44225885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 44790497 - 44790374
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| |||||| |||||  ||||||| ||  | | ||| |||||||| || | ||  ||| ||||||| ||||||||||| | |||| |||||||    
T  44790497 ccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctctccttcatttataca 44790398  T
Q  258 ctttttcttaataagtgtgaaatga 282  Q
     ||| |||||||| |||||||||||    
T  44790397 -tttgtcttaatacgtgtgaaatga 44790374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 1e-42; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 153 - 317
Target Start/End: Original strand, 28330821 - 28330985
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| ||| ||| ||||| ||||||| ||||||| ||| |||||||||||||||| |||| | ||| ||||||||||||| |||||||||    
T  28330821 cactcccaattcaatataatctgctttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcactt 28330920  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||||||||||||||||||||||||||||  || || ||||||||||||||| ||||| ||||    
T  28330921 atacactttttcttaataagtgtgaaatgagtcaatggctcagttaaaatgggacggagggagta 28330985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 158 - 306
Target Start/End: Original strand, 8759811 - 8759959
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||| || |||||||||||||  | | | ||| ||||||||||||| |||||| |||||||    
T  8759811 ccaattcaatatattctactttgcatttatgataaagaaaaatgcatcaatagttgataagtgaactgaaacccatttttctctctctttcatttataca 8759910  T
Q  258 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    |||||| ||||||||| ||||||||| ||||||||| ||||||||||||    
T  8759911 cttttttttaataagtttgaaatgagtaaaaggttcggttaaaatggga 8759959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 20964368 - 20964204
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||||| | ||||||||||||| ||||| | ||||||| ||| |||||||||||||||||| ||   |||  |||||||||||| |||||||||    
T  20964368 cacttccaattcgatatattctactttgcatttacgataaagaagaatgcaccaatagttgataaagacacgcaaactcatttttctctctctttcactt 20964269  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||||||||||||||||||||||||||||  ||  | ||||||||||||||| ||||| ||||    
T  20964268 atacactttttcttaataagtgtgaaatgagtcaagagctcagttaaaatgggacggagggagta 20964204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 37316002 - 37315838
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||||| |||| |||||  ||||||||||||||||| |||||||||    
T  37316002 cactcccaattcaacatattctactttgcatttatgataaagaaaaatgcactaatagttaataagggcatccaaaaccatttttctctctctttcactt 37315903  T
Q  253 atacac-tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    || ||| ||||||||||||||||| |||||||| ||||  ||| |||||| |||| ||||| ||||    
T  37315902 at-cacttttttcttaataagtgttaaatgagccaaagtctcaattaaaacgggacggagggagta 37315838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 159 - 280
Target Start/End: Original strand, 38319944 - 38320065
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||| | ||| ||||||||||||| |||||||||||||||    
T  38319944 caattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctctctttcacttatacac 38320043  T
Q  259 tttttcttaataagtgtgaaat 280  Q
    ||||||||||||| ||||||||    
T  38320044 tttttcttaataaatgtgaaat 38320065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 159 - 306
Target Start/End: Complemental strand, 32949923 - 32949775
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaa-ccatttttctctccctttcacttataca 257  Q
    |||||||| ||||||||||||  ||||||| ||||||||||| |||||||||||||||||| || | |||| |||||||||| ||  ||||| |||||||    
T  32949923 caattcaatatattctactttacatttatgataaagaaaaatgcaccaatagttgataaagacactcaaaaaccatttttctatctatttcatttataca 32949824  T
Q  258 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    |||||| |||||||||||||||||||  ||||| |||||||||||||||    
T  32949823 cttttttttaataagtgtgaaatgagtcaaaggctcagttaaaatggga 32949775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 153 - 283
Target Start/End: Original strand, 42132840 - 42132972
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggc--atttaaaaccatttttctctccctttcac 250  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||| ||| || |||||||| |||| |||  | | ||| ||||||||||||| |||||||    
T  42132840 cacttccaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagtttataagggcgcactcaaacccatttttctctctctttcac 42132939  T
Q  251 ttatacactttttcttaataagtgtgaaatgag 283  Q
    |||||||||||||||||||||||||||||||||    
T  42132940 ttatacactttttcttaataagtgtgaaatgag 42132972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 49218856 - 49218732
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||| ||||||| ||||||| |||||| || | ||||||||| |||||| |||| |  || ||||||||||||| |||||||||||||||    
T  49218856 caattcaatatattatactttgaatttatgataaagagaa-tgcaccaatagctgataagggcactctaacccatttttctctctctttcacttatacac 49218758  T
Q  259 tttttcttaataagtgtgaaatgagc 284  Q
    ||||||||||||||||||||||||||    
T  49218757 tttttcttaataagtgtgaaatgagc 49218732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 303
Target Start/End: Original strand, 53848679 - 53848823
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| |||| || ||| |||||||||||||||| |||| | |||| ||||||| |||| ||| |||||||||||    
T  53848679 caattcaatatattctactttgcatttatgataaataataatgcaccaatagttgataagggcactcaaaatcatttttttctctcttacacttatacac 53848778  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatg 303  Q
    |||||||||||||  ||||||||| | ||| | ||| ||||||||    
T  53848779 tttttcttaataaacgtgaaatgaaccaaaagctcaattaaaatg 53848823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 159 - 283
Target Start/End: Complemental strand, 48400705 - 48400582
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||  ||||||| ||||||| |||||| ||||| |||||||| ||||| |||| |||||||||||| |||||| |||||||     
T  48400705 caattcaatatattctactttacatttatgataaagaagaatacatcaatacttgataaaagcattaaaaatcatttttctctctctttcatttataca- 48400607  T
Q  259 tttttcttaataagtgtgaaatgag 283  Q
    |||||||||||  ||||||||||||    
T  48400606 tttttcttaatctgtgtgaaatgag 48400582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 283
Target Start/End: Complemental strand, 22020584 - 22020462
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| ||| |||||||  || ||||||||| ||||| | | ||||||||||| ||||| || ||| ||||||||    
T  22020584 caattcaatatattctactttgcatttatgataa-gaaaaatgtacaaatagttgacaaaggaactcaaaaccatttt-ctctcactctcatttatacac 22020487  T
Q  259 tttttcttaataagtgtgaaatgag 283  Q
    |||||||||||||||||||||||||    
T  22020486 tttttcttaataagtgtgaaatgag 22020462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 156 - 317
Target Start/End: Complemental strand, 25902539 - 25902378
Alignment:
Q  156 ttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttata 255  Q
    ||||||||||| |||||| ||||| |||||||   |||||| ||| ||| |||| || | |||  || | ||||||||||| ||  | ||||||||||||    
T  25902539 ttccaattcaatatattcaactttatatttataacaaagaagaatgcactaatacttaacaaaaacactcaaaaccattttacttcctctttcacttata 25902440  T
Q  256 cactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||||||| |||||||||||| |||| | |||||||  |||||| ||||||||||    
T  25902439 cactttttcttaatatgtgtgaaatgaggaaaatgctcagttattatgggacggaggaagta 25902378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 5499440 - 5499349
Alignment:
Q  226 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||| |||||||| || ||||||||||||||||||||||||||| |||| |||||| ||||||| || |||||||||||| ||||| ||||    
T  5499440 aaaactatttttctttctctttcacttatacactttttcttaatatgtgtcaaatgaacaaaaggctcggttaaaatgggacggagggagta 5499349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 198 - 317
Target Start/End: Original strand, 54217441 - 54217562
Alignment:
Q  198 aatacaccaatagttgataaaggcatttaaaaccattttt--ctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcag 295  Q
    ||||||||||||||||| || || | | ||| ||||||||  ||||| |||||||||||||||||||||||||||||| |||||||||  |||||  | |    
T  54217441 aatacaccaatagttgacaagggtactcaaacccatttttttctctctctttcacttatacactttttcttaataagtatgaaatgagtcaaaggccccg 54217540  T
Q  296 ttaaaatgggagggaggaagta 317  Q
    ||||||||||| ||||| ||||    
T  54217541 ttaaaatgggacggagggagta 54217562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 22872462 - 22872303
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaagg--catttaaaaccatttttctctccctttcacttatac 256  Q
    |||||||| |||||| |||||| ||||||| ||| | | ||| |||||||| |||| ||| |  || |||||||||||||||||||   |||||||||||    
T  22872462 caattcaatatattccactttgcatttatgataatggagaatgcaccaatacttgacaaacgagcacttaaaaccatttttctctcttcttcacttatac 22872363  T
Q  257 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    | |||||||||||| |||||||||||||||| || ||| ||||  ||||| ||||| ||||    
T  22872362 a-tttttcttaatatgtgtgaaatgagcaaatggctcacttaatttgggacggagggagta 22872303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 42051736 - 42051627
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||||||  ||||||||||||  ||||||| ||||||| ||| |||||||| ||| ||||| || | |||||||||||||| || |||||| ||    
T  42051736 cacttccaattcattatattctactttacatttatgataaagaagaatgcaccaatacttgctaaagacactaaaaaccatttttctatctctttcattt 42051637  T
Q  253 atacactttt 262  Q
    ||||||||||    
T  42051636 atacactttt 42051627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 18872656 - 18872585
Alignment:
Q  232 atttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatg 303  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||    
T  18872656 atttttcgctctctttcacttatacactttttcttaatacgtgtgaaatgaacaaaatgttcacttaaaatg 18872585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 47277756 - 47277625
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||| ||||||  ||||||| |||||||||||  || ||||  ||| || |||||| ||||  |||||| |||  |||| |||||||||     
T  47277756 caattcaatatattttactttacatttatgataaagaaaaatgtacaaatacctgacaagggcattgaaaaatatttttatctatcttttacttatacat 47277657  T
Q  259 tttttcttaataagtgtgaaatgagcaaaagg 290  Q
    |||||||||||| |||||||||||||||||||    
T  47277656 tttttcttaatatgtgtgaaatgagcaaaagg 47277625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 299
Target Start/End: Complemental strand, 4360482 - 4360343
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||| |||||| ||||||||||  | | ||| |||||||| || | ||| ||| ||||||||||||||||||  | |||| ||||||      
T  4360482 caattcaatatattccactttgcatttatgctagtggagaatgcaccaatacttaacaaaagcacttaaaaccatttttctctttcattcatttatac-t 4360384  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    |||||||||||| ||||||||||| |||| || ||||||||    
T  4360383 tttttcttaatatgtgtgaaatgaacaaatggctcagttaa 4360343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 317
Target Start/End: Complemental strand, 41594864 - 41594764
Alignment:
Q  217 aaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagt 316  Q
    |||||| | ||||||||||||||||| |||||||||| ||||||||||| ||||  |||||||||| ||||||| ||  ||| ||||||| ||||| |||    
T  41594864 aaggcactcaaaaccatttttctctctctttcacttaaacactttttctcaatatatgtgaaatgaacaaaaggctcgcttataatgggacggagggagt 41594765  T
Q  317 a 317  Q
    |    
T  41594764 a 41594764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 152 - 299
Target Start/End: Original strand, 33047518 - 33047664
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||||||||||||| |||||| |||||||||||||| ||  | | |||  ||||||| || | ||| ||| |||||||||||||||||||   ||   |    
T  33047518 tcacttccaattcaatatattccactttgtatttatgatagtggagaatctaccaatacttaacaaaagcacttaaaaccatttttctctcttctttgtt 33047617  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    |||||| |||||||||||| ||||||||||||| || || ||||||||    
T  33047618 tataca-tttttcttaataggtgtgaaatgagctaatggctcagttaa 33047664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 34791026 - 34790903
Alignment:
Q  159 caattcaacatattctactttgta--tttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 256  Q
    |||||||| |||||||||||| ||  |||||| ||||||| ||| ||| |||| |||||||| ||| | |||| |||||||||||| |||||| ||||||    
T  34791026 caattcaatatattctacttt-tacttttatgataaagaagaatgcacaaatacttgataaaagcactcaaaatcatttttctctcactttcatttatac 34790928  T
Q  257 actttttcttaataagtgtgaaatga 282  Q
    || ||||||||||| ||||| |||||    
T  34790927 ac-ttttcttaatatgtgtgcaatga 34790903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 39052975 - 39052835
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| ||||||||| || | |||  | ||||| | || |||||| |||||||     
T  39052975 caattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaagacactcaaattcttttttttttctctttcatttataca- 39052877  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 300  Q
    |||||||||||  |||||||||||| |||  ||||| |||||    
T  39052876 tttttcttaatctgtgtgaaatgagaaaattgttcaattaaa 39052835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 28279866 - 28280029
Alignment:
Q  155 cttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttat 254  Q
    ||||||||| || |||||||||||| |||||||| ||||||||||| |||||||| || | |||| || | ||||| |||| ||| || ||||   ||||    
