View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18272_low_17 (Length: 371)

Name: NF18272_low_17
Description: NF18272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18272_low_17
NF18272_low_17
[»] chr7 (40 HSPs)
chr7 (179-353)||(4826303-4826477)
chr7 (48-184)||(7500449-7500584)
chr7 (33-187)||(22630408-22630562)
chr7 (48-180)||(7501823-7501955)
chr7 (29-180)||(3227546-3227697)
chr7 (29-180)||(127335-127484)
chr7 (29-180)||(31949320-31949471)
chr7 (37-178)||(31659622-31659764)
chr7 (36-178)||(47525326-47525468)
chr7 (29-182)||(31949754-31949907)
chr7 (37-176)||(17781663-17781802)
chr7 (48-178)||(18371424-18371554)
chr7 (29-177)||(3227109-3227256)
chr7 (48-182)||(22629479-22629616)
chr7 (48-165)||(18372428-18372544)
chr7 (47-180)||(42886256-42886389)
chr7 (85-181)||(11658376-11658472)
chr7 (47-188)||(14999125-14999263)
chr7 (35-179)||(31660968-31661111)
chr7 (50-189)||(21505405-21505542)
chr7 (48-179)||(47369780-47369911)
chr7 (103-181)||(17782579-17782657)
chr7 (102-175)||(11662576-11662649)
chr7 (39-180)||(30439320-30439460)
chr7 (139-179)||(5111441-5111481)
chr7 (47-179)||(34352756-34352888)
chr7 (29-175)||(128553-128699)
chr7 (51-110)||(14998048-14998107)
chr7 (37-94)||(6618291-6618348)
chr7 (142-179)||(9822334-9822371)
chr7 (142-179)||(10724259-10724296)
chr7 (120-180)||(21508447-21508505)
chr7 (131-180)||(32253452-32253501)
chr7 (85-150)||(34351520-34351585)
chr7 (47-115)||(48933730-48933796)
chr7 (47-107)||(770731-770791)
chr7 (131-179)||(20163610-20163658)
chr7 (104-180)||(34174010-34174085)
chr7 (48-115)||(46482660-46482727)
chr7 (102-178)||(48934928-48935004)
[»] chr1 (53 HSPs)
chr1 (179-353)||(38727891-38728065)
chr1 (30-178)||(51684366-51684514)
chr1 (34-180)||(11437156-11437302)
chr1 (35-175)||(24426033-24426173)
chr1 (37-180)||(24422798-24422941)
chr1 (37-179)||(52274967-52275109)
chr1 (48-183)||(50680327-50680461)
chr1 (37-179)||(11436041-11436183)
chr1 (37-177)||(43377721-43377861)
chr1 (37-179)||(52827346-52827488)
chr1 (47-179)||(39698562-39698693)
chr1 (29-179)||(35594216-35594364)
chr1 (29-179)||(41366083-41366232)
chr1 (34-179)||(36612852-36612996)
chr1 (46-179)||(45157178-45157310)
chr1 (47-178)||(39699737-39699867)
chr1 (37-180)||(51685725-51685868)
chr1 (46-175)||(39153085-39153214)
chr1 (35-180)||(52276121-52276266)
chr1 (47-143)||(44411936-44412032)
chr1 (49-178)||(50681580-50681705)
chr1 (48-183)||(35066973-35067108)
chr1 (47-178)||(45148581-45148711)
chr1 (29-180)||(52828022-52828173)
chr1 (48-178)||(36613875-36614005)
chr1 (46-180)||(39151929-39152063)
chr1 (29-180)||(35595144-35595296)
chr1 (29-178)||(41364829-41364977)
chr1 (46-175)||(45156052-45156181)
chr1 (48-180)||(43058784-43058915)
chr1 (48-178)||(39222444-39222575)
chr1 (37-175)||(43378673-43378810)
chr1 (47-180)||(45149940-45150073)
chr1 (47-175)||(40384727-40384856)
chr1 (47-179)||(44404441-44404573)
chr1 (34-109)||(2940334-2940409)
chr1 (48-175)||(37526849-37526975)
chr1 (29-182)||(7983046-7983198)
chr1 (29-94)||(46525753-46525817)
chr1 (36-178)||(46066525-46066664)
chr1 (47-181)||(14999282-14999412)
chr1 (75-180)||(23980464-23980569)
chr1 (48-180)||(43059977-43060109)
chr1 (29-94)||(46524623-46524687)
chr1 (47-179)||(14999925-15000057)
chr1 (29-175)||(30249442-30249588)
chr1 (69-179)||(33088609-33088719)
chr1 (102-182)||(7674524-7674602)
chr1 (51-150)||(33088095-33088194)
chr1 (131-180)||(11190383-11190432)
chr1 (37-90)||(39221402-39221455)
chr1 (132-179)||(39221357-39221405)
chr1 (142-182)||(40390821-40390861)
[»] chr4 (50 HSPs)
chr4 (37-180)||(1290158-1290301)
chr4 (29-176)||(19750527-19750673)
chr4 (29-176)||(19789133-19789279)
chr4 (34-180)||(1289095-1289241)
chr4 (29-178)||(25684934-25685083)
chr4 (36-179)||(10470545-10470688)
chr4 (37-180)||(13509319-13509461)
chr4 (48-181)||(52491578-52491711)
chr4 (48-180)||(8757673-8757804)
chr4 (36-183)||(10471347-10471494)
chr4 (47-179)||(31599788-31599920)
chr4 (47-175)||(35935503-35935631)
chr4 (29-180)||(1835054-1835205)
chr4 (49-175)||(8758809-8758935)
chr4 (36-180)||(25685781-25685925)
chr4 (47-178)||(31600955-31601086)
chr4 (40-183)||(49307991-49308132)
chr4 (29-178)||(1834119-1834269)
chr4 (36-180)||(13386012-13386158)
chr4 (46-178)||(10447006-10447139)
chr4 (29-180)||(1963194-1963345)
chr4 (48-175)||(12129626-12129753)
chr4 (29-179)||(5525359-5525508)
chr4 (29-190)||(13386484-13386646)
chr4 (46-175)||(35934347-35934474)
chr4 (36-180)||(5526085-5526228)
chr4 (46-180)||(10448229-10448363)
chr4 (37-115)||(37727759-37727837)
chr4 (37-115)||(37728525-37728603)
chr4 (29-115)||(46638677-46638763)
chr4 (29-178)||(1964393-1964542)
chr4 (48-175)||(8155741-8155867)
chr4 (96-175)||(55602379-55602457)
chr4 (51-180)||(26421597-26421724)
chr4 (47-178)||(50909642-50909774)
chr4 (60-180)||(48780246-48780366)
chr4 (102-181)||(17382990-17383068)
chr4 (102-181)||(17388236-17388314)
chr4 (38-179)||(48781007-48781147)
chr4 (40-180)||(49306773-49306911)
chr4 (40-150)||(33296251-33296361)
chr4 (102-184)||(3928883-3928965)
chr4 (37-107)||(8896871-8896940)
chr4 (103-179)||(14868889-14868964)
chr4 (103-179)||(14876970-14877045)
chr4 (29-73)||(27257920-27257964)
chr4 (48-115)||(2412890-2412957)
chr4 (142-187)||(20919596-20919641)
chr4 (48-180)||(21177995-21178126)
chr4 (86-150)||(26420343-26420406)
[»] chr2 (37 HSPs)
chr2 (47-183)||(38840463-38840599)
chr2 (40-178)||(18299373-18299511)
chr2 (47-180)||(7899852-7899985)
chr2 (35-179)||(11258769-11258913)
chr2 (29-191)||(18797233-18797396)
chr2 (47-181)||(36449775-36449909)
chr2 (46-183)||(7898686-7898823)
chr2 (47-180)||(38839240-38839373)
chr2 (48-179)||(22848190-22848321)
chr2 (53-180)||(23869511-23869637)
chr2 (37-179)||(11257621-11257762)
chr2 (49-179)||(13570529-13570659)
chr2 (51-180)||(18904365-18904494)
chr2 (48-180)||(18905959-18906090)
chr2 (46-179)||(22587923-22588055)
chr2 (48-180)||(36450892-36451023)
chr2 (47-178)||(41878092-41878225)
chr2 (29-115)||(11996770-11996856)
chr2 (46-180)||(41879181-41879315)
chr2 (40-179)||(24475224-24475362)
chr2 (37-175)||(26544152-26544289)
chr2 (29-178)||(1034422-1034570)
chr2 (46-115)||(22587563-22587632)
chr2 (48-175)||(8534586-8534711)
chr2 (48-177)||(13030293-13030419)
chr2 (48-115)||(22067753-22067820)
chr2 (40-177)||(18300688-18300822)
chr2 (49-179)||(802563-802692)
chr2 (118-180)||(11938829-11938891)
chr2 (48-109)||(1410069-1410130)
chr2 (47-115)||(32739714-32739782)
chr2 (37-104)||(27552525-27552591)
chr2 (130-180)||(16446152-16446202)
chr2 (102-180)||(18868922-18869000)
chr2 (102-175)||(13567975-13568048)
chr2 (37-94)||(26545481-26545538)
chr2 (49-137)||(1091736-1091824)
[»] chr6 (35 HSPs)
chr6 (30-180)||(6842236-6842386)
chr6 (48-183)||(7316265-7316400)
chr6 (49-180)||(16704469-16704600)
chr6 (45-175)||(5658759-5658889)
chr6 (61-183)||(10784587-10784710)
chr6 (47-180)||(14822358-14822491)
chr6 (29-182)||(27437824-27437977)
chr6 (36-180)||(8659263-8659407)
chr6 (31-179)||(8660158-8660305)
chr6 (29-181)||(34834531-34834683)
chr6 (48-178)||(7314880-7315009)
chr6 (47-180)||(26574617-26574749)
chr6 (47-175)||(1829573-1829701)
chr6 (36-179)||(3721611-3721754)
chr6 (47-189)||(14823545-14823688)
chr6 (48-165)||(10785884-10786000)
chr6 (48-180)||(17496791-17496928)
chr6 (29-98)||(26717065-26717134)
chr6 (60-180)||(8821871-8821991)
chr6 (131-183)||(27447967-27448019)
chr6 (47-150)||(26575024-26575127)
chr6 (103-180)||(3722533-3722610)
chr6 (131-176)||(26717138-26717183)
chr6 (56-179)||(3333005-3333128)
chr6 (29-79)||(3722475-3722525)
chr6 (60-178)||(8822776-8822894)
chr6 (48-115)||(3333496-3333563)
chr6 (39-94)||(22418858-22418912)
chr6 (102-181)||(27322093-27322171)
chr6 (145-179)||(20973367-20973401)
chr6 (131-173)||(29473082-29473124)
chr6 (143-180)||(22968422-22968459)
chr6 (143-180)||(23819934-23819971)
chr6 (131-180)||(27443748-27443797)
chr6 (29-177)||(12382663-12382811)
[»] chr5 (36 HSPs)
chr5 (49-180)||(25523067-25523198)
chr5 (47-184)||(33160257-33160393)
chr5 (37-180)||(16650815-16650958)
chr5 (37-178)||(22940583-22940723)
chr5 (47-180)||(28538674-28538807)
chr5 (48-180)||(18486873-18487005)
chr5 (47-179)||(36486458-36486590)
chr5 (47-175)||(28539790-28539917)
chr5 (29-181)||(42196152-42196304)
chr5 (48-188)||(19752902-19753041)
chr5 (29-175)||(42195137-42195281)
chr5 (36-180)||(5778795-5778939)
chr5 (40-175)||(2186774-2186908)
chr5 (46-175)||(24332916-24333045)
chr5 (29-181)||(25055409-25055561)
chr5 (29-182)||(18154490-18154641)
chr5 (29-178)||(25056332-25056482)
chr5 (47-176)||(36485302-36485431)
chr5 (47-181)||(40255642-40255776)
chr5 (47-115)||(1797267-1797335)
chr5 (48-179)||(18485137-18485275)
chr5 (102-178)||(20214196-20214271)
chr5 (129-180)||(20216815-20216866)
chr5 (48-181)||(19754101-19754235)
chr5 (29-149)||(5730814-5730934)
chr5 (40-124)||(16650046-16650130)
chr5 (131-180)||(5730439-5730489)
chr5 (24-94)||(36221077-36221147)
chr5 (48-175)||(2686372-2686501)
chr5 (60-180)||(5777899-5778017)
chr5 (142-180)||(38476745-38476783)
chr5 (102-182)||(25524152-25524233)
chr5 (142-179)||(31576627-31576664)
chr5 (102-178)||(1796054-1796130)
chr5 (85-189)||(7311579-7311683)
chr5 (48-124)||(25524069-25524145)
[»] chr8 (48 HSPs)
chr8 (48-181)||(10007734-10007867)
chr8 (48-183)||(10006339-10006474)
chr8 (48-183)||(18979091-18979226)
chr8 (30-180)||(8389642-8389792)
chr8 (29-179)||(22221316-22221466)
chr8 (29-179)||(22227658-22227808)
chr8 (37-179)||(30335638-30335780)
chr8 (34-178)||(11283166-11283310)
chr8 (40-175)||(40471110-40471244)
chr8 (40-178)||(30336464-30336602)
chr8 (37-179)||(43661783-43661925)
chr8 (48-173)||(1824049-1824174)
chr8 (48-173)||(1858494-1858619)
chr8 (48-169)||(18978029-18978149)
chr8 (47-180)||(24122881-24123013)
chr8 (30-190)||(2379877-2380033)
chr8 (48-181)||(5513979-5514111)
chr8 (29-178)||(22220388-22220537)
chr8 (47-179)||(12353331-12353461)
chr8 (47-175)||(29968307-29968434)
chr8 (37-176)||(43661267-43661406)
chr8 (47-179)||(12351920-12352052)
chr8 (47-169)||(18970920-18971041)
chr8 (54-179)||(32207302-32207425)
chr8 (49-189)||(1823541-1823682)
chr8 (49-189)||(1857986-1858127)
chr8 (47-180)||(24123868-24123998)
chr8 (46-178)||(36249552-36249684)
chr8 (48-115)||(34625171-34625238)
chr8 (30-180)||(11282006-11282156)
chr8 (47-179)||(45114487-45114618)
chr8 (29-115)||(24359870-24359956)
chr8 (29-98)||(2378940-2379009)
chr8 (35-179)||(8388463-8388605)
chr8 (43-158)||(40469360-40469475)
chr8 (48-174)||(45112875-45112999)
chr8 (47-175)||(11287779-11287907)
chr8 (131-182)||(11288914-11288965)
chr8 (131-178)||(24483143-24483190)
chr8 (102-180)||(5514295-5514372)
chr8 (102-180)||(32968454-32968532)
chr8 (131-180)||(11456636-11456685)
chr8 (46-175)||(30570225-30570353)
chr8 (102-179)||(38980069-38980146)
chr8 (102-179)||(39011166-39011243)
chr8 (48-115)||(23169962-23170029)
chr8 (102-178)||(38974795-38974871)
chr8 (102-178)||(39005893-39005969)
[»] chr3 (55 HSPs)
chr3 (47-179)||(54540760-54540892)
chr3 (34-180)||(7758400-7758546)
chr3 (37-177)||(8456479-8456618)
chr3 (46-182)||(19984845-19984981)
chr3 (47-180)||(7267642-7267774)
chr3 (30-179)||(46721173-46721322)
chr3 (29-178)||(51469972-51470121)
chr3 (38-150)||(6249637-6249748)
chr3 (36-178)||(46719941-46720083)
chr3 (48-179)||(54539754-54539885)
chr3 (37-180)||(47609695-47609838)
chr3 (48-178)||(47614185-47614315)
chr3 (38-179)||(29932660-29932800)
chr3 (38-179)||(29981814-29981954)
chr3 (47-183)||(7268797-7268932)
chr3 (38-180)||(23769855-23769996)
chr3 (37-175)||(23770367-23770505)
chr3 (49-179)||(55191967-55192096)
chr3 (34-183)||(11670379-11670528)
chr3 (36-181)||(47610539-47610684)
chr3 (37-181)||(29931223-29931367)
chr3 (37-181)||(29980377-29980521)
chr3 (29-180)||(51470407-51470557)
chr3 (46-180)||(19986039-19986175)
chr3 (24-178)||(52840551-52840705)
chr3 (102-180)||(53614817-53614895)
chr3 (48-180)||(12700173-12700303)
chr3 (47-175)||(54986977-54987103)
chr3 (37-182)||(51347264-51347409)
chr3 (29-180)||(534497-534648)
chr3 (48-180)||(8875904-8876036)
chr3 (85-179)||(24516459-24516553)
chr3 (131-180)||(47615602-47615651)
chr3 (47-115)||(4271503-4271571)
chr3 (47-178)||(49216247-49216378)
chr3 (29-181)||(51038742-51038894)
chr3 (60-169)||(6170281-6170388)
chr3 (85-178)||(535790-535883)
chr3 (37-78)||(46492977-46493018)
chr3 (47-179)||(52839036-52839168)
chr3 (49-180)||(11671313-11671443)
chr3 (49-159)||(34019117-34019227)
chr3 (47-181)||(22776782-22776916)
chr3 (142-183)||(31039257-31039298)
chr3 (126-175)||(39843054-39843103)
chr3 (29-178)||(51037536-51037684)
chr3 (103-183)||(5001195-5001275)
chr3 (48-108)||(47615548-47615608)
chr3 (39-94)||(10584003-10584057)
chr3 (47-150)||(31645001-31645104)
chr3 (37-175)||(40426738-40426877)
chr3 (49-80)||(53897200-53897231)
chr3 (102-188)||(52281572-52281658)
chr3 (39-115)||(784909-784985)
chr3 (102-182)||(52276300-52276380)
[»] scaffold0294 (2 HSPs)
scaffold0294 (29-180)||(5390-5541)
scaffold0294 (32-191)||(4429-4588)
[»] scaffold0019 (2 HSPs)
scaffold0019 (40-177)||(61422-61559)
scaffold0019 (40-178)||(60090-60228)
[»] scaffold0320 (1 HSPs)
scaffold0320 (48-180)||(19486-19618)
[»] scaffold0003 (3 HSPs)
scaffold0003 (29-182)||(49385-49538)
scaffold0003 (131-183)||(39339-39391)
scaffold0003 (131-180)||(43564-43613)
[»] scaffold1303 (1 HSPs)
scaffold1303 (29-187)||(1430-1588)
[»] scaffold0632 (1 HSPs)
scaffold0632 (51-180)||(3282-3410)
[»] scaffold2034 (1 HSPs)
scaffold2034 (47-178)||(233-364)
[»] scaffold0586 (1 HSPs)
scaffold0586 (60-189)||(6332-6461)
[»] scaffold0302 (2 HSPs)
scaffold0302 (47-178)||(18746-18877)
scaffold0302 (102-180)||(17468-17546)
[»] scaffold0059 (1 HSPs)
scaffold0059 (48-150)||(3703-3805)
[»] scaffold0186 (1 HSPs)
scaffold0186 (48-178)||(23081-23209)
[»] scaffold0045 (2 HSPs)
scaffold0045 (40-115)||(48370-48444)
scaffold0045 (102-178)||(49109-49185)
[»] scaffold0093 (2 HSPs)
scaffold0093 (29-177)||(2417-2564)
scaffold0093 (29-177)||(7040-7187)
[»] scaffold0049 (2 HSPs)
scaffold0049 (56-179)||(7394-7517)
scaffold0049 (48-115)||(7890-7957)
[»] scaffold0112 (1 HSPs)
scaffold0112 (29-178)||(37148-37296)
[»] scaffold0227 (1 HSPs)
scaffold0227 (102-178)||(144-220)


Alignment Details
Target: chr7 (Bit Score: 175; Significance: 4e-94; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 179 - 353
Target Start/End: Complemental strand, 4826477 - 4826303
Alignment:
Q  179 tatttaatattatcaatgctttatgctttgtatcctagatagggacatttttcctttatattccaaatcataccagaaatgaaatttattttaattaata 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4826477 tatttaatattatcaatgctttatgctttgtatcctagatagggacatttttcctttatattccaaatcataccagaaatgaaatttattttaattaata 4826378  T
Q  279 gtttaacaaatgcattttgcctcaccttcttgatgtaatatgtagttgttttctcgtggttaatttggctacgtg 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4826377 gtttaacaaatgcattttgcctcaccttcttgatgtaatatgtagttgttttctcgtggttaatttggctacgtg 4826303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 7500584 - 7500449
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||||||||| ||||||| | |||||||||| ||| | |||||||| ||||  ||||||||||||  ||||||| |||||||||    
T  7500584 gtcaaaattgaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttg 7500485  T
Q  148 aaacttaaggggggaaaagtgcactttagcctattta 184  Q
    ||| |||| ||||||||||||||||||||||| ||||    
T  7500484 aaagttaa-gggggaaaagtgcactttagccttttta 7500449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 22630408 - 22630562
Alignment:
Q  33 ataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaa 132  Q
    ||||||||||| |  |||||||||||||||||||| ||||| | ||||||| || ||||||| ||| ||||||||||||||||  || |||| || | ||    
T  22630408 ataagcgttgaataagtcaaaattgaccaaaaggaccaaagatacaaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaa 22630507  T
