View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18268_high_1 (Length: 839)
Name: NF18268_high_1
Description: NF18268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18268_high_1 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 706; Significance: 0; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 706; E-Value: 0
Query Start/End: Original strand, 20 - 822
Target Start/End: Original strand, 14340413 - 14341215
Alignment:
| Q |
20 |
gaactcttcagaggaagaagttaaaaggtcaattcctgatatcttgagccaattcacccaagcagtgcaggtaataattagcaaccaaagaaattaagcc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14340413 |
gaactcttcagaggaagaagttaaaaggtcaattcctgatatcttgagccaattcacccaagcagtgcaggtgataattagcaaccaaagaaattaagcc |
14340512 |
T |
|
| Q |
120 |
ttgttgatgcattattatcaagtttggcaattggtttgattccagttatattgtagtatgattgaaccaagtggaaccggtattggtttaattgattttc |
219 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14340513 |
tcgttgatgcattattatcaagtttggcgattggtttgattccagttatattgtagtatgattgaaccaagtggaaccggtattggtttaattgattttc |
14340612 |
T |
|
| Q |
220 |
attannnnnnnnnnnnnn-caacacttgcatgtcatctggttcaatcatgggttgagtcgataaaaccaattgaaccaacagagatataaccggttcaat |
318 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
14340613 |
attattttttttcctttttcaacacttgcatgtcatctggttcaatcatgg-ttgagtcgataaaaacaattgaaccaacggagatataaccggttcaat |
14340711 |
T |
|
| Q |
319 |
atccaatccaactattatatagcaatttggttatagaactaatacttgtcattcctatggtttagagattatacaatcatggagcaagagtgttttggat |
418 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
14340712 |
atccaatccaattattatatagcaacttggttatagaactaatacttgtcattcctatggtttagagattatacaatcaaggagcaagagtgttttggat |
14340811 |
T |
|
| Q |
419 |
tcacaatacaggtcctattggatgtataccctattattacttcttttatccacacaagaacgagaagagtaacttggatgccaatggctgtgttaaacct |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14340812 |
tcacaatacaggtcctattggatgtataccctattattacttcttttatccacacaagaacgagaagagtaacttggatgccaatggctgtgttaaacct |
14340911 |
T |
|
| Q |
519 |
cacaacgagcttgctcaggaatataacaggcagctaaaagaccaagtgtttcagctaaggagaatgtttccattagccaaatttacatatgttgatgttt |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14340912 |
cacaacgagcttgctcaggaatataacaggcagctaaaagaccaagtgtttcagctaaggagaatgtttccattagccaaatttacatatgttgatgttt |
14341011 |
T |
|
| Q |
619 |
acacagtcaaatatacacttatcagcaatgcaaggagccaaggtaattatgttcaattaagtttttgttatctttaaattatcaattgcttattgaatgt |
718 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
14341012 |
acacagtcaaatatacacttatcagcaatgcaaggagccaaggtaattatgttcaattaagtttttgttatctttaaatgatcaattgcttattgaatgt |
14341111 |
T |
|
| Q |
719 |
gcacaattaagttttaacttttatgcttgcatgatttgtggcaggttttataaatccattggaattttgttgtggaagttaccaaggtaacgaaatacat |
818 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14341112 |
gcacaattaagttttaacttttatgcttgcatgatttgtggcaggttttatgaatccattggaattttgttgtggaagttaccaaggtaacgaaatacat |
14341211 |
T |
|
| Q |
819 |
tatt |
822 |
Q |
| |
|
|||| |
|
|
| T |
14341212 |
tatt |
14341215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 637; E-Value: 0
Query Start/End: Original strand, 20 - 822
Target Start/End: Original strand, 3601539 - 3602332
Alignment:
| Q |
20 |
gaactcttcagaggaagaagttaaaaggtcaattcctgatatcttgagccaattcacccaagcagtgcaggtaataattagcaaccaaagaaattaagcc |
119 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3601539 |
gaactcttcagaggaagaagttagaaggtcaattcctgatatcttgagccaattcacccaagcagtgcaggtaataattagcaaccaaagaaattaagcc |
3601638 |
T |
|
| Q |
120 |