T  28279866 cttccaattaaatatattctactttatatttatgataaagaaaaatgcaccaatacttaacaaagacactcaaaactatttctctttctcttttctttat 28279965  T
Q  255 acactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtact 319  Q
    ||| |||||||||||   |||||||||   ||  || ||||||||| ||||| ||||||||||||    
T  28279966 aca-tttttcttaatctctgtgaaatggaaaattggctcagttaaactgggacggaggaagtact 28280029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 279
Target Start/End: Original strand, 41436514 - 41436633
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| ||  | | ||| ||||||||  | | ||| ||| |||||||||||||| |||| || ||||||||||||    
T  41436514 caattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttttctctctctcacttatacac 41436613  T
Q  259 tttttcttaataagtgtgaaa 279  Q
     ||||||||||| ||||||||    
T  41436614 -ttttcttaatatgtgtgaaa 41436633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 46958828 - 46958904
Alignment:
Q  235 tttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 311  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||||| |||||   |||||||||| |||| ||||    
T  46958828 tttctctatctttcacttatacactttttcttaatatgtgtgaaatgaacaaaatactcagttaaaaggggacggag 46958904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 8295127 - 8295201
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    ||||||| ||||||||||| |||||| ||||||| |||||||||||  |||||||||||||||| || ||||||||    
T  8295127 ttaaaacaatttttctctctctttcatttataca-tttttcttaatttgtgtgaaatgagcaaatggctcagttaa 8295201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 29550802 - 29550680
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||||||||||  ||||||| |||||||  | ||| ||||| || | ||||||| | ||||| ||||||||||| |||||  |||||||    
T  29550802 ccaattcaatatattctactttacatttatgataaagaatgaaacatcaatacttaaaaaaggcactcaaaactatttttctctctctttcctttataca 29550703  T
Q  258 ctttttcttaataagtgtgaaatg 281  Q
     |||||||||||  ||||||||||    
T  29550702 -tttttcttaatctgtgtgaaatg 29550680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 287
Target Start/End: Original strand, 41203763 - 41203897
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    |||||| |||||||| |||||| |||||||||||||| ||  ||| ||| || ||||| || | ||  ||| | |||||||||||||| || | |||| |    
T  41203763 tcactttcaattcaatatattccactttgtatttatggtagtgaagaatgcatcaatacttaacaagagcactaaaaaccatttttctatctccttcatt 41203862  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||| |||||||||||| |||||||| |||||||    
T  41203863 tataca-tttttcttaatacgtgtgaaacgagcaaa 41203897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 36046039 - 36045994
Alignment:
Q  245 tttcacttatacactttttcttaataagtgtgaaatgagcaaaagg 290  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  36046039 tttctcttatacactttttcttaataagtgtgaaatgagccaaagg 36045994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 287
Target Start/End: Original strand, 49448874 - 49448999
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||| ||||||| ||||||| |||   | ||| ||| |||| |||| ||  ||| ||||||||||||||||||| | ||||||||||||     
T  49448874 caattcaatatattatactttgcatttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccatttttctctctccttcacttataca- 49448972  T
Q  259 tttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||||||||||  |||||||||| ||||    
T  49448973 tttttcttaata--tgtgaaatgaacaaa 49448999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 13529961 - 13530017
Alignment:
Q  226 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 282  Q
    ||||||||||||||||| ||||| ||| |||| |||||||||||| |||||||||||    
T  13529961 aaaaccatttttctctctctttcgcttgtacattttttcttaatatgtgtgaaatga 13530017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 299
Target Start/End: Complemental strand, 42024282 - 42024136
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||||||||||||| |||||| |||||| ||||||  ||  | | |||| ||||||| || | ||  | | ||||||||||||||||||| | |||| |    
T  42024282 tcacttccaattcaatatattccactttgcatttataatagtggagaatagaccaatacttaacaagagtagttaaaaccatttttctctctccttcatt 42024183  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    |||||| ||| |||||||| ||||||  |||||||| || ||||||||    
T  42024182 tataca-tttgtcttaatatgtgtgatttgagcaaatggctcagttaa 42024136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 36047174 - 36047116
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataa 217  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| ||| ||||||||||||    
T  36047174 caattcaatatattctactttgcatttatgataaagaagaatgcactaatagttgataa 36047116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 11583704 - 11583647
Alignment:
Q  254 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 311  Q
    |||| ||||||||||||| |||||||||||| ||||| |||| |||||||||| ||||    
T  11583704 tacattttttcttaataaatgtgaaatgagccaaaggctcagctaaaatgggacggag 11583647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 152 - 287
Target Start/End: Complemental strand, 40021029 - 40020892
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| |||||| || |||||||  |||| || |||| ||| |  |||| |||||||| |||| |||  |||| ||||||||||||||||| | ||||||    
T  40021029 tcactcccaatttaatatattcttttttgcatctatgataatggtaaatgcaccaatacttgacaaaaacattcaaaaccatttttctctctcattcact 40020930  T
Q  252 ta-tacac-tttttcttaataagtgtgaaatgagcaaa 287  Q
    || || || |||||||||||| ||||||||||| ||||    
T  40020929 tagtatacatttttcttaatatgtgtgaaatgaccaaa 40020892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 12619792 - 12619847
Alignment:
Q  231 catttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||||||| | |||||||||||||| ||||||||||||||| |||||||| ||||    
T  12619792 catttttctcgctctttcacttataca-tttttcttaataagtatgaaatgaacaaa 12619847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 287
Target Start/End: Original strand, 17237076 - 17237203
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||| |||||| ||||||| ||   || ||| ||| |||| || | |||  || ||||||| ||||||||||| | |||| ||||| |     
T  17237076 caattcaatatattccactttgcatttatgatagtaaagaatccactaatacttaacaaaatcacttaaaactatttttctctctccttcatttatata- 17237174  T
Q  259 tttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||||||||| ||||||||||||||||    
T  17237175 tttttcttaataggtgtgaaatgagcaaa 17237203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 287
Target Start/End: Complemental strand, 38160226 - 38160099
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||  |||||||||||||| ||| | | ||| || ||||| |||| |||| || ||||||| ||||||||||| | || | |||||||     
T  38160226 caattcaatatatttcactttgtatttatgataatggagaatgcatcaatatttgacaaagacacttaaaacaatttttctctctcctttatttataca- 38160128  T
Q  259 tttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||||||||||  | | |||||||||||    
T  38160127 tttttcttaatatatataaaatgagcaaa 38160099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 10099800 - 10099749
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaata 209  Q
    ||||||||| ||||||||||||  ||||||| ||||||||||| ||||||||    
T  10099800 ccaattcaatatattctactttaaatttatgataaagaaaaatgcaccaata 10099749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 311
Target Start/End: Complemental strand, 35027578 - 35027420
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    |||||| ||||| || |||||  ||||||  |||||| |||  | |||| |||||||| |||| || | |||||||||  ||||||||| |  ||||| |    
T  35027578 tcactttcaatttaatatatttaactttgcgtttatgataataataaatgcaccaatatttgacaa-gacatttaaaattatttttctccctttttcaat 35027480  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggag 311  Q
    |||||||||||| |||||| ||||||||| | |||||   ||||||||||| ||| ||||    
T  35027479 tatacacttttttttaatatgtgtgaaataaacaaaatactcagttaaaataggatggag 35027420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 35998191 - 35998088
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||| ||||||  ||||||| ||||||| |||  ||||||| ||||||||| || | ||||  |||||||  || |||||| ||||||||    
T  35998191 caattcaatatattttactttacatttatgataaagaagaatgtaccaatacttgataaagacactcaaaattatttttcgttcgctttcatttatacac 35998092  T
Q  259 tttt 262  Q
    ||||    
T  35998091 tttt 35998088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 287
Target Start/End: Complemental strand, 41710225 - 41710091
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| |||||| |||||| ||||||| ||  | |||||| ||||||| || | ||  ||| |||||||||||||| ||||   |||| |    
T  41710225 tcactcccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcacttaaaaccatttttttctctgcttcatt 41710126  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||| ||| |||||||| ||||||  ||||||||    
T  41710125 tataca-tttgtcttaatatgtgtgatttgagcaaa 41710091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 1920846 - 1920884
Alignment:
Q  244 ctttcacttatacactttttcttaataagtgtgaaatga 282  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  1920846 ctttcacttatacattttttcttaatatgtgtgaaatga 1920884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 279
Target Start/End: Original strand, 25149479 - 25149604
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaa-gaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    ||||||||||||| |||||| |||||  ||||||| |||| ||  ||| |||||||| || | ||||||| | ||||| ||||||||||| ||||   ||    
T  25149479 acttccaattcaatatattccactttacatttatgataaaagaggaatgcaccaatacttaaaaaaggcactcaaaactatttttctctctcttttcgtt 25149578  T
Q  253 atacactttttcttaataagtgtgaaa 279  Q
    |||||| ||||||||||  ||||||||    
T  25149579 atacac-ttttcttaatctgtgtgaaa 25149604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 280
Target Start/End: Complemental strand, 54729558 - 54729434
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||| |||||| ||||||| ||  | | ||||||| |||| || | |||  || ||||||| ||||||||||| |||||| |||||||     
T  54729558 caattcaatatattccactttgcatttatgatagtggagaatacactaatacttaacaaaaacacttaaaactatttttctctctctttcatttatacat 54729459  T
Q  259 tt---tttcttaataagtgtgaaat 280  Q
    ||   |||||||||| |||||||||    
T  54729458 ttttctttcttaatatgtgtgaaat 54729434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 13719811 - 13719912
Alignment:
Q  162 ttcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacacttt 261  Q
    ||||| ||||| ||||||  ||||||| ||||||| |||||| || || || | |||| || | ||| |||||||||| || |||||| |||||||||||    
T  13719811 ttcaatatattatactttacatttatgataaagaataatacatcattacttaacaaagacactcaaacccatttttctttctctttcatttatacacttt 13719910  T
Q  262 tt 263  Q
    ||    
T  13719911 tt 13719912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 49306621 - 49306718
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||| |||||| |||||| ||||||| ||  | | |||| ||||||| || | ||  ||| ||||||||||||||||||| |||||| |||||||    
T  49306621 aattcaatatattccactttgcatttatgataggggagaatagaccaatacttaacaagagcacttaaaaccatttttctctctctttcatttataca 49306718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 269
Target Start/End: Original strand, 49401686 - 49401798
Alignment:
Q  156 ttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttata 255  Q
    ||||||||||| ||||||||||||  ||||||  ||||||| |||  | ||||| |||| || | |||| ||||| ||||||||||| ||||   |||||    
T  49401686 ttccaattcaatatattctactttacatttataataaagaacaatgtatcaatacttgaaaaggacattcaaaactatttttctctctctttactttata 49401785  T
Q  256 cactttttcttaat 269  Q
    || |||||||||||    
T  49401786 ca-tttttcttaat 49401798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 280
Target Start/End: Original strand, 28974404 - 28974459
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaat 280  Q
    ||||||||| |||| ||||||||||| ||||||| ||| |||||||| |||||||||    
T  28974404 ttaaaaccacttttatctccctttcatttataca-tttgtcttaatatgtgtgaaat 28974459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 38838740 - 38838787
Alignment:
Q  244 ctttcacttatacactttttctta--ataagtgtgaaatgagcaaaag 289  Q
    |||||||||| |||||||||||||  ||| ||||||||||||||||||    
T  38838740 ctttcacttagacactttttcttaatatatgtgtgaaatgagcaaaag 38838787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 52677040 - 52676977
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaa 288  Q
    |||||| |||||||||||  | |||||| ||||| ||||||||||||| | ||||||||||||||    
T  52677040 ttaaaatcatttttctctttcattcactaataca-tttttcttaataaatatgaaatgagcaaaa 52676977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 153 - 317
Target Start/End: Original strand, 13222095 - 13222259
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||||||| ||||| ||||||| ||||||| ||||||| |||||||||||||||||||| |||| | ||| ||||||||||||| |||||||||    
T  13222095 cacttccaattcaatatattttactttgcatttatgataaagaagaatacaccaatagttgataagggcactcaaacccatttttctctctctttcactt 13222194  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||| |||||||||||||||||||||| ||  || || || |||||||||||| ||||| ||||    
T  13222195 atacattttttcttaataagtgtgaaataagtcaatggctcggttaaaatgggacggagggagta 13222259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 154 - 317