Q  133 aattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatttaata 187  Q
    ||||| |||||||||||| ||| || |||||||||||||||||||||| ||||||    
T  22630508 aattgcaagtttttgaaagttatggagggaaaagtgcactttagcctaattaata 22630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 7501823 - 7501955
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||| ||||| ||||||| | ||| |||||||||| | |||||||| ||||| |||||||| || | ||||||| |||||||||    
T  7501823 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttg 7501922  T
Q  148 aaacttaaggggggaaaagtgcactttagccta 180  Q
    ||| |||  ||||||||||||||||||||||||    
T  7501923 aaagttagagggggaaaagtgcactttagccta 7501955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 3227546 - 3227697
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||| |||||||||||| |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  ||||||| ||     
T  3227546 ccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtacttaggggg 3227645  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    | ||||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  3227646 ccaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagccta 3227697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 127484 - 127335
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||| |||||||||||  |||||||| |||||||||||   | |||||||||| ||| || ||||||| |||||  ||||||| |||    
T  127484 ccaaatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaattgggctaaatcttagggggct-aaattgtggttttggtacttagggga 127386  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    | ||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  127385 ccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagccta 127335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 31949471 - 31949320
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||| |||||||||||| |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  ||||||| ||     
T  31949471 ccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttaggggg 31949372  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    | ||||||| |||||||||||| ||| || ||||||||||||||||||||||    
T  31949371 ccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagccta 31949320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 37 - 178
Target Start/End: Complemental strand, 31659764 - 31659622
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||  ||||||||||||||||||||||||| |||||| | | |||||||||| ||| | ||||||||||||||  ||||||| ||   ||||||    
T  31659764 gcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaatt 31659665  T
Q  137 gaaagtttttgaaacttaagggggg-aaaagtgcactttagcc 178  Q
    | |||||||||||| ||| |||||| |||||||||||||||||    
T  31659664 gtaagtttttgaaagttagggggggtaaaagtgcactttagcc 31659622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 178
Target Start/End: Original strand, 47525326 - 47525468
Alignment:
Q  36 agcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaat 135  Q
    |||||||||| |||||||||||  |||||||| ||||||||||| | | |||||||||| |||    ||||||| ||||| |||||||| || |||||||    
T  47525326 agcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaat 47525425  T
Q  136 tgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    || |||||||||||| |||  ||||||||||||||||||||||    
T  47525426 tgcaagtttttgaaagttagagggggaaaagtgcactttagcc 47525468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 31949754 - 31949907
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||| |||||||||||| |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  || |||| ||     
T  31949754 ccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtatttaggggg 31949853  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatt 182  Q
    | ||||||| |||||||||||| ||| |||||||| ||||||||||||||||||    
T  31949854 ccaaaattgcaagtttttgaaagttagggggggaagagtgcactttagcctatt 31949907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 17781802 - 17781663
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||||||||||||||  |||||||| ||||||||||| | | |||||||||| |||  | ||||||| |||||  ||||||| ||   ||||||    
T  17781802 gcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaatt 17781703  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttag 176  Q
    | |||||||||||| ||| |||||||||||||||||||||    
T  17781702 gcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 18371554 - 18371424
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||||||||| ||||||    |||||||||| ||| | ||||||||||||||  ||||||  || | ||||||| |||||||||    
T  18371554 gtcaaaattgaccaaaaggatcaaagatgcaaatgtgctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttg 18371455  T
Q  148 aaacttaaggggggaaaagtgcactttagcc 178  Q
    ||| ||| | |||||||||||||||||||||    
T  18371454 aaagttaggaggggaaaagtgcactttagcc 18371424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 3227256 - 3227109
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||| |||||||||||  |||||||| ||||||||||| | | ||||||||||||||    ||||||| |||||  ||||||| ||     
T  3227256 ccaaatcagcgttgactaggtcaaaattgttcaaaaggaccaaagttgcaatggggctaaatcttaagggggctaaattgtggttttggtacttaggggg 3227157  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagc 177  Q
    | ||||||| |||||||||||| || ||||||| |||||||||||||||    
T  3227156 ccaaaattgcaagtttttgaaaatt-agggggggaaagtgcactttagc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 22629616 - 22629479
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||| ||||| ||||||| | |||||||||| ||| | ||||||||||||||  |||||||  | | ||||||  |||||||||    
T  22629616 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagtttttg 22629517  T
Q  148 aaacttaag---gggggaaaagtgcactttagcctatt 182  Q
    ||| |||||   ||||||||| ||||||||||||||||    
T  22629516 aaaattaagggagggggaaaaatgcactttagcctatt 22629479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 18372428 - 18372544
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||| ||||| | ||||| | |||||||||| ||| | ||||||||||||||  ||||||| || | ||||||| |||||||||    
T  18372428 gtcaaaattgaccaaaaggaccaaagatacaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttg 18372527  T
Q  148 aaacttaaggggggaaaa 165  Q
    ||| || |||||||||||    
T  18372528 aaaatt-aggggggaaaa 18372544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 42886256 - 42886389
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||||||||| |||||||| ||||||  | |||||||||| ||| ||||||||||||||||  || |||| ||   ||||||| || |||||    
T  42886256 ggtcaaaattgaccaaaatgatcaaagatgcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaattttt 42886355  T
Q  147 gaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||| ||| | || ||||||||||||||| ||||    
T  42886356 gaaagttaggaggagaaaagtgcactttaaccta 42886389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 11658472 - 11658376
Alignment:
Q  85 ctaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctat 181  Q
    |||| |||| |||||| ||||||||||||||  ||| ||| || ||||||||| | |||||||||| ||||||||||||||||||| ||||||||||    
T  11658472 ctaattcttgagggaccaaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagcctat 11658376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 188
Target Start/End: Original strand, 14999125 - 14999263
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||||| |||||| ||||| ||||||| | |||||||||| ||  | ||||||||||||||  || |||| ||   ||||||| ||| ||||    
T  14999125 ggtcaaaattgacctaaaggaacaaagatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaag-tttt 14999223  T
Q  147 gaaacttaaggggggaaaagtgcactttagcctatttaatat 188  Q
    |||| || ||||||||||||||||| ||||||||||||||||    
T  14999224 gaaaatt-aggggggaaaagtgcac-ttagcctatttaatat 14999263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 31660968 - 31661111
Alignment:
Q  35 aagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaa 134  Q
    ||||||||||| ||||||||||  |||||||||||||| |||||| |||  ||||| ||| |||||||||||| |||||||  ||| || |||   ||||    
T  31660968 aagcgttgactaggtcaaaattc-ccaaaaggatcaaatttgcaatgaggttaaattttaggggactaaaattatagtttttgtacgtaaagggtcaaaa 31661066  T
Q  135 ttgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||| || ||||||||| |||  | ||| |||||||||||||||||    
T  31661067 ttgcaaatttttgaaagttagagaggggaaagtgcactttagcct 31661111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 21505542 - 21505405
Alignment:
Q  50 caaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaa 149  Q
    |||||||| ||||||||| ||||| ||||||| | |||||||||| |||   ||||||||||||||  ||  | | || | ||||| | || ||||||||    
T  21505542 caaaattgtccaaaaggaccaaagatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaa 21505443  T
Q  150 acttaaggggggaaaagtgcactttagcctatttaatatt 189  Q
    | |||  |||||||||||||||||||||||||||| ||||    
T  21505442 agtta--gggggaaaagtgcactttagcctatttattatt 21505405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 47369911 - 47369780
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatactta-gaggactaaaattgaaagttttt 146  Q
    |||||||||||||||||  |  |||| ||||||| | |||||||||||||| | |||||| |||||||  |||||| |||| ||||||||| ||||||||    
T  47369911 gtcaaaattgaccaaaataactaaagatgcaaaggggctaaatcttaaggggccaaaattatagtttttgtacttatgagg-ctaaaattgcaagttttt 47369813  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||| ||| |||   ||||||||| ||||||||    
T  47369812 gaaagttaggggaaaaaaagtgcattttagcct 47369780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 17782579 - 17782657
Alignment:
Q  103 aaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctat 181  Q
    ||||||| |||||  ||||||| || | ||||||| |||||||||||| |||  |||||||||||||||||||||||||    
T  17782579 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctat 17782657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 11662576 - 11662649
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    |||||| |||||||  ||| |||||  ||||||||| |||||||||||| |||||||||||||| |||||||||    
T  11662576 aaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 30439320 - 30439460
Alignment:
Q  39 gttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattga 138  Q
    |||||||  ||||||||||| ||||| || | ||| ||||||| | |||||||||| ||||||||||||||||||||   || |||   |  ||||| |     
T  30439320 gttgactaagtcaaaattgagcaaaatgaccgaaggtgcaaaggggctaaatcttaggggactaaaattgtagtttttgaacataggaaatcaaaatcgt 30439419  T
Q  139 aagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    || ||||||||| |||||||| | ||||||||||||||||||    
T  30439420 aactttttgaaagttaaggggag-aaagtgcactttagccta 30439460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 5111481 - 5111441
Alignment:
Q  139 aagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  5111481 aagtttttgaaacttaaggggtgaaaagtgcactttagcct 5111441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 34352756 - 34352888
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| |||||| ||| ||||||||||  ||  |||||||||  || | |||||| ||||||   ||||||  |||| ||||| ||||||||||    
T  34352756 ggtcaaaattggccaaaatgattaaagttgcaataaggttaaatcttagagggccaaaattatagtttatgtacttaagggaccaaaatagaaagttttt 34352855  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||| |||  || | ||||||||||||||||||    
T  34352856 gaaaattagaggtgaaaaagtgcactttagcct 34352888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 128553 - 128699
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| ||| |||||| |||||||||||   |||||| |||||||||||| | | || ||||||| |||    ||||||| |||||  ||||||| ||     
T  128553 ccaaatcagcattgactaggtcaaaattggttaaaagggtcaaagttgcaatggggctgaatcttaggggggctaaattgtggttttggtacttaggggg 128652  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcacttta 175  Q
      ||||||| || ||||||||| ||| || |||||||||||||||||    
T  128653 tcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttta 128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 14998107 - 14998048
Alignment:
Q  51 aaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgta 110  Q
    ||||||||||||||||| ||||| ||||||| | |||||||||| ||| | |||||||||    
T  14998107 aaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgta 14998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 6618348 - 6618291
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta 94  Q
    ||||||||| |||||||||||| ||||| ||||||| |||||| ||| | ||||||||    
T  6618348 gcgttgactaggtcaaaattgatcaaaatgatcaaatttgcaatgaggcaaaatctta 6618291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 9822334 - 9822371
Alignment:
Q  142 tttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  9822334 tttttaaaacttaaggggtgaaaagtgcactttagcct 9822371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 10724259 - 10724296
Alignment:
Q  142 tttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  10724259 tttttaaaacttaaggggtgaaaagtgcactttagcct 10724296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 21508447 - 21508505
Alignment:
Q  120 cttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||||||| | |||||||||| ||||||||| ||||||||  |||| ||||||||||||||    
T  21508447 cttagagggccaaaattgaaactttttgaaagttaagggg--aaaaatgcactttagccta 21508505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 32253452 - 32253501
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||| || |||||| |||||||||| ||||||||| |||||||||||    
T  32253452 aaaattgcaactttttgcaacttaagggtggaaaagtgtactttagccta 32253501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 34351585 - 34351520
Alignment:
Q  85 ctaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaa 150  Q
    ||||||||||||||  ||||||||||||||  |||||| |||  | ||||||| ||||||||||||    
T  34351585 ctaaatcttaaggggttaaaattgtagtttctatacttggagagccaaaattgcaagtttttgaaa 34351520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 48933796 - 48933730
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    |||||||||||   ||||||||||||||||||  |||  ||||||||||||||  ||||||||||||||    
T  48933796 ggtcaaaattggaaaaaaggatcaaagttgca--gaggataaatcttaagggatcaaaattgtagtttt 48933730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 770731 - 770791
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaatt 107  Q
    |||||||||||||||||| |||||||| ||||||| | |||||| ||| ||| | ||||||    
T  770731 ggtcaaaattgaccaaaatgatcaaagatgcaaaggggctaaattttagggggccaaaatt 770791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 20163610 - 20163658
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||||||| |||||||||||| ||| ||| ||| ||||||||||||||||    
T  20163610 aaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcct 20163658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 34174010 - 34174085
Alignment:
Q  104 aattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||||| |||||  ||||||| || | ||||||| ||| ||||||||  || |||||||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagccta 34174085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 115
Target Start/End: Complemental strand, 46482727 - 46482660
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagtttt 115  Q
    ||||||||||||||||||||| |||  |||||| |||| ||||||||| |||| ||||||| |||||||    
T  46482727 gtcaaaattgaccaaaaggataaaaaatgcaaaggaga-taaatcttaggggattaaaattatagtttt 46482660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 48934928 - 48935004
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    |||||| |||||||  ||||||||||   ||||||  |||||||||||| ||| ||| |||||| ||||||||||||    
T  48934928 aaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagcc 48935004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 179 - 353
Target Start/End: Complemental strand, 38728065 - 38727891
Alignment:
