View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18266_high_1 (Length: 616)

Name: NF18266_high_1
Description: NF18266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18266_high_1
NF18266_high_1
[»] chr5 (59 HSPs)
chr5 (11-241)||(14980006-14980235)
chr5 (11-241)||(166604-166845)
chr5 (11-241)||(36660384-36660623)
chr5 (11-192)||(43257815-43257998)
chr5 (14-241)||(4011618-4011831)
chr5 (11-199)||(31889741-31889917)
chr5 (11-199)||(34919752-34919933)
chr5 (14-199)||(7388150-7388335)
chr5 (11-199)||(31557295-31557489)
chr5 (11-111)||(4967446-4967546)
chr5 (10-196)||(16886087-16886268)
chr5 (11-192)||(15400177-15400370)
chr5 (70-199)||(42329558-42329700)
chr5 (70-232)||(793618-793793)
chr5 (11-143)||(12167565-12167700)
chr5 (11-192)||(36783361-36783553)
chr5 (11-241)||(4751485-4751729)
chr5 (40-199)||(27810345-27810516)
chr5 (131-236)||(38982231-38982336)
chr5 (134-236)||(33585064-33585166)
chr5 (27-199)||(39059805-39059987)
chr5 (131-199)||(13066712-13066780)
chr5 (131-199)||(29653600-29653668)
chr5 (70-241)||(33822515-33822699)
chr5 (47-199)||(4742257-4742421)
chr5 (131-199)||(4371362-4371430)
chr5 (48-192)||(33693746-33693891)
chr5 (11-121)||(27652274-27652384)
chr5 (28-121)||(8961007-8961099)
chr5 (70-199)||(34171163-34171302)
chr5 (131-199)||(4833719-4833787)
chr5 (131-241)||(32963095-32963202)
chr5 (131-199)||(12992063-12992129)
chr5 (131-241)||(17674165-17674275)
chr5 (135-196)||(32690821-32690882)
chr5 (132-199)||(33741464-33741531)
chr5 (137-196)||(41845374-41845433)
chr5 (131-192)||(28640088-28640149)
chr5 (155-199)||(27658682-27658726)
chr5 (70-118)||(29044811-29044859)
chr5 (136-199)||(36296225-36296286)
chr5 (70-121)||(29653526-29653577)
chr5 (70-121)||(33584987-33585038)
chr5 (149-199)||(7731697-7731747)
chr5 (74-120)||(36296150-36296196)
chr5 (11-116)||(1513072-1513177)
chr5 (82-119)||(4833657-4833694)
chr5 (151-196)||(8961117-8961162)
chr5 (79-116)||(38982168-38982205)
chr5 (156-199)||(12167693-12167736)
chr5 (152-199)||(28316712-28316759)
chr5 (153-192)||(29051620-29051659)
chr5 (68-115)||(32963020-32963066)
chr5 (170-200)||(24436585-24436615)
chr5 (78-116)||(32690753-32690791)
chr5 (208-241)||(32158529-32158562)
chr5 (77-118)||(33741556-33741597)
chr5 (209-241)||(10345098-10345130)
chr5 (209-241)||(42103977-42104009)
[»] chr4 (72 HSPs)
chr4 (14-238)||(52732555-52732782)
chr4 (11-241)||(43421082-43421314)
chr4 (16-244)||(51930550-51930765)
chr4 (13-175)||(34360033-34360197)
chr4 (32-199)||(15501133-15501302)
chr4 (11-238)||(21045113-21045327)
chr4 (11-241)||(44855195-44855438)
chr4 (11-192)||(54512034-54512217)
chr4 (16-199)||(19849079-19849273)
chr4 (11-241)||(31817157-31817373)
chr4 (18-237)||(50072238-50072438)
chr4 (11-236)||(36805408-36805637)
chr4 (11-199)||(32140944-32141119)
chr4 (14-200)||(30022062-30022258)
chr4 (15-199)||(39671068-39671238)
chr4 (14-192)||(45520419-45520607)
chr4 (70-199)||(24259606-24259748)
chr4 (32-199)||(37445655-37445833)
chr4 (11-110)||(56422957-56423056)
chr4 (11-199)||(22212336-22212535)
chr4 (131-241)||(29840028-29840139)
chr4 (130-199)||(6462004-6462073)
chr4 (44-199)||(35928486-35928650)
chr4 (132-236)||(28116203-28116307)
chr4 (70-199)||(17499732-17499874)
chr4 (70-199)||(31941553-31941695)
chr4 (14-196)||(11835105-11835295)
chr4 (70-200)||(47321138-47321282)
chr4 (11-199)||(56556237-56556410)
chr4 (134-199)||(19282501-19282567)
chr4 (11-121)||(34096100-34096210)
chr4 (79-192)||(31987306-31987430)
chr4 (11-200)||(34124289-34124491)
chr4 (70-199)||(45889559-45889700)
chr4 (131-199)||(51434346-51434414)
chr4 (131-190)||(30492732-30492791)
chr4 (70-121)||(54233902-54233953)
chr4 (11-117)||(42672477-42672583)
chr4 (138-196)||(45903501-45903559)
chr4 (79-200)||(38692408-38692516)
chr4 (14-121)||(3093433-3093539)
chr4 (69-200)||(6510112-6510254)
chr4 (15-125)||(38761788-38761898)
chr4 (149-198)||(17317950-17317999)
chr4 (152-199)||(1868208-1868255)
chr4 (70-121)||(4408192-4408243)
chr4 (149-200)||(6232141-6232192)
chr4 (78-199)||(32141163-32141280)
chr4 (70-121)||(51434272-51434323)
chr4 (17-121)||(29289852-29289959)
chr4 (131-187)||(44835341-44835398)
chr4 (139-196)||(54233844-54233900)
chr4 (131-199)||(54091953-54092021)
chr4 (278-317)||(31514710-31514749)
chr4 (149-199)||(6231652-6231702)
chr4 (134-192)||(29289982-29290040)
chr4 (74-119)||(34534111-34534157)
chr4 (150-199)||(4408286-4408335)
chr4 (70-119)||(6462102-6462151)
chr4 (131-199)||(34096010-34096079)
chr4 (132-197)||(55126494-55126559)
chr4 (176-241)||(4505293-4505358)
chr4 (70-118)||(28116334-28116382)
chr4 (14-78)||(45903377-45903441)
chr4 (131-199)||(55548313-55548380)
chr4 (208-243)||(34359977-34360012)
chr4 (70-117)||(55126587-55126634)
chr4 (11-121)||(17317805-17317910)
chr4 (11-100)||(51737280-51737367)
chr4 (209-241)||(31941760-31941792)
chr4 (209-241)||(39985024-39985056)
chr4 (209-241)||(56373493-56373525)
[»] chr3 (75 HSPs)
chr3 (11-234)||(26965463-26965688)
chr3 (11-198)||(27483148-27483337)
chr3 (14-241)||(37225553-37225791)
chr3 (14-199)||(2567970-2568157)
chr3 (11-241)||(34059832-34060063)
chr3 (14-192)||(1340887-1341067)
chr3 (11-241)||(44648365-44648597)
chr3 (11-200)||(36771531-36771722)
chr3 (11-200)||(19552538-19552730)
chr3 (11-241)||(25061662-25061891)
chr3 (11-241)||(647547-647787)
chr3 (11-241)||(790053-790270)
chr3 (11-192)||(31290929-31291111)
chr3 (16-191)||(40048900-40049067)
chr3 (11-198)||(38457460-38457658)
chr3 (11-199)||(46362965-46363165)
chr3 (14-194)||(35239390-35239556)
chr3 (16-198)||(53716029-53716196)
chr3 (11-238)||(43580435-43580677)
chr3 (49-199)||(83295-83455)
chr3 (70-199)||(54933217-54933359)
chr3 (70-241)||(25722473-25722657)
chr3 (81-200)||(43599855-43599976)
chr3 (31-237)||(41287037-41287256)
chr3 (49-199)||(44854314-44854475)
chr3 (10-121)||(2662446-2662557)
chr3 (149-241)||(13485909-13486001)
chr3 (70-199)||(2988622-2988763)
chr3 (11-241)||(54261372-54261615)
chr3 (70-241)||(43169291-43169475)
chr3 (18-196)||(43600152-43600341)
chr3 (70-240)||(43687895-43688081)
chr3 (131-200)||(32303991-32304060)
chr3 (14-196)||(22414757-22414948)
chr3 (113-192)||(45095559-45095636)
chr3 (11-241)||(20512449-20512692)
chr3 (131-241)||(36541447-36541558)
chr3 (12-186)||(38165617-38165783)
chr3 (70-196)||(44645340-44645479)
chr3 (70-199)||(51381720-51381865)
chr3 (134-199)||(22730924-22730989)
chr3 (82-199)||(27027732-27027860)
chr3 (16-240)||(4391862-4392088)
chr3 (47-178)||(9167680-9167810)
chr3 (48-192)||(42740238-42740383)
chr3 (11-121)||(5244673-5244782)
chr3 (79-199)||(3000751-3000883)
chr3 (45-121)||(27039415-27039492)
chr3 (132-197)||(35099453-35099518)
chr3 (134-199)||(36310339-36310404)
chr3 (94-192)||(4476398-4476498)
chr3 (134-198)||(42857148-42857212)
chr3 (131-194)||(52222831-52222892)
chr3 (136-199)||(49470788-49470851)
chr3 (70-121)||(53560754-53560805)
chr3 (149-191)||(15514830-15514872)
chr3 (137-199)||(52202383-52202445)
chr3 (32-109)||(43736846-43736922)
chr3 (137-241)||(42791284-42791388)
chr3 (135-199)||(50420258-50420321)
chr3 (136-200)||(53560663-53560726)
chr3 (79-121)||(16240664-16240706)
chr3 (131-200)||(5244584-5244652)
chr3 (74-115)||(42007078-42007119)
chr3 (209-241)||(2458215-2458247)
chr3 (73-121)||(36541581-36541629)
chr3 (278-317)||(2586983-2587022)
chr3 (14-101)||(22731040-22731126)
chr3 (70-117)||(32303917-32303964)
chr3 (79-116)||(35099389-35099426)
chr3 (281-317)||(2586918-2586954)
chr3 (209-241)||(41287407-41287439)
chr3 (209-241)||(42886706-42886738)
chr3 (209-241)||(51398217-51398249)
chr3 (209-241)||(54261624-54261656)
[»] chr2 (48 HSPs)
chr2 (13-241)||(29795156-29795386)
chr2 (11-176)||(40410473-40410640)
chr2 (11-192)||(40987237-40987418)
chr2 (11-199)||(4840682-4840881)
chr2 (32-199)||(1381748-1381915)
chr2 (32-241)||(4766188-4766383)
chr2 (79-241)||(4536530-4536700)
chr2 (11-197)||(7743401-7743598)
chr2 (14-196)||(1298738-1298931)
chr2 (14-241)||(34225730-34225944)
chr2 (32-194)||(36360351-36360522)
chr2 (11-241)||(43388612-43388853)
chr2 (27-192)||(14378219-14378371)
chr2 (11-241)||(24775145-24775386)
chr2 (131-241)||(33093324-33093434)
chr2 (54-196)||(16316710-16316863)
chr2 (11-173)||(37106886-37107061)
chr2 (32-192)||(42969904-42970065)
chr2 (17-121)||(43460860-43460961)
chr2 (70-199)||(14698010-14698128)
chr2 (79-241)||(1360132-1360306)
chr2 (74-241)||(2459729-2459909)
chr2 (131-199)||(10580944-10581012)
chr2 (131-199)||(18374850-18374918)
chr2 (70-199)||(41984416-41984559)
chr2 (74-241)||(775902-776080)
chr2 (243-287)||(39561608-39561652)
chr2 (134-237)||(43344312-43344412)
chr2 (70-200)||(25332568-25332710)
chr2 (134-192)||(39866762-39866820)
chr2 (74-121)||(4566139-4566186)
chr2 (131-198)||(14511459-14511526)
chr2 (148-199)||(45148055-45148106)
chr2 (149-199)||(6591963-6592013)
chr2 (10-112)||(11171839-11171941)
chr2 (155-240)||(19505934-19506018)
chr2 (70-121)||(10580870-10580921)
chr2 (70-121)||(39866685-39866736)
chr2 (158-248)||(45372645-45372736)
chr2 (32-121)||(43344199-43344288)
chr2 (570-602)||(39561551-39561583)
chr2 (131-178)||(43460792-43460839)
chr2 (70-120)||(33093458-33093508)
chr2 (211-241)||(45148121-45148151)
chr2 (136-185)||(4566214-4566263)
chr2 (79-116)||(14511552-14511589)
chr2 (209-241)||(4133229-4133261)
chr2 (209-241)||(43388571-43388603)
[»] chr7 (55 HSPs)
chr7 (16-235)||(28044101-28044321)
chr7 (12-200)||(36447567-36447757)
chr7 (54-241)||(32275161-32275350)
chr7 (11-241)||(17869194-17869435)
chr7 (47-193)||(22627345-22627495)
chr7 (11-241)||(42121507-42121740)
chr7 (11-189)||(34002087-34002277)
chr7 (45-241)||(40207379-40207574)
chr7 (11-233)||(41905890-41906122)
chr7 (11-200)||(18886667-18886843)
chr7 (14-200)||(33056242-33056433)
chr7 (79-241)||(40298804-40298977)
chr7 (11-199)||(3680878-3681077)
chr7 (34-237)||(42259527-42259740)
chr7 (12-241)||(1103440-1103681)
chr7 (131-237)||(22597191-22597297)
chr7 (18-124)||(34733394-34733500)
chr7 (131-238)||(43813431-43813538)
chr7 (131-241)||(19288434-19288544)
chr7 (70-199)||(19906413-19906553)
chr7 (11-200)||(32345789-32345991)
chr7 (134-238)||(36836019-36836123)
chr7 (70-241)||(26963436-26963620)
chr7 (134-199)||(30514972-30515037)
chr7 (74-199)||(31416768-31416906)
chr7 (70-236)||(36447083-36447261)
chr7 (131-196)||(42044066-42044131)
chr7 (14-192)||(26527356-26527544)
chr7 (131-192)||(19920358-19920419)
chr7 (132-232)||(10684918-10685018)
chr7 (149-241)||(18733410-18733502)
chr7 (22-121)||(42010541-42010640)
chr7 (70-194)||(39117502-39117638)
chr7 (83-195)||(5723006-5723128)
chr7 (70-121)||(10684843-10684894)
chr7 (27-192)||(30833066-30833241)
chr7 (70-121)||(6521907-6521958)
chr7 (70-121)||(19277059-19277110)
chr7 (149-200)||(32873268-32873319)
chr7 (79-124)||(33845433-33845478)
chr7 (47-120)||(47272240-47272313)
chr7 (180-241)||(40799947-40800008)
chr7 (81-124)||(18733540-18733583)
chr7 (74-199)||(29001582-29001696)
chr7 (149-192)||(40805030-40805073)
chr7 (82-121)||(48838711-48838750)
chr7 (70-121)||(36836148-36836199)
chr7 (181-241)||(36912064-36912124)
chr7 (161-200)||(42753705-42753744)
chr7 (135-192)||(47271731-47271789)
chr7 (209-241)||(1742198-1742230)
chr7 (209-241)||(18292290-18292322)
chr7 (209-241)||(19906621-19906653)
chr7 (209-241)||(32345748-32345780)
chr7 (278-314)||(33296028-33296064)
[»] chr1 (63 HSPs)
chr1 (11-199)||(48259818-48260008)
chr1 (11-198)||(1430491-1430666)
chr1 (11-196)||(40060861-40061048)
chr1 (12-199)||(11650056-11650254)
chr1 (11-241)||(84473-84690)
chr1 (15-199)||(24040983-24041155)
chr1 (16-198)||(1428865-1429059)
chr1 (11-241)||(28751363-28751605)
chr1 (14-237)||(5317535-5317769)
chr1 (11-241)||(43929640-43929881)
chr1 (70-240)||(44582792-44582975)
chr1 (11-241)||(50349812-50350054)
chr1 (70-241)||(2458964-2459144)
chr1 (47-241)||(12002202-12002407)
chr1 (47-196)||(17919811-17919971)
chr1 (12-121)||(52403563-52403672)
chr1 (70-199)||(38132204-38132322)
chr1 (11-124)||(6332251-6332364)
chr1 (54-198)||(37437402-37437549)
chr1 (11-154)||(30006182-30006327)
chr1 (71-199)||(254926-255068)
chr1 (11-188)||(10690910-10691074)
chr1 (47-237)||(17806366-17806567)
chr1 (74-199)||(26252116-26252254)
chr1 (70-241)||(22664897-22665075)
chr1 (16-121)||(43105562-43105667)
chr1 (79-199)||(12851739-12851870)
chr1 (49-234)||(43755016-43755187)
chr1 (131-241)||(44024501-44024611)
chr1 (11-200)||(44583769-44583968)
chr1 (131-196)||(45377236-45377301)
chr1 (16-199)||(43738214-43738408)
chr1 (70-196)||(49894807-49894920)
chr1 (47-200)||(5854215-5854381)
chr1 (47-199)||(48319992-48320144)
chr1 (132-248)||(15647150-15647264)
chr1 (135-241)||(15698841-15698949)
chr1 (27-111)||(45749470-45749554)
chr1 (14-192)||(2245791-2245982)
chr1 (131-196)||(50158392-50158458)
chr1 (11-199)||(15698705-15698905)
chr1 (137-199)||(26582923-26582985)
chr1 (70-199)||(28200236-28200379)
chr1 (134-192)||(40719020-40719078)
chr1 (74-197)||(42650267-42650402)
chr1 (151-199)||(9552436-9552484)
chr1 (131-198)||(11134548-11134614)
chr1 (75-121)||(672300-672346)
chr1 (131-191)||(52403482-52403542)
chr1 (70-121)||(9552369-9552420)
chr1 (71-113)||(35149394-35149436)
chr1 (149-199)||(35149485-35149535)
chr1 (137-194)||(50591388-50591446)
chr1 (175-241)||(672397-672463)
chr1 (135-199)||(6332164-6332229)
chr1 (180-241)||(30685482-30685543)
chr1 (137-199)||(9333105-9333168)
chr1 (137-199)||(9356878-9356941)
chr1 (210-241)||(50158232-50158263)
chr1 (14-80)||(50158276-50158342)
chr1 (74-119)||(50591336-50591381)
chr1 (209-241)||(2459212-2459244)
chr1 (156-192)||(43105692-43105728)
[»] scaffold0072 (2 HSPs)
scaffold0072 (14-192)||(12040-12219)
scaffold0072 (209-241)||(11996-12028)
[»] chr6 (31 HSPs)
chr6 (16-241)||(1924634-1924860)
chr6 (11-241)||(29915496-29915740)
chr6 (32-199)||(12828657-12828835)
chr6 (14-194)||(26669056-26669247)
chr6 (11-241)||(23936538-23936778)
chr6 (48-241)||(31275633-31275838)
chr6 (11-199)||(29927205-29927405)
chr6 (11-199)||(32258720-32258910)
chr6 (11-199)||(11785057-11785255)
chr6 (70-199)||(17345148-17345290)
chr6 (131-199)||(4123941-4124009)
chr6 (47-199)||(34576542-34576707)
chr6 (134-199)||(6143082-6143147)
chr6 (16-199)||(34439368-34439567)
chr6 (131-199)||(4132061-4132129)
chr6 (131-233)||(30627056-30627157)
chr6 (134-199)||(6140598-6140662)
chr6 (131-241)||(26189464-26189574)
chr6 (137-199)||(10494854-10494916)
chr6 (149-194)||(3015919-3015964)
chr6 (131-199)||(8052343-8052410)
chr6 (11-119)||(4131903-4132008)
chr6 (55-121)||(10494760-10494827)
chr6 (148-199)||(30626867-30626918)
chr6 (136-200)||(19689927-19689989)
chr6 (70-118)||(26189600-26189649)
chr6 (70-121)||(25932718-25932769)
chr6 (169-199)||(19416857-19416887)
chr6 (70-103)||(6992508-6992541)
chr6 (18-67)||(19689809-19689858)
chr6 (79-115)||(30627184-30627220)
[»] chr8 (58 HSPs)
chr8 (69-241)||(1774084-1774256)
chr8 (32-247)||(22601086-22601311)
chr8 (11-241)||(7612454-7612694)
chr8 (40-233)||(29931225-29931419)
chr8 (11-200)||(27109775-27109976)
chr8 (11-241)||(38329010-38329226)
chr8 (11-200)||(45187251-45187440)
chr8 (45-241)||(18666534-18666717)
chr8 (11-241)||(9022351-9022593)
chr8 (34-236)||(7129262-7129451)
chr8 (70-194)||(34168226-34168355)
chr8 (70-241)||(8471237-8471397)
chr8 (47-196)||(16208951-16209102)
chr8 (12-199)||(36915365-36915561)
chr8 (11-199)||(6839215-6839404)
chr8 (14-120)||(2067788-2067894)
chr8 (78-241)||(2803268-2803433)
chr8 (70-199)||(14541760-14541900)
chr8 (68-241)||(26438932-26439104)
chr8 (11-194)||(32326680-32326875)
chr8 (79-199)||(156239-156358)
chr8 (32-198)||(30788934-30789111)
chr8 (11-199)||(11257540-11257736)
chr8 (70-197)||(34461596-34461737)
chr8 (11-121)||(11335994-11336098)
chr8 (32-195)||(41790117-41790268)
chr8 (137-241)||(35052427-35052531)
chr8 (131-197)||(3095590-3095656)
chr8 (134-199)||(5588563-5588628)
chr8 (79-192)||(8382501-8382625)
chr8 (48-192)||(41414847-41414992)
chr8 (78-189)||(8107191-8107304)
chr8 (131-196)||(27416502-27416565)
chr8 (12-113)||(32737861-32737961)
chr8 (134-196)||(33870755-33870817)
chr8 (131-199)||(39970323-39970390)
chr8 (12-77)||(24732079-24732144)
chr8 (131-192)||(32661310-32661371)
chr8 (131-199)||(42946120-42946188)
chr8 (136-199)||(32061515-32061578)
chr8 (74-196)||(13108989-13109123)
chr8 (134-192)||(18673189-18673247)
chr8 (70-118)||(27416593-27416641)
chr8 (79-121)||(39970412-39970454)
chr8 (149-190)||(2812817-2812858)
chr8 (47-119)||(5044218-5044290)
chr8 (15-115)||(42709949-42710048)
chr8 (156-199)||(3203325-3203368)
chr8 (14-101)||(5588426-5588512)
chr8 (149-192)||(43938125-43938168)
chr8 (149-195)||(2067725-2067770)
chr8 (170-200)||(11335839-11335869)
chr8 (83-121)||(32661392-32661430)
chr8 (16-68)||(2812916-2812968)
chr8 (209-241)||(11165484-11165516)
chr8 (209-241)||(11168890-11168922)
chr8 (209-241)||(34168126-34168158)
chr8 (209-241)||(39463464-39463496)
[»] scaffold0119 (1 HSPs)
scaffold0119 (14-194)||(1546-1737)
[»] scaffold0047 (1 HSPs)
scaffold0047 (70-241)||(70467-70651)
[»] scaffold0238 (1 HSPs)
scaffold0238 (11-192)||(15995-16186)
[»] scaffold0003 (2 HSPs)
scaffold0003 (131-199)||(321724-321792)
scaffold0003 (70-121)||(321815-321866)
[»] scaffold0189 (1 HSPs)
scaffold0189 (78-241)||(13081-13255)
[»] scaffold0580 (4 HSPs)
scaffold0580 (149-241)||(1597-1691)
scaffold0580 (149-241)||(9336-9430)
scaffold0580 (14-93)||(1689-1768)
scaffold0580 (14-93)||(9428-9507)
[»] scaffold0194 (2 HSPs)
scaffold0194 (149-199)||(8156-8206)
scaffold0194 (11-80)||(8277-8346)
[»] scaffold0886 (1 HSPs)
scaffold0886 (11-199)||(4063-4263)
[»] scaffold0519 (2 HSPs)
scaffold0519 (136-199)||(7791-7852)
scaffold0519 (88-121)||(7732-7765)
[»] scaffold0007 (1 HSPs)
scaffold0007 (79-113)||(158195-158229)
[»] scaffold0758 (1 HSPs)
scaffold0758 (208-241)||(6241-6274)
[»] scaffold0060 (1 HSPs)
scaffold0060 (155-199)||(31623-31667)


Alignment Details
Target: chr5 (Bit Score: 170; Significance: 6e-91; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 14980006 - 14980235
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14980006 cacagattaagaaatggaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 14980105  T
Q  111 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagc 210  Q
    |||||| || ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||    
T  14980106 attgtgaga-aaaagttggagagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaatttttttagc 14980204  T
Q  211 taaagtgacactcattttgaaacggagggag 241  Q
    ||||||||| |||||||||||||||||||||    
T  14980205 taaagtgactctcattttgaaacggagggag 14980235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 166604 - 166845
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||| ||||||| ||| || ||||||||||||| |||||||| ||   ||||| |||||||||||| |||||||||||||||||    
T  166604 cacagattaaggaatgaaatgaaataatcattagaaataacacttttactaaactgcccttgtattatatgaaaaagacaaacttaaagttgcattgaaa 166703  T
Q  111 attgtgtgagaaaaga--tgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| |  ||| |         |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  166704 attgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 166803  T
Q  200 annnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
             ||||||| |||||||||||||||||||||||||    
T  166804 tttttttttgctaaagcgacactcattttgaaacggagggag 166845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 36660623 - 36660384
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||| ||||||| ||| || ||||||||||||| ||| || | ||||||||||||||||||||||| ||||||||| ||  |||    
T  36660623 cacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgtccttactttataagaaaaagacaaacttaaagttgtataaaaa 36660524  T
Q  111 attgtgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaan 201  Q
    |||||| |||||||| ||| |         |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||      
T  36660523 attgtgagagaaaagctggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaatt 36660424  T
Q  202 nnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
           |||||||||||||||||||||||||| ||||||    
T  36660423 ttttttggctaaagtgacactcattttgaaacgaagggag 36660384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 43257815 - 43257998
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||  |||  ||| ||||||| ||| || ||||||||| ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||    
T  43257815 cacagattaaagaatgaaatgaaataatcattagacataacacttatactaaactgcccttactttataagaaatagacaaacttaaagttgcattgaaa 43257914  T
Q  111 attgtgtgagaaa--agatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||  || ||  |||| |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||    
T  43257915 attgtgtgagaaaacagttgaagaggataaagttgaaagaaaaaaattaaagttatattggaaatgtaaagtgacattcatttt 43257998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 14 - 241
Target Start/End: Original strand, 4011618 - 4011831
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||| |||| ||||||| ||||||||||||  |||| | ||| |||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  4011618 agattaagaaatggaatcaaataatcattggatataacgttttttctaaaatgcccttattttataagaaaaagataaaattaaagttgcattgaaaatt 4011717  T
Q  114 gtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaa 213  Q
    ||||||||||             ||||||||||| |||||||||||||||||| |||||||||||||||| |||||||| |||| ||       ||||||    
T  4011718 gtgtgagaaa-------------aaagttggaagaaaaaaattaaagttgtatcggaaatgtaaagtgacgttcattttaaaac-aatttttttagctaa 4011803  T
Q  214 agtgacactcattttgaaacggagggag 241  Q
    ||||||||||||||||||| ||||||||    
T  4011804 agtgacactcattttgaaaaggagggag 4011831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 31889917 - 31889741
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| |||| |||||||||||| |||||||  ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31889917 cacagattaagaaatggaatgaaataattattgaatataacgttttcactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 31889818  T
Q  111 attgtgtgagaaaagatggggagggtaaagttgg-aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||             | |||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31889817 attgtgtgaga-------------gaaaagttggaaaaaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttgaaacaa 31889741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 34919933 - 34919752
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||||||||||| |||||| ||| || |||||| |||||||| ||||||||||||||||||||||| ||||       || | |    
T  34919933 cacagattaaggaatgaaataaaataatcattggacatagcaattttactaaactgcccttactttataagaaaaagacaaacttaa-------ttaata 34919841  T
Q  111 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||| |||||||| || |||| || |||||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  34919840 attgtgagagaaaagttgaggagagtcaagttggaagaaaaaaattaaagttatattaggaatgtaaagtgacattcattttgaaacaa 34919752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 7388150 - 7388335
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||| ||||  ||||||||||| ||| || |||| | |||||| ||| || | ||| ||||||||||||||| ||| ||||||||||||||||||||    
T  7388150 agattaataaatgaaataaaataatcattagacataatatttttactaaattgtccttattttataagaaaaagataaatttaaagttgcattgaaaatt 7388249  T
Q  114 gtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||||||| ||  |||| ||||| ||||||  |||||||||| |||||||| |||| |||||||||||||||||| ||||||    
T  7388250 gtgagagaaaagttgaagaggataaagatggaagataaaaattaaaattgtattgaaaatataaagtgacattcattttaaaacaa 7388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 31557295 - 31557489
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcc-tttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| |||||||||| |||| ||||||| |||  |||||| |||||||  ||||  || |||||||||||||||||||||||| ||||||||||||||||    
T  31557295 cacatattaagaaatagaatgaaataatcattaaatataatacttttagtaaacaaccctttactttataagaaaaagacaaacttaaagttgcattgaa 31557394  T
Q  110 aattgtgtgagaaaaga-----tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| || |     |   ||   |||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  31557395 aattgtgtgagagaatagtatttattgaaaataaagttggaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 31557489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 4967446 - 4967546
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| |||| ||||||| |||||||||||| ||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  4967446 cacagattaagaaatggaatgaaataatcattggatataacgcttttactaaactgcccttactttataaaaaaaagacaaaattaaagttgcattgaaa 4967545  T
Q  111 a 111  Q
    |    
T  4967546 a 4967546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 16886268 - 16886087
Alignment:
Q  10 gcacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||||||| ||| |||  ||| ||||||||||| ||  |||||| ||||| |||||||| ||||||||||| ||||        ||||||||||||||||    
T  16886268 gcacagatcaaggaatgaaatgaaataattattagacgtaacacatttactaaactgcccttactttataacaaaac-------ttaaagttgcattgaa 16886176  T
Q  110 aattgtgtga--gaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||||  |||||| ||| ||||||||||||||||| |||||||||||||||||||| ||||| |||| ||| ||||||||||||    
T  16886175 aattgtgtgatagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgcaaagcgacgttcattttgaaa 16886087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 15400370 - 15400177
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttac-caaactgcctttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||||||||  ||| | |||||||||||||||||||||  ||| |||||||| ||||| |    
T  15400370 cacagattaaaaaattgaatgaaataattattagatataacacttttactaaaattccctttactttataagaaaaaggaaaacttaaagtttcattgga 15400271  T
Q  110 aattg--tgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||  || |||||||| | |          |||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  15400270 aattgtatgagagaaaagtttgagtatttattgaggataaagttggaagaagaaaattaaagttgtattggaaatgtaaagtgacattcatttt 15400177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 42329558 - 42329700
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||    |||| ||  |         |||||||||||||||| ||||||||    
T  42329558 ttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattaagggtaaagttggaagaaaaaaatt 42329657  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42329658 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 42329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 70 - 232
Target Start/End: Original strand, 793618 - 793793
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||    |||| |   |         |||||| ||||||||| ||||||||    
T  793618 ttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagtttaagtatttattgagggtagagttggaagaaaaaaatt 793717  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaa 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||    
T  793718 aaagttgtattggaaatgtaaagtgacattcattttgaaacaaatttttttggctaaagcgacactcattttgaaa 793793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 12167565 - 12167700
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||||||| ||||||| ||| || | ||||||||||| |||||||| |||||||||||||||| | |||| |||||||||||||||||    
T  12167565 cacaaattaagaaattgaatgaaataatcattagacaaaacacttttactaaactgcccttactttataagaaaaggtcaaacttaaagttgcattgaaa 12167664  T
Q  111 at---tgtgtgagaaaagatggggagggtaaagttg 143  Q
    ||   |||| |||||||| ||| |||||||||||||    
T  12167665 atttgtgtgagagaaaagttggagagggtaaagttg 12167700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 36783553 - 36783361
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||| ||  ||| ||||||| ||| || |||||| |||||| ||| |||| ||||||  || |||||||||||| |||||||||||||||||    
T  36783553 cacagattaagagatgaaatgaaataatcattagacataacatttttactaaattgcccttacttgttatgaaaaagacaaatttaaagttgcattgaaa 36783454  T
Q  111 attgtgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||  |||||||| ||| |         ||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  36783453 attgtgtgagagaaaagttggagaatttactaagggtaaagttagaagaaaaaaattagagttgtattggaaatgtaaagtgacattaatttt 36783361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 4751485 - 4751729
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||| ||||||| ||| || ||||||||||||| ||||  || ||  |||||| |||||| ||||| ||||||||| |||||||    
T  4751485 cacatattaaggaatgaaatgaaataatcattagacataacacttttactaaacaacccttgttttatatgaaaaaaacaaacttaaagttgaattgaaa 4751584  T
Q  111 attgtgtgagaaaaga--tgggg---------agggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||||||||||||| |  ||| |         |||||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  4751585 attgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattagaaatataaagtgacattcattttgaaaca 4751684  T
Q  199 a--annnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |  |        ||||||| |||||||||||||||||||||||||    
T  4751685 attattttttttgctaaagcgacactcattttgaaacggagggag 4751729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 27810516 - 27810345
Alignment:
Q  40 attggatataacacttttaccaaactgcctttactttataagaaaaa-gacaaaattaaagttgcattgaaaattgtgtgagaaaaga---tggg----- 130  Q
    |||| ||||||||||||||| |||||||| ||  |||||| |||||| || ||| ||||||||| ||||||||||||||||||||| |   || |         
T  27810516 attgcatataacacttttactaaactgccattgttttatatgaaaaaagataaatttaaagttgtattgaaaattgtgtgagaaaaaagtttgagtattt 27810417  T
Q  131 ---gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
       |||| |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27810416 attgaggataaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 27810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 38982231 - 38982336
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttga 230  Q
    |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||| ||||||        ||||||||||||||||||| |||    
T  38982231 gagggtaaagttgggagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaattttttttagctaaagtgacactcattatga 38982330  T
Q  231 aacgga 236  Q
    ||||||    
T  38982331 aacgga 38982336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 134 - 236
Target Start/End: Original strand, 33585064 - 33585166
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaac 233  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||        | ||||||||||||||||||||||||    
