View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18261_high_31 (Length: 256)
Name: NF18261_high_31
Description: NF18261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18261_high_31 |
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Alignment Details
Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 24809159 - 24809394
Alignment:
| Q |
1 |
tacattatacaatacaagtataaaacccttacatgagtaaatgaacatgtaattatatgtatacatgaaaacataatataaactctgaaacacatacata |
100 |
Q |
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| T |
24809159 |
tacattatacaatacaagtataaaacccttacatgagtaaatgaacatgtaattatatgtatacatgaaaacataatataaactctgaaacacatacata |
24809258 |
T |
|
| Q |
101 |
attgttgtggacaacaactgagagagtatctcagcaaaaacatgtagtcagagaaaacaacagtgactnnnnnnntagttgagatgaacatggtgacata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
24809259 |
attgttgtggacaacaactgagagagtatctcagcaaaaacatgtagtcagagaaaacaacagtgactaaaaaaatagttgagatgaacatggtgacata |
24809358 |
T |
|
| Q |
201 |
tgtttcagtttctttgattattatcatgtctctttg |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
24809359 |
tgtttcagtttctttgattattatcatgtctctttg |
24809394 |
T |
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