View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18271_low_21 (Length: 243)
Name: NF18271_low_21
Description: NF18271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18271_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 21 - 225
Target Start/End: Complemental strand, 14752555 - 14752351
Alignment:
| Q |
21 |
atcccctcaacacagtacatgaaatcgcgaagcagatcgcggattccaaacctgtcctcgcctttacaacctcgcccctcatttccaaaatcaatgcagc |
120 |
Q |
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| T |
14752555 |
atcccctcaacacagtacatgaaatcgcgaagcagatcgcggattccaaacctgtcctcgcctttacaacctcgcccctcgtttccaaaatcaatgcagc |
14752456 |
T |
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| Q |
121 |
atctccaactcttccaattattcttatggaagccgatgggaactcgacatcatcaaacacactggaggaaatgatgaagaaagaaggtcaatcctatgat |
220 |
Q |
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| T |
14752455 |
atcgccaactcttccaattattcttatggaagccgatgggaactcgacatcatcaaacacactggaggaaatgatgaagaaagaaggtcaatcctatgat |
14752356 |
T |
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| Q |
221 |
gacac |
225 |
Q |
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||||| |
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| T |
14752355 |
gacac |
14752351 |
T |
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