View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18260_low_6 (Length: 249)
Name: NF18260_low_6
Description: NF18260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18260_low_6 |
 | |
|
| [»] scaffold0182 (2 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 21764119 - 21764364
Alignment:
| Q |
1 |
cacacccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21764119 |
cacacccaagttgttgtcaataggtcctatccatcatgacagatcagatctgaagttaggagagaagtacaagcttaagtgggcagcagaatacatagaa |
21764218 |
T |
|
| Q |
101 |
aacactgcacttaatccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaa |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||| ||||| |
|
|
| T |
21764219 |
aacaccgcacttaatccagaggaactacaccaaaagattgctgataacatcgatgaactgaagggtcgttttagcgatgatgttttaactttaactggaa |
21764318 |
T |
|
| Q |
201 |
agtctcttgaaggctttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21764319 |
agtctcttgaaggctttcatagccttgaagaaaagttgtcgtggat |
21764364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 249
Target Start/End: Original strand, 21704702 - 21704948
Alignment:
| Q |
3 |
cacccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaa |
102 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
21704702 |
cacccaagttagtgtcgataggtcctatccatcatgacaatccaactctgaagttaggagagaagtacaagcttatgtgggcagcaaaatacatagaaaa |
21704801 |
T |
|
| Q |
103 |
cactgcacttaatccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaag |
202 |
Q |
| |
|
||| | ||||| ||||||||||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| ||| |||||||| ||| ||||| |
|
|
| T |
21704802 |
caccggacttattccagaggaactacacaaaaagattgcagataacattgatgaactgaagggtcgttttagcgatgatgttttaactctaaccggaaac |
21704901 |
T |
|
| Q |
203 |
tctcttgaaggctttcatagccttgaagaaaagttgtcgtggatatt |
249 |
Q |
| |
|
|||||| |||||||| | ||||||| |||||| ||||||||||||| |
|
|
| T |
21704902 |
tctcttcaaggctttgagtgccttgatgaaaagctgtcgtggatatt |
21704948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 21628184 - 21628427
Alignment:
| Q |
3 |
cacccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaa |
102 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||| || |||||| |||||||||||||||||||| ||||||| || ||||||||||||| |
|
|
| T |
21628184 |
cacccaagtttgtgtcaataggtcctatccatcatggcagtacaaatctgaacataggagagaagtacaagcttgtgtgggcatcaaaatacatagaaaa |
21628283 |
T |
|
| Q |
103 |
cactgcacttaatccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaag |
202 |
Q |
| |
|
|| || ||||| ||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||| |||||| ||||| ||||| |
|
|
| T |
21628284 |
cattggacttattccagaggaactacacaaaaagattgctgataacattgatgaactgaagggtcgttttagcgacgatgttttaaatttaacgggaaac |
21628383 |
T |
|
| Q |
203 |
tctcttgaaggctttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
|||||| |||||||| |||||||||||||| |||||||||| |
|
|
| T |
21628384 |
tctcttcaaggctttggatgccttgaagaaaagctgtcgtggat |
21628427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 246
Target Start/End: Original strand, 21788290 - 21788531
Alignment:
| Q |
5 |
cccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaaca |
104 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| || || ||| ||||||||||||||||||||||| |||||||||| ||||||| ||||||| |
|
|
| T |
21788290 |
cccaagttgttgtcggtaggtcctatccatcatgacaacacaaatttgaagttaggagagaagtacaagcttatgtgggcagcaaaatacatcgaaaaca |
21788389 |
T |
|
| Q |
105 |
ctgcacttaatccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaagtc |
204 |
Q |
| |
|
||| || | ||||||||| || |||||| ||||||| ||||| || |||||||||||||||| |||| |||||||| |||||||||||| ||| ||||| |
|
|
| T |
21788390 |
ctggacacattccagaggatctgcacaaaaagattgcagataacattgatgaactgaagggtcattttggcgacgatgttttaactttaactggcaagtc |
21788489 |
T |
|
| Q |
205 |
tcttgaaggctttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
||||||||||||| ||||| ||||||||| |||||||||| |
|
|
| T |
21788490 |
tcttgaaggctttggaagcctcgaagaaaagctgtcgtggat |
21788531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 21808254 - 21808011
Alignment:
| Q |
3 |
cacccaagttgttgtcaataggtcctatccatcatg-acagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaa |
101 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||| | | || | |||||| ||||||||||||||||||||||| |||| | || |||||||||||| |
|
|
| T |
21808254 |
cacccaagttggtatcaataggtcctatccatcatggaaatataa-atctgaagttaggagagaagtacaagcttatgtggtctgcgaaatacatagaaa |
21808156 |
T |
|
| Q |
102 |
acactgcacttaatccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaa |
201 |
Q |
| |
|
||| | ||| || |||||| ||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||| |||||||||||| || | |
|
|
| T |
21808155 |
acagcggctttattctagaggatctacacaaaaagattgctgataacatcgatgaactgaagggtcattttggcgacgatgttttaactttaaccggcca |
21808056 |
T |
|
| Q |
202 |
gtctcttgaaggctttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||| ||||| |
|
|
| T |
21808055 |
gtctcttgaaggctttggtagccttgaagaaaagctgtcatggat |
21808011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 249
Target Start/End: Original strand, 21664157 - 21664406
Alignment:
| Q |
3 |
cacccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaa |
102 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| || ||||||||| |||||||| |||||||||||||| |||||||||| ||||||| ||||| |
|
|
| T |
21664157 |
cacccaagttcctgtcaataggtcctatccatcatggcaatacagatctgaagttaggagggaagtacaagcttatgtgggcagcaaaatacattgaaaa |
21664256 |
T |
|
| Q |
103 |
cactgcacttaatccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgat---attttaactttaagtgga |
199 |
Q |
| |
|
|| ||| |||||| ||| ||||||||| ||||| |||||| ||||||||||||||||||| |||| ||| ||| ||||||||||||| || |
|
|
| T |
21664257 |
tacaagactcaatccacgggatctacacaaaaagatttttgataacatcgatgaactgaagggtcattttgacgatgatgtaattttaactttaaccggc |
21664356 |
T |
|
| Q |
200 |
aagtctcttgaaggctttcatagccttgaagaaaagttgtcgtggatatt |
249 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
21664357 |
aagtctcttgaaggctttggaagccttgaagaaaagctgtcgtggatatt |
21664406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 21652142 - 21652371
Alignment:
| Q |
17 |
tcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaacactgcacttaatc |
116 |
Q |
| |
|
||||||||||||||||||||||||| || || ||| ||||||| |||| ||||||| |||||||||| ||||||||||||||| | ||| || |
|
|
| T |
21652142 |
tcaataggtcctatccatcatgacaatacaaatatgaaaccaggagaggagtataagcttatgtgggcagcaaaatacatagaaaacaacggctttattc |
21652241 |
T |
|
| Q |
117 |
cagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaagtctcttgaaggctt |
216 |
Q |
| |
|
|||||| | ||||||| ||||||| |||||||| | ||||| ||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
21652242 |
tagaggatcgacacaaaaagattgccgataaaattaacgaactaaagggtcattttagcgacgatgttttaactttaactggcaagtctcttgaaggctt |
21652341 |
T |
|
| Q |
217 |
tcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
| |||||||||||||||||||||||||||| |
|
|
| T |
21652342 |
tgatagccttgaagaaaagttgtcgtggat |
21652371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 246
Target Start/End: Original strand, 21681711 - 21681952
Alignment:
| Q |
5 |
cccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaaca |
104 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| || ||||||| | ||||||||||||||||||||||| |||||||||| ||||||| |||||| |
|
|
| T |
21681711 |
cccaagtttgtgtcaataggtcctatccatcatggcaatacagatctaaagttaggagagaagtacaagcttatgtgggcagcaaaatacatcaaaaaca |
21681810 |
T |
|
| Q |
105 |
ctgcacttaatccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaagtc |
204 |
Q |
| |
|
||| | | || | |||| ||| ||||| | ||||||||||| || |||||| ||||||| | ||||||||||||| |||||||||||| || |||| |
|
|
| T |
21681811 |
ctggaagcattcaaaaggatctatacaaaaaaattgctgataacattgatgaattgaagggccattttagcgacgatgttttaactttaaccggcgagtc |
21681910 |
T |
|
| Q |
205 |
tcttgaaggctttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| || ||||| |
|
|
| T |
21681911 |
tcttgaaggctatcatagccttgaagaaaagttatcatggat |
21681952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 21623252 - 21623495
Alignment:
| Q |
3 |
cacccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaa |
102 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| || || |||||| ||||||||||||||||||||||| |||||||||| ||||||| |||| |
|
|
| T |
21623252 |
cacccaagttggtgtcaataggtcctatccatcatggcaatacaaatctgaagttaggagagaagtacaagcttatgtgggcagcaaaatacatcaaaaa |
21623351 |
T |
|
| Q |
103 |
cactgcacttaa-tccaga-ggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaa |
200 |
Q |
| |
|
||| || || | |||| ||| | ||||| ||||||||||||| || |||||||||||||||| |||||| |||||| |||||||||||| |||| |
|
|
| T |
21623352 |
cac--cagaaaagttcagaaggatatgcacaacaagattgctgataatattgatgaactgaagggtcattttagtgacgatgttttaactttaaccggaa |
21623449 |
T |
|
| Q |
201 |
agtctcttgaaggctttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
||||||||||||||||| |||| || |||||||| |||||||||| |
|
|
| T |
21623450 |
agtctcttgaaggctttggtagcattaaagaaaagctgtcgtggat |
21623495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 249
Target Start/End: Original strand, 21646804 - 21647048
Alignment:
| Q |
5 |
cccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaaca |
104 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| || | |||| | |||||||||| |||||||||| |||||||||| ||||||| |||||| |
|
|
| T |
21646804 |
cccaagttggtgtcaataggtcctatccatcatgacaatccaaagctgaagataggagagaaatacaagcttatgtgggcagcaaaatacatcaaaaaca |
21646903 |
T |
|
| Q |
105 |
ctgcacttaatccaga-ggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaagt |
203 |
Q |
| |
|
| | | ||| ||| ||| ||||||||| |||||| ||||| || |||||||||||||||| |||||||||||| |||||||||| | || |||| |
|
|
| T |
21646904 |
cgggaag-aattaagaaggatctacacaaaaagattgtagataacattgatgaactgaagggtcattttagcgacgacgttttaactttgaccggcaagt |
21647002 |
T |
|
| Q |
204 |
ctcttgaaggctttcatagccttgaagaaaagttgtcgtggatatt |
249 |
Q |
| |
|
||||| ||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
21647003 |
ctcttaaaggcttccgtagccttgaagaaaagttgtcgtggatatt |
21647048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 246
Target Start/End: Original strand, 21725967 - 21726198
Alignment:
| Q |
15 |
tgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaacactgcacttaa |
114 |
Q |
| |
|
|||||||||||||||| |||||| | | || ||||||| |||| |||| ||||||| |||| |||||||||| |||||||||||||||| | || | |
|
|
| T |
21725967 |
tgtcaataggtcctattcatcatcagaacacaaatctgatattagcagagtagtacaaacttatgtgggcagcaaaatacatagaaaacaccggacacat |
21726066 |
T |
|
| Q |
115 |
tccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaagtctcttgaaggc |
214 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||| || |||||||||||||||| |||| ||||||| ||||| ||| || || |||||||| |||| |
|
|
| T |
21726067 |
tccagaggatctacacaaaaagattgctgataacattgatgaactgaagggtcattttgacgacgatgttttagcttcaaccagatggtctcttgcaggc |
21726166 |
T |
|
| Q |
215 |
tttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
|||| |||||||||||||||| |||||||||| |
|
|
| T |
21726167 |
tttcgtagccttgaagaaaagctgtcgtggat |
21726198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 21745591 - 21745834
Alignment:
| Q |
3 |
cacccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaa |
102 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||| || |||| | | |||||| |||| ||||||| |||||||||| ||||| | || || |
|
|
| T |
21745591 |
cacccaagttggtgtcattaggtcctatccatcatgacaatccaaatctaaagacaggagaagagtataagcttatgtgggcagcaaaatacctcgagaa |
21745690 |
T |
|
| Q |
103 |
cactgcacttaatccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaag |
202 |
Q |
| |
|
|| | | |||||| | || || |||||| |||||| |||||| || |||||||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
21745691 |
tacaggccacaatccacacgatctgcacaaaaagattgttgataacattgatgaactgaagggtcgttttagcgacgatgttttaactttaactggaaat |
21745790 |
T |
|
| Q |
203 |
tctcttgaaggctttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
|||||| |||||||| | |||||||||||||| |||||||||| |
|
|
| T |
21745791 |
tctcttcaaggctttgaatgccttgaagaaaagctgtcgtggat |
21745834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 246
Target Start/End: Original strand, 21772032 - 21772263