Target Start/End: Original strand, 314455 - 314618
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 253  Q
    |||| |||||||| ||||||||||||| ||||||| ||||||| ||| || ||||||||||||| |||| | ||||||||||| ||||| ||||||||||    
T  314455 actttcaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttgataagggcactcaaaaccattttcctctctctttcactta 314554  T
Q  254 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||||||||||||||||||||||  ||  | ||||||||||||||| ||||| ||||    
T  314555 tacactttttcttaataagtgtgaaatgagtcaatcgctcagttaaaatgggacggagggagta 314618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 159 - 312
Target Start/End: Complemental strand, 6972614 - 6972462
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| ||| |||||||||||| |||| | ||||||||||| ||||| ||||||||||||||     
T  6972614 caattcaatatattctactttgcatttatgataaagaagaatgcacaaatagttgataagggcactcaaaaccatttt-ctctctctttcacttatacat 6972516  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 312  Q
    |||||||||||||||||||||||||  ||||  ||||||||||||||| |||||    
T  6972515 tttttcttaataagtgtgaaatgagtcaaagactcagttaaaatgggacggagg 6972462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 4283093 - 4282934
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||||| |||  ||||||| ||||||  ||| |||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||||||    
T  4283093 caattcaatatattctattttacatttatgataaagaggaatgcaccaatacttgataagggcattcaaaaccatttttctctctcttttacttatacac 4282994  T
Q  259 t-ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    | ||||||||||||  || |||||||||||||  |||||||||||| || ||||||||||    
T  4282993 ttttttcttaataaacgtaaaatgagcaaaagactcagttaaaatgagacggaggaagta 4282934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 928603 - 928466
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 267  Q
    |||||||| |||| ||||||| ||||||| ||| ||||||||||||||||||||| | ||| |||||||| | || |||||||||||||  |||||||||    
T  928603 atattctattttgcatttatgataaagaagaatgcaccaatagttgataaaggcactcaaacccattttttt-tctctttcacttatacgttttttctta 928505  T
Q  268 ataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    ||||||||||||||||| || || |||||||||||||||    
T  928504 ataagtgtgaaatgagccaagggctcagttaaaatggga 928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 2048325 - 2048448
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| |||| || ||| ||||||||||||||||  ||| | | ||||||||||||||| ||||||||||||||     
T  2048325 caattcaatatattctactttgcatttatgataaacaagaatgcaccaatagttgataagagcactcataaccatttttctctctctttcacttataca- 2048423  T
Q  259 tttttcttaataagtgtgaaatgag 283  Q
    ||||| |||||||||||||||||||    
T  2048424 ttttttttaataagtgtgaaatgag 2048448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 152 - 283
Target Start/End: Complemental strand, 43950529 - 43950399
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    |||||| |||||||| ||||||||||||| ||||||| ||| | |||||||| ||||| || | |||  |||||||||| ||||||||||| ||||||||    
T  43950529 tcactttcaattcaatatattctactttgcatttatgttaatggaaaatacatcaatacttaacaaaaacatttaaaactatttttctctctctttcact 43950430  T
Q  252 tatacactttttcttaataagtgtgaaatgag 283  Q
    |||||| ||||| |||||||||||||||||||    
T  43950429 tataca-ttttttttaataagtgtgaaatgag 43950399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 158 - 283
Target Start/End: Original strand, 9724910 - 9725034
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||||||| ||| | |||| ||||| |||||| |||||| |||||||    
T  9724910 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaagcactcaaaatcatttctctctctctttcatttataca 9725009  T
Q  258 ctttttcttaataagtgtgaaatgag 283  Q
    | ||||||||||| ||||||||||||    
T  9725010 c-ttttcttaatatgtgtgaaatgag 9725034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 153 - 324
Target Start/End: Complemental strand, 37529151 - 37528981
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    ||||||||||||||  |||||||||||  ||||||| |||||||||||| ||||||| || | |||| || | ||||||||||||||||  | || |||     
T  37529151 cacttccaattcaatttattctactttacatttatgataaagaaaaatagaccaatacttaacaaagacactcaaaaccatttttctctatcctttacta 37529052  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtactttttt 324  Q
    ||| | ||||| |||||||||||||||||| |||| |  ||||||||| ||||| ||||| |||| ||||||    
T  37529051 atata-ttttttttaataagtgtgaaatgaacaaatgactcagttaaattgggacggagggagtaatttttt 37528981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 287
Target Start/End: Original strand, 2427387 - 2427521
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| ||||||||||||| |||||||  |||||| ||| | |||||| || |||| |||||| ||| ||||||||||||   | ||| ||    
T  2427387 cactcccaattcaatatattctactttgcatttatgacaaagaagaatgctccaataattaataagggcattcaaacccatttttctctatatgtcagtt 2427486  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||||||||||||||||| | |||||||||||||    
T  2427487 atacactttttcttaataaatatgaaatgagcaaa 2427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 153 - 288
Target Start/End: Complemental strand, 38873000 - 38872867
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| |||||  ||||| |||||||| ||||||  ||| || ||||||||||||| | || | |||||||||||| | || ||| |||||    
T  38873000 cactcccaattcaatatatt--actttatatttatgataaagaggaatgcatcaatagttgataaggacactcaaaaccatttttttttctcttccactt 38872903  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaa 288  Q
     |||||||||||||||||||| ||||||||||||||    
T  38872902 ttacactttttcttaataagtatgaaatgagcaaaa 38872867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 306
Target Start/End: Original strand, 7213508 - 7213654
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||| |||||  ||||||  ||||||| ||| |||||||| |||||||||||| | |||| ||||||||||||  ||||| |||||||     
T  7213508 caattcaatatattccactttacatttataataaagaagaatgcaccaatatttgataaaggcactcaaaatcatttttctctctatttcatttataca- 7213606  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    |||||||||||  |||||||||||| ||| || ||| ||||| |||||    
T  7213607 tttttcttaatctgtgtgaaatgagaaaatggctcaattaaactggga 7213654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 315
Target Start/End: Complemental strand, 43427167 - 43427005
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttg-ataaaggcatttaaaaccatttttctctccctttcac 250  Q
    ||||| ||||||||| |||||||| |||| ||||||| ||||||| ||| ||| |||||||  | || |||| | ||| | |||||||||||  |||||     
T  43427167 tcactcccaattcaatatattctattttgcatttatgataaagaagaatgcactaatagtttcacaagggcactcaaacctatttttctctc--tttcat 43427070  T
Q  251 ttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaag 315  Q
    |||||||||||||||||| |||| |||||||||  ||  | ||||||||||||||| ||||||||    
T  43427069 ttatacactttttcttaaaaagtatgaaatgagtcaatagctcagttaaaatgggacggaggaag 43427005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 24356143 - 24356265
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||||||||||||||||  ||||||| ||||||| ||| || ||||| |||| ||||||| | ||||| | ||||||||| |||||  |||||||    
T  24356143 ccaattcaacatattctactttacatttatgataaagaagaatgcatcaatacttgaaaaaggcactcaaaactagttttctctctctttcctttataca 24356242  T
Q  258 ctttttcttaataagtgtgaaatg 281  Q
    | ||||||||||  ||||||||||    
T  24356243 c-ttttcttaatctgtgtgaaatg 24356265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 5425969 - 5426031
Alignment:
Q  237 tctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  5425969 tctctctctttcacttatacactttttcttaatacgtgtgaaatgaacaaaaggatcagttaa 5426031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 289
Target Start/End: Complemental strand, 10069659 - 10069530
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||| |||||| ||||||| ||| |  |||| ||| |||| |||| ||| | | |||||| ||||||| |||| |||||||||||| |     
T  10069659 caattcaatatattcgactttgcatttatgataatggtaaatgcacaaatacttgacaaaagtacttaaaatcatttttatctctctttcacttatata- 10069561  T
Q  259 tttttcttaataagtgtgaaatgagcaaaag 289  Q
    ||||||||||| |||||||||||||||||||    
T  10069560 tttttcttaatgagtgtgaaatgagcaaaag 10069530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 38280258 - 38280148
Alignment:
Q  171 ttctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaata 270  Q
    |||||||||  ||||||| ||||||| ||| |||||||| || | ||||||| | |||||||||||||||||  ||||  ||||||| ||||||||||||    
T  38280258 ttctactttacatttatgataaagaagaatgcaccaatatttaaaaaaggcactcaaaaccatttttctctctatttcctttataca-tttttcttaata 38280160  T
Q  271 agtgtgaaatga 282  Q
     |||||||||||    
T  38280159 tgtgtgaaatga 38280148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 279
Target Start/End: Complemental strand, 18181288 - 18181168
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||||||||||| ||||||| ||  | | ||| ||||||||  | | ||| ||| ||||||||||||||||||| || |||||||||||    
T  18181288 ccaattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttctctctctctcacttataca 18181189  T
Q  258 ctttttcttaataagtgtgaaa 279  Q
    | ||||||||||  ||||||||    
T  18181188 c-ttttcttaatctgtgtgaaa 18181168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 31348545 - 31348632
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctcccttt 247  Q
    ||||||| |||||||||| || ||||||| |||| || ||| |||||||||||||||| |||| | ||| ||||||||||||| ||||    
T  31348545 aattcaatatattctactatgcatttatgataaaaaagaatgcaccaatagttgataagggcactcaaacccatttttctctctcttt 31348632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 320
Target Start/End: Complemental strand, 39166771 - 39166606
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||| ||||||  ||||||| |||| || |||  ||  ||| || |||| |||||| |||| ||||||||| || |||||||||||| |    
T  39166771 ccaattcaatatattatactttacatttatgataaaaaagaatgtacacataattaataagggcattcaaaatcatttttctttctctttcacttatata 39166672  T
Q  258 c---tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtactt 320  Q
        ||||| ||||||| |||||||||||||||| | ||| ||||||||||| ||||  |||||||    
T  39166671 tatattttttttaataaatgtgaaatgagcaaaaagctcaattaaaatgggacggagcgagtactt 39166606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 45464228 - 45464162
Alignment:
Q  220 gcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||||||| ||||||| |||| | |||||||||||| |||||||||||| ||||||||||||||||    
T  45464228 gcatttaaaatcatttttttctctcattcacttataca-tttttcttaatatgtgtgaaatgagcaaa 45464162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 1908574 - 1908472
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||| ||| ||| |||| |||  |||| || | |||||||||||||||||  ||||| ||    
T  1908574 cacttccaattcaatatattctactttacatttatgataaagaagaatgcactaatacttgcaaaagacactcaaaaccatttttctctctatttcattt 1908475  T
Q  253 ata 255  Q
    |||    
T  1908474 ata 1908472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 18460521 - 18460642
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||  |||||||  |||||| |||  ||||||| |||| |||| || | |||| ||||||||| || |||||| ||||||||    
T  18460521 caattcaatatattctactttacatttatgacaaagaagaatgtaccaatatttgacaaagacactcaaaatcatttttctatctctttcatttatacac 18460620  T
Q  259 tttttcttaataagtgtgaaatg 281  Q
     ||||||||||  ||||||||||    
T  18460621 -ttttcttaatctgtgtgaaatg 18460642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 36748181 - 36748302
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||| ||||||  ||||||| ||||||| ||  |||||||| |||| ||||| | | ||||| |||||||||||  ||||  ||||||||    
T  36748181 caattcaatatattttactttaaatttatgataaagaataacgcaccaatacttgaaaaaggaactcaaaactatttttctctctatttcttttatacac 36748280  T
Q  259 tttttcttaataagtgtgaaatg 281  Q
     ||||||||||| ||||||||||    
T  36748281 -ttttcttaatatgtgtgaaatg 36748302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 280
Target Start/End: Original strand, 3199925 - 3200049
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| ||||| ||||||| ||||||| ||||   |||| ||| ||||||| | || | || | ||||||||||||||||| |||||| ||    
T  3199925 cactcccaattcaatatattatactttgcatttatgataaa---aaatgcacaaatagttaacaatgacactcaaaaccatttttctctctctttcattt 3200021  T
Q  253 atacactttttcttaataagtgtgaaat 280  Q
    |||||  |||||||||||| | ||||||    
T  3200022 atacatcttttcttaataaatatgaaat 3200049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 14384133 - 14384057
Alignment:
Q  211 ttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaa 288  Q
    ||||||||| |||| ||||||||||||||||| |||||| ||||| | |||||||||||| || |||||||| |||||    
T  14384133 ttgataaag-cattcaaaaccatttttctctctctttcatttatatattttttcttaatatgtatgaaatgaacaaaa 14384057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 279
Target Start/End: Original strand, 31592583 - 31592703
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||||||||||| |||  || ||| || ||||| |||| || | || |  |||| ||||||||||| |||||||||||||||    
T  31592583 caattcaatatattctactttgtatttatgataagaaagaatgcagcaatacttgacaa-gacactcgaaactatttttctctctctttcacttatacac 31592681  T
Q  259 -tttttcttaataagtgtgaaa 279  Q
     ||||| |||||| ||||||||    
