View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18269_high_16 (Length: 297)
Name: NF18269_high_16
Description: NF18269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18269_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 10 - 282
Target Start/End: Original strand, 8094424 - 8094696
Alignment:
| Q |
10 |
catcatcaggtagatgaccaggattatctccatagacagccgtgggagtttccttttgttcttcgattttagggacaacggttgtggtttgtaccaattc |
109 |
Q |
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| T |
8094424 |
catcatcgggtagatgaccaggattatctccatagacagccgtgggagtttccttttgttcttcgattttagggacaacggttgtggtttgtaccaattc |
8094523 |
T |
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| Q |
110 |
ttctgtgtttttagttttggtttgttgtgaatcatcggaggtagagaaatcgttgttcgtgttatcggatgtatcaatagccgttcgggtgctggtaatc |
209 |
Q |
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| T |
8094524 |
ttctgtgtttttagttttggtttgttgtgaatcatcggaggtagagaaatcgttgttcgtgttatcggatgtatcaatagccgttcgggtgctggtaatc |
8094623 |
T |
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| Q |
210 |
tcttcttcgctttgtgttttcgacgaaaacaaagagttggaggagttggagtttagcatccatacaccaaaaa |
282 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
8094624 |
tcttcttcgctttgtgttttcgacgaaaacatagagttggaggagttggagtttagcatccatacaccaaaaa |
8094696 |
T |
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