Alignment:
| Q |
15 |
tgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaacactgcacttaa |
114 |
Q |
| |
|
|||||||||||||||| |||||| | | || ||||||| |||| |||||||||||| |||| |||||||||| ||||||||||||| | | | | |
|
|
| T |
21772032 |
tgtcaataggtcctattcatcatcataacacaaatctgatattagcagagaagtacaaacttatgtgggcagcaaaatacatagaaaataacggatacat |
21772131 |
T |
|
| Q |
115 |
tccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaagtctcttgaaggc |
214 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||| || |||||||||||||||| |||| ||| ||| ||||||||| || || |||||||| |||| |
|
|
| T |
21772132 |
tccagaggatctacacaaaaagattgctgataacattgatgaactgaagggtcattttgacgatgatgttttaacttcaaccagatggtctcttgcaggc |
21772231 |
T |
|
| Q |
215 |
tttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |
|
|
| T |
21772232 |
tttcgtagccttgaagaaaagttgtcgtggat |
21772263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 48 - 246
Target Start/End: Original strand, 21992286 - 21992484
Alignment:
| Q |
48 |
atctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaacactgcacttaatccagaggaactacacaaacagattgctgataa |
147 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| | | |||||||||| || ||||||||| ||||| ||||| |
|
|
| T |
21992286 |
atctgaagttaggagagaagtacaagcttacgtgggcagcaaaatacatcgaaaatgcaggacttaatccatgcgatctacacaaaaagattatcgataa |
21992385 |
T |
|
| Q |
148 |
aatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaagtctcttgaaggctttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
|| |||||||||||||||| |||||| |||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||| ||||| |
|
|
| T |
21992386 |
cattgatgaactgaagggtcattttagtgacgatgttttaactttagctggaaagtctcttgaaggctttggaagcctcgaagaaaagctgtcatggat |
21992484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 15713682 - 15713925
Alignment:
| Q |
3 |
cacccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaa |
102 |
Q |
| |
|
|||| |||||| | |||||||| |||||||||||||||| || |||| | || ||| |||||||||||||||| |||||| ||| ||||||| |||| |
|
|
| T |
15713682 |
cacctaagttggtttcaataggccctatccatcatgacaatacaaatctaaagtcaggggagaagtacaagcttatgtgggcggcaaaatacatcaaaaa |
15713781 |
T |
|
| Q |
103 |
cactgcacttaatccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaag |
202 |
Q |
| |
|
||||| | | || ||||||||| |||||| ||||||||||||| || |||||||||||| ||| |||||| |||||| |||||||||||| |||||| |
|
|
| T |
15713782 |
cactggaagcattctagaggaactgcacaaaaagattgctgataacattgatgaactgaagtgtcattttagtgacgatgttttaactttaaccggaaag |
15713881 |
T |
|
| Q |
203 |
tctcttgaaggctttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
|| ||| |||| ||| |||||| ||||||||| |||| ||||| |
|
|
| T |
15713882 |
tcacttcaaggatttggtagcctagaagaaaagctgtcatggat |
15713925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 21714242 - 21714485
Alignment:
| Q |
3 |
cacccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaa |
102 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||| || |||||| | ||||||||||||||| |||| |||||||||| ||||||||||||| |
|
|
| T |
21714242 |
cacccaagtttgtgtcattaggtcctatccatcatgacaatccaaatctgaagaaaggagagaagtacaaacttatgtgggcagcaaaatacatagaaaa |
21714341 |
T |
|
| Q |
103 |
cactgcacttaatccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaag |
202 |
Q |
| |
|
||| || | ||||||||| ||||||||| ||||||| ||||| || |||||||||||||||| |||| | ||||| ||||| ||| || | | |
|
|
| T |
21714342 |
caccagacacattccagaggatctacacaaaaagattgcagataacattgatgaactgaagggtcattttgacaacgatgttttagcttcaaccagttgg |
21714441 |
T |
|
| Q |
203 |
tctcttgaaggctttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
||||||||||||||| |||||||||||||||| | |||||||| |
|
|
| T |
21714442 |
tctcttgaaggctttggtagccttgaagaaaagctatcgtggat |
21714485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 21785465 - 21785708
Alignment:
| Q |
3 |
cacccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaa |
102 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||| || |||||| | |||||||||||||||||||| |||||| ||| ||||| | || || |
|
|
| T |
21785465 |