ttgttgatgcattattatcaagtttggcaattggtttgattccagttatattgtagtatgattgaaccaagtggaaccggtattggtttaattgattttc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
3601639 |
ttgttgatgcattattatcaagtttggcaattggtttgattccagttacattgtagtatgattgaaccaagttgaaccggtattggtttaattgattttc |
3601738 |
T |
|
| Q |
220 |
attannnnnnnnnnnnnncaacacttgcatgtcatctggttcaatcatgggttgagtcgataaaaccaattgaaccaacagagatataaccggttcaata |
319 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
3601739 |
attattttttccttttt-caacacttg----tcatctggttcaatcatgg-ttgagtcgataaaaccaattgaaacaacggagatataaccggttcaata |
3601832 |
T |
|
| Q |
320 |
tccaatccaactattatatagcaatttggttatagaactaatacttgtcattcctatggtttagagattatacaatcatggagcaagagtgttttggatt |
419 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | |||||||||||||||||| |
|
|
| T |
3601833 |
tccaatccaatcattatatagcaatttggttatagaactaatacttgtcattcctatggtttagaaattatacaatgaagaggcaagagtgttttggatt |
3601932 |
T |
|
| Q |
420 |
cacaatacaggtcctattggatgtataccctattattacttcttttatccacacaagaacgagaagagtaacttggatgccaatggctgtgttaaacctc |
519 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
3601933 |
cacaacacaggtcctattgaatgtataccctattattacttcttttatccacacaagaacgagaagggtaacttggatgccaatggctgtgttaaacctc |
3602032 |
T |
|
| Q |
520 |
acaacgagcttgctcaggaatataacaggcagctaaaagaccaagtgtttcagctaaggagaatgtttccattagccaaatttacatatgttgatgttta |
619 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3602033 |
acaacgagcttgctcaggaatataacaggcagctaaaagaccaagtgtttcagctaaggagaatgtttccattagccaaatttacatatgttgatgttta |
3602132 |
T |
|
| Q |
620 |
cacagtcaaatatacacttatcagcaatgcaaggagccaaggtaattatgttcaattaagtttttgttatctttaaattatcaattgcttattgaatgtg |
719 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
3602133 |
cacggtcaaatatacacttatcagcaatgcaaggaaccaaggta---atgttcaattaagtttttgttatctttaaaatatcaattgcttattgaatgtg |
3602229 |
T |
|
| Q |
720 |
cacaattaagttttaacttttatgcttgcatgatttgtggcaggttttataaatccattggaattttgttgtggaagttaccaaggtaacgaaatacatt |
819 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3602230 |
cacaattaagttttaacttttatgcttgcatgatttgtggcaggttttgtgaatccattggaattttgttgtggaagttaccaaggtaacgaaatacatt |
3602329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 116 - 654
Target Start/End: Original strand, 3590710 - 3591225
Alignment:
| Q |
116 |
agccttgttgatgcattattatcaagtttggcaattggtttgattccagttatattgtagtatgattgaaccaagtggaaccggtattggtttaattgat |
215 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||||||||| |||| |||| |||| ||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
3590710 |
agccttgttgatacattattattaagtttggcaattggtttgtttcctgttacattgcagtatgattgaactaagttgaaccggtattggtttaattgat |
3590809 |
T |
|
| Q |
216 |
tttcattannnnnnnnnnnnnncaacacttgcatgtcatctggttcaatcatgggttgagtcgataaaaccaattgaaccaacagagatataaccggttc |
315 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||| | ||||||| |
|
|
| T |
3590810 |
tttcatttttttttcaattttt-aacacttg----tcatctggttcaatcatgg-ttgagccgataaaaccaatcgaaccaacacccgga---ccggttc |
3590900 |
T |
|
| Q |
316 |
aatatccaatccaactattatatagcaatttggttatagaactaatacttgtcattcctatggtttagagattatacaatcatggagcaagagtgttttg |
415 |
Q |
| |
|
||| |||||||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||||||| | || |||||||||||||| |
|
|
| T |
3590901 |
aatctccaatccaattattatatagcattttggttatagaactaatagttgtcattcttatggtttagaaattatacaatgaaggggcaagagtgttttg |
3591000 |
T |
|
| Q |
416 |
gattcacaatacaggtcctattggatgtataccctattattacttcttttatccacacaagaacgagaagagtaacttggatgccaatggctgtgttaaa |
515 |
Q |
| |
|