T  31592682 ttttttattaatatgtgtgaaa 31592703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 299
Target Start/End: Original strand, 9472455 - 9472594
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||||||| |  ||||||| ||||||| |||  | ||||| |||| |||| || |  |||||||| |||| || |||||| |||||||     
T  9472455 caattcaatatattctactatacatttatgataaagaagaatgtatcaatacttgacaaagacactctaaaccattgttctatctctttcatttataca- 9472553  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    |||||||||||| ||||||||||  |||  |||||||||||    
T  9472554 tttttcttaatatgtgtgaaatggtcaactggttcagttaa 9472594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 32556270 - 32556330
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||| ||||||||||| ||||    
T  32556270 ttaaaaccatttttctctc--tttcacttatacac-ttttcttaatatgtgtgaaatgaacaaa 32556330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 2756700 - 2756829
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    |||||||||||| || ||||||||||||  ||||||| ||| |  |||| ||| |||| |||| ||  ||| ||||||  |||||||||||   |||| |    
T  2756700 tcacttccaatttaatatattctactttacatttatgataatggtaaatgcactaatacttgacaagagcacttaaaataatttttctctcttcttcatt 2756799  T
Q  252 tatacactttttcttaataagtgtgaaatga 282  Q
     ||||| ||||||||||||||||||||||||    
T  2756800 aataca-tttttcttaataagtgtgaaatga 2756829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 6213859 - 6213778
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    |||||| |||||||||||  | |||||| || || |||||||||||||||||||||||||||||||  ||| ||||| |||||    
T  6213859 ttaaaatcatttttctctttcattcactaattca-tttttcttaataagtgtgaaatgagcaaaagactcacttaaattggga 6213778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 14890373 - 14890470
Alignment:
Q  182 atttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 281  Q
    ||||||| ||||||| ||| ||| |||| ||||||||| || | |||||||||||| |||  |||||| ||||||| ||||||||| || ||||||||||    
T  14890373 atttatgataaagaagaatgcactaatacttgataaagacactcaaaaccatttttatct--ctttcatttataca-tttttcttagtatgtgtgaaatg 14890469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 883159 - 883100
Alignment:
Q  227 aaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||||||||||| || ||||||||||||||| ||||||||| | ||||||||||| ||||    
T  883159 aaaccatttttctttctctttcacttatacac-ttttcttaaaatgtgtgaaatgaacaaa 883100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 8550651 - 8550593
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 283  Q
    ||||||||| ||||||||| |||||||||||||| ||||||| |||  ||||||||||||    
T  8550651 ttaaaaccacttttctctctctttcacttataca-tttttctaaatgtgtgtgaaatgag 8550593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 290
Target Start/End: Complemental strand, 12950026 - 12949908
Alignment:
Q  171 ttctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaata 270  Q
    |||||||||| ||||||| |||| |  ||| |||||||| |||| || | || | ||||  |||||| |||| |||||||||||||| |||||| |||||    
T  12950026 ttctactttgcatttatgataaaaaggaattcaccaatacttgacaa-gacactcaaaattatttttttctctctttcacttatacattttttcgtaata 12949928  T
Q  271 agtgtgaaatgagcaaaagg 290  Q
      |||||||||| |||||||    
T  12949927 tatgtgaaatgaacaaaagg 12949908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 28527062 - 28527124
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||||||||||| | || | |||| ||||||| |||||||||||| ||||||||||||||||    
T  28527062 ttaaaaccatttttttttctccttcatttataca-tttttcttaatatgtgtgaaatgagcaaa 28527124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 40965112 - 40965170
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 283  Q
    ||||||| ||||||||||| | |||| ||||||| |||||||||||| ||||||||||||    
T  40965112 ttaaaactatttttctctctccttcatttataca-tttttcttaatacgtgtgaaatgag 40965170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 44736964 - 44737026
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||| ||||||| |||| | || ||||||||| |||||||||||| ||||||||||||||||    
T  44736964 ttaaaatcatttttatctctcattaacttataca-tttttcttaatatgtgtgaaatgagcaaa 44737026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 3123688 - 3123801
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 267  Q
    |||||| | |||||||||||| ||  ||| ||| |||||||| || || || ||| ||||||  |||||||||||   |||| ||||||| |||||||||    
T  3123688 atattccattttgtatttatgatagtgaagaatgcaccaatacttaatgaaagcacttaaaattatttttctctctacttcagttataca-tttttctta 3123786  T
Q  268 ataagtgtgaaatga 282  Q
    ||| |||||||||||    
T  3123787 atatgtgtgaaatga 3123801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 234 - 280
Target Start/End: Complemental strand, 5007240 - 5007194
Alignment:
Q  234 ttttctctccctttcacttatacactttttcttaataagtgtgaaat 280  Q
    ||||||||| |||| |||||||||| ||||||||||| |||||||||    
T  5007240 ttttctctctcttttacttatacacattttcttaatatgtgtgaaat 5007194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 43077763 - 43077678
Alignment:
Q  196 aaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 282  Q
    ||||| ||||||||||| | ||   |||||||||| ||||||||||| | |||| ||||||| ||| |||||||| |||||||||||    
T  43077763 aaaatgcaccaatagttaacaagtacatttaaaactatttttctctctcattcatttataca-tttgtcttaatacgtgtgaaatga 43077678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 44024825 - 44024875
Alignment:
Q  244 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttca 294  Q
    |||||||||||| | |||||||||||| ||||||| ||| |||||||||||    
T  44024825 ctttcacttatagattttttcttaatacgtgtgaagtgaacaaaaggttca 44024875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 257
Target Start/End: Complemental strand, 44424337 - 44424241
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    |||||||| |||||| |||||| ||||||| |||  |||||| || ||||| |||| || | |||| ||||||||||| ||||| ||||||||||||||    
T  44424337 caattcaatatattcaactttgcatttatgataataaaaaatgcatcaatacttgacaa-gacattcaaaaccatttt-ctctctctttcacttataca 44424241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 435087 - 435026
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacac-tttttcttaataagtgtgaaatgagc 284  Q
    ||||||| |||||| |||| |||||| |||||||  |||||||||||| |||||||||||||    
T  435087 ttaaaactatttttgtctctctttcatttatacatatttttcttaatacgtgtgaaatgagc 435026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 10394295 - 10394202
Alignment:
Q  221 catttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||||||  ||||||||||| | |||  ||||||| |||||||||||  ||||||||||| ||||  ||||||||||  ||||| ||||||||||    
T  10394295 catttaaaattatttttctctctccttcttttataca-tttttcttaat--gtgtgaaatgaacaaatagttcagttaatttgggatggaggaagta 10394202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 14306072 - 14306031
Alignment:
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 300  Q
    ||||||||||||| |||||||||||||||| ||||| |||||    
T  14306072 tttttcttaataaatgtgaaatgagcaaaatgttcacttaaa 14306031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 39159717 - 39159780
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 289  Q
    |||||| |||||||||||| || |||||  |||| ||||||| |||||||||||||||||||||||    
T  39159717 ttaaaatcatttttctctctctatcactattaca-tttttct-aataagtgtgaaatgagcaaaag 39159780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 39209477 - 39209414
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 289  Q
    |||||| |||||||||||| || |||||  |||| ||||||| |||||||||||||||||||||||    
T  39209477 ttaaaatcatttttctctctctatcactattaca-tttttct-aataagtgtgaaatgagcaaaag 39209414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 39807268 - 39807355
Alignment:
Q  181 tatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaat 269  Q
    |||||||  ||||||| ||| |||||||| || | ||||||| | |||||||||||||| || |||| | ||||||| |||||||||||    
T  39807268 tatttattataaagaagaatgcaccaatacttcacaaaggcactcaaaaccatttttctttctctttgatttataca-tttttcttaat 39807355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 15371943 - 15371791
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||| ||| ||| |||||||||||| | || | ||||||||||||||||| |||||||||    
T  15371943 cactcccaattcaatatattctactttgcatttatgataaagaagaatgcactaatagttgataa-gacactcaaaaccatttttctctcgctttcactt 15371845  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    ||||||||||||||||||| |||||||||| | || || |||||||||||||||    
T  15371844 atacactttttcttaataattgtgaaatgaaccaagggctcagttaaaatggga 15371791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 15325180 - 15325337
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||| ||| ||||||||||||| ||||| | ||||||| || ||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||    
T  15325180 caatccaatatattctactttgcatttacgataaagaagaacacaccaatagttgataa-ggcattcaaaaccaattttctctctctttcacttatacac 15325278  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||||| |||||||||||  ||  | ||||||||||||||| ||||| ||||    
T  15325279 tttttcttaataattgtgaaatgagtcaagagctcagttaaaatgggacggagggagta 15325337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 159 - 306
Target Start/End: Complemental strand, 15321299 - 15321153
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||  ||||||||||| |||| | || | ||||||| ||||||||| |||||| ||||||||    
T  15321299 caattcaatatattctactttgcatttatgataaagaagaacgcaccaatagtttataa-gacactgaaaaccaattttctctctctttcagttatacac 15321201  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    ||||||||||||| |||||||| ||| || || |||||||||||||||    
T  15321200 tttttcttaataattgtgaaataagccaagggatcagttaaaatggga 15321153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 159 - 304
Target Start/End: Original strand, 15355608 - 15355752
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||  ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| | || | ||||||| |||||||||  ||||||||||||||    
T  15355608 caattcattatattctactttggatttatgataaagaagaatgcaccaatagttgataa-gacactcaaaaccaattttctctctttttcacttatacac 15355706  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgg 304  Q
    ||||||||||||| ||| |||||| | ||  | |||||||||||||    
T  15355707 tttttcttaataattgtaaaatgaaccaagagctcagttaaaatgg 15355752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 34803781 - 34803621
Alignment:
Q  159 caattcaacatattctactttgtatttatgcta--aagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 256  Q
    |||||||| ||||| || |||| ||||||| ||  ||||  ||| || ||||||||||||||| || | ||||||||||| ||||| |||||  ||||||    
T  34803781 caattcaatatattttattttgcatttatgatataaagaggaatgcatcaatagttgataaagacactcaaaaccattttcctctctctttcctttatac 34803682  T
Q  257 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||||||||||||||||||||||||| || || ||| ||||||||||| ||||| ||||    
T  34803681 actttttcttaataagtgtgaaatgagctaagggctcaattaaaatgggacggagggagta 34803621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 317
Target Start/End: Complemental strand, 33921544 - 33921386
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | |||  || | ||||||||||||||||| | |||||| ||| |    
T  33921544 ccaattcaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaacacactcaaaaccatttttctctctccttcactaatata 33921445  T
Q  258 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
     |||||||||||||||| |||||||||||| || ||||||||||||||| ||||| ||||    
T  33921444 -tttttcttaataagtgcgaaatgagcaaatggctcagttaaaatgggacggagggagta 33921386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 159 - 306
Target Start/End: Complemental strand, 15351457 - 15351311
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||| ||| ||||||| ||||||| ||  || ||||||||||||| |||| | |||| || ||||||||| | ||||||||||||     
T  15351457 caattcaatatattctaccttgcatttatgataaagaagaacgcatcaatagttgataa-ggcactaaaaatcaattttctctctcattcacttatacat 15351359  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    ||||||||||||| |||||||||||  || | |||| |||||||||||    
T  15351358 tttttcttaataattgtgaaatgagtcaaggattcaattaaaatggga 15351311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 3166180 - 3166078
Alignment:
Q  161 attcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactt 260  Q
    |||||| ||||||||||||  ||||||| |||||||||||||| ||||| ||| ||||| || | ||||| ||||||||||| |||||| ||||||||||    
T  3166180 attcaatatattctactttacatttatgataaagaaaaatacatcaatacttgttaaagacactcaaaactatttttctctctctttcatttatacactt 3166081  T
Q  261 ttt 263  Q
    |||    
T  3166080 ttt 3166078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 152 - 304
Target Start/End: Complemental strand, 31076005 - 31075854
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| ||||| || |||||||||||| |||  |  ||| ||||||||||||| |||| || | || |||||||||||||| ||||||||    
T  31076005 tcactcccaattcaatatattatattttgtatttatgataagaaggaatgcaccaatagttga-aaagacactcaataccatttttctctctctttcact 31075907  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgg 304  Q
    | |||| |||||||||||  | ||||||||| ||||| | ||| |||||||||    
T  31075906 tgtacattttttcttaatgtgggtgaaatgaacaaaatgatcacttaaaatgg 31075854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 263
Target Start/End: Complemental strand, 3874123 - 3874020
