View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18269_low_18 (Length: 281)
Name: NF18269_low_18
Description: NF18269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18269_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 12 - 267
Target Start/End: Complemental strand, 44244871 - 44244616
Alignment:
| Q |
12 |
atgaatactccatactttaacnnnnnnnnttataacaagatctgggaacatcttgttatataaacatcatgaaatcaatcgaagaaaagtgtctcataat |
111 |
Q |
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| T |
44244871 |
atgaatactccatactttaacaaaaaaaattataacaagatctgggaacatcttgttatataaacatcatgaaatcaatcgaagaaaagtgtttcataat |
44244772 |
T |
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| Q |
112 |
ccaagttgaactaatgtttgaagctttaacaactgatattgctcctatgtagaagttcaaagtattatttgtcctcacaagatggcgatctcatctatgc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44244771 |
ccaagttgaactaatgtttgaagctttaacaactgatattgctcctatgtagaagttcaaagtattatttgtcctcacaagatggcgatctcatctatgc |
44244672 |
T |
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| Q |
212 |
cagttcaacaaagcgtgaaaaataaatattagtgtatcaaggtttaacttaagttt |
267 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44244671 |
cagttcaacaaagcgtgaaaaataaatattagtgtatcaaggtttaacttaagttt |
44244616 |
T |
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