View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18264_low_7 (Length: 320)
Name: NF18264_low_7
Description: NF18264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18264_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 44661911 - 44661605
Alignment:
| Q |
1 |
ataacttatagtctcaaaatcaaactaaacccacatcacaaacaccctaatccatagtgcccatgttttctttgaaatacggaaacctaaagcttccttg |
100 |
Q |
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||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44661911 |
ataacttatagtctcaaaatcgaactaaaccaacatcataaacaccctaatccatagtgcccatgttttctttgaaatacggaaacctaaagcttccttg |
44661812 |
T |
|
| Q |
101 |
aaatggcgagacttttgcatcgcaaaaacttgggaagcaaacaattcgttatgtatagcattgttgtagactataataatattaagaatattgagaagac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44661811 |
aaatggcgagacttttgcatcgcaaaaacttgggaagcaaacaattcgttatgtatagcattgttgtagactataataatattaagaatattgagaagac |
44661712 |
T |
|
| Q |
201 |
aaggaaggtggtgctattatgcggttaagaatccgattggattgcgaatgctctt--aaaacaaaagagtcataaaacaatattcataacttattacttg |
298 |
Q |
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|||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||| |
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| T |
44661711 |
aagggaggtggtgctattatgcgattaagaatccgattggattgcgaatgctcttaaaaaaaaaaaaaatcataaaacaatattcataacttattacttg |
44661612 |
T |
|
| Q |
299 |
tatagat |
305 |
Q |
| |
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||||||| |
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| T |
44661611 |
tatagat |
44661605 |
T |
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