T  33585064 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttaaaacaattttttttatctaaagtgacactcattttgaaac 33585163  T
Q  234 gga 236  Q
    |||    
T  33585164 gga 33585166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 39059987 - 39059805
Alignment:
Q  27 gaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga 126  Q
    |||| ||||||| ||| || ||||||||||||| ||||| || ||  |||||| |||||| ||||| |||||||||||||||||||||| |||||||| |    
T  39059987 gaatgaaataatcattagacataacacttttactaaactacccttgttttatatgaaaaaaacaaacttaaagttgcattgaaaattgtatgagaaaaaa 39059888  T
Q  127 tggg-----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |  |           |||||||||||| ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  39059887 tttggagtatttattgagggtaaagttagaa-gaaaaaattaaagttgtattgaaaatgtaaagcaacattcattttgaaacaa 39059805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 13066780 - 13066712
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13066780 gagggtaaagttggaaaaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 13066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 29653600 - 29653668
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  29653600 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgcaacaa 29653668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 70 - 241
Target Start/End: Original strand, 33822515 - 33822699
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||    |||| ||  |         | |||||||||| ||| | ||||||    
T  33822515 ttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaaggtaaagttgaaagaacaaaatt 33822614  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||| |||||||||||||||||||||||||| |||          ||||||||| ||||||||||||||||||||||    
T  33822615 aaagttgtattgaaaatgtaaagtgacattcattttgaatcaattttttttgactaaagtgatactcattttgaaacggagggag 33822699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 4742257 - 4742421
Alignment:
Q  47 ataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga--tgggg---------aggg 135  Q
    ||||||||||||| ||||  || ||  |||||| |||||| ||||| ||||||||| ||||||||||||||||||||| |  ||| |         ||||    
T  4742257 ataacacttttactaaacaacccttgttttatatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgagaaaaaagttggagtatttattgaggg 4742356  T
Q  136 taaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| |||| ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  4742357 taaagttggaagaaaaaaaattaaagttgtattagaaatataaagtgacattcattttgaaacaa 4742421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 4371430 - 4371362
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| | || ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4371430 gagggtaaagtttggagaaaaaaattaaagttgtattggaaatgtaaagtgacgttcattttgaaacaa 4371362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 33693891 - 33693746
Alignment:
Q  48 taacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga--tggggagggtaaagttgga 145  Q
    |||||||||||| || ||||| ||| ||||||| ||||  | ||  ||||||||||||||||||||||||||||||| |  || ||| |||||| |||||    
T  33693891 taacacttttactaa-ctgcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaagttgaggaaggtaaaattgga 33693793  T
Q  146 aggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    || |||||||||||||  ||||  ||||||||||||||||| |||||    
T  33693792 agaaaaaaattaaagtgatattaaaaatgtaaagtgacatttatttt 33693746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 27652274 - 27652384
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| |||||||||| | |   |  |||||| |||||| ||| |  | ||||||||||||||||||||||| |||||||||||||||||    
T  27652274 cacagattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaagacaaatttaaagttgcattgaaa 27652373  T
Q  111 attgtgtgaga 121  Q
    |||||||||||    
T  27652374 attgtgtgaga 27652384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 8961007 - 8961099
Alignment:
Q  28 aataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||||||||| ||| || ||||||||||||| |||||| ||| | ||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  8961007 aataaaataatcattagacataacacttttactaaactgtctt-attttataagaaaaagataaatttaaagttgcaatgaaaattgtgtgaga 8961099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 34171302 - 34171163
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga---tggg--------gagggtaaagttggaaggaaaaaattaa 158  Q
    |||||||||||||| |||||||| |||||||||||||||||||| ||||||| || |   || |        || |||||||||||||  ||||||||||    
T  34171302 ttactttataagaacaagacaaacttaaagttgcattgaaaattctgtgagagaaaagtttgagtatttattgaaggtaaagttggaaa-aaaaaattaa 34171204  T
Q  159 agttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||| ||||||||||||||||||||||| ||||||    
T  34171203 agttgtattgaaaatgtaaagtgacattcattttaaaacaa 34171163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 4833719 - 4833787
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||||  ||||||||||||||||||    
T  4833719 gagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcaacattcattttgaaacaa 4833787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 32963095 - 32963202
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttga 230  Q
    |||||||||||| |||  |||||| ||||||||||||||||||||||||||  |||||||||||||||||       | ||||||||||||||||||| |    
T  32963095 gagggtaaagtttgaa--aaaaaaataaagttgtattggaaatgtaaagtggtattcattttgaaacaaactttttga-ctaaagtgacactcattttaa 32963191  T
Q  231 aacggagggag 241  Q
    |||||| ||||    
T  32963192 aacggatggag 32963202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 12992129 - 12992063
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||| |||||||||||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  12992129 gaggataaagttggaa--aaaaaattaaagttgtattagaaatgtaaaatgacattcattttgaaacaa 12992063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 17674275 - 17674165
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttga 230  Q
    |||| ||||||| || | |||||||||||||| ||||| ||| ||||||||||||||||||||||||||          ||||||||||||||||||| |    
T  17674275 gaggataaagttagacgtaaaaaattaaagttttattgaaaacgtaaagtgacattcattttgaaacaattttatttgactaaagtgacactcattttaa 17674176  T
Q  231 aacggagggag 241  Q
    |||||||||||    
T  17674175 aacggagggag 17674165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 32690821 - 32690882
Alignment:
Q  135 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||||||||  || ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32690821 gtaaagttgagagaaaaaaattaaagttgtatttgaaatgtaaagtgacattcattttgaaa 32690882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 33741531 - 33741464
Alignment:
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| |||| ||||||| ||||||| |||| |||||||||||||||||||| |||||||||    
T  33741531 agggtaaagtttgaagaaaaaaatgaaagttgcattgaaaatgtaaagtgacattcatattgaaacaa 33741464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 41845374 - 41845433
Alignment:
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  41845374 aaagttgaaagaaaaaaattaaaattgtattgaaaatgtaaagtgacattcattttgaaa 41845433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 28640149 - 28640088
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||| || ||||||||||||||| |||| ||||||||||||||||| |||||    
T  28640149 gagggtaaagttgggagaaaaaaattaaagttgaattgaaaatgtaaagtgacatttatttt 28640088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 27658682 - 27658726
Alignment:
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  27658682 ttaaagttatattggaaatgtaaagtgacattcattttgaaacaa 27658726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 29044859 - 29044811
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtg 118  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  29044859 ttactttataagaataagataaacttaaagttgcattgaaaattgtgtg 29044811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 36296225 - 36296286
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||  |||||||||||||||||||||||||| |||| || ||||||||| ||||||    
T  36296225 taaagttggaa--aaaaaattaaagttgtattggaaatggaaagcgatattcattttaaaacaa 36296286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 29653526 - 29653577
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||||||||||||| |||||||| |||||||||||||  |||||||||||||    
T  29653526 ttactttataagaacaagacaaacttaaagttgcattagaaattgtgtgaga 29653577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 33584987 - 33585038
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||||||| | ||| |||||||| ||||||||||||||||||||||||||||    
T  33584987 ttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgaga 33585038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 7731697 - 7731747
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||| ||| |||| |||||||||||||||||| ||||||    
T  7731697 aaaaaattaaagttgttttgaaaatataaagtgacattcattttaaaacaa 7731747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 36296150 - 36296196
Alignment:
Q  74 tttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag 120  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||||    
T  36296150 tttataggaacaagacaaacttaaagttgcattgaaaattgtgtgag 36296196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 1513177 - 1513072
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||| ||||||| |||  | |||| ||||||  |||||| || |||||||| |||| ||| ||||| |||||||||| ||||||    
T  1513177 cacaaattaagaaatgaaatgaaataatcattaaacataatacttttttcaaactacccttactttacaagagaaaaacaaacttaaagttgctttgaaa 1513078  T
Q  111 attgtg 116  Q
    ||||||    
T  1513077 attgtg 1513072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 4833657 - 4833694
Alignment:
Q  82 aaaaagacaaaattaaagttgcattgaaaattgtgtga 119  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  4833657 aaaaagacaaacttaaagttgcattgaaaattgtgtga 4833694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 8961117 - 8961162
Alignment:
Q  151 aaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  8961117 aaaattaaagttgcattggaattgtaaagtgacatccattttgaaa 8961162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 38982168 - 38982205
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtg 116  Q
    |||||||||||||| |||||||||||||||||||||||    
T  38982168 aagaaaaagacaaacttaaagttgcattgaaaattgtg 38982205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 12167693 - 12167736
Alignment:
Q  156 taaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  12167693 taaagttgtattgaaaatgtagagtgacattcattttaaaacaa 12167736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 28316759 - 28316712
Alignment:
Q  152 aaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| |||| |||| ||||||| ||||||||||||    
T  28316759 aaattaaagttgtattgaaaatataaaatgacatttattttgaaacaa 28316712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 192
Target Start/End: Original strand, 29051620 - 29051659
Alignment:
Q  153 aattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  29051620 aattaaagttgtattagaaaggtaaagtgacattcatttt 29051659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 32963020 - 32963066
Alignment:
Q  68 ctttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 115  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  32963020 ctttactttataagaaaaagacaaacttaaa-ttgcattggaaattgt 32963066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 170 - 200
Target Start/End: Original strand, 24436585 - 24436615
Alignment:
Q  170 aaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||||||||||||||||||||    
T  24436585 aaatgtaaagtgacattcattttgaaacaaa 24436615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 32690753 - 32690791
Alignment:
Q  78 taagaaaaagacaaaattaaagttgcattgaaaattgtg 116  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  32690753 taagaaaaagacaaacctaaagttgcattgaaaattgtg 32690791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 32158562 - 32158529
Alignment:
Q  208 agctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||| |||||||||||||||||||||||||    
T  32158562 agctaaagcgacactcattttgaaacggagggag 32158529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 33741597 - 33741556
Alignment:
Q  77 ataagaaaaagacaaaattaaagttgcattgaaaattgtgtg 118  Q
    |||||||||||| ||| |||||||||||||| ||||||||||    
T  33741597 ataagaaaaagataaacttaaagttgcattggaaattgtgtg 33741556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 10345098 - 10345130
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  10345098 gctaaagcgacactcattttgaaacggagggag 10345130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 42104009 - 42103977
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  42104009 gctaaagcgacactcattttgaaacggagggag 42103977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 5e-73; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 52732782 - 52732555
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||| |||| |||| ||||||| |||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  52732782 agattaaaaaatggaatgaaataatcattggatataacacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaatt 52732683  T
Q  114 gtgt--gagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagc 210  Q
    ||||  |||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||        | |    
T  52732682 gtgtgagagaaaagttggggagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaacaattttttttaac 52732583  T
Q  211 taaagtgacactcattttgaaacggagg 238  Q
    ||||||||||||||||||||||||||||    
T  52732582 taaagtgacactcattttgaaacggagg 52732555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 43421082 - 43421314
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||||||| |||| ||||||| ||||||||||| |||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||     
T  43421082 cacaaattaagaaatggaatgaaataatcattggatataatacttttactaaattgctcttactttataagaaaaagacaaaattaaagttgcattgaat 43421181  T
Q  111 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnna 208  Q
    |||||||  |||||||  ||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||            
T  43421182 attgtgtgagagaaaacctggagagggtaaagttggaagaaaaaaattaaagttgtatgggaaatgtaaagtgaccttcattttgaaacaaatatttttg 43421281  T
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||| ||||||||| |||||||||||| ||||    
T  43421282 gctaaggtgacactcgttttgaaacggaaggag 43421314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 51930765 - 51930550
Alignment:
Q  16 attaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 115  Q
    |||| ||||| |||| ||||||| |||||||||||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  51930765 attatgaaatggaatgaaataataattggatataacgcttttactaaactgcccttactttataagaaaatgacaaaattaaagttgcattgaaaattgt 51930666  T
Q  116 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaag 215  Q
    ||||||             | ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||       | ||||||    
T  51930665 gtgaga-------------gaaaagttggaagaaaaaaattaaaattgtattggaaatgtaaagcgacattcattttgaaacaaatttttttaactaaag 51930579  T
Q  216 tgacactcattttgaaacggagggagcaa 244  Q
    |||||||||||||||||||||||||||||    
T  51930578 tgacactcattttgaaacggagggagcaa 51930550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 34360197 - 34360033
Alignment:
Q  13 cagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaat 112  Q
    ||||||||| |||  ||| ||||||| ||| |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  34360197 cagattaaggaatgaaatgaaataatcattagatataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaat 34360098  T
Q  113 tgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgt 175  Q
    |||||  |||||||| ||| ||||||||||||||||| |||||| ||||||||||||| ||||||    
T  34360097 tgtgtgagagaaaagttggagagggtaaagttggaagaaaaaaaataaagttgtattgaaaatgt 34360033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 32 - 199
Target Start/End: Original strand, 15501133 - 15501302
Alignment:
Q  32 aaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatgg 129  Q
    ||||||| ||| || |||||| |||||| |||||||| ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||  |||| ||     
T  15501133 aaataatcattagacataacatttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattaaaaattgtgtgagagaaaagttga 15501232  T
Q  130 ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
     ||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15501233 agagagtaatgttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttcaaacaa 15501302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 21045327 - 21045113
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| ||| |||| ||||||| |||||||||||  ||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21045327 cacagattaaggaatggaatgaaataatcattggatataaggcttttattaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 21045228  T
Q  111 attgtgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnag 209  Q
    |||||||||||             | |||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||        |    
T  21045227 attgtgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaaatttttttgg 21045141  T
Q  210 ctaaagtgacactcattttgaaacggagg 238  Q
    || || |||||||||||||||||||||||    
T  21045140 ctcaa-tgacactcattttgaaacggagg 21045113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 44855438 - 44855195
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||||||| |||| ||||||| |||| ||||||| ||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  44855438 cacaaattaagaaatagaatgaaataatcattgaatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaa 44855339  T
Q  111 attgtgt--gagaaaagatgg---------ggagggtaaag--ttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    |||||||  |||||||| |||          ||||||||||  |||||||  |||| |||||||||||||||||||||||||||||||| |||| |||||    
T  44855338 attgtgtgagagaaaagttggattatttattgagggtaaagaattggaagagaaaacttaaagttgtattggaaatgtaaagtgacatttatttcgaaac 44855239  T
Q  198 aaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||         |||||| ||||||||||||||||||||| ||||    
T  44855238 aatttttttttgctaaaatgacactcattttgaaacggatggag 44855195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 54512217 - 54512034
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||| ||||||| ||||||||||||  |||||| |||||||  |||||||||||||||| |||||||||||||||||||||||     
T  54512217 cacatattaagaaatgaaatgaaataataattggatataacgtttttactaaactgctcttactttataagaaaatgacaaaattaaagttgcattgaac 54512118  T
Q  111 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||  |||||||| ||| |||| ||||||||||||  ||||||||||||| ||||  ||||||||||||| |||||||||    
T  54512117 attgtgtgagagaaaagttggagaggataaagttggaagataaaaattaaagttatattaaaaatgtaaagtgatattcatttt 54512034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 19849273 - 19849079
Alignment:
Q  16 attaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 115  Q
    ||||||||||  |||||||||||||||  |||||||| |||||| |||||||| | ||||||||||||||| ||||| ||||||||||||||||||||||    
T  19849273 attaagaaatgaaataaaataattattacatataacatttttactaaactgccctcactttataagaaaaaaacaaacttaaagttgcattgaaaattgt 19849174  T
Q  116 gt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||  |||||||| |||          ||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  19849173 gtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaattgtaaagtgaaattcattttaaaacaa 19849079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 31817157 - 31817373
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataag-aaaaagacaaaattaaagttgcattgaa 109  Q
    |||| |||||||||| |||| ||||||| ||||||||||||  |||||| ||||| || |||||||||||| ||||| ||||||||||||||||||||||    
T  31817157 cacaaattaagaaatggaatgaaataatcattggatataacgtttttactaaacttcccttactttataagaaaaaatacaaaattaaagttgcattgaa 31817256  T
Q  110 aattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnag 209  Q
    ||||||||||||             | ||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||||||        |    
T  31817257 aattgtgtgaga-------------gaaaagttggaagaaaaaaa--aaagttgcattggaaatgtaaagtgacattcattttgaaacaaatttttttgg 31817341  T
Q  210 ctaaagtgacactcattttgaaacggagggag 241  Q
    |||| |||||||||||||||||||||||||||    
T  31817342 ctaatgtgacactcattttgaaacggagggag 31817373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 50072438 - 50072238
Alignment:
Q  18 taagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt 117  Q
    |||||||| |||| ||||||| ||||||||||||  |||||| |||||||| |||||||||||||      |||||||||||||||||||||||||||||    
T  50072438 taagaaatggaatgaaataatcattggatataacgtttttactaaactgcccttactttataaga------caaaattaaagttgcattgaaaattgtgt 50072345  T
Q  118 gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtg 217  Q
    |||||||             |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||         |||||||||    
T  50072344 gagaaaa-------------aagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtg 50072258  T
Q  218 acactcattttgaaacggag 237  Q
    ||||||||||||||||||||    
T  50072257 acactcattttgaaacggag 50072238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 36805408 - 36805637
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||| ||||||| ||| || ||||||||||||| |||||| | ||| |||||| |||||||||||| ||||||||| |||||||    
T  36805408 cacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgtccttagtttatatgaaaaagacaaacttaaagttgtattgaaa 36805507  T
Q  111 attgtgtgag--aaaagatg--gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnn 206  Q
    ||||||||||  ||||| ||  | |||| |||||||||||| |||||||||||||||||||| ||||||||| | |||| |||||| ||||||           
T  36805508 attgtgtgagaaaaaagttggagtgaggttaaagttggaagaaaaaaattaaagttgtattgcaaatgtaaaataacatacattttaaaacaatattttt 36805607  T
Q  207 nagctaaagtgacactcattttgaaacgga 236  Q
     |||||||| ||||||||||||||||||||    
T  36805608 tagctaaagcgacactcattttgaaacgga 36805637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 32140944 - 32141119
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||||||| ||||||| ||| || ||||||||||||| ||||||||  ||||||||||  ||||||||||  |||| |||||||||||    
T  32140944 cacagattaagaaattgaatgaaataatcattagacataacacttttactaaactgcccctactttataaacaaaagacaaacataaatttgcattgaaa 32141043  T
Q  111 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||             | ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32141044 attgtgtgaga-------------gaaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtggcattcattttgaaacaa 32141119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 14 - 200
Target Start/End: Complemental strand, 30022258 - 30022062
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactt-tataagaaaaagacaaaattaaagttgcattgaaaat 112  Q
    |||||||| |||  ||||||||||| |||  ||||||||||||||| ||||| ||||  ||| ||||||||||||||||| | |||||||||||||||||    
T  30022258 agattaaggaatgaaataaaataatcattatatataacacttttactaaactacctt--cttgtataagaaaaagacaaactcaaagttgcattgaaaat 30022161  T
Q  113 tgtgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||  |||| ||  |         |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  30022160 tgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtcaagtaacattcattttgaaacaaa 30022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 39671068 - 39671238
Alignment:
Q  15 gattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattg 114  Q
    ||||||||||| |||| |||| || ||| || ||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  39671068 gattaagaaatggaatgaaattatcattagacataacacatttactaaactacctttactttataagaaaaaaacaaacttaaagttgcattgaaaattg 39671167  T
Q  115 tgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||             | |||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  39671168 tgtgaga-------------gaaaagtt-gaaagaaaaaattaaagttgtattggaaatgtaaaacgacattcattttgaaacaa 39671238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 45520419 - 45520607
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||| |||||||||||| ||| || ||||||||||||| || ||||| |||| ||||||||| |||||||| ||||||||||||| ||||||    
T  45520419 agattaagaaatggaataaaataatcattagacataacacttttactaagctgcccttacattataagaataagacaaacttaaagttgcattaaaaatt 45520518  T
Q  114 g--tgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |  || |||||||| | | |         ||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  45520519 gtatgagagaaaagtttgagtatttatcaaggataaagttggaa-gaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 45520607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 24259748 - 24259606
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||    |||| ||| |         |||||||||||||||| ||||||||    
T  24259748 ttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaatt 24259649  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  24259648 aaagttgcattggaaatgtaaagtgacattcattttgaaacaa 24259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 32 - 199
Target Start/End: Complemental strand, 37445833 - 37445655
Alignment:
Q  32 aaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtg--agaaaagatgg 129  Q
    ||||||| ||| || ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||  ||||||  | |    
T  37445833 aaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaatttaaagttgcattaaaaattatgtgaaagaaaaatttg 37445734  T
Q  130 ---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
              ||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||| ||||||    
T  37445733 aatatttattgagggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 37445655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 56422957 - 56423056
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| |||| ||||||| |||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| |||||||||||    
T  56422957 cacagattaagaaatcgaatgaaataatcattggatataacgcttttactaaactgtctttactttataagaaaaagacgaaattaaaattgcattgaaa 56423056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 22212535 - 22212336
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||| ||||||| ||| || ||||||||||||| |||||||||||  ||||||  |||||  |||| ||||||||| |||||||    
T  22212535 cacatattaaggaatgaaatgaaataatcattagacataacacttttacaaaactgcctttgttttatataaaaaactcaaacttaaagttgtattgaaa 22212436  T
Q  111 attgtgtgagaaaa--gatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||  | ||| |         |||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||    
T  22212435 attgtgtgagaaaaatgttggagtatttattgagggtaaagttggaagaaaaaaattaaagttatattggaaatgtaaggtgacattcattttaaaacaa 22212336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 29840139 - 29840028
Alignment:
Q  131 gagggtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttg 229  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||         |||||||||||| ||||||||    
T  29840139 gagggtaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtgacagtcattttg 29840040  T
Q  230 aaacggagggag 241  Q
    ||||||||||||    
T  29840039 aaacggagggag 29840028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 6462073 - 6462004
Alignment:
Q  130 ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6462073 ggagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttgaaacaa 6462004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 35928650 - 35928486
Alignment:
Q  44 gatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatgggg---------agg 134  Q
    |||||| ||||||||| ||| |||| | ||||||||||||||||| ||| ||||| |||||||||||||||||  ||||| | ||  |         |||    
T  35928650 gatatatcacttttactaaattgccatgactttataagaaaaagataaacttaaaattgcattgaaaattgtgaaagaaacgttgcagtatttattgagg 35928551  T
Q  135 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  35928550 gtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgatatttattttgaaacaa 35928486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 28116307 - 28116203
Alignment:
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaa 231  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||         ||||||| |||||||||||||||    
T  28116307 agggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttgaaataattttttttggctaaagcgacactcattttgaa 28116208  T
Q  232 acgga 236  Q
    |||||    
T  28116207 acgga 28116203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 17499732 - 17499874
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||    |||| | | |         |||||||||||||||| ||||||||    
T  17499732 ttactttataagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaatt 17499831  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| ||| ||||||||||||||| |||||||||||||||||||    
T  17499832 aaaattgcattggaaatgtaaagcgacattcattttgaaacaa 17499874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 31941695 - 31941553
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaa----agatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||||| |||||||| |||||||||||||||||||| ||||||| |    || ||| |         |||||||||||||||| ||||||||    
T  31941695 ttactttataagaacaagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagtatttattgagggtaaagttggaagaaaaaaatt 31941596  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  31941595 aaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 31941553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 11835295 - 11835105
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||  ||| ||||||||||| |  ||||||||||||  ||||| ||| || |||||||||||| || ||| ||||||||||||||||||||    
T  11835295 agattaagaaatgaaatgaaataattattaggcataacacttttattaaactacctatagtttataagaaaa-gataaacttaaagttgcattgaaaatt 11835197  T
Q  114 gtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||||||| ||| | |          || |||||| ||| ||| |||||||||||||| ||||  |||||||||||||||||||||||||||    
T  11835196 gtgtgagagaaggttgagtatttattgaaggtaaatttgaaagaaaaaaattaaagttatattaaaaatgtaaagtgacattcattttgaaa 11835105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 47321282 - 47321138
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtg----tgagaaaagatgggg---------agggtaaagttggaaggaaaaaa-t 155  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    ||||||||| | | |         |||||||||||||||| |||||| |    
T  47321282 ttactttataagaaaaagacaaccttaaagttgcattgaaaattgtgcgagtgagaaaagttagagtatttattgagggtaaagttggaagaaaaaaaat 47321183  T
Q  156 taaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||    
