View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18263_high_14 (Length: 303)
Name: NF18263_high_14
Description: NF18263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18263_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 18 - 298
Target Start/End: Complemental strand, 1906808 - 1906528
Alignment:
| Q |
18 |
cctttaatctaaaattaattactattttacactatgaatgcataattattatgttctgttgttgcttttgtattttaggttcacacgagtacattgaagt |
117 |
Q |
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| T |
1906808 |
cctttaatctaaaattaattactattttacactatgaatgcataattattatgttctgttgttgcttttgtattttaggttcacacgaatacattgaagt |
1906709 |
T |
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| Q |
118 |
gattgcaagcacaacaacaaggaagaaacaagtaagatttctgattgaattggaattgaaagagcagttccagattgcaaaagcaggtgaagaataccag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1906708 |
gattgcaagcacaacaacaaggaagaaacaagtaagatttctgattgaattggaattgaaagagcagttccagattgcaaaagcaggtgaagaataccag |
1906609 |
T |
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| Q |
218 |
aaacttgtgtcttgtttgcctgaattttatgtcgggaagccagagtacttaaccgcgattgttcgacttgtctgtgctgct |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
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| T |
1906608 |
aaacttgtgtcttgtttgcctgaattttatgtcgggaagccagagtacttaaccgcgattgttcgacttgtgtgtgatgct |
1906528 |
T |
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