View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18266_high_16 (Length: 238)
Name: NF18266_high_16
Description: NF18266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18266_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 34098823 - 34098603
Alignment:
| Q |
1 |
tcggcggcgaagttccacttcccggcgacaagtccgatgaaccgtttgagcctagctccgttgccttagcaaaaatggtgcagagtttcatcgaagagag |
100 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34098823 |
tcggcggcgaagttccacttcccggcgacaaatccgatgaaccgtttgagcctagctccgttgccttagcaaaaatggtgcagagtttcatcgaagagag |
34098724 |
T |
|
| Q |
101 |
taacgagaaacaaaatccagtctcaaaactcactcgcaatagatgcaactgctttaacggtaacagtaatgatagctccgacgaagaacttgatttcttc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34098723 |
taacgagaaacaaaatccagtctcaaaactcactcgcaatagatgcaactgctttaacggtaacagtaatgatagctccgacgaagaacttgatttcttc |
34098624 |
T |
|
| Q |
201 |
ggcgaatctatcgctactggt |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
34098623 |
ggcgaatctatcgctactggt |
34098603 |
T |
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