View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18261_low_29 (Length: 262)
Name: NF18261_low_29
Description: NF18261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18261_low_29 |
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Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 43596368 - 43596610
Alignment:
| Q |
1 |
gaaagcaagtgattcttgattagatttagaaagctgcatcacatcaccgaaagcagtaatatgaacaggacctttaatcccgttcgctctaacggcgtca |
100 |
Q |
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| T |
43596368 |
gaaagcaagtgattcttgattagatttagaaagctgcatcacatcaccgaaagcagtaatatgaacaggacctttaatcccgttcgctctaacggcgtca |
43596467 |
T |
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| Q |
101 |
gtgattgacggggctactctggaaacgttaaggccgaccggcacgctgcagttctcgaaatcccaccaaacagaaaccctaacgtttcgtgactcgtcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
43596468 |
gtgattgacggggctactctggaaacgttaaggccgaccggcacgctgcagttctcgaaatcccaccacacagaaaccctaacgtttcgtgactcgtcat |
43596567 |
T |
|
| Q |
201 |
cgagacgcttccagtgagaatacgacggagccggagaagatga |
243 |
Q |
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| T |
43596568 |
cgagacgcttccagtgagaatacgacggagccggagaagatga |
43596610 |
T |
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