View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18269_low_7 (Length: 513)

Name: NF18269_low_7
Description: NF18269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18269_low_7
NF18269_low_7
[»] chr1 (52 HSPs)
chr1 (118-398)||(16437037-16437315)
chr1 (88-175)||(844931-845018)
chr1 (88-175)||(42510405-42510492)
chr1 (88-173)||(24339844-24339929)
chr1 (88-175)||(41972792-41972879)
chr1 (88-175)||(1351641-1351728)
chr1 (88-175)||(7183798-7183885)
chr1 (88-175)||(16386734-16386821)
chr1 (91-173)||(12890120-12890202)
chr1 (88-173)||(16451009-16451094)
chr1 (88-175)||(28340510-28340597)
chr1 (99-174)||(26765007-26765082)
chr1 (88-171)||(38087202-38087285)
chr1 (88-174)||(17887828-17887914)
chr1 (92-173)||(50540226-50540307)
chr1 (88-173)||(51264377-51264462)
chr1 (88-175)||(6711253-6711341)
chr1 (88-175)||(39281775-39281862)
chr1 (88-173)||(45491082-45491167)
chr1 (101-173)||(32270240-32270312)
chr1 (88-175)||(25539736-25539823)
chr1 (88-175)||(35387518-35387605)
chr1 (99-174)||(41968067-41968142)
chr1 (88-175)||(50304532-50304619)
chr1 (99-174)||(51703380-51703455)
chr1 (88-169)||(11772838-11772919)
chr1 (88-172)||(17327856-17327940)
chr1 (88-172)||(44738248-44738332)
chr1 (88-175)||(6029507-6029594)
chr1 (88-175)||(46154780-46154867)
chr1 (88-169)||(31004019-31004100)
chr1 (88-172)||(6144192-6144276)
chr1 (94-173)||(3415067-3415146)
chr1 (88-175)||(16476361-16476448)
chr1 (128-175)||(34663822-34663869)
chr1 (108-174)||(1601049-1601115)
chr1 (88-170)||(10384253-10384335)
chr1 (88-175)||(42512976-42513060)
chr1 (455-498)||(16436937-16436980)
chr1 (128-175)||(26118447-26118494)
chr1 (128-175)||(30105912-30105959)
chr1 (88-157)||(15540096-15540165)
chr1 (88-169)||(23799670-23799751)
chr1 (107-174)||(8838820-8838887)
chr1 (119-173)||(25343426-25343480)
chr1 (88-174)||(38663014-38663100)
chr1 (88-124)||(26118422-26118458)
chr1 (126-172)||(5109614-5109660)
chr1 (94-175)||(570267-570348)
chr1 (123-176)||(21071609-21071662)
chr1 (113-174)||(39717290-39717351)
chr1 (124-172)||(17827905-17827953)
[»] chr6 (37 HSPs)
chr6 (88-176)||(28502329-28502417)
chr6 (88-176)||(29814735-29814823)
chr6 (88-172)||(11212131-11212215)
chr6 (88-174)||(17443135-17443221)
chr6 (88-176)||(32410023-32410111)
chr6 (88-175)||(15277108-15277195)
chr6 (88-175)||(24242535-24242622)
chr6 (88-175)||(32805349-32805436)
chr6 (88-169)||(17867712-17867793)
chr6 (88-169)||(17877495-17877576)
chr6 (88-173)||(24203236-24203321)
chr6 (99-175)||(11381964-11382040)
chr6 (88-171)||(4494269-4494352)
chr6 (89-175)||(3259549-3259635)
chr6 (88-175)||(2614767-2614854)
chr6 (88-175)||(10959872-10959959)
chr6 (88-170)||(18057396-18057478)
chr6 (88-164)||(10324282-10324358)
chr6 (88-175)||(14925626-14925713)
chr6 (100-173)||(23636097-23636170)
chr6 (110-173)||(11279012-11279075)
chr6 (109-175)||(11613968-11614034)
chr6 (88-172)||(14808170-14808254)
chr6 (91-175)||(34684159-34684243)
chr6 (88-175)||(8178053-8178140)
chr6 (88-159)||(15277451-15277522)
chr6 (88-174)||(3932978-3933064)
chr6 (88-134)||(32132551-32132597)
chr6 (128-175)||(167119-167166)
chr6 (183-232)||(6625039-6625088)
chr6 (94-175)||(32859923-32860004)
chr6 (88-176)||(10485029-10485116)
chr6 (94-166)||(29054239-29054311)
chr6 (128-175)||(34176716-34176763)
chr6 (94-168)||(18597334-18597408)
chr6 (98-175)||(3379583-3379660)
chr6 (88-124)||(167094-167130)
[»] chr8 (43 HSPs)
chr8 (88-175)||(41709648-41709735)
chr8 (88-175)||(45446326-45446413)
chr8 (88-175)||(32303732-32303819)
chr8 (88-173)||(32020148-32020233)
chr8 (88-175)||(8673202-8673289)
chr8 (94-175)||(6386447-6386528)
chr8 (88-175)||(31513730-31513817)
chr8 (88-175)||(34101379-34101466)
chr8 (88-173)||(13407082-13407167)
chr8 (88-175)||(3251803-3251890)
chr8 (94-169)||(15001344-15001419)
chr8 (88-175)||(27103830-27103917)
chr8 (88-175)||(31731935-31732022)
chr8 (88-171)||(21272588-21272671)
chr8 (88-175)||(29563373-29563460)
chr8 (88-175)||(29672470-29672557)
chr8 (88-175)||(34062999-34063086)
chr8 (94-173)||(45113929-45114008)
chr8 (88-172)||(7394961-7395045)
chr8 (88-175)||(37618538-37618625)
chr8 (99-173)||(955094-955168)
chr8 (88-173)||(17805563-17805648)
chr8 (98-175)||(25478119-25478196)
chr8 (88-172)||(35225537-35225621)
chr8 (88-171)||(12753472-12753554)
chr8 (88-144)||(5969011-5969067)
chr8 (91-175)||(40388912-40388996)
chr8 (128-175)||(4052368-4052415)
chr8 (128-175)||(14005216-14005263)
chr8 (88-175)||(22999129-22999216)
chr8 (128-175)||(37861767-37861814)
chr8 (88-175)||(17520468-17520560)
chr8 (128-173)||(30543194-30543239)
chr8 (88-124)||(4052404-4052440)
chr8 (88-136)||(7591593-7591641)
chr8 (128-172)||(37664455-37664499)
chr8 (88-175)||(30501017-30501104)
chr8 (99-165)||(32918772-32918838)
chr8 (101-162)||(16595308-16595369)
chr8 (88-124)||(30543169-30543205)
chr8 (88-168)||(37474598-37474678)
chr8 (88-124)||(37861803-37861839)
chr8 (119-175)||(39642755-39642811)
[»] chr7 (46 HSPs)
chr7 (88-175)||(36769702-36769789)
chr7 (88-175)||(3922836-3922923)
chr7 (88-175)||(10932690-10932777)
chr7 (88-174)||(26994358-26994444)
chr7 (88-171)||(18470563-18470646)
chr7 (88-175)||(30599141-30599228)
chr7 (88-173)||(30849379-30849464)
chr7 (88-173)||(32873902-32873987)
chr7 (88-172)||(21784749-21784833)
chr7 (88-175)||(11322018-11322105)
chr7 (88-175)||(12982178-12982265)
chr7 (88-174)||(47947636-47947722)
chr7 (88-174)||(47953066-47953152)
chr7 (96-173)||(3892167-3892244)
chr7 (101-175)||(43189389-43189463)
chr7 (94-175)||(46408771-46408852)
chr7 (88-171)||(41211334-41211417)
chr7 (88-175)||(46633572-46633659)
chr7 (107-173)||(47316835-47316901)
chr7 (88-172)||(43158819-43158903)
chr7 (94-173)||(1870011-1870090)
chr7 (88-175)||(9913401-9913488)
chr7 (88-175)||(9927089-9927176)
chr7 (88-175)||(23349423-23349510)
chr7 (88-175)||(48894593-48894680)
chr7 (88-169)||(329352-329433)
chr7 (88-175)||(43368077-43368164)
chr7 (128-175)||(16962987-16963034)
chr7 (88-175)||(18386400-18386487)
chr7 (119-174)||(34117349-34117404)
chr7 (128-175)||(40753045-40753092)
chr7 (88-166)||(11822116-11822194)
chr7 (94-164)||(22724669-22724739)
chr7 (88-163)||(26371942-26372017)
chr7 (88-175)||(34295536-34295623)
chr7 (93-175)||(38301224-38301306)
chr7 (88-173)||(21133248-21133333)
chr7 (88-173)||(26910539-26910624)
chr7 (88-175)||(20127163-20127248)
chr7 (108-174)||(22631609-22631675)
chr7 (94-168)||(22724170-22724244)
chr7 (88-175)||(43214057-43214139)
chr7 (88-167)||(48445405-48445484)
chr7 (88-170)||(41665707-41665789)
chr7 (139-172)||(17237005-17237038)
chr7 (126-175)||(46448799-46448848)
[»] chr4 (60 HSPs)
chr4 (88-175)||(24002212-24002299)
chr4 (88-175)||(9807031-9807118)
chr4 (88-175)||(21579900-21579987)
chr4 (88-175)||(43640973-43641060)
chr4 (88-175)||(49152224-49152311)
chr4 (88-175)||(20802656-20802743)
chr4 (88-175)||(23521754-23521841)
chr4 (88-175)||(52319200-52319287)
chr4 (95-174)||(12600761-12600840)
chr4 (88-175)||(37865627-37865714)
chr4 (88-175)||(14296471-14296558)
chr4 (88-175)||(29785662-29785749)
chr4 (88-175)||(56154495-56154582)
chr4 (88-173)||(6776460-6776539)
chr4 (88-175)||(14314719-14314806)
chr4 (88-175)||(21202614-21202701)
chr4 (88-174)||(55065457-55065543)
chr4 (88-175)||(33177157-33177244)
chr4 (88-175)||(34929789-34929876)
chr4 (88-175)||(38486382-38486464)
chr4 (95-175)||(2786839-2786919)
chr4 (88-175)||(20694250-20694332)
chr4 (88-175)||(29592775-29592857)
chr4 (118-173)||(46680645-46680700)
chr4 (109-175)||(36885820-36885886)
chr4 (106-172)||(42869859-42869925)
chr4 (99-172)||(55593759-55593835)
chr4 (88-169)||(52949602-52949683)
chr4 (88-172)||(37931798-37931882)
chr4 (88-175)||(9512465-9512552)
chr4 (88-175)||(36743813-36743900)
chr4 (88-175)||(50729650-50729737)
chr4 (118-172)||(32181161-32181215)
chr4 (88-170)||(50178617-50178699)
chr4 (88-137)||(20518147-20518196)
chr4 (88-169)||(22318508-22318589)
chr4 (88-175)||(7555081-7555168)
chr4 (88-175)||(37695665-37695752)
chr4 (88-175)||(54542865-54542951)
chr4 (94-175)||(3649511-3649592)
chr4 (88-156)||(7001748-7001816)
chr4 (128-172)||(33552992-33553036)
chr4 (91-175)||(47642618-47642702)
chr4 (126-173)||(41711747-41711794)
chr4 (88-175)||(44649286-44649373)
chr4 (134-175)||(2725288-2725329)
chr4 (118-175)||(38520438-38520495)
chr4 (119-171)||(13110207-13110259)
chr4 (133-173)||(50728048-50728088)
chr4 (133-173)||(50736062-50736102)
chr4 (128-175)||(29616059-29616106)
chr4 (128-175)||(32081047-32081094)
chr4 (128-175)||(36497106-36497153)
chr4 (119-173)||(38812416-38812470)
chr4 (183-245)||(48532342-48532404)
chr4 (134-175)||(23327806-23327847)
chr4 (88-157)||(47669228-47669297)
chr4 (88-124)||(47361534-47361570)
chr4 (128-172)||(47361559-47361603)
chr4 (95-175)||(52949519-52949599)
[»] chr2 (43 HSPs)
chr2 (88-176)||(34338680-34338768)
chr2 (88-175)||(5278966-5279053)
chr2 (88-175)||(18685707-18685794)
chr2 (88-175)||(32497786-32497873)
chr2 (88-175)||(35114656-35114743)
chr2 (88-175)||(30326463-30326550)
chr2 (88-175)||(33366481-33366568)
chr2 (88-175)||(40692176-40692263)
chr2 (88-173)||(39461187-39461272)
chr2 (88-172)||(2085946-2086030)
chr2 (88-175)||(37308527-37308614)
chr2 (89-172)||(17540588-17540671)
chr2 (88-173)||(42706231-42706316)
chr2 (88-164)||(9733062-9733138)
chr2 (88-175)||(4641387-4641474)
chr2 (92-175)||(16104145-16104228)
chr2 (88-173)||(19513821-19513906)
chr2 (110-174)||(9717113-9717177)
chr2 (88-175)||(2645218-2645305)
chr2 (88-175)||(26418794-26418881)
chr2 (94-175)||(37004007-37004088)
chr2 (88-173)||(38993199-38993284)
chr2 (99-175)||(3913602-3913678)
chr2 (99-175)||(12672596-12672671)
chr2 (91-171)||(26981825-26981904)
chr2 (119-175)||(44284508-44284564)
chr2 (88-175)||(13829310-13829397)
chr2 (88-172)||(30798621-30798703)
chr2 (88-175)||(40832602-40832692)
chr2 (88-147)||(7258795-7258854)
chr2 (99-174)||(28824699-28824773)
chr2 (128-175)||(33889129-33889176)
chr2 (88-173)||(18793393-18793478)
chr2 (88-175)||(16178012-16178099)
chr2 (94-169)||(42365454-42365529)
chr2 (196-245)||(33305515-33305564)
chr2 (88-172)||(30712732-30712816)
chr2 (88-171)||(27462931-27463014)
chr2 (103-175)||(10400011-10400083)
chr2 (88-175)||(6896041-6896127)
chr2 (99-170)||(11114749-11114820)
chr2 (280-342)||(39534181-39534244)
chr2 (108-169)||(8112183-8112244)
[»] scaffold0054 (1 HSPs)
scaffold0054 (88-175)||(23448-23535)
[»] chr5 (36 HSPs)
chr5 (88-175)||(7523042-7523129)
chr5 (91-174)||(2351552-2351635)
chr5 (88-175)||(20119642-20119729)
chr5 (88-175)||(35701148-35701235)
chr5 (88-175)||(8136710-8136797)
chr5 (88-175)||(32528586-32528673)
chr5 (88-174)||(4818278-4818364)
chr5 (99-175)||(548219-548295)
chr5 (88-175)||(39918379-39918465)
chr5 (88-175)||(41790600-41790687)
chr5 (94-168)||(34794765-34794839)
chr5 (88-171)||(11963216-11963299)
chr5 (88-175)||(40182335-40182422)
chr5 (88-172)||(5673018-5673102)
chr5 (88-175)||(6284437-6284524)
chr5 (88-174)||(37148711-37148797)
chr5 (98-175)||(21739304-21739381)
chr5 (88-174)||(24036105-24036191)
chr5 (88-141)||(31770729-31770782)
chr5 (88-175)||(4689835-4689922)
chr5 (128-175)||(24181787-24181834)
chr5 (88-174)||(3735230-3735316)
chr5 (88-169)||(7770416-7770497)
chr5 (88-176)||(22493556-22493644)
chr5 (88-175)||(7725946-7726033)
chr5 (128-175)||(31880239-31880286)
chr5 (94-175)||(27839213-27839294)
chr5 (128-176)||(23091467-23091515)
chr5 (128-175)||(7208393-7208440)
chr5 (88-175)||(18470565-18470652)
chr5 (128-175)||(29241264-29241311)
chr5 (94-175)||(32093124-32093203)
chr5 (128-174)||(39788079-39788125)
chr5 (88-124)||(29241300-29241336)
chr5 (88-150)||(700739-700801)
chr5 (88-124)||(41459511-41459547)
[»] chr3 (42 HSPs)
chr3 (88-175)||(28675662-28675749)
chr3 (88-175)||(51259906-51259993)
chr3 (88-174)||(26282513-26282599)
chr3 (88-173)||(29584749-29584834)
chr3 (88-175)||(4851582-4851669)
chr3 (88-175)||(53557921-53558008)
chr3 (88-173)||(25860547-25860632)
chr3 (88-172)||(21221486-21221570)
chr3 (88-175)||(1344833-1344920)
chr3 (88-171)||(3864800-3864883)
chr3 (88-175)||(39052965-39053052)
chr3 (88-173)||(2134944-2135029)
chr3 (94-175)||(43175441-43175522)
chr3 (96-173)||(47958566-47958643)
chr3 (88-167)||(12349297-12349376)
chr3 (88-175)||(51925333-51925420)
chr3 (88-171)||(53046767-53046850)
chr3 (88-174)||(22484868-22484954)
chr3 (107-176)||(21373811-21373880)
chr3 (88-175)||(31883147-31883234)
chr3 (88-168)||(50386581-50386661)
chr3 (88-175)||(5442163-5442250)
chr3 (128-175)||(20609799-20609846)
chr3 (88-175)||(24571154-24571240)
chr3 (128-175)||(34026554-34026601)
chr3 (88-174)||(38213227-38213313)
chr3 (128-175)||(3695438-3695485)
chr3 (88-175)||(10747090-10747177)
chr3 (128-175)||(20254947-20254994)
chr3 (88-170)||(25927453-25927536)
chr3 (88-139)||(40094411-40094462)
chr3 (88-169)||(3964167-3964248)
chr3 (128-172)||(44116829-44116873)
chr3 (119-175)||(45691056-45691112)
chr3 (97-169)||(52300359-52300430)
chr3 (99-171)||(54622929-54623001)
chr3 (88-175)||(33364903-33364990)
chr3 (88-127)||(44116859-44116898)
chr3 (88-134)||(42636529-42636575)
chr3 (128-168)||(3867809-3867849)
chr3 (88-116)||(34026598-34026626)
chr3 (123-175)||(54964042-54964094)
[»] scaffold0208 (1 HSPs)
scaffold0208 (88-175)||(2476-2563)
[»] scaffold0729 (1 HSPs)
scaffold0729 (88-173)||(4717-4796)
[»] scaffold0169 (2 HSPs)
scaffold0169 (88-174)||(12674-12760)
scaffold0169 (88-174)||(18192-18278)
[»] scaffold0025 (1 HSPs)
scaffold0025 (88-174)||(5577-5663)
[»] scaffold0014 (1 HSPs)
scaffold0014 (88-175)||(101820-101907)
[»] scaffold0098 (1 HSPs)
scaffold0098 (88-174)||(51311-51397)
[»] scaffold0027 (1 HSPs)
scaffold0027 (94-171)||(15047-15124)
[»] scaffold0360 (2 HSPs)
scaffold0360 (128-175)||(15540-15587)
scaffold0360 (91-124)||(15518-15551)
[»] scaffold0050 (1 HSPs)
scaffold0050 (104-175)||(43102-43173)
[»] scaffold0280 (1 HSPs)
scaffold0280 (131-175)||(13867-13911)
[»] scaffold0004 (1 HSPs)
scaffold0004 (128-172)||(373127-373171)
[»] scaffold0003 (1 HSPs)
scaffold0003 (131-175)||(338758-338802)
[»] scaffold0957 (1 HSPs)
scaffold0957 (88-147)||(2633-2692)
[»] scaffold0430 (1 HSPs)
scaffold0430 (181-245)||(687-751)
[»] scaffold0181 (1 HSPs)
scaffold0181 (128-172)||(19253-19297)


Alignment Details
Target: chr1 (Bit Score: 171; Significance: 1e-91; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 118 - 398
Target Start/End: Complemental strand, 16437315 - 16437037
Alignment:
Q  118 ctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc--cccttcatttgatttgttaaaaaataaaggactggacacg 215  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||   | ||||||||||||||||||||||||| |||||||||| |    
T  16437315 ctgttctatcttatactgttctgtccagtatttgctgttttacaaaccaaacacacctgacacttcatttgatttgttaaaaaataagggactggacagg 16437216  T
Q  216 acaaaaatatttgtactccgtttgatttatnnnnnnnnnnnnggacagcacaaatgaagtaatcaagacaggacaactatccgcttttttgtccatgcat 315  Q
    |||||||||| |||||| | ||||||||||            |||||||||||| |||||||    |||||||||||||||||||||||||| |||||||    
T  16437215 acaaaaatatctgtactgcctttgatttataaaaacaaaaaaggacagcacaaaagaagtaa----gacaggacaactatccgcttttttgttcatgcat 16437120  T
Q  316 tagttggggacaactttttgtccaacggtctactgttctaaatttacgttttcatccttcggtttctcgctgtatctctcgtg 398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16437119 tagttggggacaactttttgtccaacggtctactgttctaaatttacgttttcatccttcggtttctcgctgtatctctcgtg 16437037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 844931 - 845018