|||||||||||||||||||||||||||| | || ||||| ||||||||||||||| | ||||||| ||||||||||||||||||||| |
|
|
| T |
3591001 |
gattcacaatacaggtcctattggatgttcatcc--------cttctattatccacacaagaagg------gtaacttagatgccaatggctgtgttaaa |
3591086 |
T |
|
| Q |
516 |
cctcacaacgagcttgctcaggaatataacaggcagctaaaagaccaagtgtttcagctaaggagaatgtttccattagccaaatttacatatgttgatg |
615 |
Q |
| |
|
|||||||| |||||||||| ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3591087 |
cctcacaataagcttgctcaagaatataactggtagctaaaagaccaagtgtttcagctaaggagaaagtttccattagccaaatttacatatgttgatg |
3591186 |
T |
|
| Q |
616 |
tttacacagtcaaatatacacttatcagcaatgcaagga |
654 |
Q |
| |
|
|||||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
3591187 |
tttacacagtaaaatataaacttatcagcaacgcaagga |
3591225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 304 - 665
Target Start/End: Original strand, 3568817 - 3569173
Alignment:
| Q |
304 |
tataaccggttcaatatccaatccaactattatatagcaatttggttatagaac-----taatacttgtcattcctatggtttagagattatacaatcat |
398 |
Q |
| |
|
|||||| ||| |||| |||||||||| |||||||||||||||||||| |||||| |||||||||||||| || || |||||| | |||| | |
|
|
| T |
3568817 |
tataacaggtacaatctccaatccaattattatatagcaatttggttttagaacagaactaatacttgtcattactctgttttaga---ttcacaacgaa |
3568913 |
T |
|
| Q |
399 |
ggagcaagagtgttttggattcacaatacaggtcctattggatgtataccctattattacttcttttatccacacaagaacgagaagagtaacttggatg |
498 |
Q |
| |
|
| ||||||||||||| ||||||||||||||||||||||||||| |||||||| || || ||| ||||||||||||||| | ||| |||||||| |
|
|
| T |
3568914 |
cgggcaagagtgttttcgattcacaatacaggtcctattggatgcttaccctatgataacatctattatccacacaagaaggggaa------cttggatg |
3569007 |
T |
|
| Q |
499 |
ccaatggctgtgttaaacctcacaacgagcttgctcaggaatataacaggcagctaaaagaccaagtgtttcagctaaggagaatgtttccattagccaa |
598 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
3569008 |
ccaatggttgttttaaacctcacaacgagcttgctcaggaatagaacaggcagctaaaagac-aagcgtttcagctaaggagaaagtttccattagccaa |
3569106 |
T |
|
| Q |
599 |
atttacatatgttgatgtttacacagtcaaatatacacttatcagcaatgcaaggagccaaggtaat |
665 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | |||||||||||| ||||||||||| |||||| |
|
|
| T |
3569107 |
atttacatatgttgatgtttacacagtaaaatagaaacttatcagcaacgcaaggagccagggtaat |
3569173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 3568539 - 3568732
Alignment:
| Q |
18 |
cagaactcttcagaggaagaagttaaaaggtcaattcctgatatcttgagccaattcacccaagcagtgcaggtaataattagcaaccaaagaaattaag |
117 |
Q |
| |
|
||||| |||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| | | | ||||||||||||||| |
|
|
| T |
3568539 |
cagaagtcttcagaggaacaagttagaaggtcaattcctgacatcttgagccaattctcccaagcagtgcaggtaattagcaaccaccaaagaaattaag |
3568638 |
T |
|
| Q |
118 |
ccttgttgatgcattattatcaagtttggcaattggtttgattccagttatattgtagtatgattgaaccaagtggaaccggtattggtttaat |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | |||| |||| |||||||||| ||||||| |||| |||||||||||| |
|
|
| T |
3568639 |
ccttgttgatgcattattatcaagtttggcaattggtttgattacggttacattgcagtatgattgcaccaagttgaacatctattggtttaat |
3568732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 717 - 800
Target Start/End: Original strand, 3569487 - 3569570
Alignment:
| Q |
717 |
gtgcacaattaagttttaacttttatgcttgcatgatttgtggcaggttttataaatccattggaattttgttgtggaagttac |
800 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||||||||| |||| || | ||||||||||||||||| |||||||||||| |
|
|
| T |
3569487 |
gtgcacaattaagttttaatttttaatcttgcatgatttgtggtaggtcttgtgaatccattggaattttgctgtggaagttac |
3569570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 717 - 800
