View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18271_low_18 (Length: 255)
Name: NF18271_low_18
Description: NF18271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18271_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 46891898 - 46892030
Alignment:
| Q |
20 |
acaaaggcacttctcccccaaacccaaaaaagaggttaatggaaaaccccattggcagaatccttgaacattggctagtctaccatccaaacattctaaa |
119 |
Q |
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| T |
46891898 |
acaaaggcacttctcccccaaacccaaaaa-gaggtgaatggaaaaccccattggcagaatccttgaacattggctagtctaccatccaaacattctaaa |
46891996 |
T |
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| Q |
120 |
tttcacatggaaccctcctcacactccagcctca |
153 |
Q |
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| T |
46891997 |
tttcacatggaaccctcctcacactccagcctca |
46892030 |
T |
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