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  844931 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 845018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 42510492 - 42510405
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  42510492 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaatcaaacacaccc 42510405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 24339844 - 24339929
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  24339844 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctgttttgcagaccaaacacac 24339929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 41972879 - 41972792
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  41972879 ttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 41972792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 1351641 - 1351728
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  1351641 ttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtcaagtacttactgttttgcaaaccaaacacaccc 1351728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 7183885 - 7183798
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||  ||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7183885 ttgtcctgtattgttctgtcttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 7183798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 16386821 - 16386734
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  16386821 ttgtcctgtgctgttctgccttgtattgtactgttctatcttgtactgttctgtccaatacttgctgttttgcaaaccaaacacaccc 16386734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 12890202 - 12890120
Alignment:
Q  91 tcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||    
T  12890202 tcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtctagtacttactattttgcaaaccaaacacac 12890120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 16451094 - 16451009
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||||||||| ||||||| |||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16451094 ttgtcctgtgctattctgccatgtgttgtactattctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacac 16451009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 28340510 - 28340597
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  28340510 ttgtcatgtactgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttactgttttgtaaaccaaacacaccc 28340597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 26765007 - 26765082
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  26765007 tgttctgccttgtgttgtgttgttctatcttgtactgttctgtccagtacttactgttttgcaaatcaaacacacc 26765082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 38087202 - 38087285
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||||||| ||||||||| ||| |||||||||||||||||||    
T  38087202 ttgtcctgtgctgttctgccttatgttgtactgttctgtcttgtactgttatgtccagtacttaatgttttgcaaaccaaacac 38087285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 17887914 - 17887828
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||| |||| ||||||||||||||||||  |||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  17887914 ttgtcatgtgttgttctgccttgtgttgtattgttctatcttgtactattctgtcccgtacttactgttttgcaaaccaaacacacc 17887828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 50540307 - 50540226
Alignment:
Q  92 cctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||||||||||| | |||||||| |||||||||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  50540307 cctgtgctgttctgacgtgtgttgtactgttctatcttatactgttctgtcaagtacttactgttttgcaaaccaaacacac 50540226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 51264462 - 51264377
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| || || ||| ||||||||||||||||||    
T  51264462 ttgtcctgtgctattctgtcttgtgttgtactgttctatcttgtactgttctgtccaatacttgctgatttgcaaaccaaacacac 51264377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 6711253 - 6711341
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgc-aaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||  |||||||| |||||||||||||||    
T  6711253 ttgtcttgtgctgttctgccttgtgttgtactgttctattttgtactgttctgtccagtacttgatgttttgcaaaaccaaacacaccc 6711341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 39281862 - 39281775
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||| ||| ||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  39281862 ttgtcatgtgttgttatgcattgtgttgtgctgttctatcttatactattctgtccagtacttactgttttgcaaaccaaacacaccc 39281775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 45491082 - 45491167
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||| |||||||||||||||||||||||  ||||||||||| || |||||||||||||| || |||||||||| |||||||||||    
T  45491082 ttgtcatgtgctgttctgccttgtgttgtattgttctatcttatattgttctgtccagtaattgctgttttgcataccaaacacac 45491167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 32270312 - 32270240
Alignment:
Q  101 ttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||| |||||||||| |||||||||||||||||||| ||||||||| || ||||||||||||||||||||||    
T  32270312 ttctgtcttgtgttgtactgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacacac 32270240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 25539823 - 25539736
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||| ||||||||||||||||  |||| | |||||||||||| ||||||||| |||| |||||||||||||||| |||||    
T  25539823 ttgtcctgtgctattctgccttgtgttgtattgttatgtcttgtactgttatgtccagtacttaccgttttgcaaaccaaacgcaccc 25539736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 35387518 - 35387605
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||||| | || ||||||||| || ||||||||||||||||||| ||||    
T  35387518 ttgtcatgtgctgttctaccttgtgttgtactgttctatcttgtattattatgtccagtacttgctgttttgcaaaccaaacagaccc 35387605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 41968067 - 41968142
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||| ||||||||||||  |||||| |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  41968067 tgttccgccttgtgttgtgttgttctgtcttgtactgttctgtccagcacttactgttttgcaaaccaaacacacc 41968142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 50304619 - 50304532
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||| |||||| |||| ||||||| |||||||||||||||| | ||| || |||||||||||||||||| |||||    
T  50304619 ttgtcctgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctgttttgcaaaccaaacgcaccc 50304532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 51703380 - 51703455
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    |||| ||||||||||||| ||||| |||||||||||||| ||||||||| || |||||||||||||||||||||||    
T  51703380 tgttttgccttgtgttgttctgttatatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacacacc 51703455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 11772838 - 11772919
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    |||||||||||| ||||||||||||||||  |||| | |||||||||||| ||||||||| |||| ||||||||||||||||    
T  11772838 ttgtcctgtgctattctgccttgtgttgtgttgttatgtcttgtactgttatgtccagtacttaccgttttgcaaaccaaac 11772919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 17327856 - 17327940
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||||| || ||||||||||||| |||| |||||||||||| |||||||||||||| || ||||| ||||||||| ||||||||    
T  17327856 ttgtcctatgttgttctgccttgtattgtactgttctatcttatactgttctgtccaatacttacttttttgcaaatcaaacaca 17327940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 44738248 - 44738332
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||| |||| |||||| |||||||||||  ||||||||||| |||||||||||| |||| || |||||||||||||||||||||    
T  44738248 ttgtcatgtgttgttctaccttgtgttgtattgttctatcttctactgttctgtctagtacttgctgttttgcaaaccaaacaca 44738332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 6029507 - 6029594
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||| ||||||||||||| |||||||   || |||||| |||||||||| ||||| ||||||||||||||| |||||    
T  6029507 ttgtcctgtgctgttatgccttgtgttgtgctgttctgcattatactgtgctgtccagtacttactattttgcaaaccaaacgcaccc 6029594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 46154867 - 46154780
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||| ||| || |||||||| | |||||||||||| ||||||| ||||||||| |||||||||||||||| ||||||||||    
T  46154867 ttgtcatgtgccgttatgtcttgtgttatactgttctatcttatactgttttgtccagtacttactgttttgcaaactaaacacaccc 46154780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 31004100 - 31004019
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    |||||||||| |||||| |||||| |||  ||||||| |||||||||||||||| ||||| || ||||||||||||||||||    
T  31004100 ttgtcctgtgatgttctcccttgtattgcgctgttctttcttgtactgttctgtacagtacttgctgttttgcaaaccaaac 31004019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 6144192 - 6144276
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||| |||| ||||||||||| ||||||  ||  ||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  6144192 ttgtcttgtgatgttctgccttatgttgtgttgccctatcttgtactgttctgttcagtgattactgttttgcaaaccaaacaca 6144276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 3415067 - 3415146
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||| |||| || |||||||| |  ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  3415067 tgtgttgttttgtcttgtgttatattgttctatcttgtactgttttgtccagtacttactgttttacaaaccaaacacac 3415146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 16476361 - 16476448
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||| |||||| ||| ||  ||||||||||| || |||| ||||||||| |||||||||||||||||||||||||||    
T  16476361 ttgtcatgtggtgttatgccttatgtcgtgttgttctatcttatattgttatgtccagtacttactgttttgcaaaccaaacacaccc 16476448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 34663869 - 34663822
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  34663869 ttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 34663822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 1601115 - 1601049
Alignment:
Q  108 ttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    |||||||||  |||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  1601115 ttgtgttgtgttgttctttcttgtactgttttgtccagtacttactgttttgcagaccaaacacacc 1601049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 10384335 - 10384253
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaaca 170  Q
    |||||| ||| |||| |||| |||||||| ||||||  |||||||||||| || |||||| ||||||||||||||||||||||    
T  10384335 ttgtccagtgttgttttgccctgtgttgtgctgttcggtcttgtactgttatgcccagtacttactgttttgcaaaccaaaca 10384253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 42512976 - 42513060
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||| |||||| |||| ||||||| |||||||||||||||| | ||| |   ||||||||||||||||| |||||    
T  42512976 ttgtcctgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtact---tgttttgcaaaccaaacgcaccc 42513060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 455 - 498
Target Start/End: Complemental strand, 16436980 - 16436937
Alignment:
Q  455 cttccagttattgtttgcttacttaatcttttgtctccattcat 498  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  16436980 cttccagttattgtttgcttactttatcttttgtctccattcat 16436937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 26118447 - 26118494
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||    
T  26118447 ttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 26118494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 30105912 - 30105959
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||    
T  30105912 ttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 30105959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 15540096 - 15540165
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttt 157  Q
    ||||| |||| |||| ||||||||||||| |||||||   |||||||||||||||||||| |||||||||    
T  15540096 ttgtcatgtgttgttatgccttgtgttgtgctgttctgcattgtactgttctgtccagtacttactgttt 15540165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 23799670 - 23799751
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    ||||| |||| |||||| |||||| ||||  |||||| |||||||||||||| | ||||| ||||||||||| |||||||||    
T  23799670 ttgtcatgtgttgttctcccttgtattgtgttgttctttcttgtactgttctatacagtacttactgttttgtaaaccaaac 23799751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 8838887 - 8838820
Alignment:
Q  107 cttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||||||  |||||| |||| ||| ||| |||| |||||||||||||||||||||||||| ||||    
T  8838887 cttgtgttgtgttgttctgtcttatacagttatgtctagtatttactgttttgcaaaccaaacgcacc 8838820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 25343426 - 25343480
Alignment:
Q  119 tgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||| |||||||| ||| |||| |||| |||||||||||||||||||||||||    
T  25343426 tgttctgtcttgtacggttatgtctagtagttactgttttgcaaaccaaacacac 25343480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 38663100 - 38663014
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    |||||||||| |||||| |||| | ||||  |||||| |||||||||||| ||| | ||| || |||||||||||||||||| ||||    
T  38663100 ttgtcctgtgttgttctcccttatattgtgttgttctttcttgtactgttttgtactgtacttgctgttttgcaaaccaaacgcacc 38663014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 26118422 - 26118458
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttct 124  Q
    ||||||||||||||||||||||||||||| |||||||    
T  26118422 ttgtcctgtgctgttctgccttgtgttgtactgttct 26118458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 5109660 - 5109614
Alignment:
Q  126 tcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||||||| ||| |||||||| |||||||||| |||||||||||||    
T  5109660 tcttgtactcttcagtccagtacttactgttttacaaaccaaacaca 5109614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 570348 - 570267
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||| |||||||| || ||||||  |||||||||||||||| || |||| | || ||||||||||||| | ||||| |||||    
T  570348 tgtgttgttctgctttatgttgtgttgttctatcttgtactattttgtctaatacttactgttttgcacatcaaacgcaccc 570267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 21071662 - 21071609
Alignment:
Q  123 ctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacccc 176  Q
    |||||||||||||||  |||||||| |||||||||| ||||| ||||| |||||    
T  21071662 ctatcttgtactgtttagtccagtacttactgttttacaaacaaaacatacccc 21071609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 39717351 - 39717290
Alignment:
Q  113 ttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||||| ||||| ||||| |||||||| | || |||||||||||| || ||||||||||    
T  39717351 ttgtcctgtactatcctgtacagttctgtctaatacttactgttttgcgaatcaaacacacc 39717290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 17827905 - 17827953
Alignment:
Q  124 tatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||||||||||||| ||||| |  |||||||||| |||||||||||||    
T  17827905 tatcttgtactgttcagtccaatccttactgttttccaaaccaaacaca 17827953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 28502417 - 28502329
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacccc 176  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28502417 ttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacacccc 28502329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 29814823 - 29814735
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacccc 176  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29814823 ttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacacccc 29814735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 11212215 - 11212131