T  47321182 taaagttgtattgaaaatgtaaagtgacattcattttaaaacaaa 47321138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 56556237 - 56556410
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||||||| |||| ||||   || ||||||||||||| ||| |  | || |||||||||||||| ||||| ||||  || ||||||||    
T  56556237 cacagattaaggaattgaatgaaatcatta---gacataacacttttactaaattatccttgctttataagaaaaatacaaacttaacattacattgaaa 56556333  T
Q  111 attgtgtgagaaaagatggggagggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| ||             |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  56556334 attgtgtgagagaa-------------aagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 56556410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 19282501 - 19282567
Alignment:
Q  134 ggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19282501 ggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 19282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 34096210 - 34096100
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||| ||||  ||| ||||||| ||| ||  |||||||||||| ||| |||| ||||||||||||||||||||||| |||||||| ||||||||    
T  34096210 cacaaattaaaaaatgaaatgaaataatcattagacttaacacttttactaaattgcccttactttataagaaaaagacaaacttaaagtttcattgaaa 34096111  T
Q  111 attgtgtgaga 121  Q
    |||||||||||    
T  34096110 attgtgtgaga 34096100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 31987430 - 31987306
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaat--tgtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtatt 167  Q
    |||||||||||||| |||||||||||||||||||  || | |||||||| |||          ||||||||||||||||| |||||||||||||||||||    
T  31987430 aagaaaaagacaaatttaaagttgcattgaaaattatgcgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtatt 31987331  T
Q  168 ggaaatgtaaagtgacattcatttt 192  Q
     ||||||||||||||||||||||||    
T  31987330 agaaatgtaaagtgacattcatttt 31987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 34124491 - 34124289
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||||||||||| || | |   |  |||||| |||||| ||| |  | ||||||||||||||||| ||||| ||||||||| |||||||    
T  34124491 cacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 34124392  T
Q  111 attgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    |||||||||||    |||| | | |         |||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||| ||||    
T  34124391 attgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttaaaac 34124292  T
Q  198 aaa 200  Q
    |||    
T  34124291 aaa 34124289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 45889700 - 45889559
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt----gagaaaagatgg---------ggagggtaaagttggaaggaaaaaatt 156  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||    |||||||| |||          ||||||||||| ||||| ||||| ||    
T  45889700 ttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagtaggaagaaaaaagtt 45889601  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| |||||| ||| |||||||||||||||||||    
T  45889600 aaagttgtattgaaaatgt-aagcgacattcattttgaaacaa 45889559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 51434346 - 51434414
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||| ||||||    
T  51434346 gagggtaaagtttgaaggaaaaaattaaagttgcattagaaatgtaaagcgacattcattttaaaacaa 51434414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 30492791 - 30492732
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatt 190  Q
    |||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||    
T  30492791 gagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatt 30492732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 54233953 - 54233902
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54233953 ttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgaga 54233902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 42672583 - 42672477
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||| ||||||| ||| || ||||||||||||| ||||| |   |||||||||||||||||||||| ||||||||| |||||||    
T  42672583 cacaaattaaggaatataatgaaataatcattagacataacacttttactaaactactcatactttataagaaaaagacaaatttaaagttgtattgaaa 42672484  T
Q  111 attgtgt 117  Q
    |||||||    
T  42672483 attgtgt 42672477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 45903501 - 45903559
Alignment:
Q  138 aagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||    
T  45903501 aagttggtagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 45903559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 38692516 - 38692408
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 178  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||             ||||||| || ||||||||||||||  |||| |||||||||    
T  38692516 aagaaaaagacaaaattaaagttgcattgaaaattgtgcgagagaa-------------aagttgggagaaaaaaattaaagtttaattgaaaatgtaaa 38692430  T
Q  179 gtgacattcattttgaaacaaa 200  Q
    |||||||||||||| |||||||    
T  38692429 gtgacattcattttaaaacaaa 38692408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 3093539 - 3093433
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||||||||||||||| ||| || |||||||||| |  ||| || | || |||||||||||||| | ||| |||||||||||| | |||||    
T  3093539 agattaagaaattgaataaaataatcattagacataacactttcattaaattgtccttcctttataagaaaaa-agaaatttaaagttgcatcggaaatt 3093441  T
Q  114 gtgtgaga 121  Q
    ||||||||    
T  3093440 gtgtgaga 3093433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 200
Target Start/End: Complemental strand, 6510254 - 6510112
Alignment:
Q  69 tttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaatta 157  Q
    |||||||||||| ||||||||||| ||||| || |||| ||||||||||  |||||||| ||| |         ||||||||||||  || ||||| |||    
T  6510254 tttactttataataaaaagacaaacttaaaattacattaaaaattgtgtaagagaaaaggtggagtatttattgagggtaaagttgagagaaaaaagtta 6510155  T
Q  158 aagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||||||||||| |||| |||||||||||| |||||||||||||    
T  6510154 aagttgtattgaaaatataaagtgacatttattttgaaacaaa 6510112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 38761788 - 38761898
Alignment:
Q  15 gattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattg 114  Q
    ||||||||||| |||| ||||||||| | || ||||||||||||| |||   || ||||||||| ||| ||||||| | |||||||| | ||||||||||    
T  38761788 gattaagaaatagaattaaataattaatagacataacacttttactaaatcacccttactttattagagaaagacacacttaaagttaccttgaaaattg 38761887  T
Q  115 tgtgagaaaag 125  Q
    || ||||||||    
T  38761888 tgagagaaaag 38761898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 17317950 - 17317999
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  17317950 aaaaaattaaagttgtattggaaatgtaatgtgacattcagtttgaaaca 17317999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 1868208 - 1868255
Alignment:
Q  152 aaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||    
T  1868208 aaattaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 1868255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 4408192 - 4408243
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  4408192 ttactatataagaaaaagacaaacttaaaattgcattgaaaattgtgtgaga 4408243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 6232141 - 6232192
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  6232141 aaaaaattaaagttgtattgaaaatgtaaattgacatttattttgaaacaaa 6232192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 199
Target Start/End: Original strand, 32141163 - 32141280
Alignment:
Q  78 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga--tggggagggtaaagttggaaggaaaa-aattaaagttgtattggaaatg 174  Q
    ||||||||||||||| |||||||||||||        |||||| |||||  ||| ||||||||||||||||| |||| |||||||||||||||  ||||     
T  32141163 taagaaaaagacaaacttaaagttgcatta-------tgtgaggaaagagttggagagggtaaagttggaagaaaaaaaattaaagttgtattcaaaata 32141255  T
Q  175 taaagtgacattcattttgaaacaa 199  Q
    | ||||||| |||||||||||||||    
T  32141256 tgaagtgacgttcattttgaaacaa 32141280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 51434272 - 51434323
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||    
T  51434272 ttactttataagaaaaagactaactttaagttgcattgaaaattgtgtgaga 51434323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 29289852 - 29289959
Alignment:
Q  17 ttaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaa---agacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||| |||| ||||||| ||| || |||| | |||||  |||  ||||||||||||||| ||||   ||||||| ||||| ||||||||||||||    
T  29289852 ttaagaaatggaatgaaataatcattagacataatatttttaataaatcgcctttactttataaaaaaaaaaagacaaacttaaaattgcattgaaaatt 29289951  T
Q  114 gtgtgaga 121  Q
    ||||||||    
T  29289952 gtgtgaga 29289959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 44835398 - 44835341
Alignment:
Q  131 gagggtaaagtt-ggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattc 187  Q
    |||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||    
T  44835398 gagggtaaagtttggaagaaaaaaattaaagttgtattcgaaatgtaaagtgatattc 44835341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 54233900 - 54233844
Alignment:
Q  139 agttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||    
T  54233900 agttggaag-aaaaaattaaagttgtattgaaaatgtaaagcggcattcattttgaaa 54233844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 54092021 - 54091953
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||  || |||||||||||||||||||  |||| |||| ||||||||||||| ||||||    
T  54092021 gagggtaaagttgagagaaaaaaattaaagttgtattaaaaatctaaattgacattcattttaaaacaa 54091953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 278 - 317
Target Start/End: Complemental strand, 31514749 - 31514710
Alignment:
Q  278 gttgtaaaatgacatttaatgtcactttaattaataataa 317  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  31514749 gttgtaaaatgacatttaatgtcactttaatcaataataa 31514710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 6231702 - 6231652
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| |  |||| |||||||||||||||||||||||||    
T  6231702 aaaaaattaaagttgtactataaatataaagtgacattcattttgaaacaa 6231652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 29289982 - 29290040
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||||||||| |||| |||||||| ||||||||||| |||| |||||||||||| |||||    
T  29289982 ggtaaagtttgaagaaaaaaattgaagttgtattgaaaatataaagtgacattaatttt 29290040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 34534111 - 34534157
Alignment:
Q  74 tttataagaaaaagacaaaattaaa-gttgcattgaaaattgtgtga 119  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  34534111 tttataagaaaaagacaaacttaaaagttgcattgaaaattgtgtga 34534157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 4408286 - 4408335
Alignment:
Q  150 aaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||||    
T  4408286 aaaaattaaagttgcattgagaatgtaaagcgacattcattttgaaacaa 4408335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 6462151 - 6462102
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtga 119  Q
    |||||||||||||| || ||||| |||||||||||||||| |||||||||    
T  6462151 ttactttataagaacaaaacaaacttaaagttgcattgaatattgtgtga 6462102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 34096079 - 34096010
Alignment:
Q  131 gagggtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| ||  |||||| ||||| ||||||| |||||||||| |||||||| |||||||||||    
T  34096079 gagggtaaagttgaaaaaaaaaaaattaaaattgtattagaaatgtaaattgacattcgttttgaaacaa 34096010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 55126559 - 55126494
Alignment:
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    |||||| |||| ||||  ||||||||||||||||||| |||| |||| ||||||||||||| ||||    
T  55126559 agggtagagttagaagagaaaaattaaagttgtattgaaaatttaaaatgacattcattttaaaac 55126494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 4505358 - 4505293
Alignment:
Q  176 aaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||||    
T  4505358 aaagtgacattcattttgaaacaatttttttttgctaaagcgacactcattttgaaacggagggag 4505293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 28116382 - 28116334
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtg 118  Q
    |||||||||||||| |||||||| |||||||| || |||||||||||||    
T  28116382 ttactttataagaataagacaaacttaaagttacactgaaaattgtgtg 28116334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 45903377 - 45903441
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttat 78  Q
    |||||||||||| |||| ||||||| |||||||||||| ||||||  |||||||  |||||||||    
T  45903377 agattaagaaatagaatgaaataatcattggatataacgcttttattaaactgctcttactttat 45903441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 55548313 - 55548380
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||| ||||||||||  || |||||||||||| |||| ||||||||||||||| | ||||||||||||    
T  55548313 gagggcaaagttggaaa-aagaaattaaagttgcattgaaaatgtaaagtgacacttattttgaaacaa 55548380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 34360012 - 34359977
Alignment:
Q  208 agctaaagtgacactcattttgaaacggagggagca 243  Q
    ||||||||||||||||||||||||||||||| ||||    
T  34360012 agctaaagtgacactcattttgaaacggaggaagca 34359977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 55126634 - 55126587
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt 117  Q
    |||||||||||||| |||||||| |||||||||||  |||||||||||    
T  55126634 ttactttataagaataagacaaacttaaagttgcaaggaaaattgtgt 55126587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 17317805 - 17317910
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||| ||||  ||||||||||| ||| || ||  | ||||||| ||||| |  |||||||||||||||| |||||| ||     ||||||||||    
T  17317805 cacagattaaaaaataaaataaaataatcattagacattgctcttttactaaactacgcttactttataagaaaaggacaaattt-----tgcattgaaa 17317899  T
Q  111 attgtgtgaga 121  Q
    |||||||||||    
T  17317900 attgtgtgaga 17317910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 51737280 - 51737367
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagt 100  Q
    |||| |||||| ||| |||| ||||||| ||| || ||||||||||||| ||| | || |||||||||  |||||||||||| |||||||    
T  51737280 cacaaattaaggaatagaatgaaataataattagacataacacttttactaaattacccttactttat--gaaaaagacaaacttaaagt 51737367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 31941760 - 31941792
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  31941760 gctaaagcgacactcattttgaaacggagggag 31941792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 39985024 - 39985056
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  39985024 gctaaagcgacactcattttgaaacggagggag 39985056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 56373525 - 56373493
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||||||||||| ||||    
T  56373525 gctaaagtgacactcattttgaaacggatggag 56373493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 8e-72; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 11 - 234
Target Start/End: Original strand, 26965463 - 26965688
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||  ||| ||||||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26965463 cacagattaagaaataaaatgaaataatcattggatataacgcttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 26965562  T
Q  111 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnna 208  Q
    |||||||  |||||||| ||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||             
T  26965563 attgtgtgagagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaatattttttg 26965662  T
Q  209 gctaaagtgacactcattttgaaacg 234  Q
    |||||||||||||||||||| |||||    
T  26965663 gctaaagtgacactcattttaaaacg 26965688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 27483148 - 27483337
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||| ||||||| ||| || ||||||||||||| ||| | || ||||||||||||||||||||||| |||||||||||||||||    
T  27483148 cacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaatttcccttactttataagaaaaagacaaacttaaagttgcattgaaa 27483247  T
Q  111 attgtgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||| |||||||  |||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27483248 attatgtgagagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 27483337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 241
Target Start/End: Original strand, 37225553 - 37225791
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||  ||| ||||||| ||||||||||| |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  37225553 agattaagaaatacaatgaaataatcattggatataatacttttactaaactgtccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 37225652  T
Q  114 gtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaann 202  Q
    ||||  |||||||| | |          ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||       
T  37225653 gtgtgagagaaaagttagcgtatttattgagggtaaagttggaagaaaagaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaattt 37225752  T
Q  203 nnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
         |||||||  |||||||||||| ||||||||||||    
T  37225753 tttttagctaaaacgacactcattttaaaacggagggag 37225791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 2567970 - 2568157
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||| |||||||| ||||||| ||| |||||||||||||||| ||| || | ||||||||||||||||||||||| ||||||||||||||||||||    
T  2567970 agattaaggaattgaatgaaataatcattagatataacacttttacaaaaatgtccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 2568069  T
Q  114 gtgtgagaaaaga--tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||| || |  | |  |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  2568070 gtgtgagagaaaaattagaaagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaacaa 2568157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 34060063 - 34059832
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| |||| ||||||| |||||||||||   |||||| ||||| || ||||||||||||||||||||||  |||||||||||||||||    
T  34060063 cacagattaagaaatggaatgaaataataattggatataaagtttttactaaactacccttactttataagaaaaagacaa--ttaaagttgcattgaaa 34059966  T
Q  111 attgtgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnna 208  Q
    |||||| ||||  |||| ||| ||||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||| |||||||            
T  34059965 attgtgcgagagaaaagttggagagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttaaaacaaatttttttt 34059866  T
Q  209 g-ctaaagtgacactcattttgaaacggagggag 241  Q
    | ||||||||||||||||||| ||||| ||||||    
T  34059865 gactaaagtgacactcattttaaaacgtagggag 34059832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 1340887 - 1341067
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||  ||| |||| ||||||| ||| || ||||||||||| | ||| || ||||||||||||||||||||||||| ||||||||||||||||||||    
T  1340887 agattaaagaatggaatgaaataataattagacataacactttttctaaagtgtctttactttataagaaaaagacaaacttaaagttgcattgaaaatt 1340986  T
Q  114 gtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||||  |||||||| ||| |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  1340987 gtgtgagagaaaagttggagagggtaacgttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 1341067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 44648365 - 44648597
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaa-gacaaaattaaagttgcattgaa 109  Q
    ||||||||||| |||  ||| ||||||| ||| || ||||||||||||| |||||||||||||||||| ||||||| |||||| ||||||||| ||||||    
T  44648365 cacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgcctttactttatgagaaaaaagacaaacttaaagttgaattgaa 44648464  T
Q  110 aattgtgtgagaaaaga--tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnn 207  Q
    ||||||||||||||| |  ||| ||| ||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||| ||||||            
T  44648465 aattgtgtgagaaaaaagttggagagagtaaagttggaaaaaaaaaat-aaagttgtattggaaatgtaaagtgacattcattttaaaacaatttttttt 44648563  T
Q  208 agctaaagtgacactcattttgaaacggagggag 241  Q
     ||||||  |||||||||||||||||||||||||    
T  44648564 tgctaaaacgacactcattttgaaacggagggag 44648597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 36771531 - 36771722
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||| ||||||||||| || |||| | |||||| |||||||  ||| ||||||||||||||||||| |||||||||||||||||    
T  36771531 cacatattaagaaatataatgaaataattattagacataatatttttactaaactgctcttattttataagaaaaagacaaacttaaagttgcattgaaa 36771630  T
Q  111 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||  |||||||| ||| |||| |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  36771631 attgtgtgagagaaaagttggagaggataaagttgaaagtaaaaaattaaagttgtattgtaaatgtaaagtgacattcattttaaaacaaa 36771722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 19552730 - 19552538
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacactttt-accaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| ||||||||||  ||| ||||||| ||||||||||||  |||| || |||||| | ||||||||||||||||| ||||||||||||||||||||||    
T  19552730 cacaaattaagaaatgaaatgaaataatcattggatataacgttttttactaaactgtccttactttataagaaaaatacaaaattaaagttgcattgaa 19552631  T
Q  110 aattgtgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||| |||||||  |||| | | ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
T  19552630 aattctgtgagagaaaagttagagagggtaaagttggaagaaaaaatttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaaa 19552538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 25061891 - 25061662
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||| ||||||| ||| || ||||||||||||| ||||| || |||||||||||||||||  |||| |||||||||||||||||    
T  25061891 cacatattaaggaatgaaatgaaataatcattagacataacacttttactaaactacccttactttataagaaaaa--caaacttaaagttgcattgaaa 25061794  T
Q  111 attgtgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnna 208  Q
    ||||| |||||  |||| ||| ||| |||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| |||| ||            
T  25061793 attgtatgagagaaaagttggagagagtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtggcattcattttaaaac-aatttttttg 25061695  T
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||||||||||| ||||    
T  25061694 gctaaagtgacactcattttgaaacggaaggag 25061662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 647547 - 647787
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||  ||| ||||||| ||| ||||||||| |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  647547 cacagattaagaaatgaaatgaaataatcattagatataacagttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaa 647646  T
Q  111 attgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||  |||||||| | |          ||||||||||||||||| |||||||||||||||||||| ||||||||| ||| | ||||||| ||||||    
T  647647 attctgtaagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaaatgata-tcatttttaaacaa 647745  T
Q  200 annnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |        | |||||||||||||||||||||||||||||||    
T  647746 atttttttggttaaagtgacactcattttgaaacggagggag 647787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 790270 - 790053
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||| ||||||| |||| ||||||| ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| ||    
T  790270 cacatattaagaaatgtaatgaaataatcattgaatataacgcttttactaaactgcccttactttataagaaaaagtcaaaattaaagttgcattggaa 790171  T
Q  111 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagc 210  Q
    |||||||||||             | |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||        |     
T  790170 attgtgtgaga-------------gaaaagtttgaagaaaaaaattaaagttgtattggaaatgtaaagtgacattaattttgaaacaaatttttttggt 790084  T
Q  211 taaagtgacactcattttgaaacggagggag 241  Q
    ||||| |||||||||||||||||||| ||||    
T  790083 taaagggacactcattttgaaacggacggag 790053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 31290929 - 31291111
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||| ||||||||||| || ||||||||||||| |||||||||||| ||||| ||||||||| ||| ||||||||||| |||||    
T  31290929 cacagattaaggaatgaaatgaaataattattagacataacacttttactaaactgcctttattttattagaaaaaga-aaacttaaagttgcaatgaaa 31291027  T
Q  111 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||  |||||||| ||  |||  |||||||| ||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  31291028 attgtgtgagagaaaagttgaagagcataaagttgaaagaaaaaaattaaagttgtattagaaatgtaaagtgatattcatttt 31291111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 40049067 - 40048900
Alignment:
Q  16 attaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 115  Q
    |||||| ||| |||| ||||||| ||| || ||||||||||||  ||| |||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  40049067 attaaggaatggaatgaaataatcattagacataacacttttattaaattgcctttactttataagaaaaagacaaatttaaagttgcattgaaaattat 40048968  T
Q  116 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattt 191  Q
    | |||||||| ||| |||||||||| |||||| ||||||||||        |||||||||||||||||||||||||    
T  40048967 gagagaaaagttggagagggtaaagctggaagaaaaaaattaa--------tggaaatgtaaagtgacattcattt 40048900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 38457658 - 38457460
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||||||| ||||||| |||  | ||||||||||||| |||||||| ||||||||| ||||||||| ||| ||||| |||||||||||    
T  38457658 cacaaattaagaaattgaatgaaataatcattacacataacacttttactaaactgccattactttattagaaaaagataaacttaaaattgcattgaaa 38457559  T
Q  111 attgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||||||  |||||||| |||          ||||||||||||||| | |||||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  38457558 attgtgtgagagaaaagttggagtatttattgagggtaaagttggatgaaaaaaattaaagttgtattgaaaatgtaaaatgatattcattttgaaaca 38457460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 46362965 - 46363165
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||||||| ||||||| ||| ||  ||||| |||||| |||||| | ||||||||||||||||| ||||| |||||||||||||| ||    
T  46362965 cacatattaaggaattgaatgaaataatcattagacctaacatttttactaaactgtccttactttataagaaaaatacaaatttaaagttgcattgtaa 46363064  T
Q  111 attgtgt--gagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||||||  |||||||| |||          |||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46363065 attgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaaca 46363164  T
Q  199 a 199  Q
    |    
T  46363165 a 46363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 35239556 - 35239390
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||| ||||||||||||||||| ||| |  |||||| |||||| |||||| | ||||||||||||||||||||||| ||||||||||| ||||||||    
T  35239556 agattaaaaaattgaataaaataatcattaggcataacatttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcagtgaaaatt 35239457  T
Q  114 gtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
    ||||||||             | |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  35239456 gtgtgaga-------------gaaaagttggaa-gaaaaaattaaagttgtattagaaatgtaaagtgacattcattttga 35239390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 53716196 - 53716029
Alignment:
Q  16 attaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 115  Q
    ||||||||||  ||| ||||||| |||||||||||| ||||||| |||||||  ||||||||||||||||||||  |||||||||||||||||||| |||    
T  53716196 attaagaaatgaaatgaaataatcattggatataacgcttttactaaactgctcttactttataagaaaaagac--aattaaagttgcattgaaaactgt 53716099  T
Q  116 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||||             | ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  53716098 gtgaga-------------gaaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtaacattcattttaaaaca 53716029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 43580677 - 43580435
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataa--gaaaaagacaaaattaaagttgcattga 108  Q
    ||||||||||| ||| |||| ||||||| |||  |||||||| |||||| |||||||| ||  ||||||   |||||||||||| |||||||||||||||    
T  43580677 cacagattaaggaatagaatgaaataatcattacatataacatttttactaaactgcccttgttttatatatgaaaaagacaaatttaaagttgcattga 43580578  T
Q  109 aaattgtgtgag---aaaagatgggg---------agggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 195  Q
    ||||||||||||   ||||| ||| |         ||||||||||||||||  |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  43580577 aaattgtgtgagaaaaaaagttggagtatttattaagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacatttattttgaa 43580478  T
Q  196 acaaannnnnnnagctaaagtgacactcattttgaaacggagg 238  Q
    |||||        ||||||| ||| ||||||||||||||||||    
T  43580477 acaaatttttttggctaaagcgacgctcattttgaaacggagg 43580435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 49 - 199
Target Start/End: Complemental strand, 83455 - 83295
Alignment:
Q  49 aacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatgggg---------agggta 137  Q
    ||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||||||  |||| | | |         ||||||    
T  83455 aacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgcgtgagagaaaagttagagtatttaatgagggta 83356  T
Q  138 aagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  83355 aagttggaag-aaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 83295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 54933217 - 54933359
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||    |||| ||| |         |||||||||||||||| ||||||||    
T  54933217 ttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaatt 54933316  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  54933317 aaagttgcattggaaatgtaaagtgacattcattttgaaacaa 54933359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 70 - 241
Target Start/End: Original strand, 25722473 - 25722657
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||||||||||    |||| ||| |         ||||||||||  |||| ||||||||    
T  25722473 ttactttacaagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatttagggtaaagtatgaagaaaaaaatt 25722572  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||| ||||||||||||||||||||||||||| ||         ||||||| |||||||||||||||||||||||||    
T  25722573 aaagttgtattgaaaatgtaaagtgacattcattttgaaataattttttttggctaaagcgacactcattttgaaacggagggag 25722657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 81 - 200
Target Start/End: Original strand, 43599855 - 43599976
Alignment:
Q  81 gaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 178  Q
    |||||||||||| ||||||||||||| ||||||||||||||  |||| ||| ||||||||||||  ||| ||||||||||||||||||   |||||||||    