Q  179 tatttaatattatcaatgctttatgctttgtatcctagatagggacatttttcctttatattccaaatcataccagaaatgaaatttattttaattaata 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38728065 tatttaatattatcaatgctttatgctttgtatcctagatagggacatttttcctttatattccaaatcataccagaaatgaaatttattttaattaata 38727966  T
Q  279 gtttaacaaatgcattttgcctcaccttcttgatgtaatatgtagttgttttctcgtggttaatttggctacgtg 353  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38727965 gtctaacaaatgcattttgcctcaccttcttgatgtaatatgtagttgttttctcgtggttgatttggctacgtg 38727891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 178
Target Start/End: Complemental strand, 51684514 - 51684366
Alignment:
Q  30 caaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggac 129  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||| ||||||| | |||||||||| ||| | |||||||||||||| |||| ||| || |    
T  51684514 caaatcagcgttgacttggtcaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggc 51684415  T
Q  130 taaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
     ||||||| || ||||| ||| |||||||||||||||||||||||||||    
T  51684414 caaaattgcaactttttaaaagttaaggggggaaaagtgcactttagcc 51684366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 34 - 180
Target Start/End: Original strand, 11437156 - 11437302
Alignment:
Q  34 taagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaa 133  Q
    |||||||||||| ||||||||||||||||||||||||||| || |||  |  ||||||||| ||| | ||||||||||||||  ||||||  |||| |||    
T  11437156 taagcgttgactcggtcaaaattgaccaaaaggatcaaagatgtaaaagggttaaatcttagggggccaaaattgtagtttttgtacttaagggaccaaa 11437255  T
Q  134 attgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||| |||||||||||| ||||||||| |||||||||||||||||||    
T  11437256 attgcaagtttttgaaagttaagggggaaaaagtgcactttagccta 11437302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 35 - 175
Target Start/End: Original strand, 24426033 - 24426173
Alignment:
Q  35 aagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaa 134  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||| | | |||||||||| ||||||||||||||||||||  ||||||| || | ||||    
T  24426033 aagcgttgactaggtcaaaattgaccaaaagtatcaaatttgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaa 24426132  T
Q  135 ttgaaagtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    ||| |||||||||||| |||  ||||| |||||||||||||    
T  24426133 ttgcaagtttttgaaagttagaggggggaaagtgcacttta 24426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 24422941 - 24422798
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||  ||||||||||||||||||||||||| |||||| | | |||||||||| ||| | ||||||||||||||  ||||||| ||   ||||||    
T  24422941 gcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaatt 24422842  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    | |||||||||||| ||||||||| |||||||||||||||||||    
T  24422841 gcaagtttttgaaagttaagggggtaaaagtgcactttagccta 24422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 37 - 179
Target Start/End: Complemental strand, 52275109 - 52274967
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||  ||||||||||||||||||||||||| |||||| ||| |||||||||| ||| | ||||||||||||||  ||||||| ||   ||||||    
T  52275109 gcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatgaggctaaatcttaggggcccaaaattgtagtttttgtacttagggggtcaaaatt 52275010  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    | |||||||||||| ||| ||||| ||||||||||||||||||    
T  52275009 gcaagtttttgaaagttaggggggtaaaagtgcactttagcct 52274967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 50680461 - 50680327
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||||||||| ||||||| |  ||||||||| |||||||||||| ||||||| |||||||| || | ||||||| |||||||||    
T  50680461 gtcaaaattgaccaaaaggatcaaagatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagtttttg 50680362  T
Q  148 aaacttaaggggggaaaagtgcactttagcctattt 183  Q
     || |||| ||||||||| ||||||||| |||||||    
T  50680361 gaagttaa-gggggaaaaatgcactttaacctattt 50680327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 37 - 179
Target Start/End: Complemental strand, 11436183 - 11436041
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    ||||||||| ||||||||||||||||||| | ||||| ||||||  |  ||||||||| ||| | |||||||||||||| ||||||| | | | ||||||    
T  11436183 gcgttgactcggtcaaaattgaccaaaagaaccaaagatgcaaatgggttaaatcttagggggccaaaattgtagtttttatacttaaaaggccaaaatt 11436084  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    | |||||||||||| |||| |||||||||||||||||||||||    
T  11436083 gcaagtttttgaaagttaaagggggaaaagtgcactttagcct 11436041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 43377861 - 43377721
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||| | | | |||||| || |||| ||||||| ||||||||||||    
T  43377861 gcgttgacttggtcaaaattgaccaaaaggatcaaaggtgtaaagagactaaattttaggaggccaaaattataatttttatacttaaaggactaaaatt 43377762  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagc 177  Q
    | |||| ||| ||| ||||| ||| |||||| || ||||||    
T  43377761 gcaagtgtttaaaaattaagcgggaaaaagtacattttagc 43377721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 37 - 179
Target Start/End: Complemental strand, 52827488 - 52827346
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||||||||||||||  |||||||| ||||||||||| | | |||||||||| |||  | ||||||| |||||  ||||||| ||   ||||||    
T  52827488 gcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaatt 52827389  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    | |||||||||||| ||| ||||||||||||||||||||||||    
T  52827388 gcaagtttttgaaagttagggggggaaaagtgcactttagcct 52827346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 39698693 - 39698562
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||||||  || | |||||| ||||||   ||||||| || | ||||||||||||||||    
T  39698693 ggtcaaaattgaccaaaaggattaaagttgcaacgaggctaaatcttagtggcc-aaaattatagtttctgtacttagggggccaaaattgaaagttttt 39698595  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
     ||| |||||||||| |||||||||||||||||    
T  39698594 aaaagttaaggggggtaaagtgcactttagcct 39698562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 35594364 - 35594216
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    ||||||||||||||||   |||||||||| | ||||||| ||||| ||||||| | |||||| ||| ||| | |||||||||||||| |||||||| ||     
T  35594364 ccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttaggggtc-aaaattgtagttttaatacttaggggt 35594266  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    | ||||||| |||||||||||| ||| ||| ||||||||||||||||||||    
T  35594265 c-aaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 35594216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 41366083 - 41366232
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||| |||||||| ||  |||||||| ||||||||||| | | |||||||||| ||| ||||| |||| ||||| |||||||  ||     
T  41366083 ccaaatcagcgttgactaggtcaaaagtggtcaaaaggaccaaagttgcaatggggctaaatcttagggggctaaa-ttgtggttttgatacttaagggg 41366181  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||||||||| | |||||||||| ||| | ||||||||||||||||||||||    
T  41366182 ctaaaattgcatgtttttgaaagttaggaggggaaaagtgcactttagcct 41366232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 179
Target Start/End: Complemental strand, 36612996 - 36612852
Alignment:
Q  34 taagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaa 133  Q
    |||||||||| |  || |||||||||||||| || ||||| ||||||| |||||||||||| |||  |||||||||||||||  |||||| ||  | |||    
T  36612996 taagcgttgaataagttaaaattgaccaaaatgaccaaagatgcaaagggactaaatcttagggggttaaaattgtagtttttgtactta-agatccaaa 36612898  T
Q  134 attgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||| || ||||||||| |||||||||||||| |||||||||||||    
T  36612897 attgcaaatttttgaaagttaaggggggaaaaatgcactttagcct 36612852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 45157178 - 45157310
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    |||||||||||||||||||||| ||||| ||||||| |  |||||||||| ||   ||||||||||||||  ||| ||| || | ||||||| |||||||    
T  45157178 tggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttt 45157277  T
Q  146 tgaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||||||| ||||||| |||||||||||||||||    
T  45157278 tgaaactt-agggggggaaagtgcactttagcct 45157310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 39699737 - 39699867
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||||||||||||| |||||||||| | | |||||||||| ||| | |||||||||||||   ||||||| ||   ||||||| ||||| ||    
T  39699737 ggtcaaaattgaccaaaaggattaaagttgcaatggggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttatt 39699836  T
Q  147 gaaacttaaggggggaaaagtgcactttagcc 178  Q
    |||| || ||||||||||||||||||||||||    
T  39699837 gaaagtt-aggggggaaaagtgcactttagcc 39699867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 51685725 - 51685868
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    ||||||| ||||| ||||||| ||||||||| ||||| ||||||| | |||||||||| |||   ||||||||||||||  ||| |||||| | |||||     
T  51685725 gcgttgaattggttaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatc 51685824  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    | || ||||||||| |||  ||||||||||||||||||||||||    
T  51685825 gcaactttttgaaagttagagggggaaaagtgcactttagccta 51685868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 39153085 - 39153214
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta-agggactaaaattgtagttttcatacttagaggactaaaattgaaagttt 144  Q
    |||||||||||||||||||||| ||||| ||||||| |  ||||||||| |||| | ||||||||||||||  ||| ||  || | ||||||| ||||||    
T  39153085 tggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtc-aaaattgtagtttttgtacataaggggccaaaattgcaagttt 39153183  T
Q  145 ttgaaacttaaggggggaaaagtgcacttta 175  Q
    |||||||||||||||| ||||||||||||||    
T  39153184 ttgaaacttaagggggaaaaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 52276121 - 52276266
Alignment:
Q  35 aagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaa 134  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||| | | |||||||||| ||||||||| || |||||||  ||||||| || | ||||    
T  52276121 aagcgttgactaggtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggggactaaatttatagtttttgtacttagggggccaaaa 52276220  T
Q  135 ttgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||  || ||||||||| |||   |||| ||||||||||||| ||||    
T  52276221 ttacaaatttttgaaagttagaagggggaaagtgcactttaaccta 52276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 44411936 - 44412032
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtt 143  Q
    ||||||||||| | ||||||||||||||||||||| | ||||||||||| ||  |||||||||||||||  ||||||| |||||||||||| |||||    
T  44411936 ggtcaaaattggcaaaaaggatcaaagttgcaaagggcctaaatcttaaaggggtaaaattgtagtttttgtacttaggggactaaaattgcaagtt 44412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 50681580 - 50681705
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttga 148  Q
    |||||||||| ||| |||| ||||| ||||||||| |||||||    ||||| || ||||||||||| ||| ||||||  | ||||||| ||||||||||    
T  50681580 tcaaaattgatcaataggaccaaagatgcaaagaggctaaatc----gggaccaatattgtagtttttatagttagagagccaaaattgcaagtttttga 50681675  T
Q  149 aacttaaggggggaaaagtgcactttagcc 178  Q
    || ||||| |||||||||||||||||||||    
T  50681676 aaattaagaggggaaaagtgcactttagcc 50681705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 35066973 - 35067108
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||||||||||||  |   |||||||| | |||||| ||| ||| | ||||||||||||||  | | ||| || | ||||| | || ||||||    
T  35066973 gtcaaaattgaccaaaaggactattattgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttg 35067072  T
Q  148 aaacttaaggggggaaaagtgcactttagcctattt 183  Q
    ||||||||||||||||||||||||||||||||||||    
T  35067073 aaacttaaggggggaaaagtgcactttagcctattt 35067108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 45148711 - 45148581
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| ||||||||| ||||| ||||||| |  ||||||||| |||   ||||||||||||||  ||||||| || | ||||||| ||||||||    
T  45148711 ggtcaaaattggccaaaaggaccaaagatgcaaaggggttaaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagttttt 45148613  T
Q  147 gaaacttaaggggggaaaagtgcactttagcc 178  Q
    |||| ||||| ||| |||||||||||||||||    
T  45148612 gaaagttaagcgggaaaaagtgcactttagcc 45148581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 52828022 - 52828173
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||| |||||||||||  |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  ||||||| |      
T  52828022 ccaaatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggag 52828121  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    | ||||||| |||||||||||| |||  ||||||||||||||||||| ||||    
T  52828122 ccaaaattgcaagtttttgaaaattagagggggaaaagtgcactttaaccta 52828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 36613875 - 36614005
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||| ||||||||  |||||||||||||| |||||||||| |||   ||||||||||||||  ||||||| || | ||||||  ||||||||     
T  36613875 gtcaaaattgatcaaaaggactaaagttgcaaagaggctaaatcttagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagttttta 36613974  T
Q  148 aaacttaaggggggaaaagtgcactttagcc 178  Q
    ||| ||| ||| |||||| ||||||||||||    
T  36613975 aaagttaggggaggaaaaatgcactttagcc 36614005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 39152063 - 39151929
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    |||||||||||||||||||||| ||||| ||||||| |  |||||||||| |    ||||||||||||||  ||| ||| || | ||||||  |||||||    
T  39152063 tggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagagtcaaaattgtagtttttgtacatagggggccaaaattacaagtttt 39151964  T
Q  146 tgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||||||||||| |||| ||||||||| ||||    
T  39151963 tgaaacttaagggggaaaaaatgcactttaaccta 39151929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 35595144 - 35595296
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattg-tagttttcatacttagagg 127  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||| ||||||| | ||||||||| |||| | ||||||| ||||||| |||| ||| ||    
T  35595144 ccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctt-aggggccaaaattgttagtttttatacatagggg 35595242  T
Q  128 actaaaattg-aaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
       |||||||  |||||||| ||| |||  ||||||||||| ||||||||||||    
T  35595243 gtcaaaattgctaagttttttaaagttagagggggaaaagtacactttagccta 35595296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 41364977 - 41364829
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||| |||||||||||| ||||| || ||||||||||| | | |||||||||| |||    ||||||| |||||  || |||| ||     
T  41364977 ccaaatcagcgttgactaggtcaaaattgatcaaaatgaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtatttaggggg 41364878  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    | ||||||| |||||||||||| || ||||| ||||||||||||||||||    
T  41364877 ccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcactttagcc 41364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 45156181 - 45156052
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    ||||||||||||||||||| || ||||| | |||||||  |||||||||  ||  |||||||||||||||  ||| |||| |   ||||||| |||||||    
T  45156181 tggtcaaaattgaccaaaaagaccaaagatacaaagaggttaaatcttagagggttaaaattgtagtttttgtacatagaaggtcaaaattgtaagtttt 45156082  T
Q  146 tgaaacttaaggggggaaaagtgcacttta 175  Q
    ||||||||||||| ||||||||| ||||||    
T  45156081 tgaaacttaagggaggaaaagtgaacttta 45156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 43058915 - 43058784
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||||||||| || |||| | ||||||||||  || ||||||||||||||||  ||||||| ||   ||||||| ||||||||     
T  43058915 gtcaaaattgaccaaaaggatcaaagatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttc 43058816  T