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  11212215 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttgctgttttgcaaaccaaacaca 11212131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 17443221 - 17443135
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  17443221 ttgtcctgtgctgttatgccttgtgttgtgttgttctatcttgtactgttctgtccaatatttgctgttttgcaaaccaaacacacc 17443135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 32410023 - 32410111
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacccc 176  Q
    ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| |||||||    
T  32410023 ttgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctgtctagtatttactgttttgcaaatcaaagacacccc 32410111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 15277108 - 15277195
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  15277108 ttgtcatgtgttgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 15277195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 24242622 - 24242535
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  24242622 ttgtcctgtgctgttctgccttgtgttgtactcttttatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacataccc 24242535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 32805436 - 32805349
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  32805436 ttgtcatgtgctgttctgccttgtgttgtattgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaaacacaccc 32805349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 17867793 - 17867712
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  17867793 ttgtcctgtgttgttctgccttgtgttgtactgttctatgttgtactgttctgtccagtacttgctgttttgcaaaccaaac 17867712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 17877576 - 17877495
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  17877576 ttgtcctgtgttgttctgccttgtgttgtactgttctatgttgtactgttctgtccagtacttgctgttttgcaaaccaaac 17877495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 24203321 - 24203236
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||| || || ||||||||||||||||||||||    
T  24203321 ttgtcctgtgctgttttgccttgtgttgtactgttctatcatgtactgttctgtccaatacttgctgttttgcaaaccaaacacac 24203236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 11382040 - 11381964
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  11382040 tgttctgccttgtgttgtactgttctatcttgtactgttctgttcagtacttactattttgcaaaccaaacacaccc 11381964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 4494269 - 4494352
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    |||||||||| ||||||||||| |||||| |||||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  4494269 ttgtcctgtgttgttctgccttatgttgtgctgttctatcctgtactgttctgtctagtacttactgttttgcaaaccaaacac 4494352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 3259635 - 3259549
Alignment:
Q  89 tgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| |  || ||||||||||||||||||||||||    
T  3259635 tgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatccttgctgttttgcaaaccaaacacaccc 3259549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 2614854 - 2614767
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||||||||||||||| |||||||||||| ||||||| ||||||||| ||  |||||||||||||||||||||||    
T  2614854 ttgtcatgtgttgttctgccttgtgttgtactgttctatcttatactgttttgtccagtacttgttgttttgcaaaccaaacacaccc 2614767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 10959959 - 10959872
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||||||||||| |||  |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  10959959 ttgtcatgtgttgttctgccttgtgctgtgatgttctgtcttgtactgttctatccagtacttactgttttgcaaaccaaacacaccc 10959872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 18057478 - 18057396
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaaca 170  Q
    |||||||||||| || ||||||||||||| |||||||||||| ||||||||| |||| || ||||||||||||||||||||||    
T  18057478 ttgtcctgtgctattatgccttgtgttgtgctgttctatcttttactgttctatccaatacttactgttttgcaaaccaaaca 18057396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 10324282 - 10324358
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaac 164  Q
    |||| |||||||||||| |||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  10324282 ttgttctgtgctgttctaccttgtgttgtaatgttctatcttgtactgttctgtccggtacttactgttttgcaaac 10324358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 14925626 - 14925713
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||| |||||||||||||  ||||||||||| ||||||| ||||| ||| |||||  ||||||||||||||||||||    
T  14925626 ttgtcctgtgctgttatgccttgtgttgtgttgttctatcttttactgttatgtcccgtacttacttctttgcaaaccaaacacaccc 14925713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 23636170 - 23636097
Alignment:
Q  100 gttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||||||| ||||||  |||||| |||||||||||| | |||||||||||||||||||||||||||||||||    
T  23636170 gttctgccttctgttgtgttgttctgtcttgtactgttatatccagtatttactgttttgcaaaccaaacacac 23636097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 11279075 - 11279012
Alignment:
Q  110 gtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||||| |||||||||||||||||||||| ||||||| || ||||||||||||||||||||||    
T  11279075 gtgttgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaaacacac 11279012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 11613968 - 11614034
Alignment:
Q  109 tgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||| |||||||||| |||||||||||||||| || || ||||||||||||||||||||||||    
T  11613968 tgtgttgtactgttctatcgtgtactgttctgtccaatacttgctgttttgcaaaccaaacacaccc 11614034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 14808170 - 14808254
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    |||||||||||| |||| |||||| ||||  |||||| |||||||||||||||| || |||||  ||||||||||||||||||||    
T  14808170 ttgtcctgtgctattctcccttgtattgtgttgttctttcttgtactgttctgtacaatatttgttgttttgcaaaccaaacaca 14808254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 34684159 - 34684243
Alignment:
Q  91 tcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||| |||| |||||| ||||||  ||| || |||||||||||| |||||| || |||||||||||||||||||||||||||    
T  34684159 tcctgtgttgttatgccttatgttgtgttgtcctgtcttgtactgttttgtccaatacttactgttttgcaaaccaaacacaccc 34684243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 8178053 - 8178140
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||| |||||||| |||||||||| || |||||||||||| |||||| ||||||  ||  |||||||||||||||||||||||    
T  8178053 ttgtcatgtactgttctgtcttgtgttgtgctattctatcttgtattgttctatccagtgcttcatgttttgcaaaccaaacacaccc 8178140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 15277451 - 15277522
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttg 159  Q
    |||| ||||| |||| | ||||||||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  15277451 ttgttctgtgttgttttaccttgtgttgtactgttctatcttatactgttctgtccagtacttactgttttg 15277522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 3932978 - 3933064
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||||||||||| || |||||||||| |||||||||||| ||||||| | |||| || ||  | ||||||||||||||||||||    
T  3932978 ttgtcctgtgctgttttgtcttgtgttgtactgttctatcttatactgttttatccaatacttgttattttgcaaaccaaacacacc 3933064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 32132551 - 32132597
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtact 134  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  32132551 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtact 32132597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 167119 - 167166
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||    
T  167119 ttgtactgttctgtccagtatttactgttttgcacatcaaacacaccc 167166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 6625039 - 6625088
Alignment:
Q  183 tttgatttgttaaaaaataaaggactggacacgacaaaaatatttgtact 232  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  6625039 tttgatttgttaaaatataagggactggacaggacaaaaatatttgtact 6625088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 32860004 - 32859923
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||| | ||||  ||| ||||||||||||||| |||||| || |||||||| | |||| |||||||||||    
T  32860004 tgtgctgttctgccttatattgtgttgtcctatcttgtactgttatgtccaatacttactgttctacaaatcaaacacaccc 32859923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 10485116 - 10485029
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacccc 176  Q
    |||||||||| |||| | |||||| |||| ||||||| |||||||||||||||| | ||| || ||||||| |||||||||| ||||||    
T  10485116 ttgtcctgtgttgtt-tcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctgttttacaaaccaaacgcacccc 10485029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 29054311 - 29054239
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaacca 166  Q
    |||||||||||| ||| ||||||  ||| ||||||||||||||| ||||||||| ||| | ||||||||||||    
T  29054311 tgtgctgttctgtcttatgttgtgttgtcctatcttgtactgttatgtccagtacttattattttgcaaacca 29054239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 34176763 - 34176716
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| |||| |||||||||||||||| |||||    
T  34176763 ttgtactgttctgtccagtacttaccgttttgcaaaccaaacccaccc 34176716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 18597334 - 18597408
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaa 168  Q
    |||| |||||| ||| |||||||  ||||||   ||||||||||||||||| || |||||||||| |||||||||    
T  18597334 tgtgttgttctacctagtgttgtgttgttctgctttgtactgttctgtccaatacttactgttttacaaaccaaa 18597408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 3379660 - 3379583
Alignment:
Q  98 ctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||| |||||||||  | |||| ||||||| ||||||||||  || || | ||||||||||||||||| ||||    
T  3379660 ctgttctgcattgtgttgtgttattctgtcttgtattgttctgtccgatacttgcggttttgcaaaccaaacaaaccc 3379583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 167094 - 167130
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttct 124  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  167094 ttgtcatgtgctgttctgccttgtgttgtactgttct 167130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 6e-35; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 41709735 - 41709648
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  41709735 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtattgttctgtccagtacttactgttttgcaaaccaaacacaccc 41709648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 45446413 - 45446326
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45446413 ttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 45446326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 32303732 - 32303819
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  32303732 ttgtcctgtgctgttctgccttttgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 32303819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 32020148 - 32020233
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  32020148 ttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 32020233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 8673202 - 8673289
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  8673202 ttgtcctgtgctgttttgccttgtgttgtactgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacacaccc 8673289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 6386528 - 6386447
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  6386528 tgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaaccaaacacaccc 6386447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 31513730 - 31513817
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  31513730 ttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtccaatacttactgttttgcaaaccaaacacaccc 31513817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 34101466 - 34101379
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||||    
T  34101466 ttgtcctgtgatgttctgccttgtgttgtactgttctatcttatactgttttgtccagtacttacttttttgcaaaccaaacacaccc 34101379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 13407082 - 13407167
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||| |||| |||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  13407082 ttgtcatgtgttgttctgccttgtgttgtactgttctatattgtactgttctgtccagtacttactgttttgtaaaccaaacacac 13407167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 3251803 - 3251890
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||| ||||||||||||||||||||| |||||||||||| || ||||||||||  || |||||||||||||||||||||||||||    
T  3251803 ttgtcctatgctgttctgccttgtgttgtactgttctatcttatattgttctgtccgatacttactgttttgcaaaccaaacacaccc 3251890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 15001419 - 15001344
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  15001419 tgtgttgttctgccttgtgttgtgctgttctgtcttgtactgttctgtccagtacttactgttttgcaaaccaaac 15001344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 27103917 - 27103830
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||    
T  27103917 ttgtcatgtgctgttctgccttgtgttgtaatgttctatcttgtactgttctgtccagtacttgttgttttgcaaatcaaacacaccc 27103830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 31732022 - 31731935
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||||| ||||| |||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  31732022 ttgtcatgtgctattctgtcttgtgttgtactgttctatcttatacttttctgtccagtacttactgttttgcaaaccaaacacaccc 31731935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 21272671 - 21272588
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||||| ||||||||||| || || ||||||||||||||||||||    
T  21272671 ttgtcctatgctgttctgccttgtgttgtactgatctatcttgtattgttctgtccaatacttgctgttttgcaaaccaaacac 21272588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 29563373 - 29563460
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||| ||||||||||| |||||||||||||||||||||||| || || || ||||||||||||||||||||||||    
T  29563373 ttgtcatgtgttgttctaccttgtgttgtactgttctatcttgtactgttctgttcaatacttgctgttttgcaaaccaaacacaccc 29563460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 29672470 - 29672557
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| ||||||| |||||||||  ||||||||||||||| |||||||||||||  |||||||||| ||||||||||||||||    
T  29672470 ttgtcctgtgttgttctgtcttgtgttgcactgttctatcttgtattgttctgtccagttcttactgttttacaaaccaaacacaccc 29672557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 34063086 - 34062999
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| ||| ||||||| |||||| |||||||||||||||||||||||||||||| || | ||||||||||||||||||||||    
T  34063086 ttgtcatgtgttgtgctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgcggttttgcaaaccaaacacaccc 34062999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 45114008 - 45113929
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||| |||| ||||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  45114008 tgtgttgttatgccttgtgttgtgctgctctatcttgtactgttatgtccagtacttactgttttgcaaaccaaacacac 45113929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 7394961 - 7395045
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||||| |||||||||| |||||||||| |||||||||||| || ||||||||| ||||  |||||||||||||||||||||||    
T  7394961 ttgtcctatgctgttctgtcttgtgttgtactgttctatcttatattgttctgtcaagtacctactgttttgcaaaccaaacaca 7395045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 37618538 - 37618625