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| |||||| |||||  ||||||| ||||||| ||| |||||||| |||| |||| || | |||| ||||||| |||| |||||| |||||||||    
T  3874123 aattcaatatattcaactttacatttatgataaagaataatgcaccaatacttgacaaagacactcaaaatcatttttttctctctttcatttatacact 3874024  T
Q  260 tttt 263  Q
    ||||    
T  3874023 tttt 3874020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 4552936 - 4553059
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttc-act 251  Q
    |||| |||||| || |||||||| |||| ||||||| ||||||| ||| |||||||||||         | | ||||||||||||||||| ||||  |||    
T  4552936 cactcccaatttaatatattctaatttgcatttatgataaagaagaatgcaccaatagtt---------actcaaaaccatttttctctctctttttact 4553026  T
Q  252 tatacactttttcttaataagtgtgaaatgagc 284  Q
    ||||||  |||||||||||||||||||||||||    
T  4553027 tatacatattttcttaataagtgtgaaatgagc 4553059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 16126318 - 16126402
Alignment:
Q  233 tttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||| |||| ||||| ||| ||||||||||||||||| ||||||||||| |||||   |||||||||||| || ||||| ||||    
T  16126318 tttttttctctctttcgcttttacactttttcttaatacgtgtgaaatgaacaaaatagtcagttaaaatgagacggagggagta 16126402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 3604679 - 3604552
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 253  Q
    ||||||||||||| |||||| |||||| |||||   ||| | | ||| |||||||| || | ||  | | ||||||||||||||||||| |||| | |||    
T  3604679 acttccaattcaatatattccactttgcatttacaataatggagaatgcaccaatacttaacaagagaacttaaaaccatttttctctctcttttattta 3604580  T
Q  254 tacactttttcttaataagtgtgaaatga 282  Q
    |||| ||| |||||||| |||||||||||    
T  3604579 taca-tttgtcttaatatgtgtgaaatga 3604552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 15081521 - 15081580
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 284  Q
    ||||||| ||||||||||| | |||| ||||||| |||||||||||| |||||||||||||    
T  15081521 ttaaaactatttttctctcaccttcatttataca-tttttcttaatacgtgtgaaatgagc 15081580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 33109467 - 33109530
Alignment:
Q  220 gcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 284  Q
    ||||||||||| ||||||||||| | ||||  |||||| |||||||||||| |||||||||||||    
T  33109467 gcatttaaaactatttttctctctcattcatctataca-tttttcttaatacgtgtgaaatgagc 33109530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 20027637 - 20027724
Alignment:
Q  181 tatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaa 268  Q
    |||||||| ||||||| ||| |||||||| || | |||| || | |||| |||||| || |  |||||||||||||||||||||||||    
T  20027637 tatttatgataaagaagaatgcaccaatacttaacaaagacactcaaaatcattttgctatttctttcacttatacactttttcttaa 20027724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 7739530 - 7739465
Alignment:
Q  221 catttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||| |||| |||||||| || |||||||||||||| ||||||||| ||  |||||||||||||||    
T  7739530 cattttaaactatttttctatctctttcacttataca-tttttcttattacatgtgaaatgagcaaa 7739465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 20383944 - 20384030
Alignment:
Q  226 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 312  Q
    |||||||||||| |||| |||||||||| | || ||||||||||| |||| ||| || ||||| ||||| | | ||||||| |||||    
T  20383944 aaaaccatttttttctctctttcacttacataccttttcttaatatgtgttaaaggaacaaaaagttcactaataatgggatggagg 20384030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 280
Target Start/End: Original strand, 31265807 - 31265932
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 253  Q
    ||||||||||||| |||||| |||||  ||||||| ||  | | ||| |||||||| || | ||  ||| ||||||| ||||||||||| | |||| |||    
T  31265807 acttccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaactatttttctctctccttcattta 31265906  T
Q  254 tacactttttcttaataagtgtgaaat 280  Q
    |||| ||| |||||||| |||||||||    
T  31265907 taca-tttgtcttaatatgtgtgaaat 31265932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 33018024 - 33017958
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaag 219  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||| ||||    
T  33018024 cactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaag 33017958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 300
Target Start/End: Complemental strand, 9354505 - 9354374
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 267  Q
    |||||||||| |  ||||||| ||||||| |||  ||||||| || | |||| || | ||||||||||||||||| | |||||| ||| | |||||||||    
T  9354505 atattctactctacatttatgataaagaagaatggaccaatatttaacaaagacactcaaaaccatttttctctctcattcactaatata-tttttctta 9354407  T
Q  268 ataagtgtgaaatgagcaaaaggttcagttaaa 300  Q
    | || ||| |||| |||||| |  |||||||||    
T  9354406 aaaaatgtaaaataagcaaatgactcagttaaa 9354374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 34703643 - 34703792
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggca--tttaaaaccatttttctctccctttcacttatacactttttct 265  Q
    ||||||||||||| |||| || ||| |  |||| |||||||| |||| ||| | |  ||||||||||||| ||| || | |||||  ||||| |||||||    
T  34703643 atattctactttgcatttgtgataatggtaaatgcaccaataattgacaaaagaaaatttaaaaccatttctctatctccttcaccaataca-tttttct 34703741  T
Q  266 taataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||| ||||||||||| ||||| | ||| ||||| ||||| ||||| ||||    
T  34703742 taata-gtgtgaaatgaacaaaatgctcacttaaattgggacggagggagta 34703792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 7e-38; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 153 - 317
Target Start/End: Original strand, 32776010 - 32776174
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| || | ||||||| | ||||||||||||||||| | |||||||    
T  32776010 cactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaaggcactcaaaaccatttttctctctccttcactt 32776109  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||| ||||| | ||||| ||||    
T  32776110 atacactttttcttaatatgtgtgaaatgagcaaaaggctcatttataatggaacggagggagta 32776174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 158 - 317
Target Start/End: Complemental strand, 29997104 - 29996945
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    |||| |||| ||||| ||||||| ||||||| ||||||| ||| |||||||| || | || | |||| |||||||||||||| || ||||||||||||||    
T  29997104 ccaactcaatatattatactttgcatttatgataaagaagaatgcaccaataattaacaaggacattcaaaaccatttttctttctctttcacttataca 29997005  T
Q  258 ctttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| ||| ||||||||||    
T  29997004 ctttttcttaataagtgtgaaatgagtcaaaggctcagttaaaataggacggaggaagta 29996945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 163 - 313
Target Start/End: Original strand, 47238254 - 47238404
Alignment:
Q  163 tcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttt 262  Q
    ||||||| || ||||||| ||||||| ||||||| ||| ||||||| |||||||| |||| | ||||||||||||||||| |||||||||||||||||||    
T  47238254 tcaacattttgtactttgcatttatgataaagaagaatgcaccaattgttgataagggcactcaaaaccatttttctctctctttcacttatacactttt 47238353  T
Q  263 tcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagga 313  Q
    |||||||||||||||||||||| || |  || |||||||||| | ||||||    
T  47238354 tcttaataagtgtgaaatgagccaatgactcggttaaaatggaacggagga 47238404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 153 - 317
Target Start/End: Original strand, 37264340 - 37264502
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||  ||| || ||||| |||| || |||| | |||||||||||||||||  ||||||||    
T  37264340 cactcccaattcaatatattctactttgcatttatgataaagagcaatgcatcaatacttgacaagggcactcaaaaccatttttctctc--tttcactt 37264437  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||| ||||    
T  37264438 atatactttttcttaatatgtgtgaaatgagcaaaaggctcacttaaaatgggacggagggagta 37264502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 159 - 283
Target Start/End: Complemental strand, 32972092 - 32971968
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| |||||||  ||| || ||| |||||||||||||||| |||| | ||||||||||||||||| ||||||||||||||     
T  32972092 caattcaatatattctactttgcatttatgacaaaaaagaatgcaccaatagttgataagggcactcaaaaccatttttctctctctttcacttatacat 32971993  T
Q  259 tttttcttaataagtgtgaaatgag 283  Q
    |||||||||||||||||||||||||    
T  32971992 tttttcttaataagtgtgaaatgag 32971968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 23111159 - 23111039
Alignment:
Q  163 tcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttt 262  Q
    |||| ||||||||||||  ||||||| ||||||| ||| |||||||||||||||||| |||| |||| ||||||||||||  ||||| ||||||| ||||    
T  23111159 tcaatatattctactttacatttatgataaagaagaatgcaccaatagttgataaagacattcaaaatcatttttctctctatttcatttatacattttt 23111060  T
Q  263 tcttaataagtgtgaaatgag 283  Q
    ||||||||||| |||||||||    
T  23111059 tcttaataagtatgaaatgag 23111039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 10355809 - 10355701
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| |||||| |||| |||||||||||||||| | || | |||||||||||| |||| ||| |||||||||||    
T  10355809 caattcaatatattctactttgcatttatgataaagagaaatgcaccaatagttgataaggacactcaaaaccatttttttctctcttacacttatacac 10355710  T
Q  259 tttttctta 267  Q
    |||||||||    
T  10355709 tttttctta 10355701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 249
Target Start/End: Original strand, 38589761 - 38589857
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttca 249  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  38589761 cactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatagttgataagggcattcaaaaccatttttctctctctttca 38589857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 303
Target Start/End: Original strand, 8150001 - 8150135
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 267  Q
    |||||||||||||  |||||| ||| | ||||| ||| |||| |||| |||  || ||||||||||||||||||| |||||||||||||| |||||||||    
T  8150001 atattctactttgattttatgataatggaaaatgcacaaatatttgacaaaa-cacttaaaaccatttttctctctctttcacttatacattttttctta 8150099  T
Q  268 ataagtgtgaaatgagcaaaaggttcagttaaaatg 303  Q
    ||| ||||||||||| || ||| |||| ||| ||||    
T  8150100 atatgtgtgaaatgaacacaagattcatttataatg 8150135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 45218233 - 45218111
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||| ||||||| | ||||| ||||||||||| |||||  |||||||    
T  45218233 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctctctttcctttataca 45218134  T
Q  258 ctttttcttaataagtgtgaaatg 281  Q
    | ||||||||||  ||||||||||    
T  45218133 c-ttttcttaatttgtgtgaaatg 45218111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 2849288 - 2849409
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||| |||| ||   ||||| ||||||||||| |||||| |||||||     
T  2849288 caattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacacgcaaaactatttttctctctctttcatttataca- 2849386  T
Q  259 tttttcttaataagtgtgaaatg 281  Q
    |||||||||||| ||||||||||    
T  2849387 tttttcttaatatgtgtgaaatg 2849409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 33774051 - 33773965
Alignment:
Q  226 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 312  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||  ||||||||||   ||| ||||||||||||||||| |||||    
T  33774051 aaaactatttttctctctctttcacttatacactttttcttaatatatgtgaaatgaattaaaagttcagttaaaatgggacggagg 33773965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 288
Target Start/End: Original strand, 43007927 - 43008057
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac-a 257  Q
    |||||||| |||||||| |||  ||||||| ||||||||||| ||| |||| |||| |||| || | ||||| ||||||| ||| |||||||||||||      
T  43007927 caattcaatatattctaatttaaatttatgataaagaaaaatgcacaaatacttgacaaagacactcaaaactatttttccctctctttcacttatacgt 43008026  T
Q  258 ctttttcttaataagtgtgaaatgagcaaaa 288  Q
     |||||||||| | |||||||||||||||||    
T  43008027 ttttttcttaacatgtgtgaaatgagcaaaa 43008057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 30659560 - 30659433
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||| ||||||| |||||||||||| |||||||| ||||||| ||  ||| |||| |||| ||||||| | ||||| ||||||||||| |||||  ||    
T  30659560 cacttcaaattcaatatattctactttatatttatgataaagaagaacgcacaaatatttgacaaaggcactcaaaactatttttctctctctttccttt 30659461  T
Q  253 atacactttttcttaataagtgtgaaatg 281  Q
     ||||| ||||||||||  ||||||||||    
T  30659460 gtacac-ttttcttaatctgtgtgaaatg 30659433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 9602894 - 9603017
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| || |||||||||| ||||||| |||| || ||| || |||||||| | ||  ||||| ||| | |||||| |||| ||| ||||||| |||    
T  9602894 caattcaatatgttctactttgcatttatgataaaaaagaatgcatcaatagttaacaagcgcattcaaacctatttttttctctcttccacttatgcac 9602993  T
Q  259 tttttcttaataagtgtgaaatga 282  Q
    ||||| ||||||||||||||||||    
T  9602994 ttttttttaataagtgtgaaatga 9603017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 9830465 - 9830588