cacccaagttagtgtcaataggtcctatccatcatgacaatccaaatctgaagacaggagagaagtacaagcttatgtgggccgcaaaatacctcgagaa |
21785564 |
T |
|
| Q |
103 |
cactgcacttaatccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaag |
202 |
Q |
| |
|
| | | |||||| || ||||||||| ||||||| ||||| || ||||||||||||||| ||||||||| ||| |||||||||||| || || |
|
|
| T |
21785565 |
tataggccgcaatccacgcgatctacacaaaaagattgccgataacattaatgaactgaagggtcattttagcgatgatgttttaactttaaccggccag |
21785664 |
T |
|
| Q |
203 |
tctcttgaaggctttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
|||||||||| |||| |||||||||||||||| |||||||||| |
|
|
| T |
21785665 |
tctcttgaagactttggtagccttgaagaaaagctgtcgtggat |
21785708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 249
Target Start/End: Original strand, 21792084 - 21792316
Alignment:
| Q |
17 |
tcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaacactgcacttaatc |
116 |
Q |
| |
|
||||||||||| |||||||||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| |||| |||| | | || |
|
|
| T |
21792084 |
tcaataggtcccatccatcatggcagtacagatctggagttaggagagaagtacaagcttatgtgggcagcagaatacatcaaaaaaactgaaagcattc |
21792183 |
T |
|
| Q |
117 |
cagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaagtctcttgaaggctt |
216 |
Q |
| |
|
| || || |||||| ||||||| ||||| || ||| ||||||| |||||||||||| ||| |||||||||||| | ||||||||||| ||||| |
|
|
| T |
21792184 |
tgaaagatctgcacaaaaagattgccgataacattgatacgctgaaggatcgttttagcgatgatgttttaactttaacccgcaagtctcttgacggctt |
21792283 |
T |
|
| Q |
217 |
tcatagccttgaagaaaagttgtcgtggatatt |
249 |
Q |
| |
|
| |||||| ||||||||| |||| |||||||| |
|
|
| T |
21792284 |
tggtagcctcgaagaaaagctgtcatggatatt |
21792316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 246
Target Start/End: Original strand, 21689479 - 21689715
Alignment:
| Q |
10 |
gttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaacactgca |
109 |
Q |
| |
|
|||| |||||| ||||||||||||||||| || | ||| | ||||||||||||||||||||||| |||||||||| ||||||| ||||||||| | |
|
|
| T |
21689479 |
gttgatgtcaaaaggtcctatccatcatggcaataaatctctaaagttaggagagaagtacaagcttatgtgggcagcaaaatacatcaaaaacactgga |
21689578 |
T |
|
| Q |
110 |
cttaatccagaggaa-ctacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagtggaaagtctctt |
208 |
Q |
| |
|
| || ||||| | ||||||||| | |||| |||||| || ||| |||||||||||| |||| |||||| ||||||| || | ||||| ||||| |
|
|
| T |
21689579 |
agcattc-agagggatctacacaaaaacattgttgataacattgataaactgaagggtcattttgatgacgatgttttaacattgaccggaaattctctc |
21689677 |
T |
|
| Q |
209 |
gaaggctttcatagccttgaagaaaagttgtcgtggat |
246 |
Q |
| |
|
||||||||| |||| |||||||||||| | |||||||| |
|
|
| T |
21689678 |
gaaggctttgatagtcttgaagaaaagctatcgtggat |
21689715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 25370 - 25486
Alignment:
| Q |
4 |
acccaagttgttgtcaataggtcctatccatcatgacagatcagatctgatgttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaac |
103 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25370 |
acccaagttggtgtcaataggtcctatccatcatgacaataaaaatctgaagttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaac |
25469 |
T |
|
| Q |
104 |
actgcacttaatccaga |
120 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
25470 |
actccacttaatccaga |
25486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 242
Target Start/End: Original strand, 25526 - 25671
Alignment:
| Q |
97 |
agaaaacactgcacttaatccagaggaactacacaaacagattgctgataaaatcgatgaactgaagggtcgttttagcgacgatattttaactttaagt |
196 |
Q |
| |
|
||||||| ||||||||| ||||| ||||| ||||| |||||| ||| | ||| || | ||||||||| ||||||||| ||| |||||||||||| | |
|
|
| T |
25526 |
agaaaactttgcacttaaagcagagaaactatacaaaaagattgatgaagacatcaataatttgaagggtcattttagcgaggatgttttaactttaact |
25625 |
T |
|
| Q |
197 |
ggaaagtctcttgaaggctttcatagccttgaagaaaagttgtcgt |
242 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||| |||||| |
|
|
| T |
25626 |
aaaaagtctcttgaaggctttggtacccttgaagaaaagctgtcgt |
25671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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