Q  148 aaacttaaggggggaaaagtgcactttagccta 180  Q
    ||| || |||||| ||||||| |||||| ||||    
T  43058815 aaagtt-agggggaaaaagtgtactttaaccta 43058784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 39222444 - 39222575
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||| |||||| || ||||| ||||||  | | ||||||||  || |||| ||||||||||| |||||||| || | ||||||| |||||||||    
T  39222444 gtcaaaattgcccaaaaagaccaaagatgcaaatgggcaaaatcttagagggctaacattgtagtttttatacttagggggccaaaattgcaagtttttg 39222543  T
Q  148 aaactt-aaggggggaaaagtgcactttagcc 178  Q
    ||| || ||||||| |||||||||||||||||    
T  39222544 aaagttaaagggggtaaaagtgcactttagcc 39222575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 43378673 - 43378810
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    ||||||||||||||||||| |||||||||||| |||| |||||||   |||||||||| | |   ||||||||| ||||  ||||||| |||  ||||||    
T  43378673 gcgttgacttggtcaaaatcgaccaaaaggattaaagatgcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaatt 43378772  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    | |||||||||||| |||| | | |||||||||||||||    
T  43378773 gtaagtttttgaaagttaa-gagagaaaagtgcacttta 43378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 45149940 - 45150073
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta-agggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    ||||||||||| ||||||||||||||| ||||||| | ||||||||||  |||   |||||||| |||||  ||||||  || | ||||||| |||||||    
T  45149940 ggtcaaaattggccaaaaggatcaaagatgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttt 45150039  T
Q  146 tgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||| || ||||||||||||||||||||| ||||    
T  45150040 tgaaagtt-aggggggaaaagtgcactttaaccta 45150073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 40384856 - 40384727
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| ||||||||| ||||| ||||||||| |||||| ||| ||||  ||||||||||||||  ||| |||  ||||||||||| || |||||    
T  40384856 ggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacataggagactaaaattgcaacttttt 40384757  T
Q  147 gaaactt-aaggggggaaaagtgcacttta 175  Q
    |||| || ||| ||  ||||||||||||||    
T  40384756 gaaaattaaagaggaaaaaagtgcacttta 40384727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 44404573 - 44404441
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||||||||| || ||||| ||||||  | |||||| ||| ||| | |||||| |||||||  ||||||| || |||||||||  |||||||    
T  44404573 ggtcaaaattgaccaaaatgaccaaagatgcaaattggctaaattttagggggccaaaattatagtttttgtacttagggggctaaaattgctagttttt 44404474  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||| ||| | ||| ||||||||| ||||||||    
T  44404473 gaaagttatgagggaaaaagtgcattttagcct 44404441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 2940409 - 2940334
Alignment:
Q  34 taagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgt 109  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||  ||||||||| ||||  ||||||||    
T  2940409 taagcgttgacttggtcaaaattaactaaaaggatcaaaattgcaaagaggttaaatcttaggggatcaaaattgt 2940334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 37526849 - 37526975
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||| ||||| || ||||| ||||||| | |||||||||| ||| | |||||||| ||||  ||| |||| |  | ||||||| |||||||||    
T  37526849 gtcaaaattgatcaaaaagaccaaagatgcaaaggggctaaatcttaggggcc-aaaattgtggtttctatatttagggagccaaaattgcaagtttttg 37526947  T
Q  148 aaacttaaggggggaaaagtgcacttta 175  Q
    ||| |||||||||||||||| |||||||    
T  37526948 aaagttaaggggggaaaagtacacttta 37526975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 7983198 - 7983046
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| | |||||||  |||||||||||||||||||||| ||| |||||| | |  ||||||||| |||   |||||||| ||||| |||| ||| ||     
T  7983198 ccaaatcatcgttgaccgggtcaaaattgaccaaaaggatgaaatttgcaatggggataaatcttaggggggcaaaattgtggttttgatacataggggg 7983099  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatt 182  Q
    | ||||||| ||||| |||||| || | ||| ||||||||||||||| ||||||    
T  7983098 ccaaaattgcaagttgttgaaagtt-acgggagaaaagtgcactttaacctatt 7983046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 46525753 - 46525817
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta 94  Q
    |||||||||||||||||||||||||||||||||||| ||||| | |||||||| | ||||||||||    
T  46525753 ccaaataagcgttgacttggtcaaaattgaccaaaa-gatcacaattgcaaaggggctaaatctta 46525817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 178
Target Start/End: Complemental strand, 46066664 - 46066525
Alignment:
Q  36 agcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaat 135  Q
    |||||||| |||||||||||||| ||||| ||||| || ||||||  | ||||||||| |||| ||||||||||||||||  ||| ||  || |||||||    
T  46066664 agcgttgagttggtcaaaattgatcaaaaagatcagagatgcaaattggctaaatctt-aggggctaaaattgtagtttttgtacataaggggctaaaat 46066566  T
Q  136 tgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
     | || ||||||||| |||  || |||||||||||||| ||||    
T  46066565 cgcaactttttgaaagtta--ggaggaaaagtgcacttaagcc 46066525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 14999412 - 14999282
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    ||||||||||||| |||||||||||||||||| | ||| ||||||   |  |||  ||||||||||||||  ||||||| ||   ||||||| |||||||    
T  14999412 ggtcaaaattgacaaaaaggatcaaagttgcagatgag-ctaaat---agaggatcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttt 14999317  T
Q  146 tgaaacttaaggggggaaaagtgcactttagcctat 181  Q
    ||||| ||| |||||||||||| |||||||||||||    
T  14999316 tgaaagtta-ggggggaaaagtacactttagcctat 14999282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 180
Target Start/End: Original strand, 23980464 - 23980569
Alignment:
Q  75 tgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcacttt 174  Q
    ||||||| | |||||||||| | ||| |||||| |||||||  ||||||| |  | ||||||| |||||||| ||| |||  ||||||||||||||||||    
T  23980464 tgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcacttt 23980563  T
Q  175 agccta 180  Q
    ||||||    
T  23980564 agccta 23980569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 43059977 - 43060109
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||||||||||| ||||| |||||| ||| ||||||||||||||   ||||||||||||||  ||||||  ||   ||||||  || |||||    
T  43059977 gtcaaaattgaccaaaaggaccaaagatgcaaatgag-ctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaattttt 43060075  T
Q  147 gaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||| |||  ||||| ||||| ||||||||||||    
T  43060076 gaaagttagagggggtaaagtacactttagccta 43060109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 46524687 - 46524623
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta 94  Q
    ||||||||||||||||||||||||||||| |||||| ||||| | |||||||| | ||||||||||    
T  46524687 ccaaataagcgttgacttggtcaaaattggccaaaa-gatcacaattgcaaaggggctaaatctta 46524623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 14999925 - 15000057
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||||| ||||||||||||||||||||  |||||||| ||| | |   |  ||||||| |||  ||||||| |||  ||||||| ||||||||    
T  14999925 ggtcaaaattgacaaaaaggatcaaagttgcaaatggactaaattttaggtggtcatgattgtagattttgtacttaggggatcaaaattgcaagttttt 15000024  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
     ||| ||| || || ||||||| ||||||||||    
T  15000025 aaaagttagggaggaaaaagtgaactttagcct 15000057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 30249442 - 30249588
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagttttcatacttagagg 127  Q
    |||||| ||||||||||  ||||||||||| ||||| |||||||| | |||| ||| ||||||||||||||   ||||||||||||||  ||| || | |    
T  30249442 ccaaatcagcgttgactaagtcaaaattgatcaaaaagatcaaagatacaaatgag-ctaaatcttaaggggtcaaaattgtagtttttgtacataaaag 30249540  T
Q  128 actaaaattgaaagtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    |  ||||||  || ||||||||| ||| || ||||| |||||||||||    
T  30249541 atcaaaattacaactttttgaaagttacggagggaagagtgcacttta 30249588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 33088609 - 33088719
Alignment:
Q  69 caaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtg 168  Q
    ||||||||||||| | |||||||||| ||    ||||||||||||||  |||||| |||   ||||||| |||||||||||  |||  | ||||||||||    
T  33088609 caaagttgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtg 33088708  T
Q  169 cactttagcct 179  Q
    |||||||||||    
T  33088709 cactttagcct 33088719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 7674602 - 7674524
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatt 182  Q
    ||||||||||||||  ||||||| || | ||||||| |||||||| ||| ||| ||||||||||| |||||||||||||||    
T  7674602 aaaattgtagtttttgtacttag-ggcccaaaattgcaagtttttaaaagtta-ggggggaaaagggcactttagcctatt 7674524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 33088194 - 33088095
Alignment:
Q  51 aaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaa 150  Q
    ||||||| |||||||||  ||||  |||||  | ||||||||||||||| ||||||||||||||| ||| ||||  ||  ||||||  ||||||||||||    
T  33088194 aaaattggccaaaaggactaaagaagcaaatgggctaaatcttaagggaataaaattgtagtttttatatttaggagataaaaattacaagtttttgaaa 33088095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 11190432 - 11190383
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||| || ||||| ||| |||||||| ||||||||||||||||||||    
T  11190432 aaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagccta 11190383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 39221455 - 39221402
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaat 90  Q
    ||||||| || |||||||||||||||||||| ||||| ||||||| | ||||||    
T  39221455 gcgttgaattagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaat 39221402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 39221405 - 39221357
Alignment:
Q  132 aaattgaaagtttttgaaactta-aggggggaaaagtgcactttagcct 179  Q
    |||||| |||||||||||| ||| |||||||||||||||| ||||||||    
T  39221405 aaattgcaagtttttgaaagttagaggggggaaaagtgcaatttagcct 39221357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 40390821 - 40390861
Alignment:
Q  142 tttttgaaacttaaggggggaaaagtgcactttagcctatt 182  Q
    ||||| ||||||| ||||| |||||||||||||||||||||    
T  40390821 ttttttaaacttaggggggaaaaagtgcactttagcctatt 40390861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 8e-40; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 1290158 - 1290301
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||||| |  ||||||||| ||| ||||||||||||||||  |||||||||| | ||||||    
T  1290158 gcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacttagagggccaaaatt 1290257  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    | ||| |||||||| |||||||||||||||||||||||||||||    
T  1290258 gcaagattttgaaagttaaggggggaaaagtgcactttagccta 1290301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 19750527 - 19750673
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| |||||| | | |||||||||| |||  |||||||||||||||  ||||||| ||     
T  19750527 ccaaataagctttgacttggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttaggggg 19750626  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttag 176  Q
    | ||||||| |||||||| ||| || ||||||||||||||||||||||    
T  19750627 ccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 19789279 - 19789133
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| |||||| | | |||||||||| |||  |||||||||||||||  ||||||| ||     
T  19789279 ccaaataagctttgacttggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttaggggg 19789180  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttag 176  Q
    | ||||||| |||||||| ||| || ||||||||||||||||||||||    
T  19789179 ccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 34 - 180
Target Start/End: Complemental strand, 1289241 - 1289095
Alignment:
Q  34 taagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaa 133  Q
    |||||||||||| ||||||||||||||||||||| ||||| ||||| | |  ||||||||||| | |||||||||||||||| ||||||||||||  |||    
T  1289241 taagcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaagggggttaaatcttaagaggctaaaattgtagtttttatacttagaggatcaaa 1289142  T
Q  134 attgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||  || | ||||||| |||||||||||||||| ||||||| ||||    
T  1289141 attacaaatatttgaaagttaaggggggaaaagttcactttaaccta 1289095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 25685083 - 25684934
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  ||||||||||     
T  25685083 ccaaatcagcgttgacttggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagaggg 25684984  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
      ||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  25684983 tcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 25684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 179
Target Start/End: Complemental strand, 10470688 - 10470545
Alignment:
Q  36 agcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaat 135  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| | | |||||||||| |||    |||||||  ||||  ||||||||||   |||||    
T  10470688 agcgttgacttggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaat 10470589  T
Q  136 tgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    || |||||||||||| ||||||||||||||||||||||||||||    
T  10470588 tgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 10470545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 13509319 - 13509461
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||||| | |||||||||| ||||  ||||||||||||||||||||| | || | ||||||    
T  13509319 gcgttgacttggtcaaaattggccaaaaggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaatt 13509418  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    | || ||||| ||| || ||||||||||||| ||||||||||||    
T  13509419 gcaattttttaaaagtt-aggggggaaaagtacactttagccta 13509461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 52491578 - 52491711
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||||||||||||| |||||||||| | | |||||| ||| ||| | |||||||||||||   || ||||||||| ||||||| |||||||||    
T  52491578 gtcaaaattgaccaaaaggattaaagttgcaatggggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttg 52491677  T
Q  148 aaacttaaggggggaaaagtgcactttagcctat 181  Q
    ||| ||||||| |||||||| |||||||||||||    
T  52491678 aaagttaagggtggaaaagtacactttagcctat 52491711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 8757804 - 8757673
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||||||||||||| ||| |||||| | | |||||||||||||| | |||||||||||||   ||||||| || ||||||||| |||||||||    
T  8757804 gtcaaaattgaccaaaaggattaaaattgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttg 8757705  T
Q  148 aaacttaaggggggaaaagtgcactttagccta 180  Q
    ||| |||| |||| |||||||||||||||||||    
T  8757704 aaagttaa-ggggaaaaagtgcactttagccta 8757673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 36 - 183
Target Start/End: Original strand, 10471347 - 10471494
Alignment:
Q  36 agcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaat 135  Q
    |||||||||| |||||||||||  |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  ||||||| || | |||||    
T  10471347 agcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaat 10471446  T
Q  136 tgaaagtttttgaaacttaaggggggaaaagtgcactttagcctattt 183  Q
    || |||||||||||| ||||||||||||||||||||||||||| ||||    
T  10471447 tgcaagtttttgaaagttaaggggggaaaagtgcactttagccaattt 10471494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 31599920 - 31599788
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| | ||||||||||||||||||||| | |||||||||| ||||| ||||||||||||||  ||||||| ||   ||||||| ||||||||    