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| || |||||||||| ||||||| |||| || ||| || |||||||| | ||  ||||| ||| | |||||| |||| ||| ||||||| |||    
T  9830465 caattcaatatgttctactttgcatttatgataaaaaagaatgcatcaatagttaacaagcgcattcaaacctatttttttctctcttccacttatgcac 9830564  T
Q  259 tttttcttaataagtgtgaaatga 282  Q
    ||||| ||||||||||||||||||    
T  9830565 ttttttttaataagtgtgaaatga 9830588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 34064248 - 34064405
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||  ||||||| |||  || ||| |||||||| || | || | || | ||||| |||||||||||  ||||| ||||||||    
T  34064248 caattcaatatattctactttacatttatgataagaaagaatgcaccaatacttaacaa-gacactcaaaactatttttctctctatttcatttatacac 34064346  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||| |||||| |||||||| ||  |||||| |||| ||||| |||||||||| ||||    
T  34064347 ttttttttaatatgtgtgaaaagaaaaaaaggctcagataaaacgggagggagggagta 34064405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 288
Target Start/End: Original strand, 6697130 - 6697242
Alignment:
Q  175 actttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtg 274  Q
    |||||| ||||||| ||| ||||||| ||||||||   || |||  || ||||||  ||||||||||  |||||||||||||| ||||||||||||||||    
T  6697130 actttgcatttatgataatgaaaaatgcaccaatacacgacaaaa-cacttaaaattatttttctctttctttcacttatacattttttcttaataagtg 6697228  T
Q  275 tgaaatgagcaaaa 288  Q
    |||||||| |||||    
T  6697229 tgaaatgaacaaaa 6697242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 168 - 284
Target Start/End: Original strand, 21446478 - 21446594
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctta 267  Q
    ||||| |||||| |||||||| |||| || ||| ||| |||| || |||| | || | ||||  ||||||||||| |||||||||||||| |||||||||    
T  21446478 atattatactttatatttatgataaaaaagaatgcactaataattaataaggacactcaaaattatttttctctctctttcacttatacaatttttctta 21446577  T
Q  268 ataagtgtgaaatgagc 284  Q
    |||||| | ||||||||    
T  21446578 ataagtataaaatgagc 21446594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 306
Target Start/End: Complemental strand, 39143680 - 39143601
Alignment:
Q  227 aaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    |||||||| |||||||  |||||| ||||||||||||||| ||| ||||||||||||||||||  ||| ||| |||||||    
T  39143680 aaaccattattctctctatttcacatatacactttttctttatacgtgtgaaatgagcaaaagactcacttataatggga 39143601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 202 - 324
Target Start/End: Original strand, 27621913 - 27622035
Alignment:
Q  202 caccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaa 301  Q
    |||||||| ||||||| || | | |||| ||||||||| || ||||   ||||||| |||||||||||||||||||||||||  ||  | ||| ||||||    
T  27621913 caccaataattgataagggtactcaaaatcatttttctttctcttttcattatacattttttcttaataagtgtgaaatgagttaagagctcaattaaaa 27622012  T
Q  302 tgggagggaggaagtactttttt 324  Q
    ||||| ||||| |||| ||||||    
T  27622013 tgggacggagggagtagtttttt 27622035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 36070138 - 36070247
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||  ||||||||||||   |||||| ||||||| ||| |||||||| |||| |||| || | ||||||||||| ||||| |||||| |||||||     
T  36070138 caattcagtatattctactttacgtttatgataaagaataatgcaccaatatttgacaaagacactcaaaaccattttcctctctctttcatttataca- 36070236  T
Q  259 tttttcttaat 269  Q
    |||||||||||    
T  36070237 tttttcttaat 36070247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 9658937 - 9658993
Alignment:
Q  226 aaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 282  Q
    ||||||||||||||||| ||||| ||| |||| |||||||||||| |||||||||||    
T  9658937 aaaaccatttttctctctctttcgcttgtacattttttcttaatatgtgtgaaatga 9658993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 11616660 - 11616733
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    ||||||||||||||||||| | |||| |||||||  |||| |||||| |||||||||||||||| || ||||||||    
T  11616660 ttaaaaccatttttctctctccttcatttataca--tttttttaatatgtgtgaaatgagcaaatggctcagttaa 11616733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 18731466 - 18731550
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccattttt 237  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| ||||||||| || | ||||| ||||||    
T  18731466 cacttccaattcaatatattctactttacatttatgataaagaagaattcatcaatacttgataaagacactcaaaacgattttt 18731550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 287
Target Start/End: Complemental strand, 45890888 - 45890805
Alignment:
Q  203 accaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||||| || | ||| ||||||||||||||||||||||| | |||  ||||||| |||||||||||| ||||||||||| ||||    
T  45890888 accaatacttaacaaaagcatttaaaaccatttttctctctccttcttttataca-tttttcttaatacgtgtgaaatgaacaaa 45890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 39343744 - 39343644
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| ||||||||||||  ||||||| ||||||| ||||||| |||| |||| ||| ||| | ||||| ||| ||||||  |||||| |||||||||    
T  39343744 aattcaatatattctactttacatttatgataaagaagaatacacaaatacttgacaaatgcactcaaaacgattgttctct--ctttcatttatacact 39343647  T
Q  260 ttt 262  Q
    |||    
T  39343646 ttt 39343644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 5724724 - 5724660
Alignment:
Q  217 aaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatga 282  Q
    |||||| ||||||| ||||||||||| | |||| ||||||| |||||||||||| |||||||||||    
T  5724724 aaggcacttaaaactatttttctctctccttcatttataca-tttttcttaatacgtgtgaaatga 5724660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 7425957 - 7425829
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaagg-catttaaaaccatttttctctccctttcactt 252  Q
    ||||||||||||| |||||| |||||| ||||||| ||  | | ||| |||||||| || |  |||  || ||||||||||||||||||| | |||| ||    
T  7425957 acttccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaacaagaacacttaaaaccatttttctctctcattcattt 7425858  T
Q  253 atacactttttcttaataagtgtgaaatga 282  Q
    ||||| ||| |||||||| |||||||||||    
T  7425857 ataca-tttgtcttaatacgtgtgaaatga 7425829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 205 - 289
Target Start/End: Complemental strand, 36194684 - 36194599
Alignment:
Q  205 caatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactt-tttcttaataagtgtgaaatgagcaaaag 289  Q
    ||||| || |||||||||||||||||||||||||| || |  ||| ||||||| || |||||||| || ||||||||||| |||||    
T  36194684 caataattaataaaggcatttaaaaccatttttctttctcgctcatttatacatttctttcttaacaaatgtgaaatgagtaaaag 36194599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 279
Target Start/End: Complemental strand, 3667951 - 3667832
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||  ||||||| |||  || ||| ||| |||| ||||||| | || | ||||  ||||||||||   ||||||||||||||    
T  3667951 caattcaatatattctactttacatttatgataagaaataatgcactaatacttgataa-gacactcaaaattatttttctctttttttcacttatacac 3667853  T
Q  259 tttttcttaataagtgtgaaa 279  Q
    | |||||||||| ||||||||    
T  3667852 tatttcttaatatgtgtgaaa 3667832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 442
Target Start/End: Complemental strand, 13590918 - 13590862
Alignment:
Q  386 catgatttcatcaatctagtccttagagaaattaacataacaatgatgaaaaacaaa 442  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||| || | |||||||    
T  13590918 catgatttcgtcaatctggtccttagagaaattagcataacaataatcagaaacaaa 13590862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 14648993 - 14648862
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataa-aggc-atttaaaaccatttttctctccctttcacttatac 256  Q
    |||||||| ||||||||| ||| ||||||| ||| || |||| |||||||| |||| || |  | | |||||| |||||||||||  |||||||||||||    
T  14648993 caattcaatatattctaccttgcatttatgataatgagaaatgcaccaataattgacaagacactaattaaaatcatttttctctttctttcacttatac 14648894  T
Q  257 actttttcttaataagtgtgaaatgagcaaaa 288  Q
    | ||||||   ||| ||| |||||||||||||    
T  14648893 attttttcaatatatgtgcgaaatgagcaaaa 14648862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 24288456 - 24288539
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctc 242  Q
    |||||||| ||||||||||||  ||||||| ||||||| ||| ||| |||| |||| ||||||| | ||||| |||| ||||||    
T  24288456 caattcaatatattctactttacatttatgataaagaagaatgcacaaatacttgaaaaaggcactcaaaactatttatctctc 24288539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 287
Target Start/End: Original strand, 29257573 - 29257707
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| |||||| |||||| ||||||| ||  | |||||| ||||||| || | ||  ||| |||||||||||||| ||||   |||| |    
T  29257573 tcactcccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagagcacttaaaaccatttttttctctgcttcatt 29257672  T
Q  252 tatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||| ||| |||||||| ||||||  ||||||||    
T  29257673 tataca-tttgtcttaatatgtgtgatttgagcaaa 29257707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 37490692 - 37490570
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| |||||| |||||| ||||||| ||  | | ||| |||||||| || | |||  || |||||| |||||||||||| | |||| |||||||     
T  37490692 caattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaaaaaaacacttaaaatcatttttctctctccttcatttataca- 37490594  T
Q  259 tttttcttaataagtgtgaaatga 282  Q
    |||||||||| | |||||||||||    
T  37490593 tttttcttaacatgtgtgaaatga 37490570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 39498768 - 39498838
Alignment:
Q  221 catttaaaaccatttttctctccctttcacttatacact--ttttcttaataagtgtgaaatgagcaaaag 289  Q
    |||||||||| ||||||||||| | |||||| ||||  |  |||| |||||||||||||||||||||||||    
T  39498768 catttaaaactatttttctctctcattcactaatactatattttttttaataagtgtgaaatgagcaaaag 39498838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 44604487 - 44604413
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    |||||| |||||||||||| | |||| ||||||| ||| |||||||| ||||||  |||||||| |||||||||||    
T  44604487 ttaaaatcatttttctctctccttcatttataca-tttgtcttaatatgtgtgatttgagcaaatggttcagttaa 44604413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 275
Target Start/End: Complemental strand, 37496392 - 37496354
Alignment:
Q  237 tctctccctttcacttatacactttttcttaataagtgt 275  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  37496392 tctctctctttcacttatacactttttcttaatatgtgt 37496354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 281
Target Start/End: Original strand, 23058916 - 23058972
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatg 281  Q
    ||||||| ||||||||||| |||||| ||||| | |||||||||||| ||||||||||    
T  23058916 ttaaaactatttttctctctctttcatttatata-tttttcttaatacgtgtgaaatg 23058972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 31549597 - 31549556
Alignment:
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 300  Q
    ||||||||||||||||| |||||||||||||  |||||||||    
T  31549597 tttttcttaataagtgtaaaatgagcaaaagactcagttaaa 31549556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 33584589 - 33584694
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| |||||| | |||| ||||||| ||  | | |||||||||||| || | ||  ||| ||||||||||||||||||| | |||| |    
T  33584589 tcactcccaattcaatatattccattttgcatttatgatactggagaatacaccaatacttaacaatagcacttaaaaccatttttctctctccttcatt 33584688  T
Q  252 tataca 257  Q
    ||||||    
T  33584689 tataca 33584694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 49100509 - 49100453
Alignment:
Q  227 aaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 284  Q
    |||| ||||||||||  |||||| ||||||| |||||||||||| |||||||||||||    
T  49100509 aaactatttttctctgtctttcatttataca-tttttcttaatacgtgtgaaatgagc 49100453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 30463114 - 30463173
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 284  Q
    ||||||| ||||||||||| | |||| ||||||| |||||||||||| | |||||||||||    
T  30463114 ttaaaactatttttctctctcattcatttataca-tttttcttaatacgcgtgaaatgagc 30463173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 32346635 - 32346679
Alignment:
Q  244 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaa 288  Q
    |||||||||||  |||||||||||||| ||||||||||| |||||    
T  32346635 ctttcacttatttactttttcttaatatgtgtgaaatgaacaaaa 32346679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 312
Target Start/End: Complemental strand, 40023800 - 40023649
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| ||||| ||||||| ||||||| ||| || |||| | | |||| |||| || | || | ||||| |||||||||||  ||||| ||||| | |    
T  40023800 aattcaatatattttactttgcatttatggtaaggagaaatgctctaatatttgacaa-gacactcaaaacaatttttctctctttttcaattatatatt 40023702  T
Q  260 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 312  Q
    |||||||||||  |||||||| | ||||| | ||| ||||| ||||| |||||    
T  40023701 ttttcttaatacatgtgaaattaacaaaaagctcacttaaagtgggatggagg 40023649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 4e-36; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 5147570 - 5147413
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| | || | |||| |||||||||||  |||||||||||| | |    
T  5147570 aattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataaggacactcaaaatcatttttctctttctttcacttatatatt 5147471  T