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| ||||| | | |||||||||| ||||||||| |||| |||||||||||||||| |||||    
T  37618538 ttgtcatgtgctgttctgccttgtgttgtgctgttatgttttgtactgttatgtccagtacttaccgttttgcaaaccaaacgcaccc 37618625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 955094 - 955168
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| |||| || |||||||| |||||||||||||    
T  955094 tgttctgtcttgtgttgtactgttctatcttgtactgttctgtcaagtacttgctgttttgtaaaccaaacacac 955168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 17805648 - 17805563
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||||||| |||||| |||||||||||  | |||| |||||||||||| |||| |||| |||||||||||||||||||||||||    
T  17805648 ttgtcctgtgttgttctaccttgtgttgtgttattctgtcttgtactgttttgtcaagtacttactgttttgcaaaccaaacacac 17805563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 25478196 - 25478119
Alignment:
Q  98 ctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||  ||||||||||| ||||||| |||| |||| |||||||||| ||||||||||||||||    
T  25478196 ctgttctgccttgtgttgtattgttctatcttatactgttttgtcaagtacttactgttttacaaaccaaacacaccc 25478119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 35225621 - 35225537
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||| |||| ||||||| ||||||||||  ||| || ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  35225621 ttgtcttgtgttgttctgtcttgtgttgtgttgtcctgtcttgtactattctgtccagtacttactgttttgcaaaccaaacaca 35225537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 12753472 - 12753554
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    ||||| |||| ||||||| ||||||||||  |||||||||||||||||||||||||| || || ||||||||||||||||||||    
T  12753472 ttgtcatgtgttgttctgtcttgtgttgtattgttctatcttgtactgttctgtccaatactt-ctgttttgcaaaccaaacac 12753554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 5969011 - 5969067
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtcca 144  Q
    ||||||| || |||||||||||||||||| |||||||||||||||||||||||||||    
T  5969011 ttgtcctatgttgttctgccttgtgttgtactgttctatcttgtactgttctgtcca 5969067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 40388996 - 40388912
Alignment:
Q  91 tcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||| |||||||||||||||||| ||||| | ||||||||| || ||||||||| ||||  ||||||||||||||| |||||    
T  40388996 tcctgtgttgttctgccttgtgttgtgctgttatgtcttgtactcttatgtccagtacttaccattttgcaaaccaaacgcaccc 40388912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 4052415 - 4052368
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||    
T  4052415 ttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 4052368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 14005216 - 14005263
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||    
T  14005216 ttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 14005263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 22999216 - 22999129
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||| |||||||||||| |||||| |||| ||||||| |||||||||||| |||   ||| || |||||||||||||||||| |||||    
T  22999216 ttgttctgtgctgttctcccttgtattgtgctgttctttcttgtactgttttgtattgtacttgctgttttgcaaaccaaacgcaccc 22999129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 37861814 - 37861767
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  37861814 ttgtactgttctgtccagtacttactgttttgcaaatcaaacacaccc 37861767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 17520560 - 17520468
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatctt-----gtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||| |||||||| ||||||||||  | |||| ||||     || ||||||||||||||| ||||||||||||||||||| |||||||    
T  17520560 ttgtcctgtactgttctgtcttgtgttgtgttattctgtcttcttctgttctgttctgtccagtacttactgttttgcaaaccaaccacaccc 17520468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 30543194 - 30543239
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||    
T  30543194 ttgtactgttctgtccaatacttactattttgcaaaccaaacacac 30543239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 4052440 - 4052404
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttct 124  Q
    ||||||||||||||||||||||||||||| |||||||    
T  4052440 ttgtcctgtgctgttctgccttgtgttgtactgttct 4052404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 7591593 - 7591641
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgt 136  Q
    ||||||||||||||||| |||||| |||| ||||||| |||||||||||    
T  7591593 ttgtcctgtgctgttctcccttgtattgtactgttctttcttgtactgt 7591641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 37664455 - 37664499
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    |||||||||||||||||||  || |||||||||||||||||||||    
T  37664455 ttgtactgttctgtccagtgcttgctgttttgcaaaccaaacaca 37664499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 30501104 - 30501017
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||| || |||| || ||| ||||||  |||||| ||||||||| || |||| |||||||  ||||||||||||||||| |||||    
T  30501104 ttgtcctatggtgttttgtcttatgttgtgttgttctgtcttgtactattatgtcaagtatttgttgttttgcaaaccaaacgcaccc 30501017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 32918838 - 32918772
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaacc 165  Q
    ||||||||| ||||||||  |||| | |||||||||||| |||| ||||||||| ||||||| ||||    
T  32918838 tgttctgccctgtgttgtgttgttatgtcttgtactgttatgtcaagtatttaccgttttgccaacc 32918772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 16595308 - 16595369
Alignment:
Q  101 ttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaa 162  Q
    |||||||||||||| |  |||||| |||| |||||||||||||||||  |||||||| ||||    
T  16595308 ttctgccttgtgttttgttgttctgtcttatactgttctgtccagtacatactgtttagcaa 16595369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 30543169 - 30543205
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttct 124  Q
    |||||||||| |||||||||||||||||| |||||||    
T  30543169 ttgtcctgtgttgttctgccttgtgttgtactgttct 30543205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 37474678 - 37474598
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaa 168  Q
    ||||| ||||||||| | |||||| |||| ||||||| |||||||||| | | | | ||| || |||||||||||||||||    
T  37474678 ttgtcatgtgctgttatcccttgtattgtgctgttctttcttgtactgctatatgctgtacttgctgttttgcaaaccaaa 37474598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 37861839 - 37861803
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttct 124  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  37861839 ttgtcatgtgctgttctgccttgtgttgtactgttct 37861803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 39642811 - 39642755
Alignment:
Q  119 tgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||| ||||||||| |||||| || || ||||| ||||||||||||||| |||||    
T  39642811 tgttctttcttgtactattctgtacaatacttactattttgcaaaccaaacgcaccc 39642755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 6e-35; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 36769702 - 36769789
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36769702 ttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 36769789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 3922836 - 3922923
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  3922836 ttgtcctgtgctgttctgccttgtgttgtactggtctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 3922923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 10932690 - 10932777
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10932690 ttgtcctatgctgttctgccgtgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 10932777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 26994358 - 26994444
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || |||||||||||||||||||||||    
T  26994358 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtcctgttctgtccagtactttctgttttgcaaaccaaacacacc 26994444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 18470646 - 18470563
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  18470646 ttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacac 18470563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 30599141 - 30599228
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  30599141 ttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgtaaaccaaacacaccc 30599228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 30849379 - 30849464
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  30849379 ttgtcctgtgttgttctgtcttgtgttgtactgttctatcttgtactgttctgtcaagtacttactgttttgcaaaccaaacacac 30849464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 32873902 - 32873987
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  32873902 ttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 32873987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 21784833 - 21784749
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  21784833 ttgttctgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtccagtacttactgttttgcaaaccaaacaca 21784749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 11322018 - 11322105
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  11322018 ttgtcatgtactgttctgccttgtgttgtactgttctatcttgtactgttctgtccgatacttactgttttgcaaaccaaacacaccc 11322105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 12982265 - 12982178
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| || || |||||||||||||||||||||    
T  12982265 ttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctctccagtacttgctcttttgcaaaccaaacacaccc 12982178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 47947722 - 47947636
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||| | ||||||||||    
T  47947722 ttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcagagcaaacacacc 47947636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 47953152 - 47953066
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||| | ||||||||||    
T  47953152 ttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcagagcaaacacacc 47953066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 3892167 - 3892244
Alignment:
Q  96 tgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  3892167 tgctgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttactgttttgcaaaccaaatacac 3892244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 43189389 - 43189463
Alignment:
Q  101 ttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||    
T  43189389 ttctgccttgtgttgtactgttctatcttatactgttatgtccagtacttactgttttgcaaaccaaacacaccc 43189463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 46408852 - 46408771
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||| |||||||||||||||||| |||||||||||||||||||||| |||| || || ||||||||||||||||||||||||    
T  46408852 tgtgatgttctgccttgtgttgtactgttctatcttgtactgttctatccaatacttgctgttttgcaaaccaaacacaccc 46408771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 41211334 - 41211417
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    ||||||| || ||||||||||||||||||  ||||||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  41211334 ttgtcctatgttgttctgccttgtgttgtattgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacac 41211417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 46633659 - 46633572
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||| || |||||| || || ||||||||||||||||||||||||    
T  46633659 ttgtcttgtgttgttctgccttgtgttgtactgttctatcttgtactattatgtccaatacttgctgttttgcaaaccaaacacaccc 46633572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 47316835 - 47316901
Alignment:
Q  107 cttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  47316835 cttgtgttgtactgttctatcttgtaccgttctgtccagtacttactgttttgcaaaccaaacacac 47316901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 43158819 - 43158903
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||||| ||| || |||| || |||||||||||||||||||||    
T  43158819 ttgtcctgtactgttctgtcttgtgttgtactgttctatcttgtactgctctatctagtacttgctgttttgcaaaccaaacaca 43158903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 1870090 - 1870011
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||| |||||  | ||||||||||||||||||||||    
T  1870090 tgtgctgttctgccttgtgttgtactgttctatattgtactgttatgtacagtacatgctgttttgcaaaccaaacacac 1870011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 9913488 - 9913401
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||| |||||| ||||  |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  9913488 ttgtcatgtggtgttctcccttgtattgtgttgttctttcttgtactgttctgtacagtatttgctgttttgcaaaccaaacacaccc 9913401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 9927176 - 9927089
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||| |||||| ||||  |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  9927176 ttgtcatgtggtgttctcccttgtattgtgttgttctttcttgtactgttctgtacagtatttgctgttttgcaaaccaaacacaccc 9927089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 23349423 - 23349510
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||| |||| ||||||  ||||||||||||||||||| |||||| || ||||| |||||||||||||||||||||    
T  23349423 ttgtcatgtgctgttctaccttatgttgttttgttctatcttgtactgttatgtccattacttactattttgcaaaccaaacacaccc 23349510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 48894680 - 48894593
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||| |||||||| | ||||||||||| ||||||  |||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  48894680 ttgtccagtgctgttttaccttgtgttgtactgttcggtcttgtactgttatgtcaaatatttactgttttgcaaaccaaacacaccc 48894593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 329433 - 329352
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    ||||| ||| ||||| ||||||||||||| |||||||   |||||||||||||||||||| |||||||||||||||||||||    
T  329433 ttgtcatgtactgttatgccttgtgttgtgctgttctgcattgtactgttctgtccagtacttactgttttgcaaaccaaac 329352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 43368164 - 43368077
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||| |||||| |||| ||||||| |||||||||||||||| | ||| || |||||||||||||||||| |||||    
T  43368164 ttgtcatgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctgttttgcaaaccaaacgcaccc 43368077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 16963034 - 16962987
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16963034 ttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 16962987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 18386487 - 18386400
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| ||||||||||||||||||  |||||||| |||||| ||| |||||| || || |||||||||||||||||| |||||    
T  18386487 ttgtcatgtgttgttctgccttgtgttgtattgttctattttgtaccgttttgtccaatacttgctgttttgcaaaccaaactcaccc 18386400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 34117404 - 34117349
Alignment:
Q  119 tgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  34117404 tgttctgtcttgtactgttatgtccagtacttactgttttgcaaaccaaacacacc 34117349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 40753092 - 40753045
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  40753092 ttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 40753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 11822194 - 11822116
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaacca 166  Q
    ||||||| || ||||||||||||||||||  |||||||| || ||||||| ||| ||||| ||||||||||||||||||    