T  31599920 ggtcaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 31599821  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
     ||| ||| ||||| |||||||||||| |||||    
T  31599820 aaaagttaggggggaaaaagtgcacttcagcct 31599788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 35935503 - 35935631
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| |||||||||| |||||||||| ||| |||||||||| ||| | |||||||||||||   ||||||| || ||||||||| || |||||    
T  35935503 ggtcaaaattggccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaattttt 35935602  T
Q  147 gaaacttaaggggggaaaagtgcacttta 175  Q
     ||| |||||||||| |||||||||||||    
T  35935603 aaaagttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 1835054 - 1835205
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    ||||||||||||||||   |||||||||| | ||||||| ||||| ||||||| | |||||||||| |||   |||||||||||||| |||||||| ||     
T  1835054 ccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagttttaatacttaggggg 1835153  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
      ||||||| |||||||||||| ||| ||  |||||||||||||||||||||    
T  1835154 tcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttagccta 1835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 49 - 175
Target Start/End: Original strand, 8758809 - 8758935
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttga 148  Q
    |||||||||||||||||||| ||| |||||| |   |||||||||||||| | |||||||||||||   ||||||| || | ||||||| ||||||||||    
T  8758809 tcaaaattgaccaaaaggattaaaattgcaatggagctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttga 8758908  T
Q  149 aacttaaggggggaaaagtgcacttta 175  Q
    || ||||||||||||||||||| ||||    
T  8758909 aagttaaggggggaaaagtgcatttta 8758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 25685781 - 25685925
Alignment:
Q  36 agcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaat 135  Q
    |||||||||| |||||||||||  |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  ||||||| || | |||||    
T  25685781 agcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaat 25685880  T
Q  136 tgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    || |||||||||||| |||  ||||||||||||||||||||||||    
T  25685881 tgcaagtttttgaaagttagagggggaaaagtgcactttagccta 25685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 31600955 - 31601086
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||||   ||||||||||||||  ||||||| ||   ||||||| ||||||||    
T  31600955 ggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 31601054  T
Q  147 gaaacttaaggggggaaaagtgcactttagcc 178  Q
     ||| |||  |||| |||||||||||||||||    
T  31601055 aaaagttagaggggaaaaagtgcactttagcc 31601086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 49307991 - 49308132
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaa 139  Q
    ||||||||||||||||||||| |||||| ||||| |||  || | | ||||| || ||| | ||||||||||||||  ||||||| || | ||||||| |    
T  49307991 ttgacttggtcaaaattgacccaaaggaccaaagatgcgcaggggcaaaatcatagggggc-aaaattgtagtttttgtacttagggggccaaaattgca 49308089  T
Q  140 agtttttgaaacttaaggggggaaaagtgcactttagcctattt 183  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  49308090 agtttttgaaagtta-ggggggaaaagtgcactttagcctattt 49308132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 1834269 - 1834119
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta-agggactaaaattgtagttttcatacttagagg 127  Q
    |||||| ||| |||| ||||||||||||||||||||||| ||||| ||||||  | ||||||||||  ||| | |||||||||||||| |||| ||| ||    
T  1834269 ccaaatcagcattgatttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggg 1834170  T
Q  128 actaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
       ||||||| |||||||| ||| |||  ||||||||||||||||||||||    
T  1834169 gtcaaaattgtaagttttttaaagttagagggggaaaagtgcactttagcc 1834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 13386158 - 13386012
Alignment:
Q  36 agcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggacta-aaattgtagttttcatacttagaggactaaaa 134  Q
    |||||||||| |||||||||||| |||||||| ||||||||||| ||| |||||||||| |||   | ||||||| |||||  ||||||| || | ||||    
T  13386158 agcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatgaggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaa 13386059  T
Q  135 ttgaaag-tttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||| ||| ||||||||| |||  ||||||||||||||||||||||||    
T  13386058 ttgcaagttttttgaaagttagagggggaaaagtgcactttagccta 13386012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 46 - 178
Target Start/End: Complemental strand, 10447139 - 10447006
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    |||| ||||||  ||||||||| ||||| ||||||| | |||||||||| |||  ||||||||| |||||  ||| ||| || ||||||||| || ||||    
T  10447139 tggttaaaattagccaaaaggaccaaagatgcaaaggggctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttt 10447040  T
Q  146 tgaaacttaag-gggggaaaagtgcactttagcc 178  Q
    ||||||||||| ||||||||||||||||||||||    
T  10447039 tgaaacttaagagggggaaaagtgcactttagcc 10447006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 1963345 - 1963194
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| || ||||||| |||||||||||   ||||||| ||   |||||||| | |||| ||||| ||| ||||||||||||||||  ||| |||  |     
T  1963345 ccaaatcagtgttgactcggtcaaaattgctaaaaaggaccactattgcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggagg 1963246  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    | ||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  1963245 ccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagccta 1963194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 12129753 - 12129626
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||| ||||| || ||||| ||||||  | ||||||||||||||   ||||||||||||||  ||||||  || | ||||||| |||||||||    
T  12129753 gtcaaaattgatcaaaatgaccaaagatgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttg 12129654  T
Q  148 aaacttaaggggggaaaagtgcacttta 175  Q
    ||| ||||| ||||||||||||||||||    
T  12129653 aaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 5525508 - 5525359
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| ||||||||||||||||||||||  |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  ||||||| ||     
T  5525508 ccaaatcagcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttaggggg 5525409  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
      ||||||| |||||||||||| || ||||||||||| || ||||||||||    
T  5525408 tcaaaattgcaagtttttgaaagtt-aggggggaaaaatgtactttagcct 5525359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 13386484 - 13386646
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| ||||||||||||||||||||||  |||||||| ||||||||||| | | ||| |||||| |||    ||||||| |||||  ||||||  ||     
T  13386484 ccaaatcagcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctagatcttaggggggctaaattgtggttttggtacttatgggg 13386583  T
Q  129 ctaaaattgaaagtttttgaaacttaagggggg-aaaagtgcactttagcctatttaatatta 190  Q
      ||||||| |||||||||||| ||| |||||| |||||||||||||||||| |||| |||||    
T  13386584 tcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagcctttttactatta 13386646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 35934474 - 35934347
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    |||||||||||||||||||| || |||||||||| | | |||||||||||||| | |||||| || |||   ||||||| |||| ||||||  |||||||    
T  35934474 tggtcaaaattgaccaaaagaattaaagttgcaatggggctaaatcttaaggggccaaaattataatttctttacttaggggaccaaaattacaagtttt 35934375  T
Q  146 tgaaacttaaggggggaaaagtgcacttta 175  Q
    ||||| |||  |||||||||||||||||||    
T  35934374 tgaaagtta--gggggaaaagtgcacttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 5526085 - 5526228
Alignment:
Q  36 agcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaat 135  Q
    |||||||||| |||||||||||  |||||||| |||| |||||| | | |||||||||| |||    ||||||| |||||  ||||||| || | |||||    
T  5526085 agcgttgactaggtcaaaattggtcaaaaggaccaaaattgcaatggggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaat 5526184  T
Q  136 tgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    || |||||||||||| || || |||||||||||||||||||||||    
T  5526185 tgcaagtttttgaaagtt-agaggggaaaagtgcactttagccta 5526228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 10448229 - 10448363
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    |||||||||||| ||||||||| ||||| ||||||| | ||| ||||||  || | ||||||||||||||  ||| ||| || ||||||| | || ||||    
T  10448229 tggtcaaaattggccaaaaggaccaaagatgcaaaggggctatatcttagagggccaaaattgtagtttttgtacatagggggctaaaatcgcaactttt 10448328  T
Q  146 tgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||||| ||| ||  |||||||||||||||||    
T  10448329 tgaaacttaggggaggggaagtgcactttagccta 10448363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 37727837 - 37727759
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    ||||||| ||||||||||||||| |||| || ||||| | ||||||||||||||||||||||  |||||||||||||||    
T  37727837 gcgttgatttggtcaaaattgactaaaatgaccaaagatacaaagagactaaatcttaaggggttaaaattgtagtttt 37727759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 37728525 - 37728603
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||  ||||||||||| ||   ||||||||||||||    
T  37728525 gcgttgacttggtcaaaattgactaaaaggatcaaagatgcaaagaagctaaatcttaaagggtcaaaattgtagtttt 37728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 46638677 - 46638763
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    |||||| ||||||||||| ||||||||||| ||||| ||  |||||||||||| |||||||||||| ||| ||||||||||| ||||    
T  46638677 ccaaatcagcgttgactttgtcaaaattgatcaaaaagactaaagttgcaaagggactaaatcttagggggctaaaattgtaatttt 46638763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 1964393 - 1964542
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| ||||||||||||||||||||||   ||||||| ||   | |||||| |  ||| ||||||||||| ||||||||||||||  | | ||| ||     
T  1964393 ccaaatcagcgttgacttggtcaaaattgctaaaaaggaccactatcgcaaaggggataattcttaagggaccaaaattgtagtttttgttcataggggg 1964492  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    | ||||||| || ||||| ||| ||||||| |||||||||||||||||||    
T  1964493 ccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcc 1964542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 8155867 - 8155741
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga-ctaaaattgaaagttttt 146  Q
    |||||| |||||||||| ||  |||| ||||||| | |||||||||| ||| | ||||||||||||||   |||||| ||| ||||||||| ||||||||    
T  8155867 gtcaaagttgaccaaaatgactaaagatgcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagttttt 8155768  T
Q  147 gaaacttaaggggggaaaagtgcacttta 175  Q
    |||| |||  |||||||||||||||||||    
T  8155767 gaaagtta--gggggaaaagtgcacttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 55602457 - 55602379
Alignment:
Q  96 gggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    |||||||||||||||||||| |||  |||||||||||||||| |||||||||||| ||||  |||||||| |||||||||    
T  55602457 gggactaaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaa-aggggaaaaatgcacttta 55602379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 180
Target Start/End: Original strand, 26421597 - 26421724
Alignment:
Q  51 aaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttag-aggactaaaattgaaagtttttgaa 149  Q
    ||||||||| |||| ||||||| |||||| | | ||||||||||||||   ||||||||||||||  ||||||| ||| | ||||||| |||||||||||    
T  26421597 aaaattgactaaaatgatcaaatttgcaatggg-ctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtc-aaaattgcaagtttttgaa 26421694  T
Q  150 acttaaggggggaaaagtgcactttagccta 180  Q
    | ||| | |||||||||||||||||||||||    
T  26421695 agtta-gaggggaaaagtgcactttagccta 26421724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 50909642 - 50909774
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggact-aaaattgtagttttcatacttagaggact-aaaattgaaagttt 144  Q
    |||||||||||| |||||||| ||||| ||||||| | ||||||||||||||  | |||||||||||||| |||| ||| ||| | ||||| | || |||    
T  50909642 ggtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaatcttaagggggtcaaaattgtagtttttatacatag-ggagtcaaaatcgcaacttt 50909740  T
Q  145 ttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    || ||||||| || || |||||||||||||||||    
T  50909741 ttaaaacttagggtggaaaaagtgcactttagcc 50909774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 48780366 - 48780246
Alignment:
Q  60 caaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaagggg 159  Q
    |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  ||||||| ||   ||||||| |||||||| ||| ||| ||||    
T  48780366 caaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttaggggg 48780267  T
Q  160 ggaaaagtgcactttagccta 180  Q
    |||||||||||||||||||||    
T  48780266 ggaaaagtgcactttagccta 48780246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 17383068 - 17382990
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctat 181  Q
    ||||||||||||||  ||||||  |||| ||||||| |||||||||||| || ||||| |||||||||||||||||||||    
T  17383068 aaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcactttagcctat 17382990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 17388236 - 17388314
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctat 181  Q
    |||||||||||||   ||||||  |||| ||||||| |||||||||||| ||| ||||||||||||||||||||||||||    
T  17388236 aaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtta-ggggggaaaagtgcactttagcctat 17388314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 48781007 - 48781147
Alignment:
Q  38 cgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattg 137  Q
    |||||||| ||||||||||   ||||| || ||||||||||| | | |||||| ||| |||    ||||||| |||||  ||||||| |||| |||||||    
T  48781007 cgttgactaggtcaaaatttgtcaaaatgaccaaagttgcaatggggctaaattttaggggggctaaattgtggttttagtacttag-ggaccaaaattg 48781105  T
Q  138 aaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
     || ||||||||| |||  |||||||||||||||||||||||    
T  48781106 caaatttttgaaagttagagggggaaaagtgcactttagcct 48781147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 180
Target Start/End: Complemental strand, 49306911 - 49306773
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaa 139  Q
    ||||||| |||||||||||  ||||||| ||||| ||||||  ||||||||| ||  || | ||||||||||||||  |||||| | | | ||||||| |    
T  49306911 ttgactttgtcaaaattgataaaaaggaccaaagatgcaaaatgactaaatcatattgggc-aaaattgtagtttttgtacttaaatggccaaaattgca 49306813  T
Q  140 agtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||||||| ||  ||||  |||||||||||||||||||    
T  49306812 agtttttgaaagtt-gggggaaaaaagtgcactttagccta 49306773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 33296361 - 33296251
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattga 138  Q
    |||| ||||| |||||||||||||| |||||||| |||||| ||| ||||||  || ||||| |||||| ||||||| ||||||||  ||| ||||||      
T  33296361 ttgatttggttaaaattgaccaaaatgatcaaagatgcaaatgag-ctaaattataggggaccaaaattatagtttttatacttaggagaccaaaattat 33296263  T
Q  139 aagtttttgaaa 150  Q
    ||||||||||||    
T  33296262 aagtttttgaaa 33296251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 3928883 - 3928965
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctattta 184  Q
    |||||||| |||||||||| ||| || | ||||| | ||  |||||||| ||| |||||||||||||||||||||||| ||||    
T  3928883 aaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccttttta 3928965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 8896871 - 8896940
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaatt 107  Q
    ||||||||| |||||||||||||||||| | ||||  |||||||| | |||||||||||||||| ||||||    
T  8896871 gcgttgactcggtcaaaattgaccaaaaag-tcaatattgcaaaggggctaaatcttaagggaccaaaatt 8896940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 14868964 - 14868889