Q  260 ttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||||||||||||||||  ||||  ||||||||||||||| ||||| ||||    
T  5147470 ttttcttaataagtgtgaaatgagtcaaagactcagttaaaatgggacggagggagta 5147413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 38978937 - 38979095
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    ||||| || ||||||||||||| ||||||| ||||||  |||  |||||||||| |||| |||| | |||||||||||||| || ||||| ||| |||||    
T  38978937 caatttaatatattctactttgcatttatgataaagaggaatgtaccaatagttaataagggcactcaaaaccatttttctatctctttcccttgtacac 38979036  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||| ||||| ||||    
T  38979037 tttttcttaataagtgtgaaatgagtaaatggctcagttaaaatgggacggagggagta 38979095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 153 - 300
Target Start/End: Complemental strand, 13016444 - 13016298
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| ||||||||||||| ||||||| |||||| || | |||||||||||||||| | || | |||  |||||||||||| |||||||||    
T  13016444 cactcccaattcaatatattctactttgcatttatgataaagagaa-tgcaccaatagttgataaggacactcaaactcatttttctctctctttcactt 13016346  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 300  Q
     ||||||||||||||||||||||||||||||| || |||||| |||||    
T  13016345 ttacactttttcttaataagtgtgaaatgagccaagggttcaattaaa 13016298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 15564963 - 15564810
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    ||||| || ||||||||||||| ||||||| ||||     || |||||||||||||||| || | | ||||  ||||||||||| |||||||||||||||    
T  15564963 caatttaatatattctactttgcatttatgataaa-----atgcaccaatagttgataagggtactcaaaattatttttctctctctttcacttatacac 15564869  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||||||||||||||||||||||| ||||  |||| |||||||||| ||||||||||    
T  15564868 tttttcttaataagtgtgaaatgagcgaaagactcagctaaaatgggatggaggaagta 15564810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 13087816 - 13087676
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||| ||||||| |||||| || | |||||||||||||||| | || | |||  |||||||||||| ||||||||| |||||    
T  13087816 caattcaatatattctactttgcatttatgataaagagaa-tgcaccaatagttgataaggacactcaaactcatttttctctctctttcacttttacac 13087718  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaa 300  Q
    |||||||||||||||||||||||||| || |||||| |||||    
T  13087717 tttttcttaataagtgtgaaatgagccaagggttcaattaaa 13087676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 153 - 319
Target Start/End: Complemental strand, 5357898 - 5357733
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||| ||| ||||||||||||  ||||||| ||||||| |||  ||||||| || | |||| || | ||||||||||||||||| | ||||||     
T  5357898 cacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacactcaaaaccatttttctctctccttcacta 5357799  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtact 319  Q
    ||| | |||||||||||||||||| |||||||||| |||||| ||||| ||||| ||||| ||||||    
T  5357798 atata-tttttcttaataagtgtgtaatgagcaaatggttcaattaaattgggacggagggagtact 5357733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 42818938 - 42819060
Alignment:
Q  161 attcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactt 260  Q
    |||||| ||||||||||||  ||||||| ||||||| ||| |||||||  || |||| |||| | |||||||||||||| || |||| ||||||||||||    
T  42818938 attcaatatattctactttacatttatgataaagaagaatgcaccaatgattaataagggcactcaaaaccatttttctttctcttttacttatacactt 42819037  T
Q  261 tttcttaataagtgtgaaatgag 283  Q
    |||||||||||||||||||||||    
T  42819038 tttcttaataagtgtgaaatgag 42819060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 169 - 305
Target Start/End: Original strand, 4194975 - 4195112
Alignment:
Q  169 tattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac-tttttctta 267  Q
    |||||||||||  ||||||| ||||||| ||| || |||||||| |||| |||| | ||||||||||||||||| |||| |||||||||| |||||||||    
T  4194975 tattctacttttcatttatgataaagaagaatgcatcaatagttcataagggcactcaaaaccatttttctctctcttttacttatacacttttttctta 4195074  T
Q  268 ataagtgtgaaatgagcaaaaggttcagttaaaatggg 305  Q
    |||||||||||||| |  || || ||||||||||||||    
T  4195075 ataagtgtgaaatgcgtcaagggctcagttaaaatggg 4195112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 159 - 304
Target Start/End: Original strand, 31090337 - 31090482
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||| | |||||||||||||  |||||| ||||||| ||| |||||||||||||||| |||| | |||| ||||||||||||  |||||||||||||     
T  31090337 caattccatatattctactttgcgtttatgataaagaagaatgcaccaatagttgataagggcactcaaaatcatttttctctctttttcacttatacat 31090436  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgg 304  Q
    ||||||||||||| ||| |||||||  || |  |||||||||||||    
T  31090437 tttttcttaataaatgtaaaatgagtcaaggactcagttaaaatgg 31090482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 154 - 317
Target Start/End: Complemental strand, 16926171 - 16926006
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 253  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| || |  |||||| | ||||||||||||||| | ||||||||||    
T  16926171 acttccaattcaatatattctactttccatttatgataaagaagaatgcaccaatacttaacgaaggcactcaaaaccatttttctcactctttcactta 16926072  T
Q  254 ---tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
       ||||||| || |||||| ||||||||||||||||||| ||| ||| ||||||| ||||| ||||    
T  16926071 tactacacttctt-ttaatatgtgtgaaatgagcaaaagggtcaattataatgggacggagggagta 16926006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 39060503 - 39060340
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||| ||| ||| ||||||||| ||||||| ||||||| |||  ||||||| || | ||| ||| | ||||||||||||||||| | ||||||     
T  39060503 cacttccaatacaatatagtctactttgcatttatgataaagaagaatggaccaatacttaacaaatgcactcaaaaccatttttctctctccttcacta 39060404  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||| | ||||||||||||||||||||||||||||| |||||| ||||| ||| | ||||| ||||    
T  39060403 atata-tttttcttaataagtgtgaaatgagcaaatggttcaattaaattggaacggagggagta 39060340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 25111229 - 25111078
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| |||| |||| || | ||||| ||||||||||  |||||||||    
T  25111229 cacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaactatttttctct--ctttcactt 25111132  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
     ||| | ||||||||||| ||||||||||||||||| | ||| ||| |||||||    
T  25111131 ttactccttttcttaatatgtgtgaaatgagcaaaatgctcacttataatggga 25111078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 25170320 - 25170169
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||| ||| || ||||| |||| |||| || | ||||| ||||||||||  |||||||||    
T  25170320 cacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaactatttttctct--ctttcactt 25170223  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
     ||| | ||||||||||| ||||||||||||||||| | ||| ||| |||||||    
T  25170222 ttactccttttcttaatatgtgtgaaatgagcaaaatgctcacttataatggga 25170169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 319
Target Start/End: Original strand, 31196352 - 31196512
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||| ||| ||||||||||||| || |||  ||||||||||| || |||||  ||| || | || | ||||| |||||||| || |||||| |||||||     
T  31196352 caatccaatatattctactttgcatgtataataaagaaaaatgcagcaataaatgacaaggacactcaaaactatttttctatctctttcatttatacat 31196451  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagtact 319  Q
     ||||||||||||||||||||||||| ||   |||||||||||||||| ||||||||||||    
T  31196452 attttcttaataagtgtgaaatgagccaagaattcagttaaaatgggacggaggaagtact 31196512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 152 - 283
Target Start/End: Complemental strand, 11099559 - 11099429
Alignment:
Q  152 tcacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcact 251  Q
    ||||| ||||||||| |||||| |||||||||||||| ||  | | ||| |||||||| || | |||  || ||||||| ||||||||||| |||||| |    
T  11099559 tcactcccaattcaatatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaacacttaaaactatttttctctctctttcatt 11099460  T
Q  252 tatacactttttcttaataagtgtgaaatgag 283  Q
    |||||| |||||||||||| ||||||||||||    
T  11099459 tataca-tttttcttaatatgtgtgaaatgag 11099429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 25108600 - 25108751
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||||||| ||||| ||||||  ||||||| ||||||| ||| || ||||| || | |||| || | ||||| ||||||||||  |||||||||    
T  25108600 cacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaactatttttctct--ctttcactt 25108697  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
     ||| | ||||||||||| |||||||||||| |||| | ||| ||| |||||||    
T  25108698 ttactccttttcttaatatgtgtgaaatgagaaaaatgctcacttataatggga 25108751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 25167692 - 25167843
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||||||| ||||| ||||||  ||||||| ||||||| ||| || ||||| || | |||| || | ||||| ||||||||||  |||||||||    
T  25167692 cacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaactatttttctct--ctttcactt 25167789  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
     ||| | ||||||||||| |||||||||||| |||| | ||| ||| |||||||    
T  25167790 ttactccttttcttaatatgtgtgaaatgagaaaaatgctcacttataatggga 25167843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 39061028 - 39060868
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac--- 256  Q
    ||||||| ||||||||||||| ||||||| ||||||| ||| ||| | | ||||| || | || | |||  |||||||||||| |||||||||||||       
T  39061028 aattcaatatattctactttgcatttatgataaagaagaatgcactagtggttgacaaggacactcaaactcatttttctctctctttcacttatactac 39060929  T
Q  257 actttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    | |||||||||||||||||||||||||  ||||  | | ||||||||||| ||||| ||||    
T  39060928 attttttcttaataagtgtgaaatgagtcaaagtctaaattaaaatgggacggagggagta 39060868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 15898224 - 15898321
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatac 256  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||| || |||||||| |||| | || |||||  |||||||||||| |||||||||||||    
T  15898224 caattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttaataaggacacttaaactcatttttctctctctttcacttatac 15898321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 7871344 - 7871405
Alignment:
Q  157 tccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaa 218  Q
    ||||||| || ||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  7871344 tccaatttaatatattctactttacatttatgataaagaaaaatacaccaatagttgataaa 7871405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 301
Target Start/End: Original strand, 35988661 - 35988808
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||| ||||||||| |||||| |||||| ||||||| |||  |  ||| |||||||| |||| ||   || ||||||| |||||||||||  ||||||||    
T  35988661 cactcccaattcaatatattcaactttgcatttatgataagaatgaatgcaccaatacttgacaaca-cacttaaaactatttttctctctgtttcactt 35988759  T
Q  253 atacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaa 301  Q
    ||| | ||||||||||||  ||||||||||  |||||||||| ||||||    
T  35988760 ataaattttttcttaatatatgtgaaatgaaaaaaaggttcatttaaaa 35988808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 42575718 - 42575591
Alignment:
Q  154 acttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactta 253  Q
    ||||||||||||| |||||| |||||| ||||||| ||  | | |||||||||||| ||   ||  ||| ||||||||||||||||||| | |||| |||    
T  42575718 acttccaattcaatatattccactttgcatttatgatagtggagaatacaccaatacttaccaagagcacttaaaaccatttttctctctcattcattta 42575619  T
Q  254 tacactttttcttaataagtgtgaaatga 282  Q
    |||| ||| |||||||| |||||||||||    
T  42575618 taca-tttgtcttaatatgtgtgaaatga 42575591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 4044553 - 4044433
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| |||||||| ||||| |||| | ||||| | | | ||||| |||||||    
T  4044553 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaagcattcaaaatc-ttttttttttcttttcatttataca 4044455  T
Q  258 ctttttcttaataagtgtgaaat 280  Q
    | ||||||||||  |||||||||    
T  4044454 c-ttttcttaatctgtgtgaaat 4044433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 289
Target Start/End: Complemental strand, 6173055 - 6172926
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||| ||||||| ||||||| ||| |  |||| ||  |||| |||||||  ||| ||||||| |||||| ||||   |||||| |||||     
T  6173055 caattcaatatattatactttgcatttatgataatggtaaatgcattaatatttgataagagcacttaaaactatttttatctcttcttcactaataca- 6172957  T
Q  259 tttttcttaataagtgtgaaatgagcaaaag 289  Q
    ||||||||||||||||||||||||| |||||    
T  6172956 tttttcttaataagtgtgaaatgaggaaaag 6172926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 289
Target Start/End: Complemental strand, 7311254 - 7311128
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| ||||||||||||| ||||||| ||| |  |||| ||| |||| |||||||  ||| ||||||||||||||||||  |||| | | ||||| |    