Target Start/End: Original strand, 3577213 - 3577296
Alignment:
| Q |
717 |
gtgcacaattaagttttaacttttatgcttgcatgatttgtggcaggttttataaatccattggaattttgttgtggaagttac |
800 |
Q |
| |
|
||||||| |||||| |||| |||||| |||||| |||||||||| |||||| ||||||||||| ||||||| |||||||||||| |
|
|
| T |
3577213 |
gtgcacagttaagtgttaatttttattcttgcacgatttgtggctggttttgtaaatccattgaaattttgctgtggaagttac |
3577296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 3590633 - 3590708
Alignment:
| Q |
19 |
agaactcttcagaggaagaagttaaaaggtcaattcctgatatcttgagccaattcacccaagcagtgcaggtaat |
94 |
Q |
| |
|
||||| ||||| ||||| |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3590633 |
agaacacttcaaaggaacaagttagaaggtcatttcctgatatcttgagccaattcttccaagcagtgcaggtaat |
3590708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 717 - 800
Target Start/End: Original strand, 3591554 - 3591637
Alignment:
| Q |
717 |
gtgcacaattaagttttaacttttatgcttgcatgatttgtggcaggttttataaatccattggaattttgttgtggaagttac |
800 |
Q |
| |
|
||||||| |||||| |||| |||||| |||||| ||||||||||||||||| | ||||||||| ||| || ||||||| |||| |
|
|
| T |
3591554 |
gtgcacagttaagtgttaatttttattcttgcacgatttgtggcaggttttgtgaatccattgaaatatttctgtggaaattac |
3591637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 177; Significance: 6e-95; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 249 - 665
Target Start/End: Original strand, 1409169 - 1409581
Alignment:
| Q |
249 |
tgtcatctggttcaatcatgggttgagtcgataaaaccaattgaaccaaca----gagatataaccggttcaatatccaatccaactattatatagcaat |
344 |
Q |
| |
|
||||||||||||||||| ||| | | | |||||||||||||||||||| | ||| | |||||| |||||| | || ||| |||||||||||||||| |
|
|
| T |
1409169 |
tgtcatctggttcaatcgtggttcaact-gataaaaccaattgaaccaagactcggaggtttaaccg-ttcaatcttcagtccgactattatatagcaat |
1409266 |
T |
|
| Q |
345 |
ttggttatagaactaatacttgtcattcctatggtttagagattatacaatcatggagcaagagtgttttggattcacaatacaggtcctattggatgta |
444 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| ||||| | | |||||| | || |||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
1409267 |
ttggttttagaactaatacttgtcattactatgttttagcaactctacaatgaaggggcaagagtgttttggattcacaatgtaggtccaattggatgct |
1409366 |
T |
|
| Q |
445 |
taccctattattacttcttttatccacacaagaacgagaagagtaacttggatgccaatggctgtgttaaacctcacaacgagcttgctcaggaatataa |
544 |
Q |
| |
|
| |||||| || || ||| ||||||||||||||| | |||||||||||| | |||||||||||| ||||||||| ||||||||||| |||||||| |
|
|
| T |
1409367 |
tgccctataataacatctattatccacacaagaagg------gtaacttggatgtctatggctgtgttatacctcacaatgagcttgctcaagaatataa |
1409460 |
T |
|
| Q |
545 |
caggcagctaaaagaccaagtgtttcagctaaggagaatgtttccattagccaaatttacatatgttgatgtttacacagtcaaatatacacttatcagc |
644 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||| |
|
|
| T |
1409461 |
caggcagctaaaagacaaagtgtttcagctaaggcgaaagtttccattagccaagtttacatatgttgatgtgtacacagccaaatataaacttattagc |
1409560 |
T |
|
| Q |
645 |
aatgcaaggagccaaggtaat |
665 |
Q |
| |
|
||||||| ||||||||||||| |
|
|
| T |
1409561 |
aatgcaaagagccaaggtaat |
1409581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 1408799 - 1408906
Alignment:
| Q |
18 |
cagaactcttcagaggaagaagttaaaaggtcaattcctgatatcttgagccaattcacccaagcagtgcaggtaataattagcaaccaaagaaattaag |
117 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || | |||||||| |||||| |
|
|
| T |
1408799 |
cagaacacttcagaggaacaagttaaaaggtcaattcctgatatcttgagccaattctcccaagcagtgcaggtaatttgtaaccaccaaagatattaag |
1408898 |
T |
|
| Q |
118 |
ccttgttg |
125 |
Q |
| |
|
|||||||| |
|
|
| T |
1408899 |
ccttgttg |
1408906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 402 - 662
Target Start/End: Original strand, 1412370 - 1412624
Alignment:
| Q |
402 |
gcaagagtgttttggattcacaatacaggtcctattggatgtataccctattattacttcttttatccacacaagaacgagaagagtaacttggatgcca |
501 |
Q |
| |
|
||||||||||| ||||| |||||||||||||| |||||||| | |||| ||||||||| |||| |||||||| | ||||| | || |||| |
|
|
| T |
1412370 |
gcaagagtgttctggatacacaatacaggtccaattggatgcttgcccttcaattacttctcttatgagcacaagaagg------gtaacctagacgcca |
1412463 |
T |
|
| Q |
502 |
atggctgtgttaaacctcacaacgagcttgctcaggaatataacaggcagctaaaagaccaagtgtttcagctaaggagaatgtttccattagccaaatt |
601 |
Q |
| |
|
|||||||||| |||||||| ||| | | ||||| |||| ||||| | ||||||| |||||||||| | | |||||||||| | | | |||||||| |
|
|
| T |
1412464 |
atggctgtgtgaaacctcagaacaaaatagctcaagaatttaacaagaagctaaaggaccaagtgtcttatctaaggagaaaactcctacaggccaaatt |
1412563 |
T |
|
| Q |
602 |
tacatatgttgatgtttacacagtcaaatatacacttatcagcaatgcaaggagccaaggt |
662 |
Q |
| |
|
||||||||||||| | |||| || ||||||| ||| ||||||||||||||||||| |||| |
|
|
| T |
1412564 |
tacatatgttgatatgtacaaagccaaatatgaactaatcagcaatgcaaggagccgaggt |
1412624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 800
Target Start/End: Original strand, 1409817 - 1409896
Alignment:
| Q |
717 |
gtgcacaattaagttttaacttttatgcttgcatgatttgtggcaggttttataaatccattggaattttgttgtggaagttac |
800 |
Q |
| |
|
||||||||||| ||||||||| | ||||||| |||||||||||||||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
1409817 |
gtgcacaattaggttttaactctcatgcttg----atttgtggcaggttttgtgaatccattggaattttgctgtggaagttac |
1409896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 1411942 - 1412011
Alignment:
| Q |
25 |
cttcagaggaagaagttaaaaggtcaattcctgatatcttgagccaattcacccaagcagtgcaggtaat |
94 |
Q |
| |
|
||||||| ||| ||||| |||||||||||||||| || ||||||||||| ||||||||||| ||||||| |
|
|
| T |
1411942 |
cttcagaagaacaagttcaaaggtcaattcctgaaatattgagccaattgtcccaagcagtgaaggtaat |
1412011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 1416792 - 1416861
Alignment:
| Q |
25 |
cttcagaggaagaagttaaaaggtcaattcctgatatcttgagccaattcacccaagcagtgcaggtaat |
94 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||| || |||||| | ||| ||||| ||||| ||||||| |
|
|
| T |
1416792 |
cttcagaggaacaagttcaaaggtcaattcctgaaatattgagcaatttctcccaatcagtgaaggtaat |
1416861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 594 - 662
Target Start/End: Original strand, 1417191 - 1417259
Alignment:
| Q |
594 |
gccaaatttacatatgttgatgtttacacagtcaaatatacacttatcagcaatgcaaggagccaaggt |
662 |
Q |
| |
|
||||||||||||||||||||| | |||| || |||| || ||| ||||||||||||| |||||||||| |
|
|
| T |
1417191 |
gccaaatttacatatgttgatatgtacaaagccaaacatgaactaatcagcaatgcaaagagccaaggt |
1417259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 594 - 662
Target Start/End: Original strand, 1421679 - 1421747
Alignment:
| Q |
594 |
gccaaatttacatatgttgatgtttacacagtcaaatatacacttatcagcaatgcaaggagccaaggt |
662 |
Q |
| |
|
||||||||||||||||||||| | |||| || |||||| ||| ||||||||||||| |||||||||| |
|
|
| T |
1421679 |
gccaaatttacatatgttgatatgtacaaagctaaatatgaactaatcagcaatgcaaagagccaaggt |
1421747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 1409071 - 1409118
Alignment:
| Q |
151 |
tggtttgattccagttatattgtagtatgattgaaccaagtggaaccg |
198 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||||| |||||| |
|
|
| T |
1409071 |
tggtttgattccgattatattgcagtatgattgaaccaagttgaaccg |
1409118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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