T  43599855 gaaaaagacaaacttaaagttgcattaaaaattgtgtgagagaaaagttggagagggtaaagttaaaagaaaaaaattaaagttgtatgaaaaatgtaaa 43599954  T
Q  179 gtgacattcattttgaaacaaa 200  Q
      ||||||||||||||||||||    
T  43599955 acgacattcattttgaaacaaa 43599976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 31 - 237
Target Start/End: Complemental strand, 41287256 - 41287037
Alignment:
Q  31 aaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaa------ 124  Q
    |||||||| ||| || ||||||||||||| |||||||  ||| |||||| ||||||  |||| |||||||||||||||||||||||||||||||          
T  41287256 aaaataatcattagacataacacttttactaaactgcacttattttatatgaaaaactcaaacttaaagttgcattgaaaattgtgtgagaaaatggttt 41287157  T
Q  125 ga-----tggggagggtaaagttggaag--gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtg 217  Q
    ||     |   ||||| |||||||||||   ||||||||||||||||||||||||||||||||||||| |||||| ||| ||        |||||||| |    
T  41287156 gagtatttattgagggaaaagttggaagaaaaaaaaattaaagttgtattggaaatgtaaagtgacatccattttaaaataattttttttagctaaagcg 41287057  T
Q  218 acactcattttgaaacggag 237  Q
    ||||||||||||||||||||    
T  41287056 acactcattttgaaacggag 41287037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 49 - 199
Target Start/End: Complemental strand, 44854475 - 44854314
Alignment:
Q  49 aacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattg---tgtgagaaaagatgg---------ggagggt 136  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||   || |||||||| |||          ||||||    
T  44854475 aacacttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattgaaaattgtactgagagaaaagttggagtatttattgagggt 44854376  T
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||||| |||||| ||||| |||||||| |||||||||||||| |||||||||||||||    
T  44854375 aaaattggaa-gaaaaagttaaaattgtattgaaaatgtaaagtgacgttcattttgaaacaa 44854314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 2662446 - 2662557
Alignment:
Q  10 gcacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||||||||||  |||  ||| ||||||| ||| || ||||||||||||| ||| |||| ||| ||||||||||||||||||| ||||||||||||||||    
T  2662446 gcacagattaaagaatcaaatgaaataatcattagacataacacttttactaaattgcccttattttataagaaaaagacaaatttaaagttgcattgaa 2662545  T
Q  110 aattgtgtgaga 121  Q
    ||||||||||||    
T  2662546 aattgtgtgaga 2662557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 13485909 - 13486001
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||| |||||||    
T  13485909 aaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaacaaattgtttttgctaaagtgacactcattttgaaactgagggag 13486001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 2988622 - 2988763
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||| ||||    |||| | | |         |||||||||||||||| ||||||||    
T  2988622 ttactttataagaacaagacaaacttaaagttgcattgaaaattgtgcgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaatt 2988721  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  2988722 aaa-ttgtattggaaatgtaaagtgacattcattttgaaacaa 2988763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 54261615 - 54261372
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||||||||||| || | |   |  |||||| |||||| ||| |  | ||||||||||||||||| ||||| ||||||||| |||||||    
T  54261615 cacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 54261516  T
Q  111 attgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    |||||||||||    |||| | | |         |||||||||||||||| ||||||||||||||| |||| |||||||||| ||| |||||||||||||    
T  54261515 attgtgtgagagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacgttcattttgaaac 54261416  T
Q  198 aaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||         ||||||  |||||||||||||||||||||||||    
T  54261415 aattttttttggctaaaacgacactcattttgaaacggagggag 54261372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 70 - 241
Target Start/End: Complemental strand, 43169475 - 43169291
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag----aaaagatgg---------ggagggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||||| |||||||| ||||||||| |||||||||||||||||    ||||| | |          || ||||||||| |||| ||||||||    
T  43169475 ttactttataagaataagacaaacttaaagttgtattgaaaattgtgtgagagataaaagtttgagtatttattgaaggtaaagttagaagaaaaaaatt 43169376  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||||| ||||||||||||||||||||          |||||| |||||||||||| ||||||||||||    
T  43169375 aaagttgtattggaaatgtaaaatgacattcattttgaaacaattttttttgactaaagcgacactcattttaaaacggagggag 43169291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 43600152 - 43600341
Alignment:
Q  18 taagaaattgaataaaataattattggatataacacttttaccaaac-tgcctttactttataagaaaaa-gacaaaattaaagttgcattgaaaattgt 115  Q
    ||||||||  ||||||||||||||| ||||||||| |||||| |||| | |||||||||||||| ||||| |||||| ||||||||  |||| |||||||    
T  43600152 taagaaatgaaataaaataattattagatataacatttttactaaacttccctttactttataaaaaaaatgacaaatttaaagttatattggaaattgt 43600251  T
Q  116 gt--gagaaaagatggg--------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||  ||||||||  | |        |||||||||||||||| |||||||||||| |||||||| ||||||||||| ||||| |||||||||    
T  43600252 gtgagagaaaagtagagtatttattgagggtaaagttggaa-gaaaaaattaaaattgtattgaaaatgtaaagtaacatttattttgaaa 43600341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 70 - 240
Target Start/End: Original strand, 43687895 - 43688081
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaa---a 153  Q
    |||||||||||||| |||||||| |||||||| |||||||||||||||||||    |||| ||| |         |||||||||||||||| ||||   |    
T  43687895 ttactttataagaacaagacaaatttaaagtttcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaaa 43687994  T
Q  154 attaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggaggga 240  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||         ||||||  ||||||||||||||||||||||||    
T  43687995 attaaagttgtattggaaatgtaaagtgacatttattttggaacaatttttttttgctaaaacgacactcattttgaaacggaggga 43688081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 32303991 - 32304060
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  32303991 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttcaaaacaaa 32304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 22414948 - 22414757
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||  ||| ||||||||||| || |||| |||||||  ||||| ||| || |||||||| |||||| ||| ||||||||||||||||||||    
T  22414948 agattaagaaatgaaatgaaataattattagacataatacttttattaaactacctatagtttataag-aaaagagaaacttaaagttgcattgaaaatt 22414850  T
Q  114 gtgtgagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||| ||| ||| | |          || ||||||||||||||  |||||||||||||| ||||  |||||||||||||||||||||||||||    
T  22414849 gtgtaagagaaggttgagtatttattgaaggtaaagttggaagaaaaaaaattaaagttatattaaaaatgtaaagtgacattcattttgaaa 22414757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 45095636 - 45095559
Alignment:
Q  113 tgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||| |||||||| ||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  45095636 tgtgagagaaaagttggagagggtaaagttggaa--aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 45095559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 20512449 - 20512692
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||||||||||||| | |   |  ||| || |||||| ||| |  | ||||||||||||||||| ||||| ||||||||| |||||||    
T  20512449 cacagattaagaaattgaataaaatagtcaaatgtcatagcaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 20512548  T
Q  111 attgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt-aaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||||||||||    |||| ||| |         | |||||||||||||| |||||||| ||||||| |||| |||||||||| ||||||||||||||||    
T  20512549 attgtgtgagagagaaaagttggagtatttattgaaggtaaagttggaagaaaaaaatttaaagttgcattgaaaatgtaaagcgacattcattttgaaa 20512648  T
Q  197 caaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    | ||        ||||||  |||||||||||||||||||||||||    
T  20512649 c-aatttttttggctaaaacgacactcattttgaaacggagggag 20512692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 36541558 - 36541447
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttg-aaacaaannnnnnnagctaaagtgacactcattttg 229  Q
    ||||||||||||||||| || ||| ||||||||||||| |||||||||  ||||||||||||| |||||||       | |||||| |||||||||||||    
T  36541558 gagggtaaagttggaagaaataaagtaaagttgtattgaaaatgtaaaacgacattcattttgaaaacaaatttctttaactaaagcgacactcattttg 36541459  T
Q  230 aaacggagggag 241  Q
    ||||||||||||    
T  36541458 aaacggagggag 36541447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 38165617 - 38165783
Alignment:
Q  12 acagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcat----tg 107  Q
    |||||||||| |||  ||| ||||||| |||  | ||||||||||||| |||||| | ||||||||||||||||||||||| ||||||||||||    ||    
T  38165617 acagattaaggaatgtaatgaaataatcattaaacataacacttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcattggatg 38165716  T
Q  108 aaaattgtgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacatt 186  Q
     |||||||||||||             | |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  38165717 gaaattgtgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacatt 38165783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 44645479 - 44645340
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt----gagaaaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    |||||||||| |||||||| ||| |||||||||||||||||||| |||    |||||||| ||| |         |||||||||||||||| ||||||||    
T  44645479 ttactttatatgaaaaagataaacttaaagttgcattgaaaattatgtaagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaatt 44645380  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||| || |||||||||||| ||||||||||||||||    
T  44645379 aaagttgcatgggaaatgtaaagcgacattcattttgaaa 44645340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 51381865 - 51381720
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga-----aaagatggg----------gagggtaaagttggaaggaaaaaa 154  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||     ||| || ||          |||||||||||| |||| ||||||    
T  51381865 ttactttataataaaaagacaaacttaaagttgcattgaaaattgtgtgagagagagaaaaattggagtatttatcgagggtaaagttagaagaaaaaaa 51381766  T
Q  155 -ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
     |||||||||||||| ||||||||||||||||| ||||||||||||    
T  51381765 attaaagttgtattgtaaatgtaaagtgacatttattttgaaacaa 51381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 22730989 - 22730924
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  22730989 ggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 22730924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 82 - 199
Target Start/End: Complemental strand, 27027860 - 27027732
Alignment:
Q  82 aaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattgga 170  Q
    ||||||||||| ||||||||||||||||||||||||||||  |||| ||| |         ||| ||||||| |||| ||||||||||| ||||||||||    
T  27027860 aaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattaaggataaagtttgaagaaaaaaattaaatttgtattgga 27027761  T
Q  171 aatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||| ||||||| ||||||||||||    
T  27027760 aatgtaaattgacattaattttgaaacaa 27027732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 16 - 240
Target Start/End: Complemental strand, 4392088 - 4391862
Alignment:
Q  16 attaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 115  Q
    ||||||||||  ||| ||||||||||| || ||||||||||||| ||||||||          |||||||||||||| ||||||||||||||||||||||    
T  4392088 attaagaaatgaaatgaaataattattagacataacacttttactaaactgccc---------aagaaaaagacaaacttaaagttgcattgaaaattgt 4391998  T
Q  116 gtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnn 204  Q
    | ||||  |||| ||| |         ||||||||||||| || ||||||||||| ||||| |  ||||||||||||| ||||||||| |||||||        
T  4391997 gcgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaaattgtactaaaaatgtaaagtgatattcattttaaaacaaatttt 4391898  T
Q  205 nnnagctaaagtgacactcattttgaaacggaggga 240  Q
        |||||||||||| ||| | |||||||||||||    
T  4391897 tttggctaaagtgacattcagtatgaaacggaggga 4391862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 9167680 - 9167810
Alignment:
Q  47 ataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaa 146  Q
    |||||| |||||| |||||||| ||||||||| | ||||| | ||| ||||| ||||||||||||| |||  ||||||| ||  || |||||||| ||||    
T  9167680 ataacatttttactaaactgcccttactttattaaaaaaaaa-aaacttaaaattgcattgaaaatcgtgaaagaaaagttgaagatggtaaagtaggaa 9167778  T
Q  147 ggaaaaaattaaagttgtattggaaatgtaaa 178  Q
    | |||||||||||||||||||| |||| ||||    
T  9167779 gaaaaaaattaaagttgtattgaaaatataaa 9167810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 42740383 - 42740238
Alignment:
Q  48 taacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag--aaaagatggggagggtaaagttgga 145  Q
    |||||||||||| || ||||| ||| ||||||| ||||  | ||  |||||||||||||||||||||||||||  ||||| || ||| |||||| |||||    
T  42740383 taacacttttactaa-ctgcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaagttgaggaaggtaaaattgga 42740285  T
Q  146 aggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    || |||||||||||||  ||||  |||| |||||||||||| |||||    
T  42740284 agaaaaaaattaaagtgatattaaaaatataaagtgacatttatttt 42740238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 5244782 - 5244673
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||||||| ||||||| ||| || ||||||||||||  ||| |  |||||||| |||||||||| ||||| |||||||||||||||||    
T  5244782 cacatattaagaaattgaatgaaataatcattagacataacacttttattaaagtctctttactt-ataagaaaaaaacaaacttaaagttgcattgaaa 5244684  T
Q  111 attgtgtgaga 121  Q
    ||  |||||||    
T  5244683 ataatgtgaga 5244673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 3000883 - 3000751
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaa-ttaaagttgtat 166  Q
    |||||||||||||| ||||||||||||||||||||||||||||  |||| ||| |         |||||| |||||| || |||||| ||||||||||||    
T  3000883 aagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattgagggtagagttgggagaaaaaaaattaaagttgtat 3000784  T
Q  167 tggaaatgtaaagtgacattcattttgaaacaa 199  Q
    || ||||||||||| ||||||||||| ||||||    
T  3000783 tgaaaatgtaaagtaacattcattttaaaacaa 3000751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 27039492 - 27039415
Alignment:
Q  45 atataacacttttaccaaactgcctttactttataagaaaaa-gacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||||||||||||| ||| || | ||||||||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  27039492 atataacacttttactaaagtgtccttactttataaaaaaaaagacaaatttaaagttgcattgaaaattgtgtgaga 27039415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 35099453 - 35099518
Alignment:
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  35099453 agggtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaaatgacatttattatgaaac 35099518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 36310339 - 36310404
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| || |||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  36310339 ggtaaagttgggagaaaaaaaataaagttgtattggaaatgtaaaatgacatttattttgaaacaa 36310404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 4476398 - 4476498
Alignment:
Q  94 ttaaagttgcattgaaaattgtgtgag--aaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattt 191  Q
    |||||||||||||||||||||||||||  ||||| || ||| |||||| ||| ||| ||||||||||| |  ||||  ||||||||||||||||| ||||    
T  4476398 ttaaagttgcattgaaaattgtgtgagaaaaaagttgaggaaggtaaaattgaaagaaaaaaattaaaatgatattaaaaatgtaaagtgacatttattt 4476497  T
Q  192 t 192  Q
    |    
T  4476498 t 4476498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 42857148 - 42857212
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||||||| |||| |||||||||| ||||||| |||||||||||||||||||| |||| |||||    
T  42857148 ggtaaagttagaagaaaaaaattaatgttgtatgggaaatgtaaagtgacattccttttaaaaca 42857212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 52222831 - 52222892
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||||||    
T  52222831 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatg--aaacgacattcattttga 52222892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 49470851 - 49470788
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||| ||||| | |||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  49470851 taaatttggatgaaaaaaattaaagttgtattgaaaatgtaaaacgacattcattttgaaacaa 49470788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 53560805 - 53560754
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||||||||||||||||||||  |||||||||||||||||||| |||||||    
T  53560805 ttactttataagaaaaagacaatcttaaagttgcattgaaaattatgtgaga 53560754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 15514830 - 15514872
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattt 191  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  15514830 aaaaaattaaagttgtattggaaatgtaaagtgacatttattt 15514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 52202383 - 52202445
Alignment:
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| |||||||||||||||||||| ||||| |||  |||||||||||| ||||||    
T  52202383 aaagttggaagaaaaaaattaaagttgtattgaaaatgcaaaacgacattcattttaaaacaa 52202445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 43736846 - 43736922
Alignment:
Q  32 aaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    ||||||| ||| |||||||||||||||| ||||| |  ||| ||||||||||||||| ||| ||||||||||||||||    
T  43736846 aaataatcattagatataacacttttactaaactactcttattttataagaaaaaga-aaacttaaagttgcattgaa 43736922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 42791388 - 42791284
Alignment:
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnag-ctaaagtgacactcattttgaaacgg 235  Q
    ||||||||||| ||||||||||||||||| ||  ||| |||||||||||| ||||||||| ||         | ||||||||||||||||||||||||||    
T  42791388 aaagttggaagaaaaaaattaaagttgtactgataat-taaagtgacattgattttgaaataatttttttttggctaaagtgacactcattttgaaacgg 42791290  T
Q  236 agggag 241  Q
    ||||||    
T  42791289 agggag 42791284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 50420321 - 50420258
Alignment:
Q  135 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| |||||||||||||||||||  ||||||||| ||||||| ||||| ||||||    
T  50420321 gtaaagttggaag-aaaaaattaaagttgtattaaaaatgtaaaatgacatttatttttaaacaa 50420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 53560726 - 53560663
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||| ||||||||||||||| |||| |||||||||  |||||| |||||||||||||    
T  53560726 taaagttggaag-aaaaaattaaagttgcattgtaaatgtaaaacgacatttattttgaaacaaa 53560663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 16240706 - 16240664
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  16240706 aagaaaaagacaaacttaaagttgcattgaaaattgtgcgaga 16240664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 5244652 - 5244584
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||||   |||||||||||||| ||||  |||||||| |||||||||||||| |||||||    
T  5244652 gagggtaaagttggata-aaaaaattaaagttatattaaaaatgtaaggtgacattcattttaaaacaaa 5244584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 42007078 - 42007119
Alignment:
Q  74 tttataagaaaaagacaaaattaaagttgcattgaaaattgt 115  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  42007078 tttataagaacaagacaaacttaaagttgcattgaaaattgt 42007119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 2458215 - 2458247
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||||||||||||||||    
T  2458215 gctaaagtgacactcattttgaaacggagggag 2458247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 36541629 - 36541581
Alignment:
Q  73 ctttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||||| ||| |||||||| |||||||||||| |||||||||||||||    
T  36541629 ctttataggaacaagacaaacttaaagttgcatcgaaaattgtgtgaga 36541581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 317
Target Start/End: Complemental strand, 2587022 - 2586983
Alignment:
Q  278 gttgtaaaatgacatttaatgtcactttaattaataataa 317  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  2587022 gttgtaaaataacaattaatgtcactttaattaataataa 2586983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 22731126 - 22731040
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagtt 101  Q
    ||||||||||||  ||| ||||||| |||  | |||||| |||||| |||||||||  | ||||||||||||||||||| ||||||||    
T  22731126 agattaagaaatataatgaaataatcattaaacataacatttttactaaactgcctcaa-tttataagaaaaagacaaacttaaagtt 22731040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 32303917 - 32303964
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt 117  Q
    |||||||||||||||||| |||| |||||| || ||||||||||||||    
T  32303917 ttactttataagaaaaaggcaaacttaaagctgtattgaaaattgtgt 32303964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 35099389 - 35099426
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtg 116  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  35099389 aagaaaaagacaaacttaaaattgcattgaaaattgtg 35099426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 2586954 - 2586918
Alignment:
Q  281 gtaaaatgacatttaatgtcactttaattaataataa 317  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  2586954 gtaaaataacaattaatgtcactttaattaataataa 2586918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 41287439 - 41287407
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  41287439 gctaaagcgacactcattttgaaacggagggag 41287407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 42886738 - 42886706
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  42886738 gctaaagcgacactcattttgaaacggagggag 42886706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 51398217 - 51398249
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  51398217 gctaaagcgacactcattttgaaacggagggag 51398249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 54261624 - 54261656
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  54261624 gctaaagcgacactcattttgaaacggagggag 54261656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 2e-60; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 29795156 - 29795386
Alignment:
Q  13 cagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaat 112  Q
    ||||||||  ||| |||| ||||||| ||| || |||| |||||||| |||||||| ||| ||||||||||||||||||  |||||||||||||||||||    
T  29795156 cagattaatgaatggaatgaaataatcattagacataatacttttactaaactgcccttattttataagaaaaagacaactttaaagttgcattgaaaat 29795255  T
Q  113 tgtgtga--gaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagc 210  Q
    |||||||  |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||        ||    
T  29795256 tgtgtgaaagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaatatttttggc 29795355  T
Q  211 taaagtgacactcattttgaaacggagggag 241  Q
    |||||||||| ||||||| ||||||| ||||    
T  29795356 taaagtgacattcattttaaaacggatggag 29795386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 40410640 - 40410473
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| |||| | ||||| |||||||||||| ||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40410640 cacagattaagaaatggaatgacataatcattggatataacgcttttattaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 40410541  T
Q  111 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgta 176  Q
    |||||||  |||||||| ||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  40410540 attgtgtcagagaaaagttggagagggtaaagttgggagaaaaaaattaaagttgtattggaaatgta 40410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 40987237 - 40987418
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||| ||||||| ||| || ||||||||||||| ||| || | ||||||||||||||||||| ||| |||||||||||||||||    
T  40987237 cacatattaaggaatgaaatgaaataatcattagacataacacttttactaaattgtccttactttataagaaaaagataaatttaaagttgcattgaaa 40987336  T
Q  111 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||| |||||||| ||| ||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  40987337 attgtgagagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcatttt 40987418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 4840682 - 4840881
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||||||| |||| ||||||| ||||||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4840682 cacatattaagaaatggaatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 4840781  T
Q  111 attgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    | |||||  |||||||| | |          ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4840782 actgtgtgggagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttggaacaa 4840881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 32 - 199
Target Start/End: Complemental strand, 1381915 - 1381748
Alignment:
Q  32 aaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatgggg 131  Q
    ||||||| ||| || ||||||||||||| |||||||  ||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||| ||| |    
T  1381915 aaataatcattagacataacacttttactaaactgctcttactttataagaaaaagaaaaacttaaaattgcattgaaaattgtgagagaaaagttggag 1381816  T
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    | |||||||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  1381815 aaggtaaagttggaagaaaaaaatcaaagttatattggaaatgtaaagtaacattcattttaaaacaa 1381748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 4766188 - 4766383
Alignment:
Q  32 aaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatgggg 131  Q
    ||||||| ||||||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  4766188 aaataatcattggatataacgttattactaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga---------- 4766277  T
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaa 231  Q
       | ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| |        |||||||||||||||||||||||    
T  4766278 ---gaaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaattgacattcattttgaaacagattttttt-gctaaagtgacactcattttgaa 4766373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 79 - 241
Target Start/End: Complemental strand, 4536700 - 4536530
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaa---aga-----tggggagggtaaagttggaaggaaaaaattaaagttgtattgga 170  Q
    |||||||||||||| ||||||||||||||||||||||||||||||   |||     ||  |||||||||||||| || ||||||||||||||||||||||    
T  4536700 aagaaaaagacaaatttaaagttgcattgaaaattgtgtgagaaagttagagtatttgttgagggtaaagttgggagaaaaaaattaaagttgtattgga 4536601  T
Q  171 aatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||    
T  4536600 aatgtaaagtgacattcattttgaaacaattttttttggctaaagtgacactcattttgaaacggagggag 4536530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 7743598 - 7743401
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||  |||| ||| ||||||| ||  |||||||||||||||| ||  |||| ||||||||||||||||||||||| |||||||||||||||||    
T  7743598 cacagattaaagaattaaatgaaataatcatcagatataacacttttactaagttgcccttactttataagaaaaagacaaatttaaagttgcattgaaa 7743499  T
Q  111 attgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    |||||||  |||||||| |||          ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  7743498 attgtgtgagagaaaagttggactatttattgagggtaaagttggaagaaaaagattaaagttgtattggaaatgtaaagtgacattcattttaaaac 7743401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 1298738 - 1298931
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaat- 112  Q
    ||||||||||||  ||| ||||||| |||| |||||||  |||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||     
T  1298738 agattaagaaataaaatgaaataatcattgaatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 1298837  T
Q  113 -tgtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
     |||| |||||||| |||          |||| ||||||| || |  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  1298838 atgtgagagaaaagttggagaatttattgaggataaagttcgatgagaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaa 1298931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 34225944 - 34225730
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||| |||  ||| ||||||| ||| || |||| | |||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  34225944 agattaaggaatgaaatgaaataatcattagacataataattttactaaattgcccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 34225845  T
Q  114 gtgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagcta 212  Q
    ||||||||             | |||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||| ||        ||||    
T  34225844 gtgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaac-aatttttttggcta 34225759  T
Q  213 aagtgacactcattttgaaacggagggag 241  Q
    ||| |||||||||||||||||| ||||||    
T  34225758 aagcgacactcattttgaaacgaagggag 34225730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 36360351 - 36360522
Alignment:
Q  32 aaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaag------ 125  Q
    ||||||| ||| || ||||||||||||| |||||||| ||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||          
T  36360351 aaataatcattagacataacacttttactaaactgcccttattttataagaaaaagataaacttaaagttgtattgaaaattgtgtgagaaaagtttgag 36360450  T
Q  126 ---atggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
       ||   ||||||||||||| ||| |||||||||||||||||||| ||||| ||||||| |||||||||||    
T  36360451 tatatattgagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatgcaaagtgatattcattttga 36360522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 43388612 - 43388853
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||||||||||| || | |   |  |||||| |||||| ||| |  | ||||||||||||||||| ||||| ||||||||| |||||||    
T  43388612 cacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 43388711  T
Q  111 attgtgtgagaaaaga---tggg--------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| ||||||| || |   || |        ||||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  43388712 attatgtgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 43388811  T
Q  200 annnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |        |||||| ||||||||||||||||||||||||||    
T  43388812 atttttttggctaaaatgacactcattttgaaacggagggag 43388853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 14378219 - 14378371
Alignment:
Q  27 gaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga 126  Q
    |||| ||||||| |||  ||||||||||||||| |||||||| ||||||||||||||||||| ||| |||||||||||||||||||| || ||||         