T  7311254 aattcaatatattctactttgcatttatgataatggtaaatgcacaaatacttgataagagcacttaaaaccatttttctct--cttttattaataca-t 7311158  T
Q  260 ttttcttaataagtgtgaaatgagcaaaag 289  Q
    |||||||||||||| |||||| || |||||    
T  7311157 ttttcttaataagtatgaaatcagtaaaag 7311128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 36006973 - 36006849
Alignment:
Q  153 cacttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcactt 252  Q
    |||||||||||||  ||||||||||||  ||||||| ||||||| ||| ||| |||| |||| |||| || ||||||||||||   |||| |||| | ||    
T  36006973 cacttccaattcagtatattctactttacatttatgataaagaagaatgcacaaatacttgacaaagacacttaaaaccattt---tctctcttttattt 36006877  T
Q  253 atacactttttcttaataagtgtgaaatg 281  Q
    ||||| |||||||||||  ||||||||||    
T  36006876 ataca-tttttcttaatctgtgtgaaatg 36006849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 6629391 - 6629318
Alignment:
Q  239 tctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggagg 312  Q
    |||| |||||| |||||||||||||||||||| |||||||| ||  |||||| |||| |||||||||| |||||    
T  6629391 tctctctttcatttatacactttttcttaatatgtgtgaaaagaaaaaaaggctcagataaaatgggacggagg 6629318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 317
Target Start/End: Original strand, 35666922 - 35667073
Alignment:
Q  163 tcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttt 262  Q
    |||| ||||||||||||||||||||  ||| |  |||| |||||||| || | ||| ||| ||||||| ||||||||||||  |||| | ||| | ||||    
T  35666922 tcaatatattctactttgtatttataataatggtaaatgcaccaatacttaagaaaagcacttaaaactatttttctctcc--ttcaataata-aatttt 35667018  T
Q  263 tcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    ||||||||| |||||||||||  ||||  ||| ||||| |||||| |||| ||||    
T  35667019 tcttaataaatgtgaaatgagtgaaagactcacttaaattgggagagagggagta 35667073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 22983076 - 22983134
Alignment:
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||||||||| ||||||||||| ||||| ||| ||||||||||||| ||||| ||||    
T  22983076 tttttcttaatatgtgtgaaatgaacaaaatgtttagttaaaatgggacggagggagta 22983134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 792095 - 792168
Alignment:
Q  244 ctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||| |||||||||| | |||||||||  |||||||||||||||| | ||| ||| |||||||| |||||||||    
T  792095 cttttacttatacacatattcttaatatatgtgaaatgagcaaaatgctcacttataatgggagagaggaagta 792168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 287
Target Start/End: Complemental strand, 41594878 - 41594795
Alignment:
Q  203 accaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||||| |||| |||  |||||||||  ||||||||||| | |||||||||| | |||||||||||| || |||||||||||||    
T  41594878 accaatacttgacaaaaacatttaaaattatttttctctctcattcacttatata-tttttcttaatatgtatgaaatgagcaaa 41594795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 858433 - 858495
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    |||||||||||||| |||| | || | ||||||| |||||||||||| ||||||||||||||||    
T  858433 ttaaaaccatttttttctctcctttatttataca-tttttcttaatatgtgtgaaatgagcaaa 858495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 3725284 - 3725342
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 283  Q
    ||||||||||||||||||| | |||  ||||||| |||||||||||| ||||||||||||    
T  3725284 ttaaaaccatttttctctctccttcctttataca-tttttcttaatatgtgtgaaatgag 3725342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 15898605 - 15898668
Alignment:
Q  254 tacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||| |||||||||||||||||||||||| | ||||  ||| ||||||||||| ||||| ||||    
T  15898605 tacattttttcttaataagtgtgaaatgaactaaagactcatttaaaatgggacggagggagta 15898668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 25344742 - 25344692
Alignment:
Q  232 atttttctctccctttcacttatacactttttcttaataagtgtgaaatgag 283  Q
    ||||||||||| |||||||||||||| ||||||||| || ||||||||||||    
T  25344742 atttttctctctctttcacttataca-tttttcttagtatgtgtgaaatgag 25344692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 35012851 - 35012812
Alignment:
Q  232 atttttctctccctttcacttatacactttttcttaataa 271  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  35012851 atttttctttctctttcacttatacactttttcttaataa 35012812  T

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Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 35968762 - 35968857
Alignment:
Q  168 atattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacacttttt 263  Q
    |||||||||||| |||||||  ||||||| |||  || |||| |||| |||| || | ||||| |||||||| || |||||| |||||||||||||    
T  35968762 atattctactttatatttataataaagaagaatgtactaatacttgacaaagacactcaaaactatttttctttctctttcatttatacacttttt 35968857  T

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Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 42211427 - 42211489
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaa 287  Q
    ||||||||||||||||| | | |||| ||||||| ||||| |||||| ||||||||||||||||    
T  42211427 ttaaaaccatttttctcccaccttcatttatacatttttt-ttaatatgtgtgaaatgagcaaa 42211489  T

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Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 39212550 - 39212500
Alignment:
Q  239 tctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaag 289  Q
    |||| |||||||||||||| |||||||||||| | ||||||||| ||||||    
T  39212550 tctctctttcacttatacaatttttcttaatatgcgtgaaatgaacaaaag 39212500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 288
Target Start/End: Original strand, 4475276 - 4475405
Alignment:
Q  156 ttccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttata 255  Q
    |||||||||||||| ||| |||||| ||||||| ||| |   ||| |||||||| |||| || | || | || |  ||||||||||  ||||||||||||    
T  4475276 ttccaattcaacattttccactttgcatttatgataatggtgaatgcaccaatacttgacaaggacactcaaca--atttttctctttctttcacttata 4475373  T
Q  256 cactttttcttaataagtgtgaaatgagcaaaa 288  Q
    ||| ||||||||||| ||||| ||||| |||||    
T  4475374 cac-ttttcttaatatgtgtgcaatgaacaaaa 4475405  T

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Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 287
Target Start/End: Original strand, 33988232 - 33988360
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| |||||| |||||  ||||||| ||  | | |||||||||||| || | |||  || |||||||||||||||| || | |||| |||||||    
T  33988232 ccaattcaatatattccactttacatttatgatagtggagaatacaccaatacttaacaaaaacacttaaaaccatttttctttctccttcatttataca 33988331  T
Q  258 ctttttcttaataagtgtgaaatgagcaaa 287  Q
     ||| |||||||| ||||||  ||||||||    
T  33988332 -tttgtcttaatatgtgtgatttgagcaaa 33988360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 39035914 - 39035834
Alignment:
Q  175 actttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttata 255  Q
    |||||||| ||||| ||||||  ||| ||| ||||| || ||| |||||| ||||| |||||||| || ||||||||||||    
T  39035914 actttgtagttatgataaagaggaatgcactaatagctggtaagggcattcaaaacaatttttctatctctttcacttata 39035834  T

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Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 41184758 - 41184817
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagc 284  Q
    ||||||| |||||||| || | |||| ||||||| |||||||||||| |||||||||||||    
T  41184758 ttaaaactatttttctttctccttcatttataca-tttttcttaatacgtgtgaaatgagc 41184817  T

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Target: scaffold0576 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 159 - 304
Target Start/End: Original strand, 598 - 742
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||  ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| | || | ||||||| |||||||||  ||||||||||||||    
T  598 caattcattatattctactttggatttatgataaagaagaatgcaccaatagttgataa-gacactcaaaaccaattttctctctttttcacttatacac 696  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgg 304  Q
    ||||||||||||| ||| |||||| | ||  | |||||||||||||    
T  697 tttttcttaataattgtaaaatgaaccaagagctcagttaaaatgg 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 306
Target Start/End: Complemental strand, 10864 - 10717
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca-c 258  Q
    ||||||| ||||| ||||||| ||||||| ||||||| |||  ||||||||||||||| | || | ||| ||||||||||||| |||||||||| |||      
T  10864 aattcaatatattttactttgcatttatgataaagaagaatgaaccaatagttgataaggacactcaaacccatttttctctctctttcacttacacatt 10765  T
Q  259 tttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatggga 306  Q
    ||||||||||||| |||||||||||| || |  |||||||||||||||    
T  10764 tttttcttaataactgtgaaatgagccaatgactcagttaaaatggga 10717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 7960 - 7838
Alignment:
Q  193 agaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggtt 292  Q
    |||||||| ||||||||||||||||||||| | ||||  |||||||||||  ||||| ||||||| ||||||||||||| |||||||||||  || || |    
T  7960 agaaaaatgcaccaatagttgataaaggcactcaaaataatttttctctc--tttcatttatacattttttcttaataaatgtgaaatgagtcaagggct 7863  T
Q  293 cagttaaaatgggagggaggaagta 317  Q
    || ||||||| ||| ||||| ||||    
T  7862 caattaaaataggacggagggagta 7838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 284
Target Start/End: Complemental strand, 12509 - 12385
Alignment:
Q  160 aattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacact 259  Q
    ||||||| ||||||||||||  ||||||  ||||||| ||| ||| |||| |||| |||| || | ||||||||| ||| ||| |||||| ||||||  |    
T  12509 aattcaatatattctactttacatttataataaagaagaatgcactaatacttgacaaagacactcaaaaccattattcactctctttcatttatacgtt 12410  T
Q  260 ttttcttaataagtgtgaaatgagc 284  Q
    ||||||||||| |||||||||||||    
T  12409 ttttcttaatacgtgtgaaatgagc 12385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 98923 - 98997
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaa 299  Q
    |||||| |||||||||||| | |||| ||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  98923 ttaaaatcatttttctctctcattcatttataca-tttttcttaatatgtgtgaaatgaacaaatggttcagttaa 98997  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 352536 - 352415
Alignment:
Q  158 ccaattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttataca 257  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||||| || | |||| || | ||||  ||||||||||  |||| | |||||||    
T  352536 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaagacactcaaaattatttttctct--cttttatttataca 352439  T
Q  258 ctttttcttaataagtgtgaaatga 282  Q
    | ||||||||||  |||||||||||    
T  352438 c-ttttcttaatctgtgtgaaatga 352415  T

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Target: scaffold0578 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 4438 - 4484
Alignment:
Q  234 ttttctctccctttcacttatacactttttcttaataagtgtgaaat 280  Q
    ||||||||| |||| |||||||||| ||||||||||| |||||||||    
T  4438 ttttctctctcttttacttatacacattttcttaatatgtgtgaaat 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 9618 - 9503
Alignment:
Q  167 catattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacactttttctt 266  Q
    ||||||| |||||| ||||||| ||| | | ||||||  |||| || | ||  ||| ||||||||||||||||||| | |||| ||||||  ||||||||    
T  9618 catattccactttgcatttatgataatggagaatacattaatacttaacaagagcacttaaaaccatttttctctctccttcatttatactttttttctt 9519  T
Q  267 aataagtgtgaaatgagc 284  Q
    ||||  ||||||||||||    
T  9518 aata--tgtgaaatgagc 9503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 280
Target Start/End: Original strand, 5851 - 5969
Alignment:
Q  159 caattcaacatattctactttgtatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctccctttcacttatacac 258  Q
    |||||||| ||||||||||||  ||||||| ||||||  ||| || ||||| ||||||||| || | || | |||||||||||  |||| | ||||||||    
T  5851 caattcaatatattctactttacatttatgataaagagcaatgcatcaatacttgataaagacactcaagatcatttttctct--cttttatttatacac 5948  T
Q  259 tttttcttaataagtgtgaaat 280  Q
     ||||||||||  |||||||||    
T  5949 -ttttcttaatttgtgtgaaat 5969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 158068 - 158134
Alignment:
Q  181 tatttatgctaaagaaaaatacaccaatagttgataaaggcatttaaaaccatttttctctcccttt 247  Q
    ||||||||  |||||| || ||| ||||||||||||| | |||| ||||||||||||||||| ||||    
T  158068 tatttatgacaaagaagaaaacatcaatagttgataaggacattcaaaaccatttttctctctcttt 158134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 280
Target Start/End: Original strand, 14554 - 14609
Alignment:
Q  224 ttaaaaccatttttctctccctttcacttatacactttttcttaataagtgtgaaat 280  Q
    ||||||| |||||| |||||| |||| ||||||| |||||||||||| |||||||||    
T  14554 ttaaaactatttttatctccccttcatttataca-tttttcttaatacgtgtgaaat 14609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 220132 - 220212
Alignment:
Q  237 tctctccctttcacttatacactttttcttaataagtgtgaaatgagcaaaaggttcagttaaaatgggagggaggaagta 317  Q
    |||||| || || |||||||||| ||||||| |||||||||||||||| ||    |||||||||||| || ||||| ||||    
T  220132 tctctctctctctcttatacactctttcttagtaagtgtgaaatgagccaataactcagttaaaatgcgacggagggagta 220212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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