View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18271_low_19 (Length: 251)
Name: NF18271_low_19
Description: NF18271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18271_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 2829497 - 2829693
Alignment:
| Q |
12 |
aattctgctctgaagttccttttccttcttcatagatgaagttgttgaagtttccaaggcagtttcctttgactttatcaggccctgacataaacaatct |
111 |
Q |
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| T |
2829497 |
aattctgctctgaagttccttttccttcttcatagatgaagttgttgaagtttccaaggcagtttcctttgactttatcaggccctgacataaacaatct |
2829596 |
T |
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| Q |
112 |
tttatattaacataagaaggagaaaatgaaggatatatagtatatgttctgaaatattacaagagaaaacagcatccagggagcaataaattttctt |
208 |
Q |
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| T |
2829597 |
tttatattaacataagaaggagaaaatgaaggatatatagtatatgttctgaaatattacaagagaaaacagcatccagggagcaataaattttctt |
2829693 |
T |
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