T  14378219 gaatgaaataatcatttaatataacacttttactaaactgcccttactttataagaaaaagataaatttaaagttgcattgaaaattatgcgaga----- 14378313  T
Q  127 tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
            | |||||||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  14378314 --------gaaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 14378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 24775386 - 24775145
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||  ||||||| ||||||| ||| |||||||||||||||| ||| |||  ||||||||||||||||| ||||| ||||||||  |||||||    
T  24775386 cacaaattaaggtattgaatgaaataatcattagatataacacttttactaaaatgctcttactttataagaaaaaaacaaacttaaagttatattgaaa 24775287  T
Q  111 attgtgt--gagaaaagatg---------gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||  |||||||| ||           ||||||||| |||| || ||||||||||| |||||||| ||||||||||||||| ||||||| ||||||    
T  24775286 attgtgtgagagaaaagttgaagtatttattgagggtaaacttgggagaaaaaaattaaaattgtattgaaaatgtaaagtgacaatcattttaaaacaa 24775187  T
Q  200 annnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |        ||| || ||||||||||| ||||||||||||||    
T  24775186 atttttttggctcaaatgacactcattatgaaacggagggag 24775145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 33093434 - 33093324
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttga 230  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||       ||  |||| |||||||||||| |    
T  33093434 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaaatttttttagtcaaagagacactcattttaa 33093335  T
Q  231 aacggagggag 241  Q
    |||||||||||    
T  33093334 aacggagggag 33093324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 16316863 - 16316710
Alignment:
Q  54 ttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag--aaaagatgg---------ggagggtaaagtt 142  Q
    |||||| ||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||| |||          ||  ||||| ||    
T  16316863 ttttactaaattgcccttactgtataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagataaaagttggaatatttattgaaagtaaattt 16316764  T
Q  143 ggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  16316763 ggaagaaaaaaattaaagttgtattggaaatataaagtgacattcaatttgaaa 16316710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 37107061 - 37106886
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataag--aaaaagacaaaattaaagttgcattga 108  Q
    |||| |||||||||| |||| ||||||||||| || | ||||||||||| ||| |||| ||||||||||||  ||||||| ||| |||||||||||||||    
T  37107061 cacacattaagaaatggaatgaaataattatttgacacaacacttttactaaattgcccttactttataagcaaaaaagaaaaacttaaagttgcattga 37106962  T
Q  109 aaattgtgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaat 173  Q
    |||||||||  |||||||| ||| |         |||||||||||||||| |||||||||||||||||||| ||||    
T  37106961 aaattgtgtgagagaaaagttggagtatttattaagggtaaagttggaagaaaaaaattaaagttgtattgaaaat 37106886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 42970065 - 42969904
Alignment:
Q  32 aaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga--tgg 129  Q
    ||||||||||| ||  |||||||||||| || ||||  ||| ||||||| |||| || ||  ||||||||||||||||||||||||||||||| |  |||    
T  42970065 aaataattattagacgtaacacttttactaa-ctgctcttattttataaaaaaatgataaccttaaagttgcattgaaaattgtgtgagaaaaaagttgg 42969967  T
Q  130 ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||| |||||| || |||| ||||||||||||| |||||  ||||||||||||||||| |||||    
T  42969966 ggaaggtaaaattagaagaaaaaaattaaagtggtattaaaaatgtaaagtgacatttatttt 42969904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 43460961 - 43460860
Alignment:
Q  17 ttaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtg 116  Q
    ||||||||| |||| ||||||| ||||||||   ||||||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||| ||    
T  43460961 ttaagaaatggaatgaaataatcattggata---cacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgtattgaaaattatg 43460865  T
Q  117 tgaga 121  Q
    |||||    
T  43460864 tgaga 43460860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 14698128 - 14698010
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattgg 169  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||||||| |           | ||||||||||| ||||||||||||||| ||||     
T  14698128 ttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagaga-----------gaaaagttggaagaaaaaaattaaagttgcattga 14698040  T
Q  170 aaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||| |||||||||||||||||||    
T  14698039 aaatgtaaagcgacattcattttgaaacaa 14698010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 79 - 241
Target Start/End: Complemental strand, 1360306 - 1360132
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaagatg---------gggagggtaaagttggaaggaaaaaattaaagttgtatt 167  Q
    |||||||||||||| |||||||||||||||||||||| |  |||||||| ||           ||||||||| |||| || |||||||||||||||||||    
T  1360306 aagaaaaagacaaacttaaagttgcattgaaaattgtttaagagaaaagttgaagtatttattgagggtaaaattgggagaaaaaaattaaagttgtatt 1360207  T
Q  168 ggaaatgtaaagtgacattcattttgaaacaa-annnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| ||||||||||||||||||||||||          |||||||||||||||||||||||||||| ||||    
T  1360206 ggaaatgcaaagtgacattcattttgaaacaattttttttttgctaaagtgacactcattttgaaacggatggag 1360132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 241
Target Start/End: Complemental strand, 2459909 - 2459729
Alignment:
Q  74 tttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaag 160  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||||    |||| ||| |         |||||||||||||||| ||||||||||||    
T  2459909 tttataagaataggacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaag 2459810  T
Q  161 ttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||| ||||||||||||||| |||||||||||| ||||||         |||||||  ||||||||||| ||||||||||||    
T  2459809 ttgcattggaaatgtaaagcgacattcattttaaaacaatttttttttgctaaagcaacactcattttaaaacggagggag 2459729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 10580944 - 10581012
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  10580944 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgatattcattttgaaacaa 10581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 18374850 - 18374918
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  18374850 gagggtaaagttggaagaaaaaaattaaaattatattggaaatgtaaagtgacattcattttcaaacaa 18374918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 41984559 - 41984416
Alignment:
Q  70 ttactttataagaaaaagacaaaa-ttaaagttgcattgaaaattgtgtg----agaaaagatgggg---------agggtaaagttggaaggaaaaaat 155  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||    ||||||| ||| |         | |||||||||||||| |||||||    
T  41984559 ttactttataagaataagacaaaacttaaagttgcattgaaaattgtgtgtgagagaaaagttggagtatttattaaaggtaaagttggaagaaaaaaat 41984460  T
Q  156 taaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| |||||||||| || ||| ||||||||||||    
T  41984459 taaagttgtattgaaaatgtaaagcgatatttattttgaaacaa 41984416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 775902 - 776080
Alignment:
Q  74 tttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaag 160  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||    |||| | | |         ||||||||||| |||| ||||||||||||    
T  775902 tttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgggagggaaaagttagagtatttattgagggtaaagttagaag-aaaaaattaaag 776000  T
Q  161 ttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||| |||| |||||||||| ||||||||||||||||| ||        ||||||| |||||||||||||||||||| ||||    
T  776001 ttgcattgaaaatgtaaagcgacattcattttgaaac-aattttttttgctaaagcgacactcattttgaaacggatggag 776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 39561652 - 39561608
Alignment:
Q  243 aactttagaggctaaactcaaatccctagaaaattgttgtaaaat 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  39561652 aactttagaggctaaactcaaatccctagaaaattgttgtaaaat 39561608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 43344312 - 43344412
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaac 233  Q
    ||||||||||||||  ||||||||||||||||||| |||| ||| ||||||||||||||||||| ||        |||||| ||||||||||||||||||    
T  43344312 ggtaaagttggaag--aaaaattaaagttgtattgaaaatataaggtgacattcattttgaaac-aattttttttgctaaaatgacactcattttgaaac 43344408  T
Q  234 ggag 237  Q
    ||||    
T  43344409 ggag 43344412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 25332710 - 25332568
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||| |||||    |||| ||| |         ||| |||||||||||| ||||||||    
T  25332710 ttactttataagaaaaagacaaacttagagttgtattgaaaattgtatgagagagaaaagttggagtatttattgaggataaagttggaag-aaaaaatt 25332612  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||||||| ||||||||||||| | ||| ||||||||||||||||    
T  25332611 aaagttgcattggaaatgtaaggcgacgttcattttgaaacaaa 25332568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 39866762 - 39866820
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||    
T  39866762 ggtaaagttggaagaaaaaaattaaatttgcattggaaatgtaaagcgacattcatttt 39866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 4566139 - 4566186
Alignment:
Q  74 tttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  4566139 tttataagaaaaagataaatttaaagttgcattgaaaattgtgtgaga 4566186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 14511526 - 14511459
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||| ||||||| | ||||||||||||| ||||||||  |||||||||| ||||||||||||||||||    
T  14511526 gaggataaagtttggaggaaaaaattaatgttgtattcaaaatgtaaagagacattcattttgaaaca 14511459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 45148055 - 45148106
Alignment:
Q  148 gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  45148055 gaaaaaattaaagttttattgaaaatgtaaagtgacattcattttaaaacaa 45148106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 6592013 - 6591963
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  6592013 aaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 6591963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 11171941 - 11171839
Alignment:
Q  10 gcacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    ||||| ||||||||||||||||||||||| | | || ||||||||||||| ||| |  | | |||||||  |||||||||||| |||||||| ||||| |    
T  11171941 gcacaaattaagaaattgaataaaataatcaatagacataacacttttactaaattatcctaactttatgcgaaaaagacaaacttaaagttacattgga 11171842  T
Q  110 aat 112  Q
    |||    
T  11171841 aat 11171839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 19506018 - 19505934
Alignment:
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggaggga 240  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||||       || |||||||||||||||||| ||| |||||||    
T  19506018 ttaaagttgtattgggaat-taaagtgacatttattttgaaacaaatttttttagttaaagtgacactcattttaaaatggaggga 19505934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 10580870 - 10580921
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||||||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  10580870 ttactttataagaacaagacaatcttaaagttgtattgaaaattgtgtgaga 10580921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 39866685 - 39866736
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||||||| ||||||| |||||| ||||||||| ||||||||||||||||||    
T  39866685 ttactttacaagaaaatgacaaacttaaagttgtattgaaaattgtgtgaga 39866736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 45372645 - 45372736
Alignment:
Q  158 aagttgtattggaaatgtaaagtgacattcattttgaaacaa-annnnnnnagctaaagtgacactcattttgaaacggagggagcaacttt 248  Q
    ||||||||||| ||||||||||||||||||||||| ||||||          |||||||||||| ||||||||||| |||||||| ||||||    
T  45372645 aagttgtattgaaaatgtaaagtgacattcattttaaaacaattttttttttgctaaagtgacattcattttgaaatggagggagtaacttt 45372736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 43344199 - 43344288
Alignment:
Q  32 aaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||||| ||| || |||||| |||||  ||||  || ||||||||||||||||||| ||  ||||||||| |||||||||| |||||||    
T  43344199 aaataatcattagacataacaattttattaaaccacccttactttataagaaaaagataagtttaaagttgtattgaaaattatgtgaga 43344288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 602
Target Start/End: Complemental strand, 39561583 - 39561551
Alignment:
Q  570 tgtgtgatatgtaccctacttattatgattgat 602  Q
    |||||||||||||||||||||||||||||||||    
T  39561583 tgtgtgatatgtaccctacttattatgattgat 39561551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 43460839 - 43460792
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 178  Q
    |||||||| ||||||||  |||| ||||||||||||||||||||||||    
T  43460839 gagggtaacgttggaagagaaaacttaaagttgtattggaaatgtaaa 43460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 33093508 - 33093458
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag 120  Q
    ||||||||||| |  |||| ||| |||||||||||||||||||||||||||    
T  33093508 ttactttataacatcaagataaacttaaagttgcattgaaaattgtgtgag 33093458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 211 - 241
Target Start/End: Original strand, 45148121 - 45148151
Alignment:
Q  211 taaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||||||||||||||    
T  45148121 taaagtgacactcattttgaaacggagggag 45148151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 4566214 - 4566263
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacat 185  Q
    |||||||| ||  |||||||||||||||||||  ||||||||||||||||    
T  4566214 taaagttgaaaaaaaaaaattaaagttgtattaaaaatgtaaagtgacat 4566263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 14511589 - 14511552
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtg 116  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  14511589 aagaaaaagacaaatttaaagttacattgaaaattgtg 14511552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 4133229 - 4133261
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  4133229 gctaaagcgacactcattttgaaacggagggag 4133261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 43388603 - 43388571
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  43388603 gctaaagcgacactcattttgaaacggagggag 43388571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 2e-57; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 28044101 - 28044321
Alignment:
Q  16 attaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 115  Q
    ||||||||||  ||| ||||||| ||||||||||||  |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  28044101 attaagaaataaaatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgtattgaaaattgt 28044200  T
Q  116 gt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaa 213  Q
    ||  |||||||  ||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||        | ||||    
T  28044201 gtgagagaaaaattggagaggataaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaatttttttta-ctaa 28044299  T
Q  214 agtgacactcattttgaaacgg 235  Q
    ||||||||||||||||||||||    
T  28044300 agtgacactcattttgaaacgg 28044321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 12 - 200
Target Start/End: Original strand, 36447567 - 36447757
Alignment:
Q  12 acagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaa 111  Q
    |||||||||||||| |||| ||||||||| |||||||||| ||||||  |||||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  36447567 acagattaagaaatggaatgaaataattactggatataactcttttattaaactgtctttactttataagaaaaagataaaattaaagttgaattgaaaa 36447666  T
Q  112 t--tgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |  |||| |||||||| |||  |||||||||||||||| |||||||||||||||||||| |||| |||||||| ||||||||| |||||||    
T  36447667 ttatgtgagagaaaagttggaaagggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgatattcattttaaaacaaa 36447757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 32275350 - 32275161
Alignment:
Q  54 ttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtga--gaaaagatggggagggtaaagttggaaggaaa 151  Q
    |||||| ||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||  |||||| | | ||||||||||||||||| |||    
T  32275350 ttttactaaactgcctttactttataagaaaaaatcaaacttaaagttgcattgaaaattgtgtgaaggaaaagtttgagagggtaaagttggaagaaaa 32275251  T
Q  152 aaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||        |||||||||||||| |||||||||||||| ||||    
T  32275250 aaattaaagttgtattagaaatgtaaagtggcattcattttgaaacaattttttttagctaaagtgacacacattttgaaacggatggag 32275161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 17869435 - 17869194
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||| ||||||| ||| || ||||||||||||  ||| || ||||||||||||||||||| ||||| |||||||||||||||||    
T  17869435 cacagattaaggaatgaaatgaaataatcattagacataacacttttattaaattgtctttactttataagaaaaatacaaacttaaagttgcattgaaa 17869336  T
Q  111 attgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||  |||||||||| |          |||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  17869335 attgtgtgagagaaaagattgagtatttattgaggataaagttggaaggaaaaaattaaagttgcattggaaatgtaaaatgacattcattttgaaacaa 17869236  T
Q  200 annnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |        |||||||||||||||||||| ||||||||||||    
T  17869235 atttttttcgctaaagtgacactcattttaaaacggagggag 17869194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 22627345 - 22627495
Alignment:
Q  47 ataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaagatggggagggtaaagttgg 144  Q
    ||||||| ||||| |||||||||||||||||||| || |||||||| ||||||||||||||||||||||||  |||||||| ||| ||||||||||||||    
T  22627345 ataacacatttactaaactgcctttactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagaaaagttggagagggtaaagttgg 22627444  T
Q  145 aag--gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttg 193  Q
    |||   |||||||||||||||||||||||||||||||||||||||||||||    
T  22627445 aagaaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttg 22627495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 42121740 - 42121507
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||| ||||||| ||| || ||| ||||||||| |||||| | ||||||||| ||||||||| | | |||||||||||||||||    
T  42121740 cacagattaaggaatgaaatcaaataatcattagacatatcacttttactaaactgaccttactttattagaaaaagatacacttaaagttgcattgaaa 42121641  T
Q  111 attgtgtgaga--aaagatggggagggtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnn 207  Q
    ||||| |||||  |||| ||| ||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||            
T  42121640 attgtttgagagaaaagttggagagagtaaagttggaagaaaaaaaattaaagttgtattggaaatataaagtgacattcattttgaaacaatttttttt 42121541  T
Q  208 agctaaagtgacactcattttgaaacggagggag 241  Q
     |||||||||||| ||||||| ||||||||||||    
T  42121540 tgctaaagtgacattcattttaaaacggagggag 42121507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 34002087 - 34002277
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgc-ctttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||||||||||||||  ||| ||||||| |||||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34002087 cacagattaagaaatgaaatgaaataatcattggatataacacctttgctaaactgcactttactttataagaaaaagacaaaattaaagttgcattgaa 34002186  T
Q  110 aattgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcat 189  Q
    ||||||||  |||||||| |||          ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  34002187 aattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaataaaattaaacttgtattggaaatgtaaagtgacattcat 34002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 40207379 - 40207574
Alignment:
Q  45 atataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttgg 144  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||| | |||||| ||  |||| ||||||||     
T  40207379 atataacacttttactaaactgcccttactttataagaaaatgacaaacttaaaattgcattgaaaattgtgag-gaaaagttgaagaggataaagttga 40207477  T
Q  145 aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||| |||||||||||||||||||  |||| |||| |||||||||||||||| |||         |||||||||||||||||||||||||||||||||    
T  40207478 aagaaaaaaattaaagttgtattaaaaatataaaatgacattcattttgaagcaattttttttggctaaagtgacactcattttgaaacggagggag 40207574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 41905890 - 41906122
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||  | | ||||||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41905890 cacagattaagaaatgaactgaaataatcattggatataacgcttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 41905989  T
Q  111 attgtgt--gagaaaagatgggg--------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||  |||||||| ||| |          ||||||||||||||  |||| ||||||||||||| |||||||||||||||||| ||||| |||||||    
T  41905990 attgtgtaagagaaaagttggagtatttattgaggtaaagttggaagagaaaacttaaagttgtattagaaatgtaaagtgacatttattttaaaacaaa 41906089  T
Q  201 nnnnnnnagctaaagtgacactcattttgaaac 233  Q
           ||||||||||||| ||||||| ||||    
T  41906090 tttttttagctaaagtgacattcattttaaaac 41906122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 18886843 - 18886667
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||| |||||||| |||| ||||||| ||| |||||||| ||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  18886843 cacagactaagaaatggaatgaaataatcattagatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaa 18886744  T
Q  111 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||||||||   |||||          ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  18886743 attgtgtg---aaaga----------aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgagattcattttaaaacaaa 18886667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 33056242 - 33056433
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttat-aagaaaaagacaaaattaaagttgcattgaaaat 112  Q
    |||||||| |||  ||| ||||||| |||  | ||||||||||||| |||||||| ||||||||| |||||||||||||| |||||  ||||||||||||    
T  33056242 agattaaggaatgaaatgaaataatcattaaacataacacttttactaaactgcccttactttattaagaaaaagacaaatttaaaactgcattgaaaat 33056341  T
Q  113 tgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaa---tgtaaagtgacattcattttgaaacaaa 200  Q
    |||||  |||||||| ||| |||| ||||||| ||| |||||||||||||||||||||||||   |||||| ||||||| |||||||||||||    
T  33056342 tgtgtgagagaaaagttggagaggataaagtt-gaaagaaaaaattaaagttgtattggaaatgttgtaaaatgacatttattttgaaacaaa 33056433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 79 - 241
Target Start/End: Complemental strand, 40298977 - 40298804
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtatt 167  Q
    |||||||||||||| |||||||| |||||||||||||||||||  |||| ||| |         ||||||||||||| || |||||||||||||||||||    
T  40298977 aagaaaaagacaaacttaaagttacattgaaaattgtgtgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtatt 40298878  T
Q  168 ggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    | ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||    
T  40298877 gaaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtgacactcattttgaaacggagggag 40298804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 3680878 - 3681077
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||| |||| |||| ||||||| ||| || |||| |||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| |||    
T  3680878 cacagattaaaaaatggaatgaaataatcattagacataaaacttttactaaactgctcttactttataagaaaaagacaaatttaaagttgcatttaaa 3680977  T
Q  111 at--tgtgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||  |||| |||||||| | | |         | |||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  3680978 attctgtgagagaaaagttagtgtatttattaatggtaaagttggaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 3681077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 34 - 237
Target Start/End: Original strand, 42259527 - 42259740
Alignment:
Q  34 ataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag--aaaagatgg-- 129  Q
    ||||||||| || ||||||||||||| ||| |||| ||||||||||||||||||||||  |||||||||||||||||||| ||||||  ||||| | |      
T  42259527 ataattattagacataacacttttactaaaatgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattatgtgagacaaaagtttgag 42259626  T
Q  130 -------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacact 222  Q
            |||||||||||||||| ||||||||||||||||||||| ||| ||||| | ||||||||||| ||||||        | |||||||||||||    
T  42259627 tatttattgagggtaaagttggaa-gaaaaaattaaagttgtattgaaaacgtaaaataacattcattttaaaacaattttttttaactaaagtgacact 42259725  T
Q  223 cattttgaaacggag 237  Q
     ||||||||||||||    
T  42259726 tattttgaaacggag 42259740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 12 - 241
Target Start/End: Complemental strand, 1103681 - 1103440
Alignment:
Q  12 acagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaa 111  Q
    ||||||||||||||  ||| ||||||| |   || | |||| |||||| ||||| || ||||||||||| ||||| ||||| |||||||| |||||||||    
T  1103681 acagattaagaaataaaatgaaataatcaccagacaaaacatttttactaaactacccttactttataaaaaaaaaacaaatttaaagttacattgaaaa 1103582  T
Q  112 ttgtgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||||||||||  |||| ||  |         |||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  1103581 ttgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaacaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaaa 1103482  T
Q  201 -nnnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
             |||||||||||||||||| ||||||||| ||||    
T  1103481 ttttttctggctaaagtgacactcattatgaaacggatggag 1103440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 22597297 - 22597191
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttga 230  Q
    |||| |||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  22597297 gaggttaaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaaattcttttggctaaagtgacactcattttga 22597198  T
Q  231 aacggag 237  Q
    |||||||    
T  22597197 aacggag 22597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 34733500 - 34733394
Alignment:
Q  18 taagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt 117  Q
    ||||||||  ||| ||||||| ||| || ||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||     
T  34733500 taagaaatgaaatgaaataatcattagacataacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtga 34733401  T
Q  118 gagaaaa 124  Q
    |||||||    
T  34733400 gagaaaa 34733394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 43813431 - 43813538
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttga 230  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||        ||||||| |||||||||||| |    
T  43813431 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaaattttgttggctaaagcgacactcattttaa 43813530  T
Q  231 aacggagg 238  Q
    ||||||||    
T  43813531 aacggagg 43813538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 19288434 - 19288544
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttga 230  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||          |||||||||||||||||||||    
T  19288434 gagggtaaagttagaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaataatttttttttactaaagtgacactcattttga 19288533  T
Q  231 aacggagggag 241  Q
    |||||||||||    
T  19288534 aacggagggag 19288544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 19906553 - 19906413
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatggg---------gagggtaaagttggaaggaaaaaattaa 158  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||| ||||  |||| |||          ||||||||||||||||| ||||||| ||    
T  19906553 ttactttataggaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaagttggaatatttattgagggtaaagttggaagaaaaaaataaa 19906454  T
Q  159 agttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  19906453 agttgtattggaaatgtaaagcgacattcattttgaaacaa 19906413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 32345789 - 32345991
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||||||||||| || | |   |  |||||| |||||| ||| |  | ||||||||||||||||| ||||| ||||||||| |||||||    
T  32345789 cacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 32345888  T
Q  111 attgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    |||||||||||    |||| ||| |         |||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  32345889 attgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaac 32345988  T
Q  198 aaa 200  Q
    |||    
T  32345989 aaa 32345991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 36836123 - 36836019
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaac 233  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||         |||||| |||||||||||||||||    
T  36836123 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcattttgaaacaaattattttgactaaagcgacactcattttgaaac 36836024  T
Q  234 ggagg 238  Q
    |||||    
T  36836023 ggagg 36836019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 70 - 241
Target Start/End: Complemental strand, 26963620 - 26963436
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||    |||| ||| |         |||||||||||||||| ||||||||    
T  26963620 ttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagttggagtattcattgagggtaaagttggaagaaaaaaatt 26963521  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| ||||||||||||||  |||||| ||||||||||||         |||||||  |||||||||||||||||| |||||    
T  26963520 aaagttgcattggaaatgtaaatagacatttattttgaaacaattttttttggctaaagcaacactcattttgaaacggggggag 26963436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 30515037 - 30514972
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30515037 ggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaacaa 30514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 74 - 199
Target Start/End: Original strand, 31416768 - 31416906
Alignment:
Q  74 tttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga---aaagatggg----------gagggtaaagttggaaggaaaaaattaaag 160  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||   ||| || |           ||||||||||||||||| ||||||||||||    
T  31416768 tttataagaacaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaaattgaagtatttattgagggtaaagttggaagaaaaaaattaaag 31416867  T
Q  161 ttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||| ||||||||||||| ||||||||| ||||||    
T  31416868 ttgtattgaaaatgtaaagtgatattcattttaaaacaa 31416906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 36447083 - 36447261
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||||||||    |||| ||| |         ||| ||||||||||||  |||||||    