T  11822194 ttgtcctatgttgttctgccttgtgttgtgttgttctattttatactgttatgttcagtacttactgttttgcaaacca 11822116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 22724669 - 22724739
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaac 164  Q
    |||| ||||||||||| ||||||  | ||||||||||||||||||||||||||| ||||| ||||||||||    
T  22724669 tgtgttgttctgccttatgttgtgatattctatcttgtactgttctgtccagtacttactattttgcaaac 22724739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 26371942 - 26372017
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaa 163  Q
    ||||| |||| |||||||  || |||||| |||||||||||||||||||| ||||||||| |||||||||| ||||    
T  26371942 ttgtcatgtgatgttctgttttatgttgtactgttctatcttgtactgttatgtccagtacttactgtttttcaaa 26372017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 34295536 - 34295623
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||| |||||| ||||  |||||| |||||||||||| ||| | ||| || |||||||||||||||||| |||||    
T  34295536 ttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttttgtactgtacttgctgttttgcaaaccaaacgcaccc 34295623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 38301306 - 38301224
Alignment:
Q  93 ctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||||| |||||| ||||  |||||| |||||||||||||||| | ||| ||  |||||||||||||||||||||||    
T  38301306 ctgtgttgttctcccttgtattgtgttgttctttcttgtactgttctgtactgtacttgttgttttgcaaaccaaacacaccc 38301224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 21133333 - 21133248
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||| ||||| ||||||||||||||||||  |||||| ||||||| |||| |||  |||| ||||| |||||| ||||||||||||    
T  21133333 ttgtactgtgttgttctgccttgtgttgtgatgttctttcttgtattgttatgtatagtacttactattttgccaaccaaacacac 21133248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 26910539 - 26910624
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||| || |||||||| ||||||||| |  ||| ||||| | || |||| ||||||||| |||||||||||||||||||||||||    
T  26910539 ttgtcttgcgctgttctaccttgtgttatgatgtcctatcctatattgttatgtccagtacttactgttttgcaaaccaaacacac 26910624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 20127248 - 20127163
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||||||||||  ||||||||||  |||| | |||||||||||||| ||  ||| ||||||||||||||||||||| |||||    
T  20127248 ttgtcatgtgctgttctatcttgtgttgtgttgttttgtcttgtactgttctatc--gtacttactgttttgcaaaccaaacgcaccc 20127163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 22631675 - 22631609
Alignment:
Q  108 ttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    |||||||||  |||| | ||||||||||||||||||| || ||| |||||||||||| |||||||||    
T  22631675 ttgtgttgtgttgttatgtcttgtactgttctgtccaatacttattgttttgcaaacgaaacacacc 22631609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 22724170 - 22724244
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaa 168  Q
    |||| ||||||||||| ||||||  ||| ||||||| |||| || ||||| ||||||||| ||||||||||||||    
T  22724170 tgtgttgttctgccttatgttgtgttgtcctatcttatactattttgtccggtatttactattttgcaaaccaaa 22724244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 43214057 - 43214139
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||| ||||||||||| ||||| | ||||| |||||| |     ||| ||  |||||||||||||||||||||||    
T  43214057 ttgtcctgtgctgttctaccttgtgttgtgctgttttgtcttgcactgttat-----gtacttgttgttttgcaaaccaaacacaccc 43214139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 48445484 - 48445405
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaa 167  Q
    ||||| |||| |||| |||||||||||||  |||| |   |||||||||| ||||||||| ||||||| |||||||||||    
T  48445484 ttgtcatgtgttgttatgccttgtgttgtgttgttatgcattgtactgttttgtccagtacttactgtcttgcaaaccaa 48445405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 41665707 - 41665789
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaaca 170  Q
    ||||| |||||| || ||| || |||||| |||| |||||||||| |||| ||| | ||| ||||||||||| ||||||||||    
T  41665707 ttgtcttgtgctattatgcgttatgttgtgctgtcctatcttgtattgttatgttccgtacttactgttttgtaaaccaaaca 41665789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 172
Target Start/End: Complemental strand, 17237038 - 17237005
Alignment:
Q  139 tgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||||||| ||||||||||||||||||||||||    
T  17237038 tgtccagtacttactgttttgcaaaccaaacaca 17237005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 46448799 - 46448848
Alignment:
Q  126 tcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||| |||| |||| ||||| ||||||||||||||| |||||    
T  46448799 tcttgtactgttatgtcaagtacttactattttgcaaaccaaacgcaccc 46448848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 6e-35; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 24002299 - 24002212
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  24002299 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 24002212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 9807118 - 9807031
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  9807118 ttgtcctgtgctgttatgccttgtgttgtgctgttctatcttgtactgttctgtccagtacttactattttgcaaaccaaacacaccc 9807031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 21579987 - 21579900
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  21579987 ttgtcctgtgttgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttactgttttgcaaaccaaacacaccc 21579900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 43641060 - 43640973
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  43641060 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtctagtacttgctgttttgcaaaccaaacacaccc 43640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 49152224 - 49152311
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||    
T  49152224 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 49152311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 20802656 - 20802743
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  20802656 ttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgttcagtacttgctgttttgcaaaccaaacacaccc 20802743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 23521841 - 23521754
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  23521841 ttgtcatgtgctgttctgccttgtgttgtactgttttatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 23521754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 52319287 - 52319200
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  52319287 ttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaaacacaccc 52319200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 12600840 - 12600761
Alignment:
Q  95 gtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  12600840 gtgctgttctgacttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacacc 12600761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 37865714 - 37865627
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  37865714 ttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttatgtcccgtacttactgttttgcaaaccaaacacaccc 37865627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 14296558 - 14296471
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||||| ||| ||||||||||| |||||||||||    
T  14296558 ttgtcctgtgctgttctgctttgtgttgtactgttctatattgttctgttctgtccagtacttattgttttgcaaatcaaacacaccc 14296471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 29785662 - 29785749
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||| ||| ||||||||||| |||||||||||    
T  29785662 ttgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctgttcagtacttattgttttgcaaatcaaacacaccc 29785749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 56154582 - 56154495
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||  |||||||||||||||||||||||    
T  56154582 ttgtcatgtactgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgttgttttgcaaaccaaacacaccc 56154495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 6776539 - 6776460
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||      ||||||||||||||||||||||    
T  6776539 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccag------ctgttttgcaaaccaaacacac 6776460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 14314806 - 14314719
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||||| ||| ||||| ||||| |||||||||||    
T  14314806 ttgtcctgtgctgttctgctttgtgttgtactgttctatattgttctgttctgtccagtacttattgtttagcaaatcaaacacaccc 14314719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 21202701 - 21202614
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||  ||||||||| ||||||| |||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  21202701 ttgtcatgtgctgttctgttttgtgttgtgctgttctgtcttgtactgttttgtccagtacttactattttgcaaaccaaacacaccc 21202614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 55065457 - 55065543
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||||||||||||||||||||||||| || || |||||| ||||||| ||||||||| || |||||||||||||||||| ||||    
T  55065457 ttgtcctgtgctgttctgccttgtgttgtactattttatcttatactgttatgtccagtacttgctgttttgcaaaccaaacgcacc 55065543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 33177157 - 33177244
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||| || ||||||| |||||||||| |||||||||||| |||||||||||| |||| |||| |||||||||||||| |||||||    
T  33177157 ttgtcctttgttgttctgtcttgtgttgtactgttctatcttatactgttctgtcaagtacttaccgttttgcaaaccaagcacaccc 33177244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 34929876 - 34929789
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| || || ||| |||||||||| |||| ||| ||||||||||||||||||||||| ||||    
T  34929876 ttgtcatgtgctgttctgccttgtgttgtactattttattttgtactgttttgtctagtttttactgttttgcaaaccaaacataccc 34929789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 38486382 - 38486464
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||||||||     ||||||||||||| ||||||||||| |||| |||||||||||||||| ||||||||||    
T  38486382 ttgtcctgtgctgttctgccttgtg-----ctgttctatcttgcactgttctgtctagtacttactgttttgcaaacgaaacacaccc 38486464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 2786919 - 2786839
Alignment:
Q  95 gtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||| |||||| ||||||  |||||  |||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  2786919 gtgctgttttgccttatgttgtgttgttcggtcttgtactgttatgtccagtacttactgttttgcaaaccaaacacaccc 2786839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 20694332 - 20694250
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||||| ||||||||||||||||     |||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  20694332 ttgtcatgtgctattctgccttgtgttgt-----tctatcttgtactgttctatccattacttactgttttgcaaaccaaacacaccc 20694250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 29592857 - 29592775
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||| ||||||||||||||||||| ||||     ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  29592857 ttgtcttgttctgttctgccttgtgttgttctgt-----cttgtactgatatgtccagtatttactgttttgcaaaccaaacacaccc 29592775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 46680645 - 46680700
Alignment:
Q  118 ctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  46680645 ctgttctatcttgtactgttctgtccagtacttactattttgcaaaccaaacacac 46680700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 36885886 - 36885820
Alignment:
Q  109 tgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||| ||||||||||||||||||||||||| |||| |  ||||||||||||||||||||||||    
T  36885886 tgtgttgtactgttctatcttgtactgttctgtctagtactcgctgttttgcaaaccaaacacaccc 36885820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 42869925 - 42869859
Alignment:
Q  106 ccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    |||| |||||| ||||||||||||||||||||||||| |||| || |||||||||||||||||||||    
T  42869925 ccttatgttgtactgttctatcttgtactgttctgtcgagtacttgctgttttgcaaaccaaacaca 42869859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 55593835 - 55593759
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttct---gtccagtatttactgttttgcaaaccaaacaca 172  Q
    |||||||||||||||||| ||||||||||||||||||||||   |||||||| |||||| ||| |||||||||||||    
T  55593835 tgttctgccttgtgttgtactgttctatcttgtactgttctgtcgtccagtacttactgatttacaaaccaaacaca 55593759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 52949683 - 52949602
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    |||||||||||| |||| |||||| |||| ||||||| |||||||||||||||| | ||| || ||||||||||||||||||    
T  52949683 ttgtcctgtgctattctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctgttttgcaaaccaaac 52949602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 37931882 - 37931798
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||| |||||||||||||||||| || |  | || | |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  37931882 ttgtcttgtgctgttctgccttgtattatgttattatgtcttgtactgttatgtccagtacttactgttttgcaaaccaaacaca 37931798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 9512465 - 9512552
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||||| ||||| ||| |||||  || ||||||||||||||||||||||  ||| || ||||||||||||||||||||||||    
T  9512465 ttgtcatgtgctattctgtcttttgttgcactattctatcttgtactgttctgtcacgtacttgctgttttgcaaaccaaacacaccc 9512552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 36743813 - 36743900
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||||||||||||||| ||||||  | ||||||||||||| ||||| || |||| ||||| |||| ||||||||||||||||    
T  36743813 ttgtcttgtgctgttctgccttatgttgtattattctatcttgtaccgttctatctagtacttactatttttcaaaccaaacacaccc 36743900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 50729650 - 50729737
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||| |||||||||| ||||||||||||| |||||||   || |||||| | |||||||||||||| ||||||||||||||| |||||    
T  50729650 ttgttctgtgctgttatgccttgtgttgtgctgttctgcattatactgtgccgtccagtatttactattttgcaaaccaaacgcaccc 50729737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 32181215 - 32181161
Alignment:
Q  118 ctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  32181215 ctgttctatcttgtattgttctatccagtacttactgttttgcaaaccaaacaca 32181161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 50178617 - 50178699
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaaca 170  Q
    |||||||||| |||||| |||||| ||||  |||||| |||||||||||||||| | ||| || |||||||||||||||||||    
T  50178617 ttgtcctgtgatgttctcccttgtattgtgatgttctttcttgtactgttctgtactgtacttgctgttttgcaaaccaaaca 50178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 20518147 - 20518196
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgtt 137  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  20518147 ttgtcctgtgctgttctgccttgtgttgtactattctatcttgtactgtt 20518196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 22318508 - 22318589
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    ||||| |||| |||| || |||||||||| |||||||   ||||||| |||||||||||| |||||||||||||||||||||    
T  22318508 ttgtcatgtgttgttatgtcttgtgttgtgctgttctgcattgtactcttctgtccagtacttactgttttgcaaaccaaac 22318589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 7555081 - 7555168
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| ||||||| ||||||||||  |||| | ||||||||||||  ||||| || ||||| |||||||||||||||||||||    
T  7555081 ttgtcgtgtgatgttctgtcttgtgttgtgttgttttgtcttgtactgttaagtccaatacttactattttgcaaaccaaacacaccc 7555168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 37695665 - 37695752
