View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18263_high_18 (Length: 250)
Name: NF18263_high_18
Description: NF18263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18263_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 34501452 - 34501305
Alignment:
| Q |
17 |
agatagtaaaatatattttgcttatatatattaagacaagcaagagtcattgtaaataggtttggtcttaagttgacctataaattgcaaaattggattg |
116 |
Q |
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| T |
34501452 |
agatagtaaaatatattttgcttatatatattaagacaagcaagagtcatcgtaaataggt-----cttaagttgacctataaattgcaaaattggattg |
34501358 |
T |
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| Q |
117 |
aacttgcagcttgggttagagtctactagcatacacttacccaccaattatga |
169 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34501357 |
aacttgcagcttgggttagagtctactagcatacacttacccaccaattatga |
34501305 |
T |
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