View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18263_high_21 (Length: 238)
Name: NF18263_high_21
Description: NF18263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18263_high_21 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 3982339 - 3982559
Alignment:
| Q |
18 |
ctaaagaggtttcaatcttcaatactcagttcaattagttttcatgcaataatggaatcataatcttctcgttctctttttcaatttacttcatcgtttg |
117 |
Q |
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| T |
3982339 |
ctaaggaggtttcaatcttcaatactcagttcaattagttttcatgcaataatggaatcataatcttctcgttctctttttcaatttacttcatcgtttg |
3982438 |
T |
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| Q |
118 |
cttttcagatcaatttgattcttgtagttgattttgatcgaaatgaaattaacacaaattccaggattaaactgtgcttttaattattcttatcaattca |
217 |
Q |
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| T |
3982439 |
cttttcagatcaatttgattcttgtagttgattttgatcgaaatgaaattcacacaaattccaggattaaactgtgcttttaattattcttatcaattca |
3982538 |
T |
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| Q |
218 |
tacgttgtaggaatttcaatc |
238 |
Q |
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| T |
3982539 |
tacgttgtaggaatttcaatc |
3982559 |
T |
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