View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18271_low_12 (Length: 299)
Name: NF18271_low_12
Description: NF18271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18271_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 62 - 284
Target Start/End: Original strand, 33186142 - 33186364
Alignment:
| Q |
62 |
gttttgaatgcatcttagatttttccttgtttgtacaaagattattattcaagttttatagctatagtttatagcttaggttagttcaatattcatatca |
161 |
Q |
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| T |
33186142 |
gttttgaatgcatcttagatttttccttgtttgtacaaagattattattcaagttttatagctatagtttatagcttaggttagttcaatattcatatca |
33186241 |
T |
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| Q |
162 |
atatttcccaatggttgatttagacaatgtttcaacagcttcaggtgaagctagcatctcttcctctggtaataacaatattcaatcaccaattccaaaa |
261 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33186242 |
atatttcccaatggttgatttagacaatgtttccacagcttcaggtgaagctagcatctcttcctctggtaataacaatattcaatcaccaattccaaaa |
33186341 |
T |
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| Q |
262 |
cccaccaagaaaaagagaaatct |
284 |
Q |
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||||||||||||||||||||||| |
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| T |
33186342 |
cccaccaagaaaaagagaaatct |
33186364 |
T |
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