T  36447083 ttactttataagaataagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttaatgaggataaagttggaagagaaaaatt 36447182  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacgga 236  Q
    ||| |||||||| ||||||||| |||||||||||||||||| ||       |||||||| ||||||||||||||||||||    
T  36447183 aaaattgtattgaaaatgtaaaatgacattcattttgaaac-aatttttttagctaaagcgacactcattttgaaacgga 36447261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 42044066 - 42044131
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  42044066 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattaattttgaaa 42044131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 26527356 - 26527544
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||| ||||  |||||| ||| || ||||||| ||||| ||||||| |||||||||||||||||| | ||| ||||||||||||||||||||    
T  26527356 agattaagaaatggaatgcaataatcattagacataacacctttactaaactgcttttactttataagaaaaa-aaaaatttaaagttgcattgaaaatt 26527454  T
Q  114 gtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
     | |   ||||||| |||          |||| ||||||| |||| |||||||||||||||||||| ||||||||| | |||||||||||    
T  26527455 atttaacagaaaagttggagtatttattgaggttaaagttagaagaaaaaaattaaagttgtattgaaaatgtaaaataacattcatttt 26527544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 19920358 - 19920419
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  19920358 gagggtaaagttgagagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 19920419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 132 - 232
Target Start/End: Original strand, 10684918 - 10685018
Alignment:
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaa 231  Q
    |||||||||||||||| ||||||||||||||| |||| ||||||||||   ||||||||||||||||||        ||||||| |||||||||||||||    
T  10684918 agggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcagcattcattttgaaacaaattattttggctaaagcgacactcattttgaa 10685017  T
Q  232 a 232  Q
    |    
T  10685018 a 10685018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 18733502 - 18733410
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||         ||||||| |||||||||||| ||||||| ||||    
T  18733502 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaattttttttggctaaagcgacactcattttaaaacggatggag 18733410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 42010541 - 42010640
Alignment:
Q  22 aaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||| |||||| ||||| ||| || |||| | |||||| |||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  42010541 aaatagaataagataatcattagacataatatttttactaaactgcccttattttataagaaaaagacaaacttaaagttacattgaaaattgtatgaga 42010640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 39117502 - 39117638
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga---aaagatgg---------ggagggtaaagttggaaggaaaaaatta 157  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||   |||  |||          |||||||| |||||||| ||| |||||    
T  39117502 ttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaattggagtattcattgagggtaatgttggaagaaaataatta 39117601  T
Q  158 aagttgtattggaaatgtaaagtgacattcattttga 194  Q
    ||||||||||| |||||||||  ||||||||||||||    
T  39117602 aagttgtattgaaaatgtaaaacgacattcattttga 39117638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 5723128 - 5723006
Alignment:
Q  83 aaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaa 171  Q
    |||||||||| ||||||||||||||||||||||||  |||||||| | |          |||||||||||| | | ||||||||||||||||||||| ||    
T  5723128 aaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattgagggtaaagttagga-gaaaaaattaaagttgtattgaaa 5723030  T
Q  172 atgtaaagtgacattcattttgaa 195  Q
    ||||||||||||||||||||||||    
T  5723029 atgtaaagtgacattcattttgaa 5723006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 10684843 - 10684894
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  10684843 ttactttataagaaaaagacaaacttaaagttgaattgaaaattgtgtgaga 10684894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 30833066 - 30833241
Alignment:
Q  27 gaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga 126  Q
    |||| ||||||||||| |||||||||||||||| ||| || |||   |||||| |||||||||||| ||| |||| || ||||||||||||||||||| |    
T  30833066 gaatgaaataattattagatataacacttttactaaattgtcttgt-tttatatgaaaaagacaaacttagagttacactgaaaattgtgtgagaaaaaa 30833164  T
Q  127 tggggag-----------ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
       ||||           |||||||||| ||| ||||||| |||||||||||| ||||||||| ||| |||||||||    
T  30833165 gttggagtatttattgaaggtaaagttgaaagaaaaaaataaaagttgtattgaaaatgtaaaatgatattcatttt 30833241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 6521958 - 6521907
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  6521958 ttactttataagaaaaagacaaacttaaaattgtattgaaaattgtgtgaga 6521907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 19277059 - 19277110
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  19277059 ttactttatatgaacaagacaaacttaaagttgcattgaaaattgtgtgaga 19277110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 32873268 - 32873319
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  32873268 aaaaaattaaaattgtattggaaatataaagtgacattcattttaaaacaaa 32873319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 33845433 - 33845478
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaa 124  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||    
T  33845433 aagaaaaagacaaacttaaagttgcattgaaaattgtgcgagaaaa 33845478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 47272313 - 47272240
Alignment:
Q  47 ataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag 120  Q
    |||||| |||||| |||||||| ||  |||||| ||||||||||||  |||| |||||||||||||||||||||    
T  47272313 ataacaattttactaaactgcccttgttttatatgaaaaagacaaacataaaattgcattgaaaattgtgtgag 47272240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 40800008 - 40799947
Alignment:
Q  180 tgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  40800008 tgacattcattttgaaacaaattatttttgctaaagtgacactcattttgaaacggagggag 40799947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 18733583 - 18733540
Alignment:
Q  81 gaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaa 124  Q
    |||||||||||| ||||||||||||||||| |||||||||||||    
T  18733583 gaaaaagacaaatttaaagttgcattgaaagttgtgtgagaaaa 18733540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 74 - 199
Target Start/End: Original strand, 29001582 - 29001696
Alignment:
Q  74 tttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaat 173  Q
    |||||| ||| || ||||| ||||||||||||||||||||||||||||||  |           |||||||||| | |||||||| ||| ||||||||||    
T  29001582 tttataggaacaaaacaaacttaaagttgcattgaaaattgtgtgagaaataa-----------aagttggaagaataaaattaaggttatattggaaat 29001670  T
Q  174 gtaaagtgacattcattttgaaacaa 199  Q
    |||||  |||||| ||||||||||||    
T  29001671 gtaaaacgacattaattttgaaacaa 29001696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 40805073 - 40805030
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  40805073 aaaaaattaaagttgtattgtaaatgtaaagtgacatttatttt 40805030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 48838711 - 48838750
Alignment:
Q  82 aaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  48838711 aaaaagacaaatttaaagttgcattgaaaattgtgtgaga 48838750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 36836199 - 36836148
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||||||||  || |||||||| |||||||||||||||||||| |||||||    
T  36836199 ttactttatagaaacaagacaaatttaaagttgcattgaaaattatgtgaga 36836148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 36912124 - 36912064
Alignment:
Q  181 gacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||||||||||||||||        ||||||| |||||||||||||||||||||||||    
T  36912124 gacattcattttgaaacaaattttttttgctaaagcgacactcattttgaaacggagggag 36912064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 200
Target Start/End: Complemental strand, 42753744 - 42753705
Alignment:
Q  161 ttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  42753744 ttgtattggaaattgaaagtgacattcattttgaaacaaa 42753705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 47271789 - 47271731
Alignment:
Q  135 gtaaagttggaaggaaaaaat-taaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||||||||||||| ||||||  |||||||||||||||||| || |||| ||||||||||    
T  47271789 gtaaagttggaagaaaaaaaactaaagttgtattggaaatctagagtgtcattcatttt 47271731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 1742198 - 1742230
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  1742198 gctaaagcgacactcattttgaaacggagggag 1742230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 18292322 - 18292290
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  18292322 gctaaagcgacactcattttgaaacggagggag 18292290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 19906621 - 19906653
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  19906621 gctaaagcgacactcattttgaaacggagggag 19906653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 32345780 - 32345748
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  32345780 gctaaagcgacactcattttgaaacggagggag 32345748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 33296028 - 33296064
Alignment:
Q  278 gttgtaaaatgacatttaatgtcactttaattaataa 314  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  33296028 gttgtaaaatgacaattattgtcactttaattaataa 33296064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 3e-56; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 48259818 - 48260008
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| ||| |||| |||||||  || || ||||||||||||  |||||||| || |||||||||||||||| ||| |||||||||||||||||    
T  48259818 cacagattaaggaatagaatgaaataatcgttagacataacacttttattaaactgcccttgctttataagaaaaagataaacttaaagttgcattgaaa 48259917  T
Q  111 attgtgtga--gaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||  |||||| | | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48259918 attgtgtgaaagaaaagtttgagagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 48260008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 1430491 - 1430666
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgc-ctttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||||||||||||||| ||| ||||||| ||| |||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||| |    
T  1430491 cacagattaagaaatttaatgaaataataattagatataacacttttactaaactgcactttactttataagaaaaagacaaacttaaagttgcattgga 1430590  T
Q  110 aattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||||||| ||             | ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1430591 aattgtgtgtga-------------gaaaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaaca 1430666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 40060861 - 40061048
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||| ||||||| ||| || ||||||||||||| ||| |||| ||||||||||||||||||| ||  ||| |||||||||||||    
T  40060861 cacatattaagaaatgaaatgaaataatgattagacataacacttttactaaattgcccttactttataagaaaaagataattttatagttgcattgaaa 40060960  T
Q  111 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||| |||  |||||||| ||| |||||||||||| |||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  40060961 attttgtaagagaaaagttggagagggtaaagtttgaaaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 40061048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 11650254 - 11650056
Alignment:
Q  12 acagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaa 111  Q
    ||||||||||||||||||| ||||||  ||| ||||||  | |||||| |||||||| |||||||| |||||||||||||| |||||||||||||| |||    
T  11650254 acagattaagaaattgaatgaaataaccattagatatagtatttttactaaactgcccttactttaaaagaaaaagacaaacttaaagttgcattggaaa 11650155  T
Q  112 ttgtgtgaga-aaagatggg----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||| ||| || ||          ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11650154 ttgtgtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 11650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 84473 - 84690
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||||||| ||||||| ||| || ||||||||||||| ||| || | ||||||||||||||||||||||| |||||||||||||||||    
T  84473 cacagattaaggaattgaatgaaataatcattagacataacacttttactaaaatgtccttactttataagaaaaagacaaacttaaagttgcattgaaa 84572  T
Q  111 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagc 210  Q
    |||||| ||||             | ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||         ||    
T  84573 attgtgcgaga-------------gaaaaattggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaacaatttttttttgc 84659  T
Q  211 taaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||| ||| ||||||||||||    
T  84660 taaagtgacactcaatttaaaacggagggag 84690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 24040983 - 24041155
Alignment:
Q  15 gattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattg 114  Q
    ||||||| ||| |||| ||||||| ||| || ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  24040983 gattaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattg 24041082  T
Q  115 tgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||             | |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24041083 tgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 24041155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 1429059 - 1428865
Alignment:
Q  16 attaagaaattgaataaaataattattggatataacacttttaccaaactg-cctttactttataagaaaaagacaaaattaaagttgcattgaaaattg 114  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||| |||||| ||||||||| |||| ||||||    
T  1429059 attaagaaattgaatgaaataattattagatataacacttttactaaactgccctttactttataagaaaaggacaaacttaaagttgaattggaaattg 1428960  T
Q  115 tgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||  |||||||| | |          ||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  1428959 tgtgagagaaaagtttgagtatttattgagggtaaagttgcaagaaaaaaatttaagttgtattagaaatgtaaagtgacattcattttaaaaca 1428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 28751363 - 28751605
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||||||||||| ||| || |||||| |||||| |||||||| |||||||||||||||| |||||| |||||||| ||||||||    
T  28751363 cacagattaaggaatgaaataaaataatcattagacataacatttttactaaactgcccttactttataagaaaaggacaaacttaaagttacattgaaa 28751462  T
Q  111 attgt--gtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgaca-ttcattttgaaaca 198  Q
    |||||  | |||||||| | |          ||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |    
T  28751463 attgtgcgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacatttcattttgaaata 28751562  T
Q  199 aannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |         |||||||||||||||||||||||||||| ||||    
T  28751563 attttttttggctaaagtgacactcattttgaaacggatggag 28751605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 237
Target Start/End: Original strand, 5317535 - 5317769
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcct-ttactttataagaaaaagacaaaattaaagttgcattgaaaat 112  Q
    |||||||| |||  ||| ||||||| ||| || ||||||||||||| ||| ||||  ||| ||||||||||||||||||| |||||||||||||||||||    
T  5317535 agattaaggaatgaaatgaaataatcattagacataacacttttactaaattgccccttattttataagaaaaagacaaacttaaagttgcattgaaaat 5317634  T
Q  113 tgtgt-gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaann 202  Q
    ||||  |||||||| ||  |         |||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||      
T  5317635 tgtggagagaaaagttgtagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaattgtaaagtgacattcattttgaaacaaatt 5317734  T
Q  203 nnnnnagctaaagtgacactcattttgaaacggag 237  Q
          | |||||||||||||||||||||||||||    
T  5317735 ttgttggataaagtgacactcattttgaaacggag 5317769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 43929881 - 43929640
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||||||| ||||||| ||| || ||||||||||||| | ||| || |||||||||||||||||||| || ||||||||| || ||||    
T  43929881 cacaaattaagaaattgaatgaaataatcattagacataacacttttactatacttccattactttataagaaaaagactaacttaaagttgtatcgaaa 43929782  T
Q  111 attgtgtgagaaaagatggg----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa- 199  Q
    ||| ||||||| || |  ||          ||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||     
T  43929781 attatgtgagagaaaagtggagtatttattgagggtaaagttggaaggaaaaaattaaagttgtattggaaactgaaattgacattcattttgaaacaat 43929682  T
Q  200 annnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
             |||||||||||||||||||||||||||||||||    
T  43929681 tttttttttgctaaagtgacactcattttgaaacggagggag 43929640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 70 - 240
Target Start/End: Original strand, 44582792 - 44582975
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||    |||| ||| |         |||||||||||||||| ||||||||    
T  44582792 ttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagtatttattgagggtaaagttggaagaaaaaaatt 44582891  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggaggga 240  Q
    |||||||||||||||||||||||||||||| ||||||||| |||       || ||||||||||||||||||||||||||||||    
T  44582892 aaagttgtattggaaatgtaaagtgacatttattttgaaataaattgttttagttaaagtgacactcattttgaaacggaggga 44582975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 50349812 - 50350054
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataa------gaaaaagacaaaattaaagttgca 104  Q
    |||| |||||| ||| |||| ||||||| ||| || ||||||||||||| |||||||| |||||||||||      |||||||||||| |||||||||||    
T  50349812 cacaaattaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttactttataattataagaaaaagacaaacttaaagttgca 50349911  T
Q  105 ttgaaaattgtgtgaga--aaagatggggagggtaa--agttggaaggaaaaaattaaagttgtattggaaatgtaaagtgac--attcattttgaaaca 198  Q
    |||||||||||||||||  |||| | | |    ||   || |||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  50349912 ttgaaaattgtgtgagagaaaagtttgagtatttattgaggtggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatattcattttgaaaca 50350011  T
Q  199 aannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |         |||||||||| ||||||||||||||||||||||    
T  50350012 attttttttggctaaagtgatactcattttgaaacggagggag 50350054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 70 - 241
Target Start/End: Complemental strand, 2459144 - 2458964
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaag 160  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||| |||||||| | | |         |||||||||||||||| ||||||||||||    
T  2459144 ttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgagagaaaagtttgagtatttgttgagggtaaagttggaagaaaaaaattaaag 2459045  T
Q  161 ttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||| |||| |||||||||| ||||||||||||||||||||        ||||||  |||||||||||||||||||||||||    
T  2459044 ttgcattgaaaatgtaaagcgacattcattttgaaacaaatttttttggctaaaacgacactcattttgaaacggagggag 2458964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 47 - 241
Target Start/End: Complemental strand, 12002407 - 12002202
Alignment:
Q  47 ataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggag-----------gg 135  Q
    |||| |||||||| |||||||| ||  |||||| |||||||||||| ||||||||||||||||||||||||||||||| |   ||||           ||    
T  12002407 ataatacttttactaaactgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgaagg 12002308  T
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacgg 235  Q
    ||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||        |||||||  |||||||||||| ||||||    
T  12002307 taaagctggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttaaaacaattttttttagctaaaacgacactcattttaaaacgg 12002208  T
Q  236 agggag 241  Q
    ||||||    
T  12002207 agggag 12002202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 47 - 196
Target Start/End: Original strand, 17919811 - 17919971
Alignment:
Q  47 ataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga-----------tggggaggg 135  Q
    ||||||||||||| |||||||| ||  ||||||  ||||||||||| ||||||||||||||||||||||||||||||| |           |   |||||    
T  17919811 ataacacttttactaaactgcccttgttttatattaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttagagtatatattgaggg 17919910  T
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  17919911 taaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgatattcattttgaaa 17919971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 52403672 - 52403563
Alignment:
Q  12 acagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaa 111  Q
    |||||||||||||| |||| ||||||| ||||||||||||||| |||  |||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  52403672 acagattaagaaatggaatgaaataatcattggatataacactgttattaaactgcccttactttataaggaaaagacaaaattaaagttgcactgaaaa 52403573  T
Q  112 ttgtgtgaga 121  Q
    || |||||||    
T  52403572 ttatgtgaga 52403563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 38132204 - 38132322
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattgg 169  Q
    |||||||||| ||| |||||| | ||||||||||||||||||||||||||||||           | ||||||||||| |||||||||||||||||||||    
T  38132204 ttactttataggaacaagacatacttaaagttgcattgaaaattgtgtgagaaa-----------gaaaagttggaagaaaaaaattaaagttgtattgg 38132292  T
Q  170 aaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||||||||||||||||    
T  38132293 aaatgtaaagtgacattcattttgaaacaa 38132322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 6332364 - 6332251
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||||||| ||||||| ||| || ||||||||||||| |||||||||||  |||||| ||||||||||||  ||||||| ||||||||    
T  6332364 cacaaattaagaaattgaatgaaataatcattagacataacacttttactaaactgcctttgttttatatgaaaaagacaaacataaagttacattgaaa 6332265  T
Q  111 attgtgtgagaaaa 124  Q
    ||||||||||||||    
T  6332264 attgtgtgagaaaa 6332251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 54 - 198
Target Start/End: Original strand, 37437402 - 37437549
Alignment:
Q  54 ttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga---tggggagggtaaagttggaaggaa 150  Q
    |||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| || |   | | |||| |||||||| ||| ||    
T  37437402 ttttactaaattgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaattagagaggataaagttgaaagaaa 37437501  T
Q  151 aaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    | ||||||| |||||||| |||||||||| || | |||||||||||||    
T  37437502 ataattaaaattgtattgaaaatgtaaagcgatactcattttgaaaca 37437549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 30006327 - 30006182
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||  |||||||| ||||||| ||| || |||||||| |||| ||| |||  ||||||||||||||||||| ||| |||||||||||||||||    
T  30006327 cacagattaatgaattgaatgaaataatcattagacataacactattactaaattgctcttactttataagaaaaagataaatttaaagttgcattgaaa 30006228  T
Q  111 attg--tgtgagaaaagatggggagggtaaagttggaaggaaaaaa 154  Q
    ||||  || |||||||| ||| ||||||||||||| ||| ||||||    
T  30006227 attgtttgagagaaaagttggagagggtaaagttgaaagaaaaaaa 30006182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 254926 - 255068
Alignment:
Q  71 tactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag----aaaagatgggg---------agggtaaagttggaaggaaaa-aatt 156  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    ||||| ||| |         |||||||||||||||| |||| ||||    
T  254926 tactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaatt 255025  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||| ||||||||||||||| |||||||||||||||||||    
T  255026 aaagttgcattggaaatgtaaagcgacattcattttgaaacaa 255068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 10690910 - 10691074
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||| ||||||| ||| ||||||||| |||||| |||||||  ||||||  ||||||||||||||| |||||||||||||||||    
T  10690910 cacatattaagaaatgaaatgaaataatcattagatataacatttttactaaactgcacttacttcgtaagaaaaagacaaacttaaagttgcattgaaa 10691009  T
Q  111 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattca 188  Q
    ||||||||||| |             ||||||| ||| ||||||||| |||||||||| |||||||||||||||||||    
T  10691010 attgtgtgagata-------------aaagttgaaagaaaaaaattatagttgtattgaaaatgtaaagtgacattca 10691074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 47 - 237
Target Start/End: Original strand, 17806366 - 17806567
Alignment:
Q  47 ataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatgggg---------aggg 135  Q
    |||||| |||||| ||| |  |||| |||||||||||||||||||| ||||| |||||||||||||||| |||||  |||| ||| |         | ||    
T  17806366 ataacaattttactaaaataactttcctttataagaaaaagacaaacttaaaattgcattgaaaattgtatgagagaaaagttggagtatttattgaagg 17806465  T
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacgg 235  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||| ||||||| ||||||         |||||||||||||||||||||||||||    
T  17806466 taaaattggaagtaaaaaattaaagttgtattggaaatgtaaagcgacactcattttaaaacaattttttttggctaaagtgacactcattttgaaacgg 17806565  T
Q  236 ag 237  Q
    ||    
T  17806566 ag 17806567  T

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Target: chr1; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 74 - 199
Target Start/End: Complemental strand, 26252254 - 26252116
Alignment:
Q  74 tttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaag 160  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||    |||| | | |         |||||||||||||||| |||||||| |||    
T  26252254 tttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagtatttattaagggtaaagttggaagaaaaaaatttaag 26252155  T
Q  161 ttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26252154 ttgtattggaaatgtaaagtgacattcattttgaaacaa 26252116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 70 - 241
Target Start/End: Complemental strand, 22665075 - 22664897
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaag 160  Q
    |||||||||||||| |||||||| ||||||||| ||| ||||||||| |||| ||| ||| |         |||||||||||||||| ||  |||||| |    
T  22665075 ttactttataagaacaagacaaacttaaagttgaattaaaaattgtgagagagaagttggagtatttattgagggtaaagttggaagaaattaattaacg 22664976  T
Q  161 ttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||||||  ||||||||||||| |||||||    
T  22664975 ttgtattggaaatgtaaagtgacattcattttgaaacaa--ttttttagctaaagtgatgctcattttgaaactgagggag 22664897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 43105562 - 43105667
Alignment:
Q  16 attaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 115  Q
    ||||||||||||||| ||||||| ||| || ||||||||||||| ||| | || ||| ||||||||||||||||||| ||||| |||||||||||||||     
T  43105562 attaagaaattgaatgaaataatcattagacataacacttttactaaattaccattattttataagaaaaagacaaacttaaaattgcattgaaaattgc 43105661  T
Q  116 gtgaga 121  Q
    ||||||    
T  43105662 gtgaga 43105667  T

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Target: chr1; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 12851870 - 12851739
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtgtga--gaaaag---------atggggagggtaaagttggaaggaaaaaattaaagttgtatt 167  Q
    |||||||||||||||||||||||||||| |||||||| |||  ||||||         ||   |||||||||||||| || |||||||||||||| ||||    
T  12851870 aagaaaaagacaaaattaaagttgcattaaaaattgtatgaatgaaaagtttgagtatatattgagggtaaagttgggagaaaaaaattaaagttctatt 12851771  T
Q  168 ggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||||||||||||||||||    
T  12851770 ggaaatgtaaagtgacattcattttgaaacaa 12851739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 49 - 234
Target Start/End: Complemental strand, 43755187 - 43755016
Alignment:
Q  49 aacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaagg 148  Q
    ||||||||||| |||  ||| |||||| |||||||||||||||| |||||||||  ||||||||||||||||| ||             ||||||||||     
T  43755187 aacacttttactaaatcgcccttacttaataagaaaaagacaaacttaaagttgttttgaaaattgtgtgagagaa-------------aagttggaag- 43755102  T
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacg 234  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| ||         ||||||||||||||||||||||||||    
T  43755101 aaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttgaaataattttttttggctaaagtgacactcattttgaaacg 43755016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 44024611 - 44024501
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttga 230  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||| | |||||||||||||||||         ||||||| |||||||||||| |    
T  44024611 gagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcggcattcattttgaaacaatttttttttgctaaagcgacactcattttaa 44024512  T
Q  231 aacggagggag 241  Q
    |||||||||||    
T  44024511 aacggagggag 44024501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 44583968 - 44583769
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||||||||||| ||| || |||||| |||| | |||||||||| | ||||||||||||||||||| |||| ||||||||||||    
T  44583968 cacaaattaagaaatgaaataaaataatcattagacataacaattttcctaaactgcctt-attttataagaaaaagacaaacttaatgttgcattgaaa 44583870  T
Q  111 attgtgtg--agaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    | | ||||  ||||||| | | |         ||||||||||  |||| |||||||||||||||||||  |||||||| |||||||||||||| ||||||    
T  44583869 actatgtgaaagaaaagttagagtacttattaagggtaaagtcagaagaaaaaaattaaagttgtattaaaaatgtaaggtgacattcattttaaaacaa 44583770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 45377236 - 45377301
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  45377236 gagggtaaagttgggagaaaaaaagtaaagttgtattggaaatgtaaagtgacattcattttgaaa 45377301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 43738214 - 43738408
Alignment:
Q  16 attaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 115  Q
    ||||||||||  ||||||||||||||| || |||| | |||||| ||||| |||||||||||||||||||||| |||  ||||||| | ||||||||||     
T  43738214 attaagaaatgaaataaaataattattagacataatatttttactaaactacctttactttataagaaaaagataaatataaagttactttgaaaattgc 43738313  T
Q  116 gtg--agaaaagatg---------gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||  ||||||  ||           ||| ||||||||| ||| |||||||| ||||||||||| |||||| |||||||||||||||| ||||||    
T  43738314 gtgaaagaaaaattgaagtatttattgagagtaaagttgaaagaaaaaaatttaagttgtattgaaaatgtgaagtgacattcattttaaaacaa 43738408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 49894920 - 49894807
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattgg 169  Q
