View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18269_low_21 (Length: 260)
Name: NF18269_low_21
Description: NF18269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18269_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 24 - 241
Target Start/End: Original strand, 35439038 - 35439255
Alignment:
| Q |
24 |
gctcctccacgaaaagaaattccgaaggcaccacctcttcctccaaccatgtacagagaagaagcagctgcagcaccaccaccacctggtccacctccac |
123 |
Q |
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| T |
35439038 |
gctcctccacgaaaagaaattccgaaggcaccacctcttcctccaaccatgtacagagaaggagcagctgcagcaccaccaccacctggtccacctccac |
35439137 |
T |
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| Q |
124 |
ttccaaagtctaggggattcatttcatccatgaaaccgccaccagcaccgaaaggaaaagcaaatgtcaaagagggtgtaataggagagagttcaagaga |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35439138 |
ttccaaagtctaggggattcatttcatccatgaaaccgccaccagcaccgaaaggaaaagcaaatgtcaaagagggtgtaataggagagagttcaagaga |
35439237 |
T |
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| Q |
224 |
gaagggtggcggccaaac |
241 |
Q |
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||||| ||| |||||||| |
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| T |
35439238 |
gaaggctggtggccaaac |
35439255 |
T |
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