View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18263_high_19 (Length: 247)
Name: NF18263_high_19
Description: NF18263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18263_high_19 |
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Alignment Details
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 1906462 - 1906223
Alignment:
| Q |
1 |
aatgaagtggtcaggtttcaatccaacatatcaccatacacaagcaagtgaatctaacatgagcttttcaggagctcctaatgcagtggtagcagtcaac |
100 |
Q |
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| T |
1906462 |
aatgaagtggtcaggtttcaatccaacatatcaccatacacaagcaagtgaatctaacatgagcttttcaggagctcctaatgcagtggtagcagtcaac |
1906363 |
T |
|
| Q |
101 |
tgagttgtttcttccattccaattccagtggtagattttgaaggggaattttggactcaagacctcttcattagtgagtaggaatatattataaagcata |
200 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
1906362 |
tgagttgtttcttccattacaattccagtggtagattttgaaggggaattttggactcaagacctcttcattagtaagtaggaatatattataaagcata |
1906263 |
T |
|
| Q |
201 |
gtatagagcatttgcaattcattgccctttaggtcctatg |
240 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
1906262 |
gtatagagcatttgcaattcattgccctttaggtcctatg |
1906223 |
T |
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