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||| |||||| ||||  |||||| |||||||||||||||| ||||| ||  |||||||||||| |||| |||||    
T  37695665 ttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttctgtacagtacttgttgttttgcaaactaaacgcaccc 37695752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 54542951 - 54542865
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||| ||||||||| |||||||||| |||||| ||||||  |||| ||||||||||| ||| |||| ||||||    
T  54542951 ttgtcttgtgctgttctgctttgtgttgtactgttctatcctgtactattctgt-tagtacttactgttttgtaaatcaaagacaccc 54542865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 3649592 - 3649511
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||| ||||||||||||| |||||||   || ||||||  ||||||||| ||||| ||||||||||||||| |||||    
T  3649592 tgtgctgttatgccttgtgttgtgctgttctgcattatactgtgttgtccagtacttactattttgcaaaccaaacgcaccc 3649511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 7001816 - 7001748
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgtt 156  Q
    |||||||||  ||||||| ||||||||||  |||||| ||||||||| || ||||||||||||||||||    
T  7001816 ttgtcctgtattgttctgtcttgtgttgtgatgttctgtcttgtactattttgtccagtatttactgtt 7001748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 33552992 - 33553036
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  33552992 ttgtactgttctgtccagtacttgctgttttgcaaaccaaacaca 33553036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 47642618 - 47642702
Alignment:
Q  91 tcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||| |||||| ||||  |||||| |||||||||||||||| |  || ||  ||||||||||||||||| |||||    
T  47642618 tcctgtgctgttctcccttgtattgtgttgttctttcttgtactgttctgtactatacttgttgttttgcaaaccaaacgcaccc 47642702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 41711794 - 41711747
Alignment:
Q  126 tcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  41711794 tcttgtactgttctgtccattatttactattttgcaaatcaaacacac 41711747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 44649286 - 44649373
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||| |||||| |||| ||||||| |||||||||||||||| | ||| || | |||||||||| ||||| |||||    
T  44649286 ttgtcatgtgttgttctcccttgtattgtactgttctttcttgtactgttctgtactgtacttgccgttttgcaaatcaaacgcaccc 44649373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 2725288 - 2725329
Alignment:
Q  134 tgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  2725288 tgttctgtccagtacttgctgttttgcaaaccaaacacaccc 2725329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 38520495 - 38520438
Alignment:
Q  118 ctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||| |||||||||||||| || |   |||||||||||||||||||||||    
T  38520495 ctgttctatcttatactgttctgtccaatactagttgttttgcaaaccaaacacaccc 38520438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 13110259 - 13110207
Alignment:
Q  119 tgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    |||||||||||||| |||| | |||| || |||||||||||||||||||||||    
T  13110259 tgttctatcttgtattgttttatccactacttactgttttgcaaaccaaacac 13110207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 50728048 - 50728088
Alignment:
Q  133 ctgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  50728048 ctgttctgtccagtacttattgttttgcaaaccaaacacac 50728088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 50736062 - 50736102
Alignment:
Q  133 ctgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  50736062 ctgttctgtccagtacttattgttttgcaaaccaaacacac 50736102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 29616106 - 29616059
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||| |||| || || |||||||||||||||||||||    
T  29616106 ttgtactgttctgtcaagtacttgctattttgcaaaccaaacacaccc 29616059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 32081094 - 32081047
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||| |||| || ||| |||||||||||||||||||||||    
T  32081094 ttgtactgttctatccaataattattgttttgcaaaccaaacacaccc 32081047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 36497153 - 36497106
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| ||||||||| || |||||||||||||||||| |||||    
T  36497153 ttgtactgttatgtccagtacttgctgttttgcaaaccaaacgcaccc 36497106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 38812470 - 38812416
Alignment:
Q  119 tgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||| || ||||||||| ||||| ||| || ||||||||||||||||||||||    
T  38812470 tgttctgtcgtgtactgttttgtccggtacttgctgttttgcaaaccaaacacac 38812416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 48532342 - 48532404
Alignment:
Q  183 tttgatttgttaaaaaataaaggactggacacgacaaaaatatttgtactccgtttgatttat 245  Q
    |||| ||||||||||  ||| |||||||||| |||||||||||||| ||  ||||||||||||    
T  48532342 tttgttttgttaaaatttaagggactggacaggacaaaaatatttgcaccgcgtttgatttat 48532404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 23327847 - 23327806
Alignment:
Q  134 tgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||| ||||| ||| |||||||||||||||||||||||||||    
T  23327847 tgttttgtccggtacttactgttttgcaaaccaaacacaccc 23327806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 47669228 - 47669297
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttt 157  Q
    ||||| || |||||| |||||| ||||||  ||||| |||||||| ||||||||||| || |||||||||    
T  47669228 ttgtcgtgcgctgttttgccttatgttgtattgttccatcttgtattgttctgtccaatacttactgttt 47669297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 47361534 - 47361570
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttct 124  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  47361534 ttgtcatgtgctgttctgccttgtgttgtactgttct 47361570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 47361559 - 47361603
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||||||||||||||| || ||| ||||||| ||||||||||||    
T  47361559 ttgtactgttctgtccaatacttattgttttgtaaaccaaacaca 47361603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 52949599 - 52949519
Alignment:
Q  95 gtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||| |||| ||||||| ||||||||  ||||||   ||| || |||||||||||||||||| |||||    
T  52949599 gtgctattctcccttgtattgtgctgttctttcttgtaccattctgtattgtacttgctgttttgcaaaccaaacgcaccc 52949519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 4e-33; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 34338768 - 34338680
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacccc 176  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  34338768 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaaccaaacacacccc 34338680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 5278966 - 5279053
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  5278966 ttgtcctgtgctgttctgccttgtgttgtattgttctatcttgtactgttctgtcaagtacttactgttttgcaaaccaaacacaccc 5279053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 18685794 - 18685707
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  18685794 ttgtcctgtgctgttctgtcttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 18685707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 32497873 - 32497786
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  32497873 ttgtcctgtgctgttctgccttttgttgtactgttctatcttgtattgttctgtccagtacttactgttttgcaaaccaaacacaccc 32497786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 35114743 - 35114656
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  35114743 ttgtcctgtgccgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 35114656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 30326463 - 30326550
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  30326463 ttgtcctgtgctgttctgccttgtgttgtacggttctatcttgtactgttctgtccagtacttgctcttttgcaaaccaaacacaccc 30326550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 33366568 - 33366481
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  33366568 ttgtcctgtgctgttctgacttgtgttgtactgttctatcttgtattgttctgtccagtacttgctgttttgcaaaccaaacacaccc 33366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 40692263 - 40692176
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  40692263 ttgtcctgtgctgttttgccttgtgttgtactgttctatcttgtactgttatgtctagtatttactgttttgcaaatcaaacacaccc 40692176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 39461272 - 39461187
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  39461272 ttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtattgttatgtccagtacttactgttttgcaaaccaaacacac 39461187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 2086030 - 2085946
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  2086030 ttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacaca 2085946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 37308614 - 37308527
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  37308614 ttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaaccaaacacaccc 37308527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 17540671 - 17540588
Alignment:
Q  89 tgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| || |||||||||||||||||||||    
T  17540671 tgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctatccagtacttgctgttttgcaaaccaaacaca 17540588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 42706316 - 42706231
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||| |||| |||  |||||||||||||||||||||||||    
T  42706316 ttgtcctgtgctgttctgtcttgtgttgtattgttctatcttgtactgttatgtcaagtgcttactgttttgcaaaccaaacacac 42706231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 9733062 - 9733138
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaac 164  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||||||||    
T  9733062 ttgtcctgtgccgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgctgttttgcaaac 9733138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 4641474 - 4641387
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| ||||||||||| |||||| ||||||||| || ||||||||||||||||| || |||||||||||| |||||||||||    
T  4641474 ttgtcctgtgttgttctgccttatgttgtactgttctatattttactgttctgtccagtacttgctgttttgcaaagcaaacacaccc 4641387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 16104228 - 16104145
Alignment:
Q  92 cctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||| ||  |||||||||||||||| ||||||    
T  16104228 cctgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtccagtacttgttgttttgcaaaccaaatacaccc 16104145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 19513821 - 19513906
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||| ||||||||||| ||| | |||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  19513821 ttgtcccgtgctgttctgtcttctattgtactgttctatcttgtactgttttatccagtacttactgttttgcaaaccaaacacac 19513906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 9717177 - 9717113
Alignment:
Q  110 gtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  9717177 gtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacacc 9717113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 2645218 - 2645305
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||| ||||||||||||||| |||||| |||||||||||| ||||||||| || |||| ||  |||||||||||||||||||||||    
T  2645218 ttgtccagtgctgttctgccttatgttgtactgttctatcttatactgttctatcaagtacttgttgttttgcaaaccaaacacaccc 2645305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 26418881 - 26418794
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||||||||| ||||| ||||||| ||||| ||||||||||| | || |||||||||||||||||||||||||||    
T  26418881 ttgtcatgtgttgttctgccttgcgttgtgctgttctgtcttgcactgttctgtcaaatacttactgttttgcaaaccaaacacaccc 26418794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 37004007 - 37004088
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||| | |||||| |||| |||||||||||| |||||||||||| |||| || ||||||||||||||||||||||||    
T  37004007 tgtgctgttttaccttgtattgtactgttctatcttatactgttctgtctagtacttgctgttttgcaaaccaaacacaccc 37004088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 38993199 - 38993284
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||| |||| ||||||||||| |||||| |||| ||||||| || |||||||||||||| ||||| |||||||||||||||||||    
T  38993199 ttgtcttgtgttgttctgccttatgttgtgctgtcctatcttatattgttctgtccagtacttactattttgcaaaccaaacacac 38993284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 3913602 - 3913678
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||  |||||| |||| ||||||||| || |||||||||||||||||||| |||||||||||    
T  3913602 tgttctgccttgtgttgtgttgttctgtcttatactgttctatcaagtatttactgttttgcaaatcaaacacaccc 3913678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 12672596 - 12672671
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||| |||||||||||| || | || |||| ||||||||||||||||||||||||||||||||    
T  12672596 tgttctgccttgtgttgtactgttctatcttatatt-ttatgtctagtatttactgttttgcaaaccaaacacaccc 12672671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 26981825 - 26981904
Alignment:
Q  91 tcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    |||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| ||| ||  |||||||||||||||    
T  26981825 tcctgtgctgttctgccttgtgttgtgctgttttgtcttgtactgttctgtccagtacttattg-cttgcaaaccaaacac 26981904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 44284564 - 44284508
Alignment:
Q  119 tgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  44284564 tgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 44284508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 13829397 - 13829310
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||| ||||| |||||||||||||||||| |||||||   |||||||||| |||||| || ||||||||||||||||||||| |||||    
T  13829397 ttgttctgtgatgttctgccttgtgttgtgctgttctgctttgtactgttttgtccaataattactgttttgcaaaccaaacgcaccc 13829310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 30798621 - 30798703
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||| |||||||||||| ||| ||||   |||||||||||| ||||||||||||||||| || |||||||||||||||||||||    
T  30798621 ttgtcatgtgctgttctgtcttatgtta--ctgttctatcttatactgttctgtccagtacttgctgttttgcaaaccaaacaca 30798703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 40832602 - 40832692
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatt---tactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||| ||||||||||| ||||||||||||||||| ||||||| | || |   ||||||||||||||||||||||||||    
T  40832602 ttgtcatgtgttgttctaccttgtgttgtgctgttctatcttgtactattctgtctaatacttactactgttttgcaaaccaaacacaccc 40832692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 7258854 - 7258795
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagta 147  Q
    ||||| ||| || |||||||||||||||| ||||||||||||||||||||||||||||||    
T  7258854 ttgtcatgtactattctgccttgtgttgtactgttctatcttgtactgttctgtccagta 7258795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 28824699 - 28824773
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||| ||| |||||| ||||||| ||||||||||||| |||||||| |||||||||||| |||||||||||||    
T  28824699 tgttctgtcttatgttgtgctgttctgtcttgtactgttcagtccagtacttactgttttgc-aaccaaacacacc 28824773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 33889176 - 33889129
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  33889176 ttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 33889129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 18793393 - 18793478
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||| |||| |||||| |||| |||||| ||||||||| || ||||||| ||||||||| ||| | |||||||||||||||||||    