Alignment:
Q  103 aaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||||||| ||||| |||||||| || | ||||||| ||| ||||||||  || ||||||||||||||||||||||||    
T  14868964 aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcct 14868889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 14876970 - 14877045
Alignment:
Q  103 aaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||||||| ||||| |||||||| || | ||||||| ||| ||||||||  || ||||||||||||||||||||||||    
T  14876970 aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcct 14877045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 27257920 - 27257964
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaag 73  Q
    |||||||| |||||| |||||||||||||||||||||| ||||||    
T  27257920 ccaaataaacgttgatttggtcaaaattgaccaaaaggttcaaag 27257964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 2412890 - 2412957
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    |||||||||||| |||||||||||| |||||| |   ||||||||| | | |||||||||||||||||    
T  2412890 gtcaaaattgactaaaaggatcaaatttgcaatggagctaaatctttaagaactaaaattgtagtttt 2412957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 20919596 - 20919641
Alignment:
Q  142 tttttgaaacttaaggggggaaaagtgcactttagcctatttaata 187  Q
    ||||| |||||||||||| ||||| ||||||||||||| |||||||    
T  20919596 tttttaaaacttaaggggtgaaaaatgcactttagcctttttaata 20919641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 21178126 - 21177995
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||| | |||| |||||||||||||||  | |||||| ||| |||   ||||||||||||||  | | ||| |||  ||||||| || ||| ||    
T  21178126 gtcaaaattggcaaaaatgatcaaagttgcaaaagggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatg 21178027  T
Q  148 aaacttaaggggggaaaagtgcactttagccta 180  Q
    ||| || ||||||| ||||| ||||||||||||    
T  21178026 aaagtt-agggggggaaagtacactttagccta 21177995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 26420406 - 26420343
Alignment:
Q  86 taaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaa 150  Q
    ||||||| |||| ||||||||| || |||| |||||||| |||| ||||||| ||||||||||||    
T  26420406 taaatctaaaggaactaaaattataatttttatacttag-ggaccaaaattgcaagtttttgaaa 26420343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 5e-38; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 47 - 183
Target Start/End: Original strand, 38840463 - 38840599
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||| ||||||||| ||| |||||| | | |||||||||| ||| ||||||||||||||||  ||||||| || ||||||||| ||||||||    
T  38840463 ggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagttttt 38840562  T
Q  147 gaaacttaaggggggaaaagtgcactttagcctattt 183  Q
    |||| ||||||||||||||||||||||||||||||||    
T  38840563 gaaagttaaggggggaaaagtgcactttagcctattt 38840599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 18299511 - 18299373
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaa 139  Q
    |||||||||||||||||||||||||||||||||| ||||||  | ||||||| || ||| | |||||||||||||| ||||||||  | | |||||||||    
T  18299511 ttgacttggtcaaaattgaccaaaaggatcaaagatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaa 18299412  T
Q  140 agtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    ||||||||||| ||| ||| |||||||||||||||||||    
T  18299411 agtttttgaaagttacgggtggaaaagtgcactttagcc 18299373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 7899852 - 7899985
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||||||||| ||| |||||| ||| | | |||||||||| ||| |||||||||||||||   ||||||| |||| ||||||| ||||||||    
T  7899852 ggtcaaaattgaccaaaaagattaaagttacaatggggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagttttt 7899951  T
Q  147 gaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||| |||||||||||||||||||||||||||||    
T  7899952 gaaagttaaggggggaaaagtgcactttagccta 7899985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 11258769 - 11258913
Alignment:
Q  35 aagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaa 134  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||| | | |||||||||| ||||||||||||||||||||  ||||||| || | ||||    
T  11258769 aagcgttgactaggtcaaaattgaccaaaaggatcaaatctgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaa 11258868  T
Q  135 ttgaaagtttttgaaactta-aggggggaaaagtgcactttagcct 179  Q
    ||| |||||||||||| ||| || |||||||| |||||||||||||    
T  11258869 ttgcaagtttttgaaagttagagaggggaaaa-tgcactttagcct 11258913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 29 - 191
Target Start/End: Complemental strand, 18797396 - 18797233
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    ||||||||||||||||   |||||||||| | ||||||| ||||| ||||||| | |||||| ||| |||   |||||||||||||| |||||||  ||     
T  18797396 ccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggggtcaaaattgtagttttaatacttaagggg 18797297  T
Q  129 ctaaaattgaaagtttttgaaacttaagggg-ggaaaagtgcactttagcctatttaatattat 191  Q
      ||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  18797296 tcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttagcctatttaatattat 18797233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 36449909 - 36449775
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||  ||||||||||||| |||||||| | |||| ||||  |||   ||||||||||||||  ||||||| || | ||||||| ||||||||    
T  36449909 ggtcaaaattggtcaaaaggatcaaaattgcaaagggcctaattcttgggggggcaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 36449810  T
Q  147 gaaacttaaggggggaaaagtgcactttagcctat 181  Q
    |||| ||||||||||||||||||||||||||||||    
T  36449809 gaaagttaaggggggaaaagtgcactttagcctat 36449775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 7898823 - 7898686
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    ||||||||||||| ||||||||| ||| |||||| | | |||||||||| ||| | |||||||||||||  ||||||||  | | ||||||| |||||||    
T  7898823 tggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttt 7898724  T
Q  146 tgaaacttaaggggggaaaagtgcactttagcctattt 183  Q
    ||||| |||||||| ||||||||||||||| |||||||    
T  7898723 tgaaagttaaggggagaaaagtgcactttaacctattt 7898686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 38839373 - 38839240
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||||||||| ||| ||| |||||| | | |||||||||| ||| | ||||||||||||||  || |||| || ||||||||| ||||||||    
T  38839373 ggtcaaaattgaccaaaatgattaaaattgcaatggggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagttttt 38839274  T
Q  147 gaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||| ||||||||| |||| ||||||||||||||    
T  38839273 gaaaattaagggggaaaaaatgcactttagccta 38839240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 22848321 - 22848190
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||| |||||||| ||||| ||||||| | |||||||||| ||  | ||||||||||||||  || |||| |||| ||||||| |||||||||    
T  22848321 gtcaaaattgatcaaaaggaccaaagctgcaaaggggctaaatcttagggagccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttg 22848222  T
Q  148 aaacttaaggggggaaaagtgcactttagcct 179  Q
    ||| ||| ||||| ||||||||||||||||||    
T  22848221 aaagttaggggggtaaaagtgcactttagcct 22848190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 23869511 - 23869637
Alignment:
Q  53 aattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaact 152  Q
    |||||| |||||||||||||| ||||||| | |||||||||| ||  ||||||||||||||||  || |||| || | ||||||| |||||||| ||| |    
T  23869511 aattgaacaaaaggatcaaagatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagt 23869609  T
Q  153 taaggggggaaaagtgcactttagccta 180  Q
    |||||| |||||||||||||||||||||    
T  23869610 taagggtggaaaagtgcactttagccta 23869637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 179
Target Start/End: Complemental strand, 11257762 - 11257621
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||  ||||||||||| ||||||||||||| |||||| | | |||||||||| | | | |||||||||||||| |||||||| ||  |||||||    
T  11257762 gcgttgactatgtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggaggccaaaattgtagtttttatacttag-ggtttaaaatt 11257664  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    | |||||||||||| |||  || | ||||||||||||||||||    
T  11257663 gcaagtttttgaaagttagaggagtaaaagtgcactttagcct 11257621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 179
Target Start/End: Original strand, 13570529 - 13570659
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttga 148  Q
    ||||||||| | |||||||||||||||| |||| |||||| ||||  ||||| |||||| |||||||  ||||||  |||||||||||| ||||||||||    
T  13570529 tcaaaattggcaaaaaggatcaaagttgtaaagggactaattcttgggggaccaaaattatagtttttgtacttaagggactaaaattgcaagtttttga 13570628  T
Q  149 aacttaaggggggaaaagtgcactttagcct 179  Q
    || ||| |||  ||||| |||||||||||||    
T  13570629 aagttatgggtagaaaaatgcactttagcct 13570659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 180
Target Start/End: Complemental strand, 18904494 - 18904365
Alignment:
Q  51 aaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaa 150  Q
    ||||||| ||||||||| ||||| || |||| | |||| ||||| || || ||||||||||||||  ||||||  || | ||||||| | ||||||||||    
T  18904494 aaaattggccaaaaggaccaaagatgtaaaggggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaa 18904395  T
Q  151 cttaaggggggaaaagtgcactttagccta 180  Q
     |||||||||||||||||||||||||||||    
T  18904394 gttaaggggggaaaagtgcactttagccta 18904365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 18905959 - 18906090
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| ||||| || ||||| |||||| ||| |||||||||| ||| ||||||||||||||||  ||||||| || ||||||||| ||||||||    
T  18905959 gtcaaaattgatcaaaaagaccaaagatgcaaatgag-ctaaatcttagggg-ctaaaattgtagtttttgtacttagggggctaaaattgcaagttttt 18906056  T
Q  147 gaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||| |||   |||||||||||||||||||||||    
T  18906057 gaaagttagaaggggaaaagtgcactttagccta 18906090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 22587923 - 22588055
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    ||||| |||||| ||||||||| ||||| ||||||| | |||||||||||||| | ||||||||||||||  ||| ||| || | ||||||| |||||||    
T  22587923 tggtcgaaattggccaaaaggaccaaagatgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacatag-gggccaaaattgcaagtttt 22588021  T
Q  146 tgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||||| ||| | |||||||| |||||||||||||    
T  22588022 tgaaagttatgaggggaaaaatgcactttagcct 22588055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 36450892 - 36451023
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||| |||||||||||||| ||||||||   |||| ||||  ||| |  ||||||||||||   ||||||| |||| ||||||| |||||||||    
T  36450892 gtcaaaattggccaaaaggatcaaaattgcaaaggagctaattcttggggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagtttttg 36450991  T
Q  148 aaacttaaggggggaaaagtgcactttagccta 180  Q
    ||| |||| ||||||||||||||||||| ||||    
T  36450992 aaagttaa-gggggaaaagtgcactttaaccta 36451023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 41878225 - 41878092
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattg---aaagtt 143  Q
    |||||||||||||||||| ||| ||| |||||| | | |||||||||||||| | |||||||||||||   ||||||| || | |||||||   | ||||    
T  41878225 ggtcaaaattgaccaaaaagattaaaattgcaatggggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagtt 41878126  T
Q  144 tttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    ||||||| |||||||||| ||||||||||||||||    
T  41878125 tttgaaagttaagggggg-aaagtgcactttagcc 41878092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 11996856 - 11996770
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    |||||| |||||||||||||||||||||||||||||||| ||||| || |||| |  |||||||||  | |||||||||||||||||    
T  11996856 ccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgtaaaggggttaaatcttagagaactaaaattgtagtttt 11996770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 41879181 - 41879315
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    ||||||||||||| ||||| ||| ||| |||||| |   |||||| ||| |||  ||||||||||||||   ||||||| || | ||||||| |||||||    
T  41879181 tggtcaaaattgatcaaaatgattaaaattgcaatggtgctaaattttagggggttaaaattgtagtttatgtacttagggggccaaaattgcaagtttt 41879280  T
Q  146 tgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||| ||||||||| ||||||| |||||||||||    
T  41879281 tgaaaattaagggggaaaaagtgtactttagccta 41879315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 24475362 - 24475224
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattga 138  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||| ||||||  || ||| | |||||||||||||| |||||||| || | ||||||      
T  24475362 ttgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgag-ctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattac 24475264  T
Q  139 aagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||||||||||| || ||||| |  ||| ||||||||||||    
T  24475263 aagtttttgaaagtt-aggggagggaagcgcactttagcct 24475224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 175
Target Start/End: Complemental strand, 26544289 - 26544152
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||||||||||||||| |||||||| ||||  |||||||   |||||||||| | | |||||| |||||||||  ||||||| | || ||||||    
T  26544289 gcgttgacttggtcaaaattgatcaaaaggaccaaatatgcaaaggtgctaaatcttaggaggctaaaactgtagtttttgtacttag-gaaccaaaatt 26544191  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    | || ||||| ||| ||| |||  |||||||||||||||    
T  26544190 gtaaatttttaaaaattaggggtagaaaagtgcacttta 26544152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 1034422 - 1034570
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| || ||||||| |||||||| ||  |||||||| |||||||||||   | |||||||||| |||    ||||||| |||||  ||| ||| ||     
T  1034422 ccaaatcagagttgactaggtcaaaagtggtcaaaaggaccaaagttgcaattgg-ctaaatcttaggggggctaaattgtggttttggtacgtaggggg 1034520  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    | ||||||| | |||||||||| |||||||||||||||||||||||||||    
T  1034521 ccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 22587632 - 22587563
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    |||||||||||| ||||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||||    
T  22587632 tggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaatcttagggggccaaaattgtagtttt 22587563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 8534711 - 8534586
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||||| ||||||  |   |||||||||| |||| ||||  ||||| |||||||||||||  ||||||| ||||  ||||||| |||||||||    
T  8534711 gtcaaaattgacctaaaggactactattgcaaagaggctaattcttg-gggaccaaaattgtagtttctatacttaaaggatcaaaattgtaagtttttg 8534613  T
Q  148 aaacttaaggggggaaaagtgcacttta 175  Q
    ||| |||| |||||||||| ||||||||    
T  8534612 aaaattaa-gggggaaaagagcacttta 8534586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 13030419 - 13030293
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagaga-ctaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||||||||| || ||||| |||||| ||| |||||||||| ||| | ||||||||| ||||  ||||||| || | ||||||  ||||||||    
T  13030419 gtcaaaattgaccaaaatgaccaaagatgcaaa-agagctaaatcttagggggcaaaaattgtaatttttgtacttaggggcc-aaaattacaagttttt 13030322  T
Q  147 gaaacttaaggggggaaaagtgcactttagc 177  Q
    |||| |||  |||||||||||||||||||||    
T  13030321 gaaagtta--gggggaaaagtgcactttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 22067753 - 22067820
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    |||||||||||||||||||||||||||||| |||||  |||||  || ||| ||||||||||||||||    
T  22067753 gtcaaaattgaccaaaaggatcaaagttgcgaagagggtaaattatagggggctaaaattgtagtttt 22067820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 18300688 - 18300822
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaa 139  Q