    |||||||||||||| |||||||| |||||||| ||||||||||||||||||| ||             ||||| |||| |||||||||||||||||||||    
T  49894920 ttactttataagaataagacaaacttaaagttacattgaaaattgtgtgagagaa-------------aagttagaagaaaaaaattaaagttgtattgg 49894834  T
Q  170 aaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||| | |||||||||||||||    
T  49894833 aaatgtaaaataacattcattttgaaa 49894807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 5854215 - 5854381
Alignment:
Q  47 ataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtga----gaaaagatgg---------ggag 133  Q
    |||||| |||||| ||| |  ||||||||||||||||||||||||  |||| |||||||||||||||||||||    |||||| |||          |||    
T  5854215 ataacaattttactaaaataactttactttataagaaaaagacaaccttaaggttgcattgaaaattgtgtgagatcgaaaagttggagtatttattgag 5854314  T
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    | |||||||||||  ||||||||||||||| ||||||||||||||| |||||| ||| |||||||||    
T  5854315 gataaagttggaataaaaaaattaaagttgcattggaaatgtaaagcgacatttattctgaaacaaa 5854381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 48319992 - 48320144
Alignment:
Q  47 ataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaat-tgtgtgagaaaagatggggagggtaaagttgga 145  Q
    |||| |||||||| ||| |||| ||||||||||| | ||||||||| |||||||||||| |||| | |||| |||| ||  ||| ||| |||||||| ||    
T  48319992 ataagacttttactaaattgcccttactttataaaagaaagacaaacttaaagttgcatcgaaattgtgtgagagataaattggagagagtaaagtt-ga 48320090  T
Q  146 aggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    | |||||||||||| |||||||| |||| |||||| ||||| ||||| ||||||    
T  48320091 aagaaaaaattaaatttgtattgaaaatataaagtaacatttattttaaaacaa 48320144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 15647150 - 15647264
Alignment:
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaa 231  Q
    ||||||||||||| || ||||||  ||| |||||||| ||||||||||||||||||||||||||||||         |||||||||||||||||| ||||    
T  15647150 agggtaaagttgggagaaaaaaa--aaatttgtattgaaaatgtaaagtgacattcattttgaaacaatttttttttgctaaagtgacactcattatgaa 15647247  T
Q  232 acggagggagcaacttt 248  Q
    | |||||||| ||||||    
T  15647248 atggagggagtaacttt 15647264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 15698841 - 15698949
Alignment:
Q  135 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnna--gctaaagtgacactcattttgaaa 232  Q
    ||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||| ||||||           ||||||||||||||||||||||||    
T  15698841 gtaaagttggaagaagaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaatttttttttttgctaaagtgacactcattttgaaa 15698940  T
Q  233 cggagggag 241  Q
    |||| ||||    
T  15698941 cggatggag 15698949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 45749470 - 45749554
Alignment:
Q  27 gaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaa 111  Q
    |||||||||||| ||| || ||||||||||||| |||| ||| ||||||||||||||||||||||| ||||| || |||||||||    
T  45749470 gaataaaataatcattagacataacacttttactaaaccgcccttactttataagaaaaagacaaacttaaatttacattgaaaa 45749554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 2245982 - 2245791
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||| |||| || |||| |||  | |||| | |||||| |||||| | || |||||||||||||||||||| |||||| |||||||||||||    
T  2245982 agattaagaaatggaatgaagtaatcattaaacataatatttttactaaactgtcattcctttataagaaaaagacaaacttaaagatgcattgaaaatt 2245883  T
Q  114 gt----gtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||    | |||||||| | |          ||||||||||||| ||| |||| ||||||||||||||| |||||||| ||||||||||||||    
T  2245882 gtgaaagagagaaaagtttgagtatttattgagggtaaagttgaaagaaaaagattaaagttgtattgaaaatgtaaggtgacattcatttt 2245791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 50158392 - 50158458
Alignment:
Q  131 gagggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||| |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||    
T  50158392 gaggttaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 50158458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 15698705 - 15698905
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctt-tactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| |||||| |||  ||| ||||||| ||| || |||||||||| |  ||||| || | |||||||||||||||||| ||| ||||||||  ||||||    
T  15698705 cacaaattaaggaataaaattaaataatcattagacataacactttaaataaactaccatgtactttataagaaaaagataaacttaaagttctattgaa 15698804  T
Q  110 aat--tgtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||  |||| |||||||| | |          ||| ||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  15698805 aattatgtgagagaaaagtttgagtatttattgagagtaaagttggaagaagaaaattaaagttgtattggaaatataaagtgacattcattttaaaaca 15698904  T
Q  199 a 199  Q
    |    
T  15698905 a 15698905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 26582985 - 26582923
Alignment:
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  26582985 aaagttcgaagaaaaaaattaaagttgtattggaaatgtaaagtaacatttattttaaaacaa 26582923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 28200236 - 28200379
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||    |||| ||| |         |||||||||||||||| ||||||||    
T  28200236 ttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgcgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaatt 28200335  T
Q  157 aaagttgta-ttggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||| | ||| ||||||| || |||||||||||||||||||    
T  28200336 aaagttgcatttgaaaatgtagagcgacattcattttgaaacaa 28200379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 40719078 - 40719020
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||    
T  40719078 ggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaattgacattcatttt 40719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 197
Target Start/End: Original strand, 42650267 - 42650402
Alignment:
Q  74 tttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag---aaaagatg---------gggagggtaaagttggaaggaaaaaattaaagt 161  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||   ||||| ||           || ||||||| |||||| |||||||||||||    
T  42650267 tttataagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagaaaaagttgaagtatttcttgaaggtaaagctggaagaaaaaaattaaagt 42650366  T
Q  162 tgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    |||||| ||||||||||| |||||| ||||| ||||    
T  42650367 tgtattagaaatgtaaagcgacatttattttaaaac 42650402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 9552436 - 9552484
Alignment:
Q  151 aaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  9552436 aaaattaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 9552484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 11134548 - 11134614
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||| ||||||||||  || |||||||||||| |||| |||||||||||||||||||||||||||||    
T  11134548 gagggcaaagttggaaa-aagaaattaaagttgcattgaaaatgtaaagtgacattcattttgaaaca 11134614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 672300 - 672346
Alignment:
Q  75 ttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  672300 ttataagaaaaagacaaacttaaatttgcattgaaaattgtgtgaga 672346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 52403542 - 52403482
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattt 191  Q
    ||||||||||||||||   |||| |||||||||||||| |||| |||||||||||||||||    
T  52403542 gagggtaaagttggaatagaaaacttaaagttgtattgaaaatttaaagtgacattcattt 52403482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 9552369 - 9552420
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||||||||||||| |||||||  |||||||||||||||||||| |||||||    
T  9552369 ttactttataagaacaagacaatcttaaagttgcattgaaaattatgtgaga 9552420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 35149394 - 35149436
Alignment:
Q  71 tactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  35149394 tactttataagaaaaagataaaattaaagttgcattgataatt 35149436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 35149485 - 35149535
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||||||||||| |||||||| ||| |||| |||||||    
T  35149485 aaaaaattaaagttgtattggaaatataaagtgaaatttatttcgaaacaa 35149535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 50591388 - 50591446
Alignment:
Q  137 aaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||  ||||||||||||||    
T  50591388 aaagttggaagaaaaaaaattaaagttgtattggtaatgtaaaacgacattcattttga 50591446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 672397 - 672463
Alignment:
Q  175 taaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||| |||||||        |||||||||||||||||||| ||||||||||||    
T  672397 taaagtgacattcattttaaaacaaatttttttggctaaagtgacactcattttaaaacggagggag 672463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 6332229 - 6332164
Alignment:
Q  135 gtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||| ||| |||||| |||||||||| ||  ||||||||||||||||||||||| ||||||    
T  6332229 gtaaagttgaaagaaaaaaaattaaagttgtgttaaaaatgtaaagtgacattcattttaaaacaa 6332164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 30685543 - 30685482
Alignment:
Q  180 tgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||| |||||||    
T  30685543 tgacattcattttgaaacaaattatttttgctaaagtgacactcattttgaaacagagggag 30685482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 9333168 - 9333105
Alignment:
Q  137 aaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| |||||| ||||| ||||||| |||||||||||| ||||| ||||| ||||||    
T  9333168 aaagttggaagaaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9333105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 9356941 - 9356878
Alignment:
Q  137 aaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| |||||| ||||| ||||||| |||||||||||| ||||| ||||| ||||||    
T  9356941 aaagttggaagaaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9356878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 241
Target Start/End: Complemental strand, 50158263 - 50158232
Alignment:
Q  210 ctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||||||||||||||||||||||||||||    
T  50158263 ctaaagtgacactcattttgaaacggagggag 50158232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 50158276 - 50158342
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataa 80  Q
    ||||||||||||  |||  |||||| |||||||||||||||||||| ||||| || || ||||||||    
T  50158276 agattaagaaatataatgcaataatcattggatataacacttttactaaacttcccttgctttataa 50158342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 50591336 - 50591381
Alignment:
Q  74 tttataagaaaaagacaaaattaaagttgcattgaaaattgtgtga 119  Q
    |||||| ||| |||||||| ||||| ||||||||||||||||||||    
T  50591336 tttataggaacaagacaaacttaaaattgcattgaaaattgtgtga 50591381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 2459212 - 2459244
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  2459212 gctaaagcgacactcattttgaaacggagggag 2459244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 43105692 - 43105728
Alignment:
Q  156 taaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  43105692 taaagttgtattgaaaatgtaaggtgacattcatttt 43105728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 106; Significance: 1e-52; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 12040 - 12219
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||| ||| |||| ||||||| ||| || ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  12040 agattaaggaatggaatgaaataatcattagacataacacttttactaaactgcctt-actttataagaaaaagacaaacttaaagttgcattgaaaatt 12138  T
Q  114 gtgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||||||||  |||| | | ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  12139 gtgtgagagaaaagtttgagagggtaaagttggaagaaaaaaattaaagttatattggaaatgtaaaatgacattcatttt 12219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 12028 - 11996
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  12028 gctaaagcgacactcattttgaaacggagggag 11996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 4e-49; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 1924634 - 1924860
Alignment:
Q  16 attaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 115  Q
    ||||||||||  ||| ||||||| ||||||||||||  |||||| ||||| |  |||||||||||| |||| ||||||||||||||||||||||||||||    
T  1924634 attaagaaatataatgaaataatcattggatataacgtttttactaaacttctcttactttataaggaaaatacaaaattaaagttgcattgaaaattgt 1924733  T
Q  116 gt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaa 213  Q
    ||  |||||||| ||| |||||| ||||| |||  |||||||||||||||||||| ||||||||| ||||||||||||| |||||||        |||||    
T  1924734 gtgagagaaaagttggagagggtgaagtt-gaaaaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttaaaacaaatttttttggctaa 1924832  T
Q  214 agtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||| |||||||    
T  1924833 agtgacactcattttgaaacagagggag 1924860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 29915740 - 29915496
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcc-tttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| ||||||||||||||| ||||||| ||| || ||||||||||||| |||||||| ||||||||||||||||||||||||  ||||||||||||| |    
T  29915740 cacatattaagaaattgaatgaaataataattagaaataacacttttactaaactgccatttactttataagaaaaagacaaacataaagttgcattgga 29915641  T
Q  110 aattgtgt--gagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||||||||  |||||||| |||          |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29915640 aattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 29915541  T
Q  198 aaannnnnnnag-ctaaagtgacactcattttgaaacggagggag 241  Q
    ||         | ||||||||||||||||||||||||||| ||||    
T  29915540 aatttttttttgactaaagtgacactcattttgaaacggatggag 29915496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 32 - 199
Target Start/End: Original strand, 12828657 - 12828835
Alignment:
Q  32 aaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaagatg- 128  Q
    ||||||| ||| || ||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||  |||||||| ||     
T  12828657 aaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattgtgtgagagaaaagttga 12828756  T
Q  129 --------gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
              ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12828757 agtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgaaattcattttgaaacaa 12828835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 26669056 - 26669247
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaat- 112  Q
    ||||||||||||  ||| ||||||||||||||||||||  |||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||     
T  26669056 agattaagaaatataatgaaataattattggatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 26669155  T
Q  113 -tgtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
     |||| |||||||| |||          |||| |||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||    
T  26669156 atgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaagttgtattggaaatataaagtgacattcattttga 26669247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 23936538 - 23936778
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcc-tttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| |||||||||| |||| ||||||| ||| ||||||||| ||||||  || |||| |||||||||||||||||| ||||| ||||||||||||||||    
T  23936538 cacatattaagaaatggaatgaaataatcattagatataacatttttactgaattgccctttactttataagaaaaaaacaaatttaaagttgcattgaa 23936637  T
Q  110 aattgtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||||||| |||||| | |||          ||||||||||||||||| ||||||| ||||||| |||| ||||||||||| |||||||||||||||||      
T  23936638 aattgtgagagaaaggttggagtatatattgagggtaaagttggaagaaaaaaatgaaagttgcattgaaaatgtaaagtaacattcattttgaaacagt 23936737  T
Q  201 nnnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
            ||||||||||||||||||||||||| |||||||    
T  23936738 ttttttttgctaaagtgacactcattttgaaacagagggag 23936778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 48 - 241
Target Start/End: Original strand, 31275633 - 31275838
Alignment:
Q  48 taacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga--tgggg---------agggt 136  Q
    ||||||||||||||||||||| ||  |||||| |||||||||||| ||||||||||||||||||||||||||||||| |  ||| |         |||||    
T  31275633 taacacttttaccaaactgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgagggt 31275732  T
Q  137 aaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacgg 235  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||         ||||||| |||||| ||||||||||||    
T  31275733 aaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaatttttttttgctaaagcgacacttattttgaaacgg 31275832  T
Q  236 agggag 241  Q
    | ||||    
T  31275833 atggag 31275838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 29927405 - 29927205
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||| |||| |||| ||||||| ||| || ||||||||||||| ||  |  | ||||||||||||||||||||||| |||||||||||||||||    
T  29927405 cacagattaaaaaatagaatgaaataatcattagacataacacttttactaacatatccttactttataagaaaaagacaaacttaaagttgcattgaaa 29927306  T
Q  111 attg--tgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    | |   || |||||||| ||| |         |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29927305 actacatgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 29927206  T
Q  199 a 199  Q
    |    
T  29927205 a 29927205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 32258910 - 32258720
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| || | ||||||| |||||||||||| ||||||| |||||||| || ||||||||           |||||||||||||||||||    
T  32258910 cacagattaagaaatcgattgaaataatcattggatataacgcttttactaaactgcccttgctttataa-----------aattaaagttgcattgaaa 32258822  T
Q  111 attgtgtgaga---aaagatgggg----------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    |||||||||||   |||| ||| |          ||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32258821 attgtgtgagagaaaaagttggagtattttttttaggttaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaac 32258722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 11785057 - 11785255
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaa-gacaaaattaaagttgcattgaa 109  Q
    |||| ||||| ||||  ||||||||| ||||| || ||||||||||||  |||||| ||||| ||||||| ||||| || ||| ||||||||| ||||||    
T  11785057 cacacattaaaaaataaaataaaatagttattagacataacacttttattaaactgtctttattttataataaaaaagataaatttaaagttgtattgaa 11785156  T
Q  110 aattgtgtgaga--aaagatggg---------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||||||||||  |||| | |          ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11785157 aattgtgtgagagaaaagttagaatatttattgagggtaaagttggaag-aaaaaattaaagttgtattggaaatgtaaagtgaca-tcattttgaaaca 11785254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 17345148 - 17345290
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||||| |||||||| || |||||||||||||||||||||||||    |||| ||| |         |||||||||||||||| |||| |||    
T  17345148 ttactttataagaacaagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaatatt 17345247  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||    
T  17345248 aaagttgtattagaaatgtaaagtgatattcattttaaaacaa 17345290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 4123941 - 4124009
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  4123941 gagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttgaaacaa 4124009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 47 - 199
Target Start/End: Complemental strand, 34576707 - 34576542
Alignment:
Q  47 ataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------ag 133  Q
    |||||| |||||| ||| |  |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||    |||| ||  |         ||    
T  34576707 ataacaattttactaaaataactttactttacaagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgag 34576608  T
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    | |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  34576607 gataaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 34576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 6143147 - 6143082
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  6143147 ggtaaagttggaagaaaaaaattaaagttgaattggaaatgtaaaatgacattcattttaaaacaa 6143082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 34439368 - 34439567
Alignment:
Q  16 attaagaaattgaataaaataattattggatataacacttttaccaaactgcc-tttactttataagaaaaagacaaaattaaagttgcattgaaaattg 114  Q
    ||||||||||  ||| ||||||| ||| ||||||||| |||||  ||| |||| |||| |||||||||||||||||||  ||||||||||||| ||||||    
T  34439368 attaagaaatgaaatgaaataatcattagatataacatttttattaaattgccctttattttataagaaaaagacaaacataaagttgcattggaaattg 34439467  T
Q  115 tgt--gagaaaaga-----tgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||  |||||||||     ||| |         | |||||||||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||||||    
T  34439468 tgtaagagaaaagaaaagttggagtatatattgaaggtaaagttggaag-aaagaatgaaagttgtattggaaatgtaaaatgacattcattttgaaaca 34439566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 4132061 - 4132129
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  4132061 gagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 4132129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 30627157 - 30627056
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttga 230  Q
    |||||||||||||  || |||||||||||||||||||| |||| |||||||||||| |||||||||||||       ||||||||||||||||||| |||    
T  30627157 gagggtaaagttgagagaaaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaacaaa-ttttttagctaaagtgacactcattatga 30627059  T
Q  231 aac 233  Q
    |||    
T  30627058 aac 30627056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 6140662 - 6140598
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  6140662 ggtaaagttggaag-aaaaaattaaagttgaattggaaatgtaaagcgacattcattttaaaacaa 6140598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 26189574 - 26189464
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttga 230  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||   ||||||||||||||||||         | ||||| ||||||||||||||    
T  26189574 gagggtaaagttggaagaaaaatattaaagttgcattggaaatgtaaaacaacattcattttgaaacaattttttttggttaaagcgacactcattttga 26189475  T
Q  231 aacggagggag 241  Q
    |||||| ||||    
T  26189474 aacggatggag 26189464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 10494854 - 10494916
Alignment:
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  10494854 aaagttgaaagaaaaaaattaaagttgaattggaaatgtaaactgacattcattttaaaacaa 10494916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 3015964 - 3015919
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  3015964 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttga 3015919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 8052410 - 8052343
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||| |||| || ||||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  8052410 gagggtaaaattgggag-aaaaaattaaagttgtattagaaatataaagtgacattcattttaaaacaa 8052343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 4131903 - 4132008
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||| ||||||| |||  |||||||| |||||| ||||| |||||| |||||||||||||   |||| | || |||||||||||    
T  4131903 cacatattaagaaataaaattaaataatcattatatataacatttttactaaactacctttattttataagaaaaa---aaaacttaaattgcattgaaa 4131999  T
Q  111 attgtgtga 119  Q
    |||||||||    
T  4132000 attgtgtga 4132008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 10494760 - 10494827
Alignment:
Q  55 tttaccaaactgcctttactttataagaaaa-agacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||| ||||| || |||||||||||||||| ||||||| || ||||||||||||||||||| |||||    
T  10494760 tttactaaactacccttactttataagaaaaaagacaaactttaagttgcattgaaaattgtatgaga 10494827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 30626918 - 30626867
Alignment:
Q  148 gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||||||| ||||||||||| | ||| ||||||||||||    
T  30626918 gaaaaaattaaagttgtattgaaaatgtaaagtaatatttattttgaaacaa 30626867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 19689927 - 19689989
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||| ||| |  |||||||||||| |||||||||||| ||||||||||| |||||||    
T  19689927 taaagttggaagaaaata--taaagttgtattagaaatgtaaagtaacattcattttaaaacaaa 19689989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 26189649 - 26189600
Alignment:
Q  70 ttactttataagaaaaaga-caaaattaaagttgcattgaaaattgtgtg 118  Q
    ||||||||||||||||| | |||| |||||||||||||||||||||||||    
T  26189649 ttactttataagaaaaaaaacaaacttaaagttgcattgaaaattgtgtg 26189600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 25932769 - 25932718
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||||||||  || |||||||| |||||||| |||||||||||||||||||    
T  25932769 ttactttatagcaacaagacaaacttaaagttacattgaaaattgtgtgaga 25932718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 199
Target Start/End: Complemental strand, 19416887 - 19416857
Alignment:
Q  169 gaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||||||||||||||||||    
T  19416887 gaaatgtaaagtgacattcattttgaaacaa 19416857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 6992541 - 6992508
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgc 103  Q
    ||||||||||||||||||||||| ||||||||||    
T  6992541 ttactttataagaaaaagacaaacttaaagttgc 6992508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 19689809 - 19689858
Alignment:
Q  18 taagaaattgaataaaataattattggatataacacttttaccaaactgc 67  Q
    |||||||| |||| ||||||||||| ||||||||| |||||| |||||||    
T  19689809 taagaaatggaatgaaataattattagatataacaattttactaaactgc 19689858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 30627220 - 30627184
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgt 115  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  30627220 aagaaaaaaacaaatttaaagttgcattgaaaattgt 30627184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 9e-47; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 1774084 - 1774256
Alignment:
Q  69 tttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattg 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | | ||| ||||||||||||| ||||||||||||||||||||    
T  1774084 tttactttataagaaaaagacaaaattaaagttgcattgaaaattgtaagagaaaagttagagagcgtaaagttggaagaaaaaaattaaagttgtattg 1774183  T
Q  169 gaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
     ||||||||| ||||||||||||| ||||||         |||||||||||||||||||| ||||||| ||||    
T  1774184 aaaatgtaaattgacattcattttaaaacaattttttttggctaaagtgacactcattttaaaacggaaggag 1774256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 32 - 247
Target Start/End: Complemental strand, 22601311 - 22601086
Alignment:
Q  32 aaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga-aaagatggg 130  Q
    ||||||| ||| || ||||| ||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| | ||    
T  22601311 aaataatcattagacataactcttttactaaattgtctttactttataagaaaaagacaaacttaaagttgcattgaaaattctgtgagagaaaggttgg 22601212  T
Q  131 ----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgaca 220  Q
              ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||    
T  22601211 agtatttatcgagggtaaagttggaag-aaacaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaaactttttggctaaagtgaca 22601113  T
Q  221 ctcattttgaaacggagggagcaactt 247  Q
    ||||| ||||||||||||||| |||||    
T  22601112 ctcatcttgaaacggagggagtaactt 22601086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 7612694 - 7612454
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| |||| ||||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7612694 cacagattaagaaatagaatgaaataatcattggatataacgcttt-actaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 7612596  T
Q  111 attgtgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||  |||||||| ||| |         ||||||||||||||||  |||| |||| ||||||||| ||||||||||||||||||||||| ||||||    
T  7612595 attgtgtgagagaaaagttggagtatttatttagggtaaagttggaagagaaaacttaatgttgtattgaaaatgtaaagtgacattcattttaaaacaa 7612496  T
Q  200 annnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
             | |||||||||||||||||| ||| ||||||||    
T  7612495 tttttttttgttaaagtgacactcattttaaaagggagggag 7612454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 40 - 233
Target Start/End: Original strand, 29931225 - 29931419
Alignment:
Q  40 attggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaat--tgtgtgagaaaagatggggagggta 137  Q
    |||| ||||||||||||||  |||||||||||| ||||||||| ||||| |||||||||||||||||||||||  |||| |||||||| | | ||| |||    
T  29931225 attgaatataacacttttattaaactgcctttattttataagagaaagaaaaaattaaagttgcattgaaaattatgtgagagaaaagtttgagagagta 29931324  T
Q  138 aagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaac 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||| ||||| |||| ||        |||||||||||||||||||||||||    
T  29931325 aagttagaagaaaaaaattaaagttgtattggaaatgtaaagtgatatttattttaaaac-aattttttttgctaaagtgacactcattttgaaac 29931419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 27109775 - 27109976
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgccttt-actttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| |||||||||| |||| ||||||| ||| |||||||||||||||| ||| || |||| |||||||||||||| |||||| |||||||||||||| |    
T  27109775 cacatattaagaaatagaatgaaataatcattagatataacacttttactaaattgtcttttactttataagaaaaggacaaacttaaagttgcattgga 27109874  T
Q  110 aattgtgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||||||||||  |||| | | |         |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27109875 aattgtgtgagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatggaaagtgacattcattttgaaaca 27109974  T
Q  199 aa 200  Q
    ||    
T  27109975 aa 27109976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 38329010 - 38329226
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| ||| |||| ||||||| ||| || ||||||||||||| |||||||||| |||||||||  |||||||||| |||||||||||||||||    
T  38329010 cacagattaaggaatggaatgaaataatcattagacataacacttttactaaactgcctt-actttataatcaaaagacaaacttaaagttgcattgaaa 38329108  T
Q  111 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagc 210  Q