T  18793393 ttgtcttgtgatgttctaccttatgttgtactgttctattttatactgttttgtccagtacttattattttgcaaaccaaacacac 18793478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 16178012 - 16178099
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| ||||||  ||||||||||  || | | ||||| |||||||||||||||| ||||||||||||||||||| |||||||    
T  16178012 ttgtcgtgtgttgttctatcttgtgttgtgttgatatgtcttgcactgttctgtccagtacttactgttttgcaaaccaatcacaccc 16178099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 42365529 - 42365454
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    |||| |||||||||||||||||| |||||||||||| |  |||| | |||| || |||||||||||||||||||||    
T  42365529 tgtgttgttctgccttgtgttgtactgttctatcttatgttgttttttccaatacttactgttttgcaaaccaaac 42365454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 33305515 - 33305564
Alignment:
Q  196 aaaataaaggactggacacgacaaaaatatttgtactccgtttgatttat 245  Q
    ||||||||||| |||||| |||||||||||||||||| ||||||||||||    
T  33305515 aaaataaaggattggacatgacaaaaatatttgtactacgtttgatttat 33305564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 30712816 - 30712732
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||||| ||||||| |||  ||||||||  ||||||   |||||||||||||||||||| ||||| |||| |||||||||||||    
T  30712816 ttgtcctttgctgttatgcgctgtgttgtgttgttctgcattgtactgttctgtccagtacttacttttttacaaaccaaacaca 30712732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 27462931 - 27463014
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    ||||| |||| |||||| ||||||||||| ||||||| | ||| |||||| | |||| || || ||||||||||||||||||||    
T  27462931 ttgtcatgtgttgttctaccttgtgttgtgctgttctgttttgcactgttttatccaatacttgctgttttgcaaaccaaacac 27463014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 10400011 - 10400083
Alignment:
Q  103 ctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||| ||||||  |||| | ||||||||| || ||| ||||| | |||||||||||||||||||||||||    
T  10400011 ctgccttatgttgtgatgttttgtcttgtactattgtgttcagtactcactgttttgcaaaccaaacacaccc 10400083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 6896127 - 6896041
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||| |||||||||||||  ||||||   || |||||||||||  |||| ||||||||||||||||||||| |||||    
T  6896127 ttgtcatgtgttgttatgccttgtgttgtgttgttctgcattatactgttctgtt-agtacttactgttttgcaaaccaaacgcaccc 6896041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 11114820 - 11114749
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaaca 170  Q
    ||||||| ||||||||||  |||||| ||||||||  || |||  |||| ||||||||||||||||||||||    
T  11114820 tgttctgtcttgtgttgtgttgttctgtcttgtacaattatgtttagtacttactgttttgcaaaccaaaca 11114749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 39534181 - 39534244
Alignment:
Q  280 aagacaggacaactatccgcttttttgtccatg-cattagttggggacaactttttgtccaacg 342  Q
    ||||| |||||| || |||||||||||||||   | ||||||||||||||||||||||||||||    
T  39534181 aagacgggacaagtagccgcttttttgtccaccactttagttggggacaactttttgtccaacg 39534244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 8112244 - 8112183
Alignment:
Q  108 ttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    |||||||||  ||||||||||| || ||||| ||| |||| ||||||||||||||| |||||    
T  8112244 ttgtgttgtattgttctatcttatattgttccgtcgagtacttactgttttgcaaatcaaac 8112183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 23535 - 23448
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23535 ttgtccagtgctgttctgccttgtgttgtattgttctatcttgtactgttctgtccagtatttgctgttttgcaaaccaaacacaccc 23448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 7523129 - 7523042
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  7523129 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttcctgttttgcaaaccaaacacaccc 7523042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 2351635 - 2351552
Alignment:
Q  91 tcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  2351635 tcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacacc 2351552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 20119729 - 20119642
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  20119729 ttgtcatgtactgttctgccttgtgttgtgctgttctatcttgtactgttctgtccaatacttactgttttgcaaaccaaacacaccc 20119642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 35701235 - 35701148
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  35701235 ttgtcctgtgttattctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 35701148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 8136797 - 8136710
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||    
T  8136797 ttgtcctgtgttgttatgccttgtgttgtactgttctatcttgtactattctgtccagtacttactgttttacaaaccaaacacaccc 8136710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 32528673 - 32528586
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  32528673 ttgtcatgtgctgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttactattttgcaaatcaaacacaccc 32528586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 4818278 - 4818364
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||| |||| |||||||||||||||||  |||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  4818278 ttgtcttgtgttgttctgccttgtgttgcactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacacc 4818364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 548295 - 548219
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  548295 tgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttaatgttttgcaaaccaaacacaccc 548219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 39918465 - 39918379
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  39918465 ttgtcctgtgttgttctaccttgtgttgtactgttctatcttgtactgttctgtccagtacttactg-attgcaaaccaaacacaccc 39918379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 41790600 - 41790687
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||| |||||||||||||||    
T  41790600 ttgtcatgtgttgttctgccttgtgttgtactgttctattttatactgttctgtccagtacttactgttttgtaaaccaaacacaccc 41790687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 34794839 - 34794765
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaa 168  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  34794839 tgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttactgttttgcaaaccaaa 34794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 11963299 - 11963216
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    ||||| |||| | |||||| ||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  11963299 ttgtcatgtgttattctgctttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacac 11963216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 40182422 - 40182335
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||| ||||||||||||| ||||||| ||||||| |||||||||||||| || |||||||| |||||||||||||||    
T  40182422 ttgtcatgtgctgttttgccttgtgttgtactgttctttcttgtattgttctgtccagtacttgctgttttggaaaccaaacacaccc 40182335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 5673102 - 5673018
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||||| || |||| ||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  5673102 ttgtcctttgatgttatgccttgtgttgtgctgttatatcttgtactgttctgtcaagtacttactgttttgtaaaccaaacaca 5673018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 6284437 - 6284524
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||||||| |||||||||||||| |||||||||||| || |||||||||||||| || |||||||| ||| |||||||||||    
T  6284437 ttgtcttgtgctgtactgccttgtgttgtactgttctatcttatattgttctgtccagtacttgctgttttgtaaatcaaacacaccc 6284524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 37148711 - 37148797
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||||||||||| | ||||||||||| ||||||| | || ||||||| ||||||||| ||||||||||||||||||||| ||||    
T  37148711 ttgtcctgtgctgttataccttgtgttgtgctgttctgtattatactgttttgtccagtacttactgttttgcaaaccaaacgcacc 37148797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 21739304 - 21739381
Alignment:
Q  98 ctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||| |||||||||| |||||||||||| || |||| ||||||||| || ||||||||||||||||||||||||    
T  21739304 ctgttctgtcttgtgttgtactgttctatcttatattgttatgtccagtacttgctgttttgcaaaccaaacacaccc 21739381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 24036191 - 24036105
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||| |||| ||||||| ||| |||||| ||||||| ||||||||||||| || ||||| ||| ||||||||||||||||||||||    
T  24036191 ttgtcatgtgttgttctgtcttatgttgtgctgttctgtcttgtactgttcagtacagtacttattgttttgcaaaccaaacacacc 24036105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 31770729 - 31770782
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgt 141  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  31770729 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttatactgttctgt 31770782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 4689835 - 4689922
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| ||||||||||| ||||||  |||||| |||||||||||| |||||| || || |||||||||||||||||| |||||    
T  4689835 ttgtcatgtgttgttctgccttatgttgtgttgttctgtcttgtactgttatgtccattacttgctgttttgcaaaccaaacgcaccc 4689922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 24181787 - 24181834
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  24181787 ttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 24181834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 3735316 - 3735230
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||||| ||||||||| |||||| |||| || |||| |||||||||||||||| |||||  | |||||||||||||||||| ||||    
T  3735316 ttgtcctatgctgttctcccttgtattgtgctattctttcttgtactgttctgtacagtacctgctgttttgcaaaccaaacgcacc 3735230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 7770416 - 7770497
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    |||||||||||| ||||| ||||||||||  |||||| ||||||||  || ||||||||| || ||||||||||||||||||    
T  7770416 ttgtcctgtgctattctgtcttgtgttgtgttgttctgtcttgtacgattatgtccagtacttgctgttttgcaaaccaaac 7770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 22493556 - 22493644
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacccc 176  Q
    |||| |||||||||||| |||||||||||  | |||| ||||| ||||||||||||| || ||  |||||||| |||||||||||||||    
T  22493556 ttgttctgtgctgttctaccttgtgttgtgttattctgtcttgcactgttctgtccaatacttgttgttttgcgaaccaaacacacccc 22493644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 7725946 - 7726033
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||| | || |||| |||||||||||  ||| || |||||||||||| |||| |||| ||||||||||||||| |||||||||||    
T  7725946 ttgtcctatactattctaccttgtgttgtgatgtactgtcttgtactgttatgtctagtacttactgttttgcaaatcaaacacaccc 7726033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 31880239 - 31880286
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  31880239 ttgtactgttctgtccagtacttactgttttgcaaatcaaacacaccc 31880286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 27839213 - 27839294
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||| ||||| ||| ||||||  || |||||||||||  |||||||||||||||| ||||||| |||||||||| |||||    
T  27839213 tgtgctattctgtcttatgttgtgttgctctatcttgtatcgttctgtccagtattttctgtttttcaaaccaaacgcaccc 27839294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 23091467 - 23091515
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacacccc 176  Q
    |||||||||||||| || || ||||||||||||||||||||||||||||    
T  23091467 ttgtactgttctgttcattacttactgttttgcaaaccaaacacacccc 23091515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 7208393 - 7208440
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||    
T  7208393 ttgtactgttctgtccagtacttgttgttttgcaaaccaaacacaccc 7208440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 18470565 - 18470652
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||| |||||||||| || ||||| |||| |||||||   || |||||| |||||||||| ||||| ||||||||||||||| |||||    
T  18470565 ttgttctgtgctgttatgtcttgtattgtgctgttctgcattatactgtgctgtccagtacttactattttgcaaaccaaacgcaccc 18470652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 29241311 - 29241264
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||    
T  29241311 ttgtactgttctgtccagtacttgctgttttgcaaaccaagcacaccc 29241264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 32093124 - 32093203
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||| |  |||||| |||  ||||||||||||||||| ||||  ||||||||| ||||| |||||    
T  32093124 tgtgctgttctgccttgtgttatgttgttctgtctcttactgttctgtccagtacttac--ttttgcaaatcaaacgcaccc 32093203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 39788125 - 39788079
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    |||||||||||||| ||||||||||||||| | ||||||||||||||    
T  39788125 ttgtactgttctgtgcagtatttactgtttcgtaaaccaaacacacc 39788079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 29241336 - 29241300
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttct 124  Q
    ||||||||||||||||||||||||||||| |||||||    
T  29241336 ttgtcctgtgctgttctgccttgtgttgtactgttct 29241300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 700739 - 700801
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtattt 150  Q
    ||||| ||||||||||| |||||||||||  | || | |||||||||||| ||||||||||||    
T  700739 ttgtcatgtgctgttctaccttgtgttgtattattttgtcttgtactgttatgtccagtattt 700801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 41459547 - 41459511
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttct 124  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  41459547 ttgtcctgtgctgttctaccttgtgttgtactgttct 41459511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 28675749 - 28675662
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  28675749 ttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttattgttttgcaaaccaaacacaccc 28675662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 51259906 - 51259993
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  51259906 ttgtcttgtgctgttctgccttgtgttgtactgttctatcttgtactgttctatccagtacttactgttttgcaaaccaaacacaccc 51259993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 26282513 - 26282599
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||| |||||||||||| |||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  26282513 ttgtcatgtgctgttctgtcttgtgttgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaaacacacc 26282599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 29584834 - 29584749
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||| |||| |||||||||||| |||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  29584834 ttgttctgtactgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 29584749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 4851582 - 4851669
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||||| ||||| ||| || ||||||||||||||||||||||||    
T  4851582 ttgtcctgtcttgttctgccttgtgttgtactgttctatcttgtactgttttgtccggtacttgctgttttgcaaaccaaacacaccc 4851669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 53557921 - 53558008
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| ||||| || |||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  53557921 ttgtcatgtgctgttctgccttgtgttgtactgttataccttgtattgttctgtcaagtacttactgttttgcaaaccaaacacaccc 53558008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 25860547 - 25860632
