View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18265_low_1 (Length: 290)

Name: NF18265_low_1
Description: NF18265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18265_low_1
NF18265_low_1
[»] chr6 (76 HSPs)
chr6 (1-275)||(25579773-25580044)
chr6 (1-275)||(26142919-26143190)
chr6 (1-274)||(26055981-26056251)
chr6 (1-274)||(26075951-26076221)
chr6 (1-272)||(25538597-25538865)
chr6 (1-275)||(25481796-25482067)
chr6 (90-275)||(26048899-26049081)
chr6 (90-275)||(26070068-26070250)
chr6 (3-275)||(27337929-27338198)
chr6 (3-275)||(27398669-27398938)
chr6 (1-276)||(26656042-26656314)
chr6 (1-276)||(26762013-26762285)
chr6 (4-275)||(26646533-26646801)
chr6 (4-275)||(26752501-26752769)
chr6 (2-275)||(26823894-26824164)
chr6 (141-276)||(27427605-27427740)
chr6 (109-275)||(26623030-26623193)
chr6 (109-275)||(26729008-26729171)
chr6 (141-275)||(27679000-27679134)
chr6 (183-272)||(26884220-26884311)
chr6 (141-275)||(27677613-27677747)
chr6 (183-275)||(27698535-27698627)
chr6 (183-275)||(27706443-27706535)
chr6 (178-275)||(27531233-27531330)
chr6 (183-275)||(27611043-27611135)
chr6 (183-275)||(27718420-27718512)
chr6 (214-274)||(27229287-27229347)
chr6 (183-275)||(27593061-27593153)
chr6 (183-275)||(27724886-27724978)
chr6 (172-276)||(28149990-28150094)
chr6 (197-275)||(31284342-31284420)
chr6 (10-248)||(26848741-26848976)
chr6 (1-248)||(27214498-27214745)
chr6 (1-248)||(27234483-27234730)
chr6 (127-249)||(28139621-28139743)
chr6 (139-276)||(27604702-27604839)
chr6 (144-245)||(28242888-28242989)
chr6 (182-249)||(26341974-26342041)
chr6 (189-275)||(28181168-28181254)
chr6 (189-275)||(28297760-28297846)
chr6 (189-275)||(28514227-28514313)
chr6 (184-249)||(26937174-26937239)
chr6 (200-248)||(2184369-2184417)
chr6 (199-247)||(26975134-26975182)
chr6 (180-247)||(25071741-25071808)
chr6 (195-257)||(26861688-26861750)
chr6 (189-275)||(28185420-28185506)
chr6 (1-67)||(28781398-28781464)
chr6 (1-67)||(28786537-28786603)
chr6 (1-67)||(28792658-28792724)
chr6 (7-116)||(25506852-25506961)
chr6 (183-247)||(2184980-2185044)
chr6 (189-245)||(28227034-28227090)
chr6 (10-97)||(26959395-26959482)
chr6 (69-248)||(28098299-28098475)
chr6 (1-81)||(26617867-26617947)
chr6 (1-81)||(26723795-26723875)
chr6 (197-245)||(26949745-26949793)
chr6 (201-245)||(28234648-28234692)
chr6 (184-275)||(28781193-28781284)
chr6 (194-248)||(27665169-27665223)
chr6 (183-272)||(26802499-26802588)
chr6 (194-275)||(28325535-28325616)
chr6 (3-43)||(28098221-28098261)
chr6 (25-85)||(28234804-28234864)
chr6 (194-245)||(26635774-26635825)
chr6 (10-97)||(26635919-26636006)
chr6 (194-245)||(26741740-26741791)
chr6 (10-97)||(26741885-26741972)
chr6 (10-81)||(26811754-26811825)
chr6 (10-101)||(26975277-26975368)
chr6 (184-231)||(28786376-28786423)
chr6 (184-231)||(28792497-28792544)
chr6 (199-245)||(26959250-26959296)
chr6 (10-87)||(28297584-28297661)
chr6 (10-87)||(28514412-28514489)
[»] chr4 (8 HSPs)
chr4 (1-275)||(18655326-18655597)
chr4 (1-249)||(18731353-18731598)
chr4 (1-249)||(18699249-18699494)
chr4 (1-249)||(18723934-18724179)
chr4 (1-249)||(18679416-18679661)
chr4 (141-276)||(18073815-18073950)
chr4 (190-276)||(17989088-17989174)
chr4 (139-247)||(5090951-5091059)
[»] chr1 (3 HSPs)
chr1 (1-275)||(268206-268477)
chr1 (1-272)||(28127528-28127796)
chr1 (1-249)||(28164212-28164456)
[»] chr8 (1 HSPs)
chr8 (1-272)||(29273632-29273900)
[»] scaffold0003 (1 HSPs)
scaffold0003 (141-276)||(59623-59758)
[»] scaffold0349 (2 HSPs)
scaffold0349 (183-275)||(3462-3555)
scaffold0349 (183-275)||(14397-14488)
[»] scaffold0277 (3 HSPs)
scaffold0277 (1-275)||(4533-4804)
scaffold0277 (1-62)||(13494-13555)
scaffold0277 (184-231)||(13674-13721)
[»] scaffold0419 (2 HSPs)
scaffold0419 (1-62)||(7789-7850)
scaffold0419 (186-231)||(7623-7668)
[»] scaffold0038 (5 HSPs)
scaffold0038 (144-245)||(43050-43151)
scaffold0038 (189-245)||(34809-34865)
scaffold0038 (189-245)||(27532-27588)
scaffold0038 (194-275)||(116850-116931)
scaffold0038 (25-85)||(34966-35026)
[»] scaffold0019 (1 HSPs)
scaffold0019 (194-275)||(58334-58415)
[»] chr2 (3 HSPs)
chr2 (194-247)||(17993736-17993789)
chr2 (194-249)||(3279768-3279823)
chr2 (3-43)||(3279986-3280026)


Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 25580044 - 25579773
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||    
T  25580044 tagccggacaagttagcagcttgggtaagagctatcttccattgacgcaatcgctccatgtttttctcgttattttgaaacctctcttcatgcttagtaa 25579945  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    ||| |||||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25579944 gatactcaccataactcccactctgatg---tcgtatgtgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtcttgtagcagtg 25579848  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25579847 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 25579773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 26143190 - 26142919
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||    
T  26143190 tagccggacaagttagcagcttggataagagctatcttccattgacgcaatcgctccatgtttttctcgttattttgaaacctctcttcatgcttagtaa 26143091  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||||||||||||| ||||||| ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26143090 gatgctcaccataaatcccactctgat---ttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 26142994  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26142993 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 26142919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 26056251 - 26055981
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||    
T  26056251 tagccggacaagttagcagcttgagtaagagccatcttccattgacgcaatcgctccatgtttttctcgttattttggaacccctctttatgcttagtaa 26056152  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||||||||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  26056151 gatgctcaccataactcccactctgatg---tcgtatgtgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtgttgtagcagtg 26056055  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcc 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26056054 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcc 26055981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 26076221 - 26075951
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||    
T  26076221 tagccggacaagttagcagcttgagtaagagccatcttccattgacgcaatcgctccatgtttttctcgttattttggaacccctctttatgcttagtaa 26076122  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||||||||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  26076121 gatgctcaccataactcccactctgatg---tcgtatgtgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtgttgtagcagtg 26076025  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcc 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26076024 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcc 26075951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 25538865 - 25538597
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||| |||||||||||    
T  25538865 tagccggacaagttagcagcttggataagagctatcttccattgacgcaatcgctccatgtttttctcattattttgaaacctctcttcatgcttagtaa 25538766  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
     ||||||||||||||||||||| |||||   |||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25538765 aatgctcaccataactcccactctgatg---tcgtaactgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtcttgtagcagtg 25538669  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaat 272  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25538668 aatgatctggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaat 25538597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 25482067 - 25481796
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||| |    
T  25482067 tagccggacaaattagcagcttgagtaagagccatcttccattgacgcaatcgctccatgtttttctcgttattttggaacccctcttcatgcttagtca 25481968  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||  |||||||||||   || |  ||||  ||| |  | |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  25481967 gatattcaccataact---acatgtatgacgtcgaacatcagtaggatccacaccatagaaaacgggtaatactaagcaactctttgtcttgtagcagtg 25481871  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25481870 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaatacaaatcct 25481796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 90 - 275
Target Start/End: Complemental strand, 26049081 - 26048899
Alignment:
Q  90 atgcttagtaagatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtc 189  Q
    ||||||||||||||||||||||||||| ||||| |||||   ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  26049081 atgcttagtaagatgctcaccataacttccactatgatg---tcgtatgtgagtaggttccacatcataaaaaacgggcaatactaagcaactctttgtc 26048985  T
Q  190 ttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26048984 ttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 26048899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 90 - 275
Target Start/End: Complemental strand, 26070250 - 26070068
Alignment:
Q  90 atgcttagtaagatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtc 189  Q
    ||||||||||||||||||||||||||| ||||| |||||   ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  26070250 atgcttagtaagatgctcaccataacttccactatgatg---tcgtatgtgagtaggttccacatcataaaaaacgggcaatactaagcaactctttgtc 26070154  T
Q  190 ttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26070153 ttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 26070068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 3 - 275
Target Start/End: Original strand, 27337929 - 27338198
Alignment:
Q  3 gccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaaga 102  Q
    |||||| ||||||||||||||||||||||||||||||||||    ||| | |||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  27337929 gccggagaagttagcagcttgggtaagagccatcttccatttcttcaacctctccatgttttccttgttattttggaacttatcttcatgcttagtaaga 27338028  T
Q  103 tgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaa 202  Q
    |||||||||||||||||| | |||||   ||||| ||||||||| ||| || |||||||||| || || ||  | |||| | ||||||||||||||||||    
T  27338029 tgctcaccataactcccagtctgatg---tcgtacgtgagtaggatccgcaccatagaaaacaggcaaaaccgaacaaccccttgtcttgtagcagtgaa 27338125  T
Q  203 tgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  27338126 tgatgtggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcct 27338198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 3 - 275
Target Start/End: Original strand, 27398669 - 27398938
Alignment:
Q  3 gccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaaga 102  Q
    |||||| ||||||||||||||||||||||||||||||||||    ||| | |||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  27398669 gccggagaagttagcagcttgggtaagagccatcttccatttcttcaacctctccatgttttccttgttattttggaacttatcttcatgcttagtaaga 27398768  T
Q  103 tgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaa 202  Q
    |||||||||||||||||| | |||||   ||||| ||||||||| ||| || |||||||||| || || ||  | |||| | ||||||||||||||||||    
T  27398769 tgctcaccataactcccagtctgatg---tcgtacgtgagtaggatccgcaccatagaaaacaggcaaaaccgaacaaccccttgtcttgtagcagtgaa 27398865  T
Q  203 tgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  27398866 tgatgtggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcct 27398938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 26656314 - 26656042
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    ||||| |||||||| ||||||| ||| |||||||||||||||||   ||| | || ||||||||||| ||||||||||||||||| || |||||||||||    
T  26656314 tagccagacaagttggcagctttggtcagagccatcttccattgctccaacctctgcatgttttccttgttattttggaacttcttttcatgcttagtaa 26656215  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||||||||| ||||| ||| | |||||   ||||||||||||||| |||||| |||||||||| || || ||  | |||| ||||||||| ||||| ||    
T  26656214 gatgctcaccgtaacttccagtctgatg---tcgtatgtgagtaggatccacaccatagaaaacaggcaaaaccgaacaaccctttgtcttatagcaatg 26656118  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26656117 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctg 26656042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 26762285 - 26762013
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    ||||| |||||||| ||||||| ||| |||||||||||||||||   ||| | || ||||||||||| ||||||||||||||||| || |||||||||||    
T  26762285 tagccagacaagttggcagctttggtcagagccatcttccattgctccaacctctgcatgttttccttgttattttggaacttcttttcatgcttagtaa 26762186  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||||||||| ||||| ||| | |||||   ||||||||||||||| |||||| |||||||||| || || ||  | |||| ||||||||| ||||| ||    
T  26762185 gatgctcaccgtaacttccagtctgatg---tcgtatgtgagtaggatccacaccatagaaaacaggcaaaaccgaacaaccctttgtcttatagcaatg 26762089  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26762088 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctg 26762013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 275
Target Start/End: Complemental strand, 26646801 - 26646533
Alignment:
Q  4 ccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaagat 103  Q
    ||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||| |||||| || ||||||||||||  ||||||  |||||||| ||||    
T  26646801 ccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgttccttgtttttcttgttattttggaaactctcttcgtgcttagtgagat 26646702  T
Q  104 gctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaat 203  Q
    | |||||||||||||||||||||||    ||||| |||||||| |||||  ||||||||||||| || || |  | || ||||||||||||||| |||||    
T  26646701 gttcaccataactcccactttgatg---ccgtatctgagtaggatccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatgaat 26646605  T
Q  204 gatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||  |||||| |  ||||||||||||||    
T  26646604 gatgtggacaagttcgtccaaacaaaatttagaagaggcatagttgatagaaaacacaggaataaaaatcct 26646533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 275
Target Start/End: Complemental strand, 26752769 - 26752501
Alignment:
Q  4 ccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaagat 103  Q
    ||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||| |||||| || ||||||||||||  ||||||  |||||||| ||||    
T  26752769 ccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgttccttgtttttcttgttattttggaaactctcttcgtgcttagtgagat 26752670  T
Q  104 gctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaat 203  Q
    | |||||||||||||||||||||||    ||||| |||||||| |||||  ||||||||||||| || || |  | || ||||||||||||||| |||||    
T  26752669 gttcaccataactcccactttgatg---ccgtatctgagtaggatccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatgaat 26752573  T
Q  204 gatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||  |||||| |  ||||||||||||||    
T  26752572 gatgtggacaagttcgtccaaacaaaatttagaagaggcatagttgatagaaaacacaggaataaaaatcct 26752501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 275
Target Start/End: Complemental strand, 26824164 - 26823894
Alignment:
Q  2 agccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaag 101  Q
    |||| ||||||| |||||||||  | |||||| ||||||||||| |||||  |||||||||||||| |||||||  |||| ||| || ||||||||| ||    
T  26824164 agccagacaagtcagcagcttgtttcagagccttcttccattgaagcaatttctccatgttttccttgttatttccgaacctcttttcatgcttagtgag 26824065  T
Q  102 atgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtga 201  Q
    |||   | ||||||||||||  |||||   |||||||| |  ||| |||||| |||||||||| || || || | ||  | ||||  |||||||  | ||    
T  26824064 atgtatagcataactcccacgctgatg---tcgtatgtcaccaggatccacaccatagaaaacaggcaaaacgaggcgccccttttccttgtagacgcga 26823968  T
Q  202 atgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||    
T  26823967 atgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttggcagaaaacacaggaataaaaatcct 26823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 141 - 276
Target Start/End: Original strand, 27427605 - 27427740
Alignment:
Q  141 agtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagat 240  Q
    ||||||||||||| || ||||||| || || || | ||||| ||| || |||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  27427605 agtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagat 27427704  T
Q  241 gcatagttggcagaaaatatgggaataaaaatcctg 276  Q
    |||||||||||||||||||||||||| |||||||||    
T  27427705 gcatagttggcagaaaatatgggaatcaaaatcctg 27427740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 275
Target Start/End: Complemental strand, 26623193 - 26623030
Alignment:
Q  109 ccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgt 208  Q
    |||||||||||| |||||||    |||||||||||||| |||||  ||||||| ||||| || || |  | || |||||| |||||||||||||||||||    
T  26623193 ccataactcccagtttgatgc---cgtatgtgagtaggatccacgccatagaagacgggcaaaacgagacgaccctttgttttgtagcagtgaatgatgt 26623097  T
Q  209 ggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||| |||||||||||||||||| |||||||||||| |||||| |  ||||||||||||||    
T  26623096 ggacaagttcatccaaacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcct 26623030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 275
Target Start/End: Complemental strand, 26729171 - 26729008
Alignment:
Q  109 ccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgt 208  Q
    |||||||||||| |||||||    |||||||||||||| |||||  ||||||| ||||| || || |  | || |||||| |||||||||||||||||||    
T  26729171 ccataactcccagtttgatgc---cgtatgtgagtaggatccacgccatagaagacgggcaaaacgagacgaccctttgttttgtagcagtgaatgatgt 26729075  T
Q  209 ggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||| |||||||||||||||||| |||||||||||| |||||| |  ||||||||||||||    
T  26729074 ggacaagttcatccaaacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcct 26729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 275
Target Start/End: Complemental strand, 27679134 - 27679000
Alignment:
Q  141 agtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagat 240  Q
    ||||||||||||| || ||||||| || |  || | || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27679134 agtaggttccacaccaaagaaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagag 27679035  T
Q  241 gcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||  |||||| |  ||||||||||||||    
T  27679034 gcatagttgatagaaaacacaggaataaaaatcct 27679000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 26884311 - 26884220
Alignment:
Q  183 ctttgtcttgtagcagtgaatga--tgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaat 272  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  26884311 ctttgtctcgtagcagtgaatgacatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaat 26884220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 141 - 275
Target Start/End: Original strand, 27677613 - 27677747
Alignment:
Q  141 agtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagat 240  Q
    ||||||||||||| || ||||||| || |  || | || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27677613 agtaggttccacagcaaagaaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagag 27677712  T
Q  241 gcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||  |||||| |  | ||||||||||||    
T  27677713 gcatagttgatagaaaacacagcaataaaaatcct 27677747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 27698535 - 27698627
Alignment:
Q  183 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||| |  ||||||||||||||    
T  27698535 ctttgtctcgtagcagtgaattatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttgagagaaaacacaggaataaaaatcct 27698627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 27706443 - 27706535
Alignment:
Q  183 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||  |||||| |  ||||||||||||||    
T  27706443 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcataggtgatagaaaacacaggaataaaaatcct 27706535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 27531233 - 27531330
Alignment:
Q  178 caactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||| |||||| | |||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  27531233 caaccctttgtatcgtagcaatgagtgatgtgaacaagttcgtccaaacaaaatgaagaagatgcatagttttcagaaaatacgggaataaaaatcct 27531330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 27611043 - 27611135
Alignment:
Q  183 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||  |||||| |  ||||||||||||||    
T  27611043 ctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcct 27611135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 27718420 - 27718512
Alignment:
Q  183 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||  |||||| |  ||||||||||||||    
T  27718420 ctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcct 27718512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 27229347 - 27229287
Alignment:
Q  214 agttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcc 274  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27229347 agttcgttcaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcc 27229287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 27593061 - 27593153
Alignment:
Q  183 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||| |||||||||  |||||| |  ||||||||||||||    
T  27593061 ctttgtcttgtagcaatgaatgatgtggtcaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcct 27593153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 27724886 - 27724978
Alignment:
Q  183 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | |||||||||  |||||| |  ||||||||||||||    
T  27724886 ctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaataggcatagttgatagaaaacacaggaataaaaatcct 27724978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 28150094 - 28149990
Alignment:
Q  172 actaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaa 271  Q
    |||||||||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||  ||| || || ||||| ||||    
T  28150094 actaagcaaccctttgccttgaagcagtgaataatgtggacaagttcgtccaaacaaaatgaagaagaagtatagttgatagagaagattggaatgaaaa 28149995  T
Q  272 tcctg 276  Q
    |||||    
T  28149994 tcctg 28149990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 275
Target Start/End: Complemental strand, 31284420 - 31284342
Alignment:
Q  197 agtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| | ||| |||||||||||    
T  31284420 agtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcct 31284342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 248
Target Start/End: Complemental strand, 26848976 - 26848741
Alignment:
Q  10 aagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaagatgct-ca 108  Q
    ||||||||||| ||| |||||||  ||||||||| |||||| ||||||||| |||||| ||||||||| |||  ||||| |||||||| ||| |||| ||    
T  26848976 aagttagcagcatggttaagagctttcttccatttacgcaaacgctccatgctttccttgttattttgaaacacctcttcatgcttagcaag-tgcttca 26848878  T
Q  109 ccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgt 208  Q
    |||||||| | | | |||||   ||| |  |||| |||||| |   |||||||||| ||||  || | || || ||||  |||| |||| ||||||||||    
T  26848877 ccataactactattctgatg---tcgcacatgagaaggttctatgccatagaaaacaggaataaccatgctacccttttccttggagcaatgaatgatgt 26848781  T
Q  209 ggacaagttcgtccaaacaaaatgaagaagatgcatagtt 248  Q
    |||||||||||||||||||||| |||||||  ||||||||    
T  26848780 ggacaagttcgtccaaacaaaacgaagaagtggcatagtt 26848741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 27214745 - 27214498
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    ||||| || ||||||||||||||| ||||||| ||||||||||   |||| |||||||||||||||| ||||||||| ||| |||||| |||||||| ||    
T  27214745 tagccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctcttcatgcttagcaa 27214646  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |    |||||||||||     | |   ||| ||| | ||||| |||||| ||  |||||||||| || |  || | || ||  |||  |||| |||| ||    
T  27214645 gcgcttcaccataactgttgttgttcagatgtcgcaagtgagaaggttcaacgccatagaaaacaggtagaacaaggcgacctttttccttggagcaatg 27214546  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagtt 248  Q
    | ||||||||||||||||||||||||||||||||||||  ||||||||    
T  27214545 agtgatgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27214498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 27234483 - 27234730
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    ||||| || ||||||||||||||| ||||||| ||||||||||   |||| |||||||||||||||| ||||||||| ||| |||||| |||||||| ||    
T  27234483 tagccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctcttcatgcttagcaa 27234582  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |    |||||||||||     | |   ||| ||| | ||||| |||||| ||  |||||||||| || |  || | || ||  |||  |||| |||| ||    
T  27234583 gcgcttcaccataactgttgttgttcagatgtcgcaagtgagaaggttcaacgccatagaaaacaggtagaacaaggcgacctttttccttggagcaatg 27234682  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagtt 248  Q
    | ||||||||||||||||||||||||||||||||||||  ||||||||    
T  27234683 agtgatgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27234730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 249
Target Start/End: Complemental strand, 28139743 - 28139621
Alignment:
Q  127 tgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaac 226  Q
    |||| ||| ||||||| ||| |||||| |||||||||| || || || || || | |||||| ||| |||||| |||||||||||||||||||||||| |    
T  28139743 tgatgtcgaatgtgagaaggatccacaccatagaaaacaggcaaaaccaaacatccctttgtgttgaagcagtcaatgatgtggacaagttcgtccaagc 28139644  T
Q  227 aaaatgaagaagatgcatagttg 249  Q
    |||| |||||||| |||||||||    
T  28139643 aaaacgaagaagaggcatagttg 28139621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 276
Target Start/End: Original strand, 27604702 - 27604839
Alignment:
Q  139 tgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaag 238  Q
    |||| |||||||||| || ||||||| || || || | || || ||||||| ||||||| ||||||||||| |||||||| ||||||||||| |||||||    
T  27604702 tgagaaggttccacaccaaagaaaacaggcaaaacgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaaggaagaag 27604801  T
Q  239 atgcatagttggcagaaaatatgggaataaaaatcctg 276  Q
    | ||||| |||  |||||| |  |||||||||||||||    
T  27604802 aggcatatttgatagaaaacacaggaataaaaatcctg 27604839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 28242989 - 28242888
Alignment:
Q  144 aggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgca 243  Q
    ||||||||||||||||||||  || || |||| ||  |  ||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  28242989 aggttccacatcatagaaaattggcaaaactaggcgtccatttttcttgcagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagca 28242890  T
Q  244 ta 245  Q
    ||    
T  28242889 ta 28242888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 26341974 - 26342041
Alignment:
Q  182 tctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 249  Q
    |||||| |||| |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  26341974 tctttgccttgaagcaatgaatgatgtggacaagttcgtccaaacaaaacgaagaagaagcatagttg 26342041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 28181254 - 28181168
Alignment:
Q  189 cttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||  ||| || | |||||| ||||||||    
T  28181254 cttgaagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcct 28181168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 28297760 - 28297846
Alignment:
Q  189 cttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||| || |  ||||| ||||||||    
T  28297760 cttgaagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcct 28297846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 28514313 - 28514227
Alignment:
Q  189 cttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||| || |  ||||| ||||||||    
T  28514313 cttgaagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcct 28514227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 26937239 - 26937174
Alignment:
Q  184 tttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 249  Q
    ||||||||| |||||| || |||||||||||||||||||||||||||||||||||  |||||||||    
T  26937239 tttgtcttgaagcagtcaacgatgtggacaagttcgtccaaacaaaatgaagaagtggcatagttg 26937174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 2184417 - 2184369
Alignment:
Q  200 gaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagtt 248  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2184417 gaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagtt 2184369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 26975182 - 26975134
Alignment:
Q  199 tgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagt 247  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26975182 tgaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagt 26975134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 25071808 - 25071741
Alignment:
Q  180 actctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagt 247  Q
    |||||||  |||| || ||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  25071808 actcttttccttgaagtagtgaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 25071741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 26861750 - 26861688
Alignment:
Q  195 gcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaa 257  Q
    ||||| |||||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||    
T  26861750 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaa 26861688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 28185506 - 28185420
Alignment:
Q  189 cttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||| |||  ||| || | |||||| ||||||||    
T  28185506 cttgaagcagttaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcct 28185420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28781464 - 28781398
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcct 67  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||| | ||||||||| ||||    
T  28781464 tagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatcct 28781398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28786603 - 28786537
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcct 67  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||| | ||||||||| ||||    
T  28786603 tagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatcct 28786537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28792724 - 28792658
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcct 67  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||| | ||||||||| ||||    
T  28792724 tagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatcct 28792658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 25506852 - 25506961
Alignment:
Q  7 gacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaagatgct 106  Q
    |||| |||||||| ||| || ||||| || ||||||||| || ||| ||||||||||| ||  |||||||| |||||||||| ||||||||| ||||  |    
T  25506852 gacaggttagcagattgtgttagagctattttccattgatgcgatctctccatgtttttcttattattttgaaacttctcttcatgcttagtcagatctt 25506951  T
Q  107 caccataact 116  Q
    ||||||||||    
T  25506952 caccataact 25506961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 2185044 - 2184980
Alignment:
Q  183 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagt 247  Q
    ||||| |||| ||||  ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  2185044 ctttgacttggagcaacgaatgatatggacaagttcgtccaaacaaaatgaagaagaagcatagt 2184980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 28227090 - 28227034
Alignment:
Q  189 cttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcata 245  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||||||| |||||    
T  28227090 cttgaagcaatgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcata 28227034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 26959482 - 26959395
Alignment:
Q  10 aagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttag 97  Q
    ||||||||||||||| |||||||  |||||||||   |||| |||||||||||||||| | ||||||| |||| ||||| ||||||||    
T  26959482 aagttagcagcttggttaagagctttcttccatttcagcaaccgctccatgttttccttgctattttgaaactgctcttcatgcttag 26959395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 248
Target Start/End: Original strand, 28098299 - 28098475
Alignment:
Q  69 gttattttggaacttctcttgatgcttagtaagatgct-caccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacggg 167  Q
    ||||||||||||| |||||| ||||||||  | ||||| |||||||||||||  | |||||   ||| | ||||| ||||||||| ||| | ||||  ||    
T  28098299 gttattttggaacctctcttcatgcttagcta-atgcttcaccataactccccgtctgatg---tcgcacgtgagaaggttccacgtcacaaaaaatagg 28098394  T
Q  168 aaatactaagcaactctttgtctt-gtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagtt 248  Q
    ||| || ||||||| |||| |||| ||| | ||||||||||||||||||||| |||||||||||  ||||||| ||||||||    
T  28098395 aaaaacgaagcaacccttt-tcttcgtaacggtgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcatagtt 28098475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26617947 - 26617867
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaac 81  Q
    ||||| || ||||||  ||||||| ||||||| ||||||||||   |||| |||||||||||||||| |||||||||||||    
T  26617947 tagccagataagttataagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttggaac 26617867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26723875 - 26723795
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaac 81  Q
    ||||| || ||||||  ||||||| ||||||| ||||||||||   |||| |||||||||||||||| |||||||||||||    
T  26723875 tagccagataagttataagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttggaac 26723795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 26949793 - 26949745
Alignment:
Q  197 agtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcata 245  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||||    
T  26949793 agtgaatgatatggacaagttcgtctaaacaaaatgaagaagaagcata 26949745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 28234692 - 28234648
Alignment:
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcata 245  Q
    |||||||||||||||||||||||| |||||||||||||| |||||    
T  28234692 aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcata 28234648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 28781284 - 28781193
Alignment:
Q  184 tttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||   ||||  |||||||||  |||||| |  ||||||||||||||    
T  28781284 tttgtcttgtagcaatgaataatgtgaacaagttcgtccaagcaaaattttgaagtggcatagttgatagaaaacacaggaataaaaatcct 28781193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 27665169 - 27665223
Alignment:
Q  194 agcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagtt 248  Q
    |||| |||||||||||||||||||| || ||||||||||||||||  ||||||||    
T  27665169 agcaatgaatgatgtggacaagttcatctaaacaaaatgaagaagtagcatagtt 27665223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 26802588 - 26802499
Alignment:
Q  183 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaat 272  Q
    ||||||||| ||||| ||||| ||||| |||||||||||||| ||||||   ||||| |||||||||  |||||| |  |||||||||||    
T  26802588 ctttgtcttatagcaatgaataatgtgaacaagttcgtccaagcaaaattttgaagaggcatagttgatagaaaacacaggaataaaaat 26802499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 28325616 - 28325535
Alignment:
Q  194 agcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||| |||||||||||||| ||||| ||||| |||||||| ||||| |||  ||| || || ||||| ||||||||    
T  28325616 agcagtgaataatgtggacaagttcatccaagcaaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcct 28325535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 28098221 - 28098261
Alignment:
Q  3 gccggacaagttagcagcttgggtaagagccatcttccatt 43  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  28098221 gccggacaagttagctgcttggttaagagccatcttccatt 28098261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 28234864 - 28234804
Alignment:
Q  25 gtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttct 85  Q
    |||||||||||||||||||   |||| | ||||||||| |||| |||||||||||||||||    
T  28234864 gtaagagccatcttccatttctgcaacctctccatgttatccttgttattttggaacttct 28234804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 26635825 - 26635774
Alignment:
Q  194 agcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcata 245  Q
    |||| |||||||||||||||||||| |||||||||||  ||||||| |||||    
T  26635825 agcaatgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcata 26635774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 26636006 - 26635919
Alignment:
Q  10 aagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttag 97  Q
    ||||||||||||||| |||||||  |||||||||   |||| | |||||||||||||| | ||||||| ||||  |||| ||||||||    
T  26636006 aagttagcagcttggttaagagctttcttccatttcagcaaccactccatgttttccttgctattttgaaactgatcttcatgcttag 26635919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 26741791 - 26741740
Alignment:
Q  194 agcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcata 245  Q
    |||| |||||||||||||||||||| |||||||||||  ||||||| |||||    
T  26741791 agcaatgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcata 26741740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 26741972 - 26741885
Alignment:
Q  10 aagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttag 97  Q
    ||||||||||||||| |||||||  |||||||||   |||| | |||||||||||||| | ||||||| ||||  |||| ||||||||    
T  26741972 aagttagcagcttggttaagagctttcttccatttcagcaaccactccatgttttccttgctattttgaaactgatcttcatgcttag 26741885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 26811825 - 26811754
Alignment:
Q  10 aagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaac 81  Q
    |||||| || ||||| ||||||| ||||||||||   |||| || ||||||||||||| |||||||||||||    
T  26811825 aagttaccaacttggttaagagctatcttccatttctgcaaccgatccatgttttccttgttattttggaac 26811754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 26975368 - 26975277
Alignment:
Q  10 aagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaag 101  Q
    ||||||||||||||| |||||||  ||||||||| | |||| ||||||| |||||| |  |||||||| |||  ||||| |||||||| |||    
T  26975368 aagttagcagcttggttaagagctttcttccatttaagcaaccgctccaagttttcatttttattttgaaacccctcttcatgcttagcaag 26975277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 28786423 - 28786376
Alignment:
Q  184 tttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaat 231  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||    
T  28786423 tttgtcttgtagcaatgaataatgtgaacaagttcgtccaagcaaaat 28786376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 28792544 - 28792497
Alignment:
Q  184 tttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaat 231  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||    
T  28792544 tttgtcttgtagcaatgaataatgtgaacaagttcgtccaagcaaaat 28792497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 26959296 - 26959250
Alignment:
Q  199 tgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcata 245  Q
    |||||||||||||||||||| |||||| |||| |||||||| |||||    
T  26959296 tgaatgatgtggacaagttcatccaaataaaacgaagaagaagcata 26959250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 28297584 - 28297661
Alignment:
Q  10 aagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctct 87  Q
    |||||||||| ||| ||||||||  |||||||||   |||| | ||||||||| | || |||||||||||||||||||    
T  28297584 aagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgttattcttgttattttggaacttctct 28297661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 28514489 - 28514412
Alignment:
Q  10 aagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctct 87  Q
    |||||||||| ||| ||||||||  |||||||||   |||| | ||||||||| | || |||||||||||||||||||    
T  28514489 aagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgttattcttgttattttggaacttctct 28514412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 18655326 - 18655597
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||| |||| ||||||||||||| || |||||||||||| |||| |   |||||||| |    
T  18655326 tagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtttttcttgttattttggaaattctttctgtgcttagtga 18655425  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||| ||||||||||| ||| |||||||   ||||||||||||||| |||||  |||||||||| ||||| || |  | || ||||||||||||||||||    
T  18655426 gatgttcaccataacttccagtttgatg---tcgtatgtgagtaggatccacgccatagaaaacaggaaaaacgagacgaccctttgtcttgtagcagtg 18655522  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||  |||||| |  |||||||| |||||    
T  18655523 aatgatgcggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaagatcct 18655597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 18731353 - 18731598
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||| |||| ||||||||||||| || ||||||||||||  ||| ||  |||||||| |    
T  18731353 tagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttttgtgcttagtga 18731452  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||| |||||||||||||||||||||||   |||||||||| |||| |||||  |||||||||| || || || |  | || ||||||||||||||||||    
T  18731453 gatgttcaccataactcccactttgatg---tcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtg 18731549  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 249  Q
     |||||||||||||||||||||||||||||||||||||| |||||||||    
T  18731550 catgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttg 18731598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 18699249 - 18699494
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    |||||||||||||||||||||| ||| ||||| | |||||||||| |||| ||||||||||||| || ||||||||||||  ||| |   |||||||| |    
T  18699249 tagccggacaagttagcagcttcggtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttccgtgcttagtga 18699348  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||| |||||||||||||||||||||||   ||||||||||||||| || ||  |||||||||| || || || |  | ||  |||||||||||||||||    
T  18699349 gatgttcaccataactcccactttgatg---tcgtatgtgagtaggatctacgccatagaaaacaggcaaaacgagacgaccttttgtcttgtagcagtg 18699445  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 249  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  18699446 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttg 18699494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 18723934 - 18724179
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||| |||| ||||||||||||| || ||||||||||||  ||  ||  |||||||| |    
T  18723934 tagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactcattttgtgcttagtga 18724033  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||| |||||||||||||||||||| ||   |||||||||| |||| |||||  |||||||||| || || || |  | || ||||||||||||||||||    
T  18724034 gatgttcaccataactcccactttggtg---tcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtg 18724130  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 249  Q
     ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  18724131 catgatgtggacaagttcgttcaaacaaaatgaagaagaggcatagttg 18724179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 18679416 - 18679661
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    |||||||||||||||||||||| ||| ||||| | |||||||||| |||| |||||||||||||  | ||||||||||||  ||| |   || ||||| |    
T  18679416 tagccggacaagttagcagcttcggtcagagctaacttccattgatgcaaccgctccatgtttttattgttattttggaaactctttcagtgattagtga 18679515  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||| ||||||||||| |||||||||||   || |||||||||||| |||||  |||||||||| || || || |  | || ||||||||||||||||||    
T  18679516 gatgttcaccataactaccactttgatg---tcatatgtgagtaggatccacgacatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtg 18679612  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 249  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18679613 aatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttg 18679661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 141 - 276
Target Start/End: Complemental strand, 18073950 - 18073815
Alignment:
Q  141 agtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagat 240  Q
    ||||||||||||| || ||||||| || || || | ||||| ||| || |||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  18073950 agtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagat 18073851  T
Q  241 gcatagttggcagaaaatatgggaataaaaatcctg 276  Q
    |||||||||||||||||||||||||| |||||||||    
T  18073850 gcatagttggcagaaaatatgggaatcaaaatcctg 18073815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 17989088 - 17989174
Alignment:
Q  190 ttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctg 276  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  17989088 ttgtagcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctg 17989174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 5090951 - 5091059
Alignment:
Q  139 tgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaag 238  Q
    |||| |||||||||| |||||||||  || || || | |||||  |||  |||| |||||||||| || ||||||||||| || |||||||| |||||||    
T  5090951 tgagaaggttccacaccatagaaaataggcaaaaccaggcaaccattttccttggagcagtgaataatatggacaagttcatctaaacaaaacgaagaag 5091050  T
Q  239 atgcatagt 247  Q
    | |||||||    
T  5091051 aagcatagt 5091059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 268206 - 268477
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    ||||| |||||||||| ||||||||| ||||||| |||||||||| |||| ||||||||||||| || | ||||||||||  ||||||  |||||||| |    
T  268206 tagccagacaagttagaagcttgggtcagagccaacttccattgatgcaaccgctccatgtttttcttgctattttggaaactctcttcgtgcttagtga 268305  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||| |||||||||||||||||||||||   ||||||||||||||| |||||  ||||||| ||||| || |  |  | || |||| |||||||||||||    
T  268306 gatgttcaccataactcccactttgatg---tcgtatgtgagtaggatccacgccatagaagacgggcaaaatgagacgaccctttttcttgtagcagtg 268402  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  |||||| |  ||||||||||||||    
T  268403 aatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcct 268477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 28127528 - 28127796
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    |||||||||||||||||||||||||| ||||| |||||||||||  |||||||||||||||||| || ||||||||||||| |||||  |||||||| ||    
T  28127528 tagccggacaagttagcagcttgggttagagctatcttccattggtgcaatcgctccatgtttttcttgttattttggaacctctctccatgcttagcaa 28127627  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    | |  ||||||||||||||  |   ||||| ||| |  | |||||| |||||  || ||||||| || || |||| || || ||||||||||||||||||    
T  28127628 gctcttcaccataactccctgt---atgatatcgcacatcagtaggatccacgccaaagaaaacaggcaaaactaggcgaccctttgtcttgtagcagtg 28127724  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaat 272  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||    
T  28127725 aatgatgtgcacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaatacaggaataaaaat 28127796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 28164212 - 28164456
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    |||||||||||||||||||||||||| ||||| |||||||||||  |||||||||||||||||| || ||||||||||||| ||||   |||||||||||    
T  28164212 tagccggacaagttagcagcttgggttagagctatcttccattggtgcaatcgctccatgtttttcttgttattttggaacctctcaccatgcttagtaa 28164311  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||  |  |||||||||||  | |||||   ||| |  | |||||| |||||  || ||||||| || || |||| || || ||||||||||||||||||    
T  28164312 gatctttgccataactccctgtatgatg---tcgcacatcagtaggatccacgcca-agaaaacaggcaaaactaggcgaccctttgtcttgtagcagtg 28164407  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 249  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28164408 aatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttg 28164456  T

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Target: chr8 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 29273632 - 29273900
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    ||||| |||||||||| ||||||||| ||||||| |||||||||| |||| || |||||||||| || | ||||||||||  ||||||  | |||||| |    
T  29273632 tagccagacaagttagaagcttgggtcagagccaacttccattgatgcaaccgatccatgtttttcttgctattttggaaactctcttcgtacttagtga 29273731  T
Q  101 gatgctcaccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtg 200  Q
    |||| |||||||||||||||||||||||   ||||||||||||||| |||||  ||||||| || || || |  |  | || ||||||||||||||||||    
T  29273732 gatgttcaccataactcccactttgatg---tcgtatgtgagtaggatccacgccatagaagacaggcaaaatgagacgaccctttgtcttgtagcagtg 29273828  T
Q  201 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaat 272  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  |||||| |  |||||||||||    
T  29273829 aatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaat 29273900  T

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Target: scaffold0003 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 141 - 276
Target Start/End: Complemental strand, 59758 - 59623
Alignment:
Q  141 agtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagat 240  Q
    ||||||||||||| || ||||||| || || || | ||||| ||| || |||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  59758 agtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagat 59659  T
Q  241 gcatagttggcagaaaatatgggaataaaaatcctg 276  Q
    |||||||||||||||||||||||||| |||||||||    
T  59658 gcatagttggcagaaaatatgggaatcaaaatcctg 59623  T

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Target: scaffold0349 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 3462 - 3555
Alignment:
Q  183 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcata-gttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||| |  ||||||||||||||    
T  3462 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcataggttgatagaaaacacaggaataaaaatcct 3555  T

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Target: scaffold0349; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 14397 - 14488
Alignment:
Q  183 ctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | |||||||||  |||||| |  ||||||||||||||    
T  14397 ctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaa-aggcatagttgatagaaaacacaggaataaaaatcct 14488  T

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Target: scaffold0277 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 4533 - 4804
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttctcttgatgcttagtaa 100  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||| | ||||||||| | ||  | |||||| ||| ||| || ||||| ||  |    
T  4533 tagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttattcttatcattttgaaacctcttttcatgctcagcca 4632  T
Q  101 gatgct-caccataactcccactttgatgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagt 199  Q
     ||||| |||||||||| ||  ||| | ||| ||| | || ||||||||||||  |  ||||||| || || || | || || |||||||||||||||||    
T  4633 -atgcttcaccataactacc--tttca-gatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagt 4728  T
Q  200 gaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||| |||||||||||||||||||||||||| |||||| | ||||||  |  |||||| |  ||||||||||||||    
T  4729 gaattatgtggacaagttcgtccaaacaaaacgaagaaaaggcatagaagatagaaaacacaggaataaaaatcct 4804  T

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Target: scaffold0277; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13494 - 13555
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgtt 62  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  13494 tagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgtt 13555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 13674 - 13721
Alignment:
Q  184 tttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaat 231  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||||||    
T  13674 tttgtcttgtagcaatgaataatgtgaacaagttcgtccaagcaaaat 13721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7850 - 7789
Alignment:
Q  1 tagccggacaagttagcagcttgggtaagagccatcttccattgacgcaatcgctccatgtt 62  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  7850 tagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgtt 7789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 7668 - 7623
Alignment:
Q  186 tgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaat 231  Q
    |||||||||||| ||||| ||||| |||||||||||||| ||||||    
T  7668 tgtcttgtagcaatgaataatgtgaacaagttcgtccaagcaaaat 7623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 50; Significance: 1e-19; HSPs: 5)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 43151 - 43050
Alignment:
Q  144 aggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgca 243  Q
    ||||||||||||||||||||  || || |||| ||  |  ||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  43151 aggttccacatcatagaaaattggcaaaactaggcgtccatttttcttgcagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagca 43052  T
Q  244 ta 245  Q
    ||    
T  43051 ta 43050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 34865 - 34809
Alignment:
Q  189 cttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcata 245  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  34865 cttgaagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcata 34809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 27588 - 27532
Alignment:
Q  189 cttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcata 245  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||||||| |||||    
T  27588 cttgaagcaatgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcata 27532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 116931 - 116850
Alignment:
Q  194 agcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    |||||||||| |||||||||||||| ||||| ||||| |||||||| ||||| |||  ||| || || ||||| ||||||||    
T  116931 agcagtgaataatgtggacaagttcatccaagcaaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcct 116850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 35026 - 34966
Alignment:
Q  25 gtaagagccatcttccattgacgcaatcgctccatgttttcctcgttattttggaacttct 85  Q
    |||||||||||||||||||   |||| | ||||||||| |||| |||||||||||||||||    
T  35026 gtaagagccatcttccatttctgcaacctctccatgttatccttgttattttggaacttct 34966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 58334 - 58415
Alignment:
Q  194 agcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcct 275  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||  ||| || | |||||| ||||||||    
T  58334 agcagtgaatgatgtggacaagttcgttcaagcaaaatgaagaagaagcatagttgatagacaagacgggaatgaaaatcct 58415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 17993736 - 17993789
Alignment:
Q  194 agcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagt 247  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  17993736 agcattgaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 17993789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 3279823 - 3279768
Alignment:
Q  194 agcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 249  Q
    |||| |||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  3279823 agcaatgaatgatgtggacaagttcgtccaaacaaaatatagaagaagcatagttg 3279768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 3280026 - 3279986
Alignment:
Q  3 gccggacaagttagcagcttgggtaagagccatcttccatt 43  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  3280026 gccggacaagttagctgcttggttaagagccatcttccatt 3279986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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