    |||||||             ||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||||||||| |||||||         |    
T  38329109 attgtgt-------------gagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatataaagtgacattcattttaaaacaaatttttttgac 38329195  T
Q  211 taaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||||||||| ||||    
T  38329196 taaagtgacactcattttgaaacggaaggag 38329226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 45187251 - 45187440
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||| ||||||| ||| || || |||||||||| |||||| | ||  ||||||||||||||||||| |||||||||| ||||||    
T  45187251 cacagattaaggaatataatgaaataatcattagacatgacacttttactaaactgtccttgttttataagaaaaagacaaacttaaagttgctttgaaa 45187350  T
Q  111 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||| |||||||| | | |||| ||| |||  ||| |||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  45187351 attgtgagagaaaagttagagaggataatgttaaaagaaaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaacaaa 45187440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 18666534 - 18666717
Alignment:
Q  45 atataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttgg 144  Q
    ||||||||||||||| |||||| | |||||||||||||||||||||| | |||||||||||| ||||||||||||||             | ||||||||    
T  18666534 atataacacttttactaaactgtccttactttataagaaaaagacaacactaaagttgcattaaaaattgtgtgaga-------------gaaaagttgg 18666620  T
Q  145 aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||| |||||| |||||||| |||||||||||||||||||||||||||||||| ||         |||||||||| ||||||||||||||||||||||    
T  18666621 aagaaaaaaactaaagttgcattggaaatgtaaagtgacattcattttgaaagaatttttttttgctaaagtgatactcattttgaaacggagggag 18666717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 9022593 - 9022351
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaa-gttgcattgaa 109  Q
    |||||||||| |||| |||| || |||| ||| || ||||||||||||| |||||||  ||  |||||| |||||||||||| ||||| |||||||||||    
T  9022593 cacagattaaaaaatggaatgaattaatcattagacataacacttttactaaactgcacttgttttatatgaaaaagacaaacttaaaagttgcattgaa 9022494  T
Q  110 aattgtgtgagaaaaga--tgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||||||||||||| |  ||| |         |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  9022493 aattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaacgtaaagtgacattcattttaaaaca 9022394  T
Q  199 aannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |         |||||| ||| ||||||||| ||||||||||||    
T  9022393 attctttttggctaaaatgatactcattttaaaacggagggag 9022351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 34 - 236
Target Start/End: Complemental strand, 7129451 - 7129262
Alignment:
Q  34 ataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggag 133  Q
    ||||| |||| ||||||| ||||||| ||||||  ||||||||||||||| ||||||||||||||||||||||| |||||||||||||                
T  7129451 ataatcattgaatataacgcttttactaaactgattttactttataagaataagacaaaattaaagttgcattggaaattgtgtgaga------------ 7129364  T
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaac 233  Q
     | ||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| ||         | |||||||||||||||||||||||    
T  7129363 -gaaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagtgacattcattttgaaataatttttttttgttaaagtgacactcattttgaaac 7129265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 34168226 - 34168355
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga-----tggggagggtaaagttggaaggaaaaaattaaagttgt 164  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||     |   ||||||||||||||||| ||||| ||||||||||    
T  34168226 ttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaagagtatttcttgagggtaaagttggaagaaaaaagttaaagttgt 34168325  T
Q  165 attggaaatgtaaagtgacattcattttga 194  Q
    |||| |||||||||||||||||||||||||    
T  34168326 attgaaaatgtaaagtgacattcattttga 34168355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 70 - 241
Target Start/End: Complemental strand, 8471397 - 8471237
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattgg 169  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |           | ||||||||||| ||||||||||||||| |||||    
T  8471397 ttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga-----------gaaaagttggaagaaaaaaattaaagttgcattgg 8471309  T
Q  170 aaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||| |||||||||||||||||||         ||||||| | |||||||||||||||||||||||    
T  8471308 aaatgtaaagcgacattcattttgaaacaattttttttggctaaagcggcactcattttgaaacggagggag 8471237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 47 - 196
Target Start/End: Complemental strand, 16209102 - 16208951
Alignment:
Q  47 ataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatggggagggtaaagttgg 144  Q
    ||||||||||||  || ||| | ||| |||||| |||||||||||| |||||||||||||||||||| |||||||  |||| ||  ||||||||| ||      
T  16209102 ataacacttttattaatctgtccttattttataggaaaaagacaaacttaaagttgcattgaaaattatgtgagagaaaagttgtagagggtaaaattta 16209003  T
Q  145 aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16209002 aagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 16208951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 36915561 - 36915365
Alignment:
Q  12 acagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaa 111  Q
    |||||||||| ||| |||| ||||||| ||| || |||| | |||||| ||| |||| ||  |||||| |||||||||||| ||||||||||||||||||    
T  36915561 acagattaaggaatggaatgaaataatcattagacataatatttttactaaattgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaaa 36915462  T
Q  112 ttgtgtgagaaaagatggg---------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||| || ||||  | |          || |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36915461 ttgtgagaaaaaatgttgaatatttattgaaggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 36915365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 6839404 - 6839215
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||| |||| |||| ||||||| ||| || ||||||||||||| ||| ||||||||||||||||||||||||||||  |||| |||||||||||    
T  6839404 cacagattaaaaaatggaatgaaataatcattagacataacacttttactaaattgcctttactttataagaaaaagacaaacataaaattgcattgaaa 6839305  T
Q  111 at--tgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||  |||| |||||||| |||  | | |||||||  ||  |||||||||||||| | ||  ||||||||||| | ||||||||| ||||||    
T  6839304 attatgtgagagaaaagttggaaatgataaagtt-aaaaaaaaaaattaaagttattttaaaaatgtaaagtaaaattcattttaaaacaa 6839215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 2067894 - 2067788
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||| |||| ||||||| ||| |||||||| ||||||  |||||||| |||||||||||| ||||||| |||||||||||||||| ||||||    
T  2067894 agattaagaaatggaatgaaataatcatttgatataacgcttttattaaactgcccttactttataaggaaaagaccaaattaaagttgcattaaaaatt 2067795  T
Q  114 gtgtgag 120  Q
    |||||||    
T  2067794 gtgtgag 2067788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 78 - 241
Target Start/End: Original strand, 2803268 - 2803433
Alignment:
Q  78 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaagg---aaaaaattaaagttgtattggaaatg 174  Q
    ||||||||||||||| ||||||||| |||||||||||||  ||| || |   ||||||||||||||| |||   ||||||||||| |||||||| |||||    
T  2803268 taagaaaaagacaaacttaaagttgaattgaaaattgtgcaagagaaaagttggagggtaaagttgggagggagaaaaaattaaaattgtattgaaaatg 2803367  T
Q  175 taaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||| |||||||||||||       ||||||| ||||||||||| ||||||||| ||||    
T  2803368 taaagtgacatttattttgaaacaaa-ttttttagctaaaatgacactcattatgaaacggatggag 2803433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 14541760 - 14541900
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaa 158  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||| ||||  |||| ||  |         ||| |||||||||||| ||||||||||    
T  14541760 ttactttataagaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaagttgaagtatttattaaggataaagttggaagaaaaaaattaa 14541859  T
Q  159 agttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  14541860 agttgtattagaaatgtaaagtgacattcattttgaaacaa 14541900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 68 - 241
Target Start/End: Complemental strand, 26439104 - 26438932
Alignment:
Q  68 ctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgt 164  Q
    ||||||||||||| |||||  |||| ||||||||||||||||||||||||  |||||||| | | |||| ||||||||||||  ||||||||||||||||    
T  26439104 ctttactttataacaaaaa--caaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagaggataaagttggaagaaaaaaaattaaagttgt 26439007  T
Q  165 attggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    | ||||||||||||||| |||||||||| ||| |||         |||||||||||||||| |||||||||||||||    
T  26439006 a-tggaaatgtaaagtggcattcattttaaaataaattttttg-cctaaagtgacactcatgttgaaacggagggag 26438932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 32326680 - 32326875
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||| ||||||| ||| ||  |||||||||||| |||||||| ||  |||||| |||||||||||| |||||||||||||||||    
T  32326680 cacagattaaggaatgaaatgaaataatcattagacgtaacacttttactaaactgcccttgttttatatgaaaaagacaaatttaaagttgcattgaaa 32326779  T
Q  111 attgtgtgagaaaagatgggga-----------gggtaaagttggaagg-aaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
    |||||||||||||| |   |||           ||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  32326780 attgtgtgagaaaaaagttggagtatttattgtgggtaaaattgaaaggaaaaaaattaaagttgtattgaaaatgtaaagtgacatttattttga 32326875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 156358 - 156239
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 178  Q
    ||||||| |||||| ||||||||| ||||||||||||| |||| || | | |||  |||||||||| || |||||||||||||| |||||| ||||||||    
T  156358 aagaaaaggacaaacttaaagttgtattgaaaattgtgcgagagaaaa-gtggaaagtaaagttgggagaaaaaaattaaagttatattgggaatgtaaa 156260  T
Q  179 gtgacattcattttgaaacaa 199  Q
    |||||||||||||||||||||    
T  156259 gtgacattcattttgaaacaa 156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 30789111 - 30788934
Alignment:
Q  32 aaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaat--tgtgtgagaaaagatgg 129  Q
    ||||||| ||| || ||||||||||||  ||| || | ||||||||||||||||||||||| ||||||||| |||||||||  |||| |||||||| |||    
T  30789111 aaataatcattagacataacacttttattaaattgtccttactttataagaaaaagacaaatttaaagttgtattgaaaattatgtgagagaaaagttgg 30789012  T
Q  130 gg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
     |         ||||||||||| |||| |||||||||||||||||||| | ||||||||||||||| ||||| |||||    
T  30789011 agtatttactaagggtaaagttagaagaaaaaaattaaagttgtattgaatatgtaaagtgacatttattttaaaaca 30788934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 11257736 - 11257540
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||||||| |||| |||||||||||  | | |||| |||||| ||||| |||||| ||||||||||| ||||||| |||||||||||||||||    
T  11257736 cacaaattaagaaatggaatgaaataattattaaaaa-aacatttttactaaactacctttattttataagaaacagacaaacttaaagttgcattgaaa 11257638  T
Q  111 attgtgt--gagaaaagatg---------gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||  |||||||| ||           |||  ||||||||||||  ||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  11257637 attgtgtgagagaaaagttgaagtatttattgagattaaagttggaag--aaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 11257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 34461596 - 34461737
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaa-aat 155  Q
    |||||||| | ||| |||||||| ||||||||||||||||||||||||||||    |||| ||| |         |||||||||||||||| |||| |||    
T  34461596 ttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtttttattgagggtaaagttggaagaaaaaaaat 34461695  T
Q  156 taaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34461696 taaagttgtattggaaatgtaaagtgacattcattttgaaac 34461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 11335994 - 11336098
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||  ||| || |||  ||| |||||||||||||||| |||      |||||||||||||||||||||||||||||||||||||||||    
T  11335994 cacagattaagaaatgtaatgaagtaaccattcgatataacacttttactaaa------ttactttataagaaaaagacaaaattaaagttgcattgaaa 11336087  T
Q  111 attgtgtgaga 121  Q
    |||||||||||    
T  11336088 attgtgtgaga 11336098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 41790117 - 41790268
Alignment:
Q  32 aaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatgggg 131  Q
    ||||||| ||| || |||| |||||||  ||| || |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||              
T  41790117 aaataatcattagacataatacttttattaaattgtctttgctttataagaaaaagacaaatttaaagttggattgaaaattgtgtgaga---------- 41790206  T
Q  132 agggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 195  Q
       | ||||||| |||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41790207 ---gaaaagttgaaagaaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaa 41790268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 35052531 - 35052427
Alignment:
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacgga 236  Q
    ||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||| ||||||         ||||||| ||||||||||||||||||||    
T  35052531 aaagttgaaagaaaaaaattaaagttgtattggaaatgtaaaacgacattcattttaaaacaatttttttttgctaaagcgacactcattttgaaacgga 35052432  T
Q  237 gggag 241  Q
    |||||    
T  35052431 gggag 35052427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 3095590 - 3095656
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  3095590 gagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaac 3095656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 5588563 - 5588628
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  5588563 ggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 5588628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 8382501 - 8382625
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtatt 167  Q
    |||||||||||||| ||| ||||||||||||||||||||||||  |||| ||| |         ||||||||||||  || |||||||||||||||||||    
T  8382501 aagaaaaagacaaacttatagttgcattgaaaattgtgtgagagaaaagttggagtatatattgagggtaaagttgagagaaaaaaattaaagttgtatt 8382600  T
Q  168 ggaaatgtaaagtgacattcatttt 192  Q
    | |||||||||||||||||||||||    
T  8382601 gaaaatgtaaagtgacattcatttt 8382625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 41414992 - 41414847
Alignment:
Q  48 taacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag--aaaagatggggagggtaaagttgga 145  Q
    |||||||||||| || ||||| ||| ||||||| ||||  | ||  |||||||||||||||||||||||||||  ||||| || ||| |||||| |||||    
T  41414992 taacacttttactaa-ctgcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaagttgaggaaggtaaaattgga 41414894  T
Q  146 aggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    || |||||||||||||  ||||  |||| |||||||||||| |||||    
T  41414893 agaaaaaaattaaagtgatattaaaaatataaagtgacatttatttt 41414847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 8107191 - 8107304
Alignment:
Q  78 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgt 175  Q
    ||||||||||||||| ||||||||  |||||||||||| |||||  |||| ||| |||  |||| ||  ||  |||||||||||||||||||| ||||||    
T  8107191 taagaaaaagacaaatttaaagttctattgaaaattgtctgagagaaaagttggagagaataaaatttaaaaaaaaaaattaaagttgtattgaaaatgt 8107290  T
Q  176 aaagtgacattcat 189  Q
    ||||||||||||||    
T  8107291 aaagtgacattcat 8107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 27416565 - 27416502
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  27416565 gagggtaaagttggacg--aaaaactaaagttgtattggaaatgtaaagtgacattcattttgaaa 27416502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 32737961 - 32737861
Alignment:
Q  12 acagattaagaaattgaataaaataattattggatataacacttttaccaaactgcc-tttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||||||| ||||| | ||| ||||||||||||||   |||||||| |||||||||||||||||||| ||| ||||| |||||||||||    
T  32737961 acagattaagaaattgaatgaaata-tcattagatataacacttttgttaaactgccctttactttataagaaaaagaaaaacttaaa-ttgcattgaaa 32737864  T
Q  111 att 113  Q
    |||    
T  32737863 att 32737861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 33870817 - 33870755
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  33870817 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgacatccattttgaaa 33870755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 39970390 - 39970323
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| || |||||| ||| ||||||||||||||||||||| ||||||||||||||||||    
T  39970390 gagggtaaagttgggag-aaaaaactaatgttgtattggaaatgtaaagtaacattcattttgaaacaa 39970323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 24732144 - 24732079
Alignment:
Q  12 acagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttacttta 77  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||  |||||||    
T  24732144 acagattaagaaattgaatgaaatagtcattggatataacacttttactaaactgcccctacttta 24732079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 32661371 - 32661310
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||| || |||||||||||||||||||| ||||||| ||| |||||||||||    
T  32661371 gagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtagagtaacattcatttt 32661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 42946188 - 42946120
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||| ||| ||| |||||||||||||||||||  ||||||||| ||||||||||||| ||||||    
T  42946188 gagggtaaaattgaaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 42946120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 32061515 - 32061578
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| ||| ||||||| |||||| | ||||||||||||||||||||||| ||||||    
T  32061515 taaagttggaagaaaataattaaatttgtatagaaaatgtaaagtgacattcattttaaaacaa 32061578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 13109123 - 13108989
Alignment:
Q  74 tttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaag 160  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||||||    |||| ||| |         ||| || ||||||||| ||||||||||||    
T  13109123 tttataagaaaaagacaaatttaaatttgcattaaaaattgtgtgagagagaaaagttggagtatttattaaggatagagttggaag-aaaaaattaaag 13109025  T
Q  161 ttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||| |||| ||||||||| |||||||||||||||||    
T  13109024 ttgcattgaaaatgtaaaatgacattcattttgaaa 13108989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 18673189 - 18673247
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||| ||||||||||||| | |||| |||||||||| ||||||||||||    
T  18673189 ggtaaagttggaagaaaaaaattaaagtcgcattgaaaatgtaaagcgacattcatttt 18673247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 27416641 - 27416593
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtg 118  Q
    ||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  27416641 ttactttataagaaaaagacaaacttagaattgcattgaaaattgtgtg 27416593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 39970454 - 39970412
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  39970454 aagaaaaagacaaacttaaagttgcattgaaaattgtgcgaga 39970412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 2812858 - 2812817
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcatt 190  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  2812858 aaaaaattaaagttgtattggaaatgtaaagcaacattcatt 2812817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 5044218 - 5044290
Alignment:
Q  47 ataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtga 119  Q
    |||| |||||||  |||||||  ||||||||||| ||||| ||||| ||||||||| ||| ||||||||||||    
T  5044218 ataatacttttattaaactgctcttactttataaaaaaaatacaaatttaaagttgtattaaaaattgtgtga 5044290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 42709949 - 42710048
Alignment:
Q  15 gattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattg 114  Q
    |||||||||||| |||||||| || ||| || || ||||||  || |||||  | ||||||||| | ||||||| |||||||||||||| ||||||||||    
T  42709949 gattaagaaattaaataaaattatcattagacatgacacttg-actaaactatccttactttattaaaaaaagataaaattaaagttgcgttgaaaattg 42710047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 3203368 - 3203325
Alignment:
Q  156 taaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||| |||| ||||||||||||||||| ||||||||||||    
T  3203368 taaagttgcattgaaaatgtaaagtgacatttattttgaaacaa 3203325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 5588426 - 5588512
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagtt 101  Q
    ||||||||||||  ||| ||||||| |||  | |||||| |||||| |||||||||  | ||||||||||||||||||| ||||||||    
T  5588426 agattaagaaatataatgaaataatcattaaacataacatttttactaaactgcctcaa-tttataagaaaaagacaaacttaaagtt 5588512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 43938168 - 43938125
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||    
T  43938168 aaaaaattaaagttctattcgaaatgtaaagtggcattcatttt 43938125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 2067770 - 2067725
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 195  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  2067770 aaaaaattaaaattgtattgaaaatgtaaa-tgacattcattttgaa 2067725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 170 - 200
Target Start/End: Complemental strand, 11335869 - 11335839
Alignment:
Q  170 aaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||||||||||||||||||||    
T  11335869 aaatgtaaagtgacattcattttgaaacaaa 11335839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 32661430 - 32661392
Alignment:
Q  83 aaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  32661430 aaaagacaaacttaaagttgtattgaaaattgtgtgaga 32661392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 2812968 - 2812916
Alignment:
Q  16 attaagaaattgaataaaataattattggatataacacttttaccaaactgcc 68  Q
    |||||| |||||||| ||||||| ||| || ||||||||||||| ||||||||    
T  2812968 attaagtaattgaatgaaataatcattagacataacacttttactaaactgcc 2812916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 11165516 - 11165484
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||| ||||||||||||    
T  11165516 gctaaagtgacactcattttaaaacggagggag 11165484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 11168890 - 11168922
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  11168890 gctaaagcgacactcattttgaaacggagggag 11168922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 34168158 - 34168126
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  34168158 gctaaagcgacactcattttgaaacggagggag 34168126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 39463464 - 39463496
Alignment:
Q  209 gctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||||||||||||||||||||||||    
T  39463464 gctaaagcgacactcattttgaaacggagggag 39463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 1737 - 1546
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaat- 112  Q
    ||||||||||||  ||| ||||||||||||||||||||  |||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||     
T  1737 agattaagaaatataatgaaataattattggatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 1638  T
Q  113 -tgtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
     |||| |||||||| |||          |||| |||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||    
T  1637 atgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaagttgtattggaaatataaagtgacattcattttga 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 70 - 241
Target Start/End: Original strand, 70467 - 70651
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||    |||| ||| |         |||||||||||||||| ||||||||    
T  70467 ttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaatt 70566  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||| |||| ||||||||||||||||||||||||||||||         ||||||  |||||||||||||||||||||||||    
T  70567 aaagttgcattgaaaatgtaaagtgacattcattttgaaacaattttttttggctaaaacgacactcattttgaaacggagggag 70651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 15995 - 16186
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||| ||||| ||| ||||||| |||  |||||||| |||||| ||||| |||||||||||||| |||| |||||| |||||||||||||||||    
T  15995 cacatattaaaaaattaaatgaaataatcattatatataacatttttactaaactacctttactttataa-aaaatgacaaacttaaagttgcattgaaa 16093  T
Q  111 attgtgtgaga-aaagatggg----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||||||||||| |||| | ||          |||||||||||| |||| |||||||||||||||||||  |||| ||||| |||||| |||||    
T  16094 attgtgtgagagaaaggttggaatatttattgagggtaaagtttgaagaaaaaaattaaagttgtattaaaaatataaagagacatttatttt 16186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 321792 - 321724
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  321792 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttaaaacaa 321724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 321866 - 321815
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    |||||||||| ||| |||||||| ||||| ||||||||||||||||||||||    
T  321866 ttactttataggaacaagacaaacttaaaattgcattgaaaattgtgtgaga 321815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 78 - 241
Target Start/End: Original strand, 13081 - 13255
Alignment:
Q  78 taagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtat 166  Q
    |||||||||||||||||||||||| ||||||||||||||   |||||||| ||  |         ||||||||||||| || ||||||||||| ||||||    
T  13081 taagaaaaagacaaaattaaagttacattgaaaattgtgccggagaaaagttgaagtatttattgagggtaaagttgggagaaaaaaattaaaattgtat 13180  T
Q  167 tggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||||||||||||| |||||||| ||||||         | |||||||||||||||||||||||||| ||||    
T  13181 tggaaatgtaaagtgacgttcattttaaaacaattttttttggttaaagtgacactcattttgaaacggaaggag 13255  T

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Target: scaffold0580 (Bit Score: 51; Significance: 6e-20; HSPs: 4)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 1691 - 1597
Alignment:
Q  149 aaaaaattaaagttgtatt--ggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||    
T  1691 aaaaaattaaagttgtattttggaaatgtaaagtgacattcattttgaaataattttttttggctaaagtgacactcattttgaaacggagggag 1597  T

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Target: scaffold0580; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 9430 - 9336
Alignment:
Q  149 aaaaaattaaagttgtatt--ggaaatgtaaagtgacattcattttgaaacaaannnnnnnagctaaagtgacactcattttgaaacggagggag 241  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||    
T  9430 aaaaaattaaagttgtattttggaaatgtaaagtgacattcattttgaaataattttttttggctaaagtgacactcattttgaaacggagggag 9336  T

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Target: scaffold0580; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 1768 - 1689
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaa 93  Q
    ||||||||||||  ||| ||||||| ||||||||||||| |||||| |||||| | ||||||||||||||||||||||||    
T  1768 agattaagaaatgaaatgaaataatcattggatataacatttttactaaactgaccttactttataagaaaaagacaaaa 1689  T

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Target: scaffold0580; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 9507 - 9428
Alignment:
Q  14 agattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaagacaaaa 93  Q
    ||||||||||||  ||| ||||||| ||||||||||||| |||||| |||||| | ||||||||||||||||||||||||    
T  9507 agattaagaaatgaaatgaaataatcattggatataacatttttactaaactgaccttactttataagaaaaagacaaaa 9428  T

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Target: scaffold0194 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 8206 - 8156
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  8206 aaaaaattaaagttgtattgaaaatgtaaattgacattcattttgaaacaa 8156  T

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Target: scaffold0194; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 8346 - 8277
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataa 80  Q
    |||||||||| |||| |||| ||||||| |||||||||||  ||||||| |||||||| || ||||||||    
T  8346 cacagattaaaaaatggaatgaaataatcattggatataaggcttttactaaactgcccttgctttataa 8277  T

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Target: scaffold0886 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 4063 - 4263
Alignment:
Q  11 cacagattaagaaattgaataaaataattattggatataacacttttaccaaactgcctttactttataagaaaaa-gacaaaattaaagttgcattgaa 109  Q
    |||| |||||||||| |||| ||| ||| |||  | |||||| |||||| ||| || | ||||||||||| ||||| |||||| ||||||||  ||||||    
T  4063 cacatattaagaaatggaatgaaacaatcattatacataacatttttacgaaattgtccttactttataaaaaaaatgacaaacttaaagtttgattgaa 4162  T
Q  110 aattgtgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||| |||||||  |||| ||| |         ||| |||||||||||| ||||||||||| ||||||| |||||||||||| ||||| ||||| |||||    
T  4163 aattatgtgagagaaaagttggagtatttattgaggataaagttggaagaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaaca 4262  T
Q  199 a 199  Q
    |    
T  4263 a 4263  T

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Target: scaffold0519 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 7791 - 7852
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| ||||| | |||||||||||  ||||||||||||||||||||||| ||||||    
T  7791 taaagttggaag-aaaaattaaaagttgtatta-aaatgtaaagtgacattcattttaaaacaa 7852  T

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Target: scaffold0519; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 7732 - 7765
Alignment:
Q  88 acaaaattaaagttgcattgaaaattgtgtgaga 121  Q
    ||||| ||||||||||||||||||||||||||||    
T  7732 acaaacttaaagttgcattgaaaattgtgtgaga 7765  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 158229 - 158195
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||||| ||||||||||||||||||||    
T  158229 aagaaaaagacaaacttaaagttgcattgaaaatt 158195  T

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Target: scaffold0758 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 6274 - 6241
Alignment:
Q  208 agctaaagtgacactcattttgaaacggagggag 241  Q
    ||||||||||||||||||||||||||||| ||||    
T  6274 agctaaagtgacactcattttgaaacggaaggag 6241  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 31667 - 31623
Alignment:
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||| || ||||||||||||||||| ||||||||||| ||||||    
T  31667 ttaaaattttattggaaatgtaaagtaacattcattttaaaacaa 31623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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