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||||||| |||| |||||| |||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  25860547 ttgtcctgtgttgttatgccttttgttgtgctgttctatcttgtactgttctgtccagtgcttaccgttttgcaaaccaaacacac 25860632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 21221486 - 21221570
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| |||| || |||| ||||||||||||||||    
T  21221486 ttgtcttgtgctgttctgccttatgttgtactgttctatcttgtactgttctgtctagtacttgctgtattgcaaaccaaacaca 21221570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 1344833 - 1344920
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| ||||||| |||||||||| |||||||||||||||||||| ||||||||| || || |||||||||||||||||||||    
T  1344833 ttgtcatgtgatgttctgtcttgtgttgtactgttctatcttgtactgttttgtccagtacttgctattttgcaaaccaaacacaccc 1344920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 3864800 - 3864883
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    ||||||||||||||| ||| || ||||||  ||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  3864800 ttgtcctgtgctgttatgcgttatgttgtaatgttctatcttgtactgttctgtgcagtacttactgttttgcaaaccaaacac 3864883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 39052965 - 39053052
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| ||||||  |||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  39052965 ttgtcatgtgttgttctatcttgtgttgtactgttctatcttgtactgttctgttcagcatttactattttgcaaaccaaacacaccc 39053052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 2135029 - 2134944
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||  |||||||| |||| || ||||||||||||||||||||||    
T  2135029 ttgtcttgtgttgttctgccttgtgttgtactgttctatcttgtaacgttctgtctagtacttgctgttttgcaaaccaaacacac 2134944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 43175522 - 43175441
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||| ||||| || | |||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  43175522 tgtgctgttctgtcttgtattatactgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacacaccc 43175441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 47958566 - 47958643
Alignment:
Q  96 tgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  47958566 tgctgttctgccttgtattgtagtgttctatcttgtattgttctgtccagtacttgctgttttgcaaaccaaacacac 47958643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 12349297 - 12349376
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaa 167  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| || || || |||||||||||||    
T  12349297 ttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttatgtccaatacttgctcttttgcaaaccaa 12349376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 51925333 - 51925420
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| ||||| | |||||||||||| | ||||||| |||| |||||||||||||||| |||||    
T  51925333 ttgtcatgtgctgttctgccttgtgttgtgctgttatgtcttgtactgttatatccagtacttaccgttttgcaaaccaaacgcaccc 51925420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 53046767 - 53046850
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||| |||||||| ||||| ||  |||||||||||||||||||    
T  53046767 ttgttctgtgttgttctgccttgtgttgtactgttctatcttgtattgttctgttcagtacttgttgttttgcaaaccaaacac 53046850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 22484868 - 22484954
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||| ||||||||||| |||| ||||||  ||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  22484868 ttgtcttgtgctgttctaccttatgttgtgttgtcctatcttatactgttatgtccagtacttactgttttgcaaaccaaacacacc 22484954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 21373880 - 21373811
Alignment:
Q  107 cttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacccc 176  Q
    |||||||||| ||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||||    
T  21373880 cttgtgttgtgctgttctgtcttgtattgttctgtccaatacttactgttttgcaaaccaaacacacccc 21373811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 31883147 - 31883234
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| |||||| |||||| |||| ||||||| |||||||||||||||| | ||| || || |||||||||||||||||||||    
T  31883147 ttgtcctgtgttgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctattttgcaaaccaaacacaccc 31883234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 50386581 - 50386661
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaa 168  Q
    ||||||||||||||||| |||||| |||| ||||||| | |||||||||||||| | ||| || |||||||||||||||||    
T  50386581 ttgtcctgtgctgttctcccttgtattgtgctgttcttttttgtactgttctgtactgtacttgctgttttgcaaaccaaa 50386661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 5442250 - 5442163
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| |||| |||| | |||||| |||| ||||||||  |||||||||||||||||||| || || |||||||||||||||||||||    
T  5442250 ttgtcatgtgttgttataccttgtattgtactgttctaaattgtactgttctgtccagtacttgctattttgcaaaccaaacacaccc 5442163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 20609799 - 20609846
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  20609799 ttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 20609846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 24571240 - 24571154
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||| |||||||||||| ||||||  ||||||||||| || ||| |||||||||| |||||||||| ||||||||||||||||    
T  24571240 ttgtcatgtactgttctgccttatgttgtattgttctatcttatagtgt-ctgtccagtacttactgttttacaaaccaaacacaccc 24571154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 34026601 - 34026554
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  34026601 ttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 34026554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 38213313 - 38213227
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||| |||||||||||||||  |||| |  |||| | |||||||||||||||| || || ||||||||||||||||||||||||||    
T  38213313 ttgtcatgtgctgttctgcctaatgttatgttgttttgtcttgtactgttctgtacaatacttactgttttgcaaaccaaacacacc 38213227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 3695438 - 3695485
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||    
T  3695438 ttgtactgttctgtccagtacttacatttttgcaaaccaaacacaccc 3695485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 10747177 - 10747090
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||| |||||| ||||  |||||| |||||||||||| | | | ||| || |||||||||||||||||| |||||    
T  10747177 ttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttttatactgtacttgctgttttgcaaaccaaacgcaccc 10747090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 20254994 - 20254947
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||    
T  20254994 ttgtactgttatgtccagtacttgctgttttgcaaaccaaacacaccc 20254947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 25927453 - 25927536
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactg-ttttgcaaaccaaaca 170  Q
    ||||| ||||||||||| |||||| |||| |||||||||||| ||||||| ||||| ||| ||  || ||||||||||||||||    
T  25927453 ttgtcttgtgctgttctaccttgtattgtactgttctatcttatactgttttgtccggtacttgttgtttttgcaaaccaaaca 25927536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 40094462 - 40094411
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttct 139  Q
    ||||| |||| ||||||||||||||||||  |||||||||||||||||||||    
T  40094462 ttgtcatgtgttgttctgccttgtgttgtattgttctatcttgtactgttct 40094411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 3964248 - 3964167
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    ||||| |||||||||||||||||| ||||  |||  | |||||| ||||||| || |||| ||||||||||||||| |||||    
T  3964248 ttgtcttgtgctgttctgccttgtattgtgttgtgttgtcttgtgctgttctatcaagtacttactgttttgcaaatcaaac 3964167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 44116873 - 44116829
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    |||||||||||| ||||||| || |||||||||||||||||||||    
T  44116873 ttgtactgttctatccagtacttgctgttttgcaaaccaaacaca 44116829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 45691056 - 45691112
Alignment:
Q  119 tgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||| |||||||||||||| ||||||| ||| ||||||| ||| |||||||||||    
T  45691056 tgttctgtcttgtactgttctatccagtacttagtgttttgtaaatcaaacacaccc 45691112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 52300430 - 52300359
Alignment:
Q  97 gctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaac 169  Q
    |||||||| |||| |||||| |||||||   ||||||||||||||||| || ||| |||||||||||||||||    
T  52300430 gctgttctaccttttgttgtgctgttctgctttgtactgttctgtccaataatta-tgttttgcaaaccaaac 52300359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 54622929 - 54623001
Alignment:
Q  99 tgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    |||||||||||||||| |  |||| |||||||||   ||||||| ||||||||||| ||| ||||||||||||    
T  54622929 tgttctgccttgtgttctgttgttttatcttgtaggattctgtcaagtatttactgattttcaaaccaaacac 54623001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 33364903 - 33364990
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||| | ||||||  ||||| |||| || |||| |||||||||||| ||| | ||| || |||||||||||||||||| |||||    
T  33364903 ttgtcctgggttgttctctcttgtattgtgctattctttcttgtactgttttgtactgtacttgctgttttgcaaaccaaacgcaccc 33364990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 44116898 - 44116859
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatc 127  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  44116898 ttgtcctgtgctgttctgacttgtgttgtactgttctatc 44116859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 42636529 - 42636575
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtact 134  Q
    ||||||||||||||||||||||||||||| || |||| ||| |||||    
T  42636529 ttgtcctgtgctgttctgccttgtgttgtactattctgtctagtact 42636575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 3867809 - 3867849
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaa 168  Q
    |||||||||| ||| ||||| ||||||||||||||||||||    
T  3867809 ttgtactgttatgttcagtacttactgttttgcaaaccaaa 3867849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 116
Target Start/End: Complemental strand, 34026626 - 34026598
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgt 116  Q
    |||||||||||||||||||||||||||||    
T  34026626 ttgtcctgtgctgttctgccttgtgttgt 34026598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 54964042 - 54964094
Alignment:
Q  123 ctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||| ||||||| |||||||||  |||| |||||||||||||||| ||||    
T  54964042 ctatcttatactgttatgtccagtacgtactattttgcaaaccaaacataccc 54964094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 2476 - 2563
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  2476 ttgtcatgtgctgttctgccttgtgttgtactattctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 2563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 4717 - 4796
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacac 173  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||      ||||||||||||||||||||||    
T  4717 ttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccag------ctgttttgcaaaccaaacacac 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 12674 - 12760
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||| |||||||||||| | |||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  12674 ttgtcttgtgctgttctgacatgtgttgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaaacacacc 12760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 18192 - 18278
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||| |||||||||||| | |||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  18192 ttgtcttgtgctgttctgacatgtgttgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaaacacacc 18278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 5577 - 5663
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||| ||||||||| || |||||||||||||||||| ||||    
T  5577 ttgtcctgtgctgttctgccttgtgttgtgttgttctgtcttgtactgttatgtccagtacttgctgttttgcaaaccaaacgcacc 5663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 101907 - 101820
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||| |||| | |||| |||||||||||| ||||||||||||| ||| || ||||||||||||||||||||||||    
T  101907 ttgtcctgtgctgttctaccttatattgtactgttctatcttatactgttctgtccggtacttgctgttttgcaaaccaaacacaccc 101820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 51397 - 51311
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacacc 174  Q
    ||||| |||||||||||| ||||| || | ||||||||| |||||||||||||||||||| || |||||||||||||||||||||||    
T  51397 ttgtcttgtgctgttctgtcttgtattatactgttctatattgtactgttctgtccagtacttgctgttttgcaaaccaaacacacc 51311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 15124 - 15047
Alignment:
Q  94 tgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacac 171  Q
    |||| ||||||||||| |||||| ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  15124 tgtgttgttctgccttatgttgtactgttctattttgtactgttctgtccggtacttactgttttgcaaaccaaacac 15047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 15540 - 15587
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||    
T  15540 ttgtactgttctgtccagtacttactgttttacaaaccaaacacaccc 15587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 124
Target Start/End: Original strand, 15518 - 15551
Alignment:
Q  91 tcctgtgctgttctgccttgtgttgtcctgttct 124  Q
    |||||||||||||||||||||||||| |||||||    
T  15518 tcctgtgctgttctgccttgtgttgtactgttct 15551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 43102 - 43173
Alignment:
Q  104 tgccttgtgttgtcctgttctatcttgtactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    |||||||| |||| |||||||   |||||||| |||||| |||| ||||||||||||||||||||| |||||    
T  43102 tgccttgtattgtgctgttctgcattgtactgctctgtctagtacttactgttttgcaaaccaaacgcaccc 43173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 13867 - 13911
Alignment:
Q  131 tactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||| ||||||||||||||| ||||| |||||    
T  13867 tactgttctgtccagtacttactgttttgcaaatcaaacgcaccc 13911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 373127 - 373171
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    |||||||||||||| ||||| || |||||||||||||||||||||    
T  373127 ttgtactgttctgttcagtacttgctgttttgcaaaccaaacaca 373171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 338802 - 338758
Alignment:
Q  131 tactgttctgtccagtatttactgttttgcaaaccaaacacaccc 175  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||    
T  338802 tactgttatgtccagtacttgctgttttgcaaaccaaacacaccc 338758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 2633 - 2692
Alignment:
Q  88 ttgtcctgtgctgttctgccttgtgttgtcctgttctatcttgtactgttctgtccagta 147  Q
    ||||| |||| |||||| |||||||||||  ||||||||||| ||||||| |||||||||    
T  2633 ttgtcatgtgttgttctaccttgtgttgtattgttctatcttatactgttatgtccagta 2692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 751 - 687
Alignment:
Q  181 catttgatttgttaaaaaataaaggactggacacgacaaaaatatttgtactccgtttgatttat 245  Q
    |||||| ||||||||||  ||| ||| |||| | |||||||||||||||||  ||||||||||||    
T  751 catttgttttgttaaaatttaagggagtggataggacaaaaatatttgtaccgcgtttgatttat 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 19253 - 19297
Alignment:
Q  128 ttgtactgttctgtccagtatttactgttttgcaaaccaaacaca 172  Q
    |||||||||| || |||||| |||||||||| |||||||||||||    
T  19253 ttgtactgttatgcccagtacttactgttttacaaaccaaacaca 19297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University