    |||||||| ||||||||| ||||||||| ||||| ||||||| | ||||||  || ||| | ||||||||||||||  ||||||| ||   ||||||| |    
T  18300688 ttgacttgatcaaaattgtccaaaaggaccaaagatgcaaaggggctaaattataggggtc-aaaattgtagtttttgtacttagggggtcaaaattgca 18300786  T
Q  140 agtttttgaaacttaaggggggaaaagtgcactttagc 177  Q
    ||||| ||||| |||  |||||||||||||| ||||||    
T  18300787 agtttatgaaagtta--gggggaaaagtgcaatttagc 18300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 179
Target Start/End: Original strand, 802563 - 802692
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta-agggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||| |||||| ||||  ||||||| |   |||||||| |||| | ||||||||||||||  |||  || || | ||||||| |||||||||    
T  802563 tcaaaattgacctaaaggaccaaatatgcaaaggggtaaaatcttagagggtc-aaaattgtagtttttgtacacagggggccaaaattgcaagtttttg 802661  T
Q  148 aaacttaaggggggaaaagtgcactttagcct 179  Q
    |||||| ||||||||||||| |||||||||||    
T  802662 aaactt-aggggggaaaagtacactttagcct 802692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 11938829 - 11938891
Alignment:
Q  118 tacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||||||  ||| ||||||| |||||||||||| ||| ||| |||||||||||||||||||||    
T  11938829 tacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagccta 11938891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 1410130 - 1410069
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgt 109  Q
    |||||| ||||| |||||||| ||||||||||| || |||||||||| ||||| ||||||||    
T  1410130 gtcaaagttgacaaaaaggattaaagttgcaaataggctaaatcttaggggaccaaaattgt 1410069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 32739782 - 32739714
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    ||||||||||| ||||| ||| ||||| || |||  |||||||||||||||| | ||||||||||||||    
T  32739782 ggtcaaaattggccaaatggaccaaagatggaaaatgactaaatcttaaggggccaaaattgtagtttt 32739714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 27552591 - 27552525
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaa 104  Q
    |||||||||||||||||||||||||||||| ||||  |||||||| |  ||||||||| ||| |||||    
T  27552591 gcgttgacttggtcaaaattgaccaaaagg-tcaatattgcaaaggggttaaatcttagggggctaaa 27552525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 16446202 - 16446152
Alignment:
Q  130 taaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||||||| |||||||||||| |||||||  ||||| ||||||||||||||    
T  16446202 taaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagccta 16446152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 18869000 - 18868922
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||||||||||  || ||||  | | ||||||| |||||||||||| ||| ||| |||||||| ||||||||||||    
T  18869000 aaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagccta 18868922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 13568048 - 13567975
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    ||||||||||||||  || |||| || | ||||||| ||||||||||||||||   |||||||||| |||||||    
T  13568048 aaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 26545481 - 26545538
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta 94  Q
    ||||||| |||||||||||||| ||||| || ||||| ||||||| | ||||||||||    
T  26545481 gcgttgatttggtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatctta 26545538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 137
Target Start/End: Complemental strand, 1091824 - 1091736
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattg 137  Q
    ||||||||||| |||| || ||   ||||||| || ||||||||||||||   |||||||||| ||| |||| |||||||| |||||||    
T  1091824 tcaaaattgacaaaaatgaccactattgcaaataggctaaatcttaaggggtcaaaattgtagcttttatacatagaggaccaaaattg 1091736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 7e-37; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 6842236 - 6842386
Alignment:
Q  30 caaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggac 129  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||| |||||| ||||||||| |||||| |||||||||||||||||   || ||| || |    
T  6842236 caaatcagctttgacttggtcaaaattggccaaaaggatcaaagatgcaaacagactaaattttaaggaactaaaattgtagtttttgcacatagggggc 6842335  T
Q  130 taaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
     ||||||| || |||||||||||||  ||||||||||||||||||||||||    
T  6842336 caaaattgcaactttttgaaacttagagggggaaaagtgcactttagccta 6842386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 7316265 - 7316400
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||| || || ||||||| | |||||||||||||| | |||||||| ||||  ||| |||| || | ||||||| |||||||||    
T  7316265 gtcaaaattgaccaaaaggaccatagatgcaaaggggctaaatcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgcaagtttttg 7316364  T
Q  148 aaacttaaggggggaaaagtgcactttagcctattt 183  Q
    ||| ||||||||||||||||||||||||||||||||    
T  7316365 aaagttaaggggggaaaagtgcactttagcctattt 7316400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 16704469 - 16704600
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttga 148  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||| |||  ||||||||||||||  ||||||| ||   ||||||| ||||||||||    
T  16704469 tcaaaattgacaaaaaggatcatagttgcaaagaggctaaatcttaaaggatcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttga 16704568  T
Q  149 aacttaaggggggaaaagtgcactttagccta 180  Q
    || ||||||| |||||||||||||||||||||    
T  16704569 aagttaagggaggaaaagtgcactttagccta 16704600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 45 - 175
Target Start/End: Complemental strand, 5658889 - 5658759
Alignment:
Q  45 ttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttt 144  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||||||  ||||||||||||||  ||| ||| | |||||||||  || |||    
T  5658889 ttggtcaaaattgaccaaaaggatcaaagttgcaaatgggctaaatcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataacttt 5658790  T
Q  145 ttgaaacttaaggggggaaaagtgcacttta 175  Q
    || |||||||||||||||||| |||||||||    
T  5658789 ttaaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 10784710 - 10784587
Alignment:
Q  61 aaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggg-g 159  Q
    ||||||||||||||||||||| | |||||||||  ||| | |||||||||||||| |||||||| ||  |||||||| |||||||| ||| ||||||| |    
T  10784710 aaaaggatcaaagttgcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggag 10784611  T
Q  160 ggaaaagtgcactttagcctattt 183  Q
    ||||||||||||||||||||||||    
T  10784610 ggaaaagtgcactttagcctattt 10784587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 14822491 - 14822358
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||| ||  |||||||| |||||||||| |||||||||||||| ||| | |||||||||||||  |||||||  || | ||||||| ||||||||    
T  14822491 ggtcaaaatagattaaaaggattaaagttgcaatgagactaaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagttttt 14822392  T
Q  147 gaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||| |||||||| |||||||||||| |||||||    
T  14822391 gaaaattaaggggtgaaaagtgcactctagccta 14822358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 27437977 - 27437824
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||| ||||||||||||| ||||||||| |||||||||||||   |||||||||| |||   |||||||||||||| ||   ||| ||     
T  27437977 ccaaatcagcgttgatttggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttataggggg 27437878  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatt 182  Q
    | ||||||| || ||||| ||| |||||||| ||||||||||||||||||||||    
T  27437877 ccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcctatt 27437824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 8659407 - 8659263
Alignment:
Q  36 agcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaat 135  Q
    |||||||||| |||||||||||  |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  ||||||| || | |||||    
T  8659407 agcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaat 8659308  T
Q  136 tgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    || |||||||||||| |||  ||||||||||||||||||||||||    
T  8659307 tgcaagtttttgaaagttagagggggaaaagtgcactttagccta 8659263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 8660158 - 8660305
Alignment:
Q  31 aaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggact 130  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||||| |   |||||||||| |||    ||||||| |||||  ||||||| || |     
T  8660158 aaatcagcgttgacttggtcaaaattggtcaaaaggatcaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttaggggtc- 8660256  T
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||||||| |||||||||||| ||| | ||||||||||||||||||||||    
T  8660257 aaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcct 8660305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 181
Target Start/End: Original strand, 34834531 - 34834683
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||| |||||||||||  |||||||| ||||||||||| | | |||||||||| |||    ||||||| ||||| ||||||||  ||    
T  34834531 ccaaatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggaga 34834630  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctat 181  Q
      ||||||| |||||||||||| ||| || ||||||||||||||||| |||||    
T  34834631 tcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttaacctat 34834683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 7315009 - 7314880
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||||||||| || ||||| ||||||| | |||||||||| |||   |||||||| ||||| |||||||| || | ||||||| |||||||||    
T  7315009 gtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggtcaaaattgttgttttgatacttag-gggccaaaattgcaagtttttg 7314911  T
Q  148 aaacttaaggggggaaaagtgcactttagcc 178  Q
    ||| |||  ||||||||||||||||||||||    
T  7314910 aaagttagagggggaaaagtgcactttagcc 7314880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 26574749 - 26574617
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||||| |||| |||||||||||||||| | ||||||||||||||| | ||| |||||||||  ||||||||||   ||||||| ||||||||    
T  26574749 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaaggga-tcaaaatgtagtttttgtacttagaggttcaaaattgcaagttttt 26574651  T
Q  147 gaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||| |||  || || ||| ||||||||||||||    
T  26574650 gaaagttagaggtgggaaattgcactttagccta 26574617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 1829573 - 1829701
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||||||||| || ||||| ||||||| | |||||||||| ||| | |||||||||||||| |||||||| ||   ||||||| ||||||||    
T  1829573 ggtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagttttt 1829672  T
Q  147 gaaacttaaggggggaaaagtgcacttta 175  Q
     ||| ||| ||||  ||||||||||||||    
T  1829673 aaaagttagggggaaaaaagtgcacttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 36 - 179
Target Start/End: Complemental strand, 3721754 - 3721611
Alignment:
Q  36 agcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaat 135  Q
    |||||||||| |||||||||||  |||||||| ||||||||||| | | ||||||||||||||    ||||| | |||||  ||||||| ||   |||||    
T  3721754 agcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaat 3721655  T
Q  136 tgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    || |||||||||||| |||  |||||||||||||||||||||||    
T  3721654 tgcaagtttttgaaagttagagggggaaaagtgcactttagcct 3721611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 14823545 - 14823688
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||||||||||| || || ||||||| |   |||||||||| ||| | |||||||||||||   ||||||  || ||||||||| ||||||||    
T  14823545 ggtcaaaattgaccaaaagaattaaggttgcaacggttctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttt 14823644  T
Q  147 gaaacttaaggggg-gaaaagtgcactttagcctatttaatatt 189  Q
     ||| |||||||||  |||||||||||||||||||||| |||||    
T  14823645 taaaattaagggggaaaaaagtgcactttagcctattttatatt 14823688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 10785884 - 10786000
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||   ||||||||||||||||||||| | ||||||||||||||  |||||||||||||||  ||||||| ||  |||||||| || |||||     
T  10785884 gtcaaaattggtaaaaaggatcaaagttgcaaaggggctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaattgcaaattttta 10785983  T
Q  148 aaacttaaggggggaaaa 165  Q
    ||| || |||||||||||    
T  10785984 aaagtt-aggggggaaaa 10786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 17496928 - 17496791
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta-agggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| |||||||| ||||| |||||||||  |||||||||  ||| | ||||||| ||||||  ||||||||||  |||||||| ||||||||    
T  17496928 gtcaaaattgatcaaaaggaccaaagatgcaaagaggttaaatcttaggggggccaaaattgcagtttttgtacttagagggttaaaattgtaagttttt 17496829  T
Q  147 gaaacttaag----gggggaaaagtgcactttagccta 180  Q
    |||| ||| |    ||||||||| ||||||||||||||    
T  17496828 gaaagttagggggagggggaaaaatgcactttagccta 17496791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 26717065 - 26717134
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgc-aaagagactaaatcttaaggg 98  Q
    |||| ||||| ||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  26717065 ccaattaagcattgacttggtcaaaattgatcaaaaggatcaaagttgcaaaagag-ctaaatcttaaggg 26717134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 8821991 - 8821871
Alignment:
Q  60 caaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaagggg 159  Q
    |||||||| ||||||||||| |   |||||||||| |||    ||||||| |||||  ||||||| || | ||||||| |||||||||||| |||  |||    
T  8821991 caaaaggaccaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagaggg 8821892  T
Q  160 ggaaaagtgcactttagccta 180  Q
    |||||||||||||||||||||    
T  8821891 ggaaaagtgcactttagccta 8821871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 27447967 - 27448019
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctattt 183  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||||||    
T  27447967 aaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcctattt 27448019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 26575024 - 26575127
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| | |||||||||||||||||||||    ||||||||| ||| | ||||||||||||||  ||||||  ||  |||||||| ||||||||    
T  26575024 ggtcaaaattggcaaaaaggatcaaagttgcaaaggagttaaatcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagttttt 26575123  T
Q  147 gaaa 150  Q
    ||||    
T  26575124 gaaa 26575127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 3722533 - 3722610
Alignment:
Q  103 aaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||| |||||  ||||||||||   ||||||| |||||||||||| ||| || ||||||||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagccta 3722610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 26717138 - 26717183
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttag 176  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||    
T  26717138 aaaattgcaagtttctgaaacttaaggggggaaaagtgcactttag 26717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 3333005 - 3333128
Alignment:
Q  56 tgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaa 155  Q
    |||| ||||||||||||||||||||| | |||||| |||  ||  |||||||||||||||  ||| ||| || | ||||| | || ||||| |||||||     
T  3333005 tgactaaaaggatcaaagttgcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttag 3333104  T
Q  156 ggggggaaaagtgcactttagcct 179  Q
      ||||||||||||| ||||||||    
T  3333105 aaggggaaaagtgcaatttagcct 3333128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 3722475 - 3722525
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaa 79  Q
    |||||| ||||||||||||||||||||||  |||||||| |||||||||||    
T  3722475 ccaaatcagcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaa 3722525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 8822776 - 8822894
Alignment:
Q  60 caaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaagggg 159  Q
    |||||||| |||||||||||   | |||||||||| |||    ||||||| |||||  ||||||| ||   ||||||| |||||||||||| |||| | |    
T  8822776 caaaaggaccaaagttgcaattgggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagag 8822875  T
Q  160 ggaaaagtgcactttagcc 178  Q
    |||||||||||||||||||    
T  8822876 ggaaaagtgcactttagcc 8822894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 3333496 - 3333563
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    |||||||||| ||||||||||||||||||| ||| | ||||||| ||  ||  |||||||||||||||    
T  3333496 gtcaaaattggccaaaaggatcaaagttgcgaaggggctaaatcatagagggttaaaattgtagtttt 3333563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 22418858 - 22418912
Alignment:
Q  39 gttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta 94  Q
    |||||||||||||||||||||||||||| ||| | |||||||| | ||||||||||    
T  22418858 gttgacttggtcaaaattgaccaaaagg-tcacaattgcaaaggggctaaatctta 22418912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 27322093 - 27322171
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctat 181  Q
    |||||||| |||||  ||||||| || | ||||||| ||| ||||||||  || ||||||||||||||||||||||||||    
T  27322093 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcctat 27322171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 20973367 - 20973401
Alignment:
Q  145 ttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||||||||||| |||||||||||||||||||||||    
T  20973367 ttgaaacttaaagggggaaaagtgcactttagcct 20973401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 29473124 - 29473082
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactt 173  Q
    ||||||| || ||||| ||||||||||||||||||||||||||    
T  29473124 aaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 22968422 - 22968459
Alignment:
Q  143 ttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  22968422 ttttgaaacttaaggggcgaaaagtgaactttagccta 22968459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 23819971 - 23819934
Alignment:
Q  143 ttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  23819971 ttttgaaacttaaggggcgaaaagtgaactttagccta 23819934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 27443797 - 27443748
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||| || ||||||||||||||||||| |||| ||||||| ||||||    
T  27443797 aaaattgcaactttttgaaacttaagggggaaaaactgcacttaagccta 27443748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 12382663 - 12382811
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    ||||||||||||||||   |||||||||  | ||||||| ||||| ||||||  |  ||||||||  ||||  |||||| ||||||| |||||||| ||     
T  12382663 ccaaataagcgttgaccaagtcaaaattagctaaaaggaccaaagatgcaaaagggttaaatctttggggatcaaaattatagttttaatacttaggggg 12382762  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagc 177  Q
      ||||||  || ||||| ||| |||  || ||||||||||||||||||    
T  12382763 tcaaaattacaaatttttaaaaattagaggtggaaaagtgcactttagc 12382811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 49 - 180
Target Start/End: Complemental strand, 25523198 - 25523067
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttga 148  Q
    |||||||||| |||||||||||||| ||||||| | |||||||||| |||   ||||||||||||||  ||||||| || ||||||||| ||||||||||    
T  25523198 tcaaaattgatcaaaaggatcaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttga 25523099  T
Q  149 aacttaaggggggaaaagtgcactttagccta 180  Q
    || |||||||||||||||||||||||||||||    
T  25523098 aagttaaggggggaaaagtgcactttagccta 25523067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 47 - 184
Target Start/End: Original strand, 33160257 - 33160393
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| | |||||||| |||||||||| | | ||||||||||||||   |||||||||||||  |||||||| || ||||||||| ||||||||    
T  33160257 ggtcaaaattggctaaaaggattaaagttgcaatggg-ctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagttttt 33160355  T
Q  147 gaaacttaaggggggaaaagtgcactttagcctattta 184  Q
    |||| |||||||||||||||||||||||||||||||||    
T  33160356 gaaaattaaggggggaaaagtgcactttagcctattta 33160393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 16650815 - 16650958
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||  | ||||| |||| ||| |||||||||||||||| |||||||| ||   ||||||    
T  16650815 gcgttgacttgatcaaaattgaccaaaaggaccaaagatgcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaatt 16650914  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    | |||||||| ||| ||||||| |||||||||||||||||||||    
T  16650915 gcaagtttttaaaagttaagggtggaaaagtgcactttagccta 16650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 37 - 178
Target Start/End: Original strand, 22940583 - 22940723
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||||||||||||||||||||||||| |||| || |||| | |||||| ||| ||| | ||||||||| ||||  ||||||| || | ||||||    
T  22940583 gcgttgacttggtcaaaattgaccaaaaggataaaagatgaaaaggggctaaattttaggggtc-aaaattgtaatttttgtacttagggggccaaaatt 22940681  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    | |||||||||||| |||||||||||||||||||||||||||    
T  22940682 gcaagtttttgaaagttaaggggggaaaagtgcactttagcc 22940723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 28538807 - 28538674
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||||| ||| ||||||||||||||||  ||||||  ||   ||||||| ||||||||    
T  28538807 ggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagttttt 28538708  T
Q  147 gaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||| ||| ||| |||||||||||||||||||||    
T  28538707 gaaagttacgggtggaaaagtgcactttagccta 28538674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 18486873 - 18487005
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||| ||||| ||||||| | |||||||||| ||| | |||||||| ||||  |||||||| || | ||||||| |||||||||    
T  18486873 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagggggccaaaattgcaagtttttg 18486972  T
Q  148 aaacttaaggggggaaaagtgcactttagccta 180  Q
    ||| |||||||||| ||||||||||||||||||    
T  18486973 aaagttaagggggggaaagtgcactttagccta 18487005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 36486458 - 36486590
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||  ||||||| ||   ||||||| ||||||||    
T  36486458 ggtcaaaattgacaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 36486557  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
     ||| ||| ||||| |||||||||||| |||||    
T  36486558 aaaagttaggggggaaaaagtgcacttcagcct 36486590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 28539790 - 28539917
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||  ||||||||||   ||||||| ||||||||    
T  28539790 ggtcaaaattggcaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagttttt 28539889  T
Q  147 gaaacttaaggggggaaaagtgcacttta 175  Q
     ||| || ||||||||||| |||||||||    
T  28539890 aaaagtt-aggggggaaaaatgcacttta 28539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 181
Target Start/End: Original strand, 42196152 - 42196304
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||||||||||||||||||||||||| ||||| ||||||  | |||||||||| |||||||||| |||||||||  ||| ||||||     
T  42196152 ccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggactaaaaatgtagtttttgtacatagaggg 42196251  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctat 181  Q
    | ||| |   || ||||| ||| ||| |||||| |||||||||||||||||||    
T  42196252 ccaaattcacaactttttaaaagttaggggggggaaagtgcactttagcctat 42196304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 19753041 - 19752902
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||| ||||| ||||| | | ||||||| || ||| | ||||||||||||||  ||||||| || | ||||||| |||||||||    
T  19753041 gtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttg 19752942  T
Q  148 aaacttaaggggggaaaagtgcactttagcctatttaatat 188  Q
    ||| || ||||||||||||||||||||||||| ||| ||||    
T  19752941 aaagtt-aggggggaaaagtgcactttagcctttttgatat 19752902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 42195281 - 42195137
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||||||||||||||||||||||||| ||||| ||||||| | |||||||||| ||||| |||||||||| |||  ||| ||| ||     
T  42195281 ccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtagattttgtacataggggg 42195182  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    | ||||| | || ||||| ||| |||| |||||||||||||||||||    
T  42195181 ccaaaatcgcaacttttt-aaagttaa-gggggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 5778795 - 5778939
Alignment:
Q  36 agcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaat 135  Q
    |||||||||| |||||||||||  |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  ||||||| || | |||||    
T  5778795 agcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaat 5778894  T
Q  136 tgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    || |||||||||||| |||  ||||||||||||||||||||||||    
T  5778895 tgcaagtttttgaaagttagagggggaaaagtgcactttagccta 5778939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 2186908 - 2186774
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaa 139  Q
    ||||| |||||||||||||||||||||| ||||| || |||  | |||||||||| |||| |||||||||||||||  ||| |||| ||| ||||||| |    
T  2186908 ttgacctggtcaaaattgaccaaaaggaccaaagatgtaaaatggctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgca 2186809  T
Q  140 agtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    | |||||||||||| |||||| |||| |||||||||    
T  2186808 actttttgaaactt-agggggaaaaaatgcacttta 2186774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 24333045 - 24332916
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta-agggactaaaattgtagttttcatacttagaggactaaaattgaaagttt 144  Q
    |||||||||||||||||||||| ||||| ||||||| |  ||||||||| |||| | ||||||||||||||  ||| ||  || | ||||||| ||||||    
T  24333045 tggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtc-aaaattgtagtttttgtacataaggggccaaaattgcaagttt 24332947  T
Q  145 ttgaaacttaaggggggaaaagtgcacttta 175  Q
    |||||||||||||||| ||||||||||||||    
T  24332946 ttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 25055561 - 25055409
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| ||| |||||||| |||||||||| |||||||| ||||| ||||||  | |||||||||| ||| | |||||||||||||| |||| ||| |||    
T  25055561 ccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacatagggga 25055462  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctat 181  Q
      ||||||| |||   || ||| |||  |||||||||||||||||||||||||    
T  25055461 tcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttagcctat 25055409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 18154641 - 18154490
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||||||| |||| ||||| |||||||| ||||| ||||||| |||||| |   |||||| |||  || | ||||||||||||||  ||||||| ||     
T  18154641 ccaaataagctttgatttggttaaaattgagcaaaatgatcaaatttgcaatggagctaaattttagagggc-aaaattgtagtttttgtacttaggggt 18154543  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatt 182  Q
    | ||||||| |||||||||||| ||||||||  |||||| ||||||||||||||    
T  18154542 c-aaaattgtaagtttttgaaagttaaggggaaaaaagttcactttagcctatt 18154490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 25056332 - 25056482
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagttttcatacttagagg 127  Q
    ||||||||||||||||   |||||||||| | ||||  | ||||| || ||| ||| |||||||||| |||   |||||||||||||| |||||||| ||    
T  25056332 ccaaataagcgttgaccaagtcaaaattggctaaaacaaccaaagatgtaaatgaggctaaatcttagggggtcaaaattgtagttttaatacttagggg 25056431  T
Q  128 actaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
       ||||||| |||||||||||| ||| | | |||||||||||||||||||    
T  25056432 gtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagcc 25056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 36485431 - 36485302
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatactt-agaggactaaaattgaaagtttt 145  Q
    ||||||||||||| |||| |||||||||||||||| |  ||||||||| ||| | |||||| |||||||  ||||| ||||| | ||||||| |||||||    
T  36485431 ggtcaaaattgacaaaaatgatcaaagttgcaaaggggttaaatcttagggggccaaaattatagtttttgtacttaagaggtc-aaaattgtaagtttt 36485333  T
Q  146 tgaaacttaaggggggaaaagtgcactttag 176  Q
    | ||| ||| ||| |||||| ||||||||||    
T  36485332 ttaaagttaggggtggaaaaatgcactttag 36485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 40255642 - 40255776
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||| ||||| ||| ||| |||||| | |  ||||||||| ||| | |||||||||||||   || |||| ||   ||||||| ||||||||    
T  40255642 ggtcaaaattgatcaaaaagattaaaattgcaatggggttaaatcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagttttt 40255741  T
Q  147 gaaacttaaggggggaaaagtgcactttagcctat 181  Q
     ||| ||||| ||||||||||||||||||||||||    
T  40255742 aaaaattaagaggggaaaagtgcactttagcctat 40255776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 1797267 - 1797335
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    ||||||||||||  ||| | ||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  1797267 ggtcaaaattgaaaaaaggaatcaaagttgcaaaggggctaaatcttaagggaccaaaattgtagtttt 1797335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 18485275 - 18485137
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaa-------ttgtagttttcatacttagaggactaaaattgaaa 140  Q
    ||||||||| |||||||||||||||| ||||||| | |||||||||| ||| | ||||       |||| ||||| |||||||| || | ||||||| ||    
T  18485275 gtcaaaattaaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaacccaaaattgttgttttgatacttagggggccaaaattgcaa 18485176  T
Q  141 gtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||||| ||| |||  |||| ||||||||||||||||||    
T  18485175 gttttttaaagttagaggggaaaaagtgcactttagcct 18485137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 20214271 - 20214196
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    ||||||||||||||  ||| |||||  ||||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  20214271 aaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaa-gggggaaaagtgcactttagcc 20214196  T

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Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 20216815 - 20216866
Alignment:
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  20216815 ctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttaaccta 20216866  T

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Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 19754101 - 19754235
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||  |||||||| ||||| ||||| | | ||||||| || ||| | ||||||||||||||  || |||| || | ||||||| |||||||||    
T  19754101 gtcaaaattgttcaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttg 19754200  T
Q  148 aaacttaaggggg-gaaaagtgcactttagcctat 181  Q
    ||| ||| |||||  |||| |||||||||||||||    
T  19754201 aaagttaggggggaaaaaaatgcactttagcctat 19754235  T

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Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 5730814 - 5730934
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta-agggactaaaattgtagttttcatacttagagg 127  Q
    |||||| |||||||||| |||||||||||| |||||| | ||||||||||| | |  |||||||||  |||||| ||||||| |||||  ||||||| ||    
T  5730814 ccaaatcagcgttgactaggtcaaaattgatcaaaagaaccaaagttgcaatggggttaaatcttagggggact-aaattgtggttttggtacttagggg 5730912  T
Q  128 actaaaattgaaagtttttgaa 149  Q
     | ||||||| |||||||||||    
T  5730913 gccaaaattggaagtttttgaa 5730934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 16650130 - 16650046
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta-agggactaaaattgtagttttcatacttag 124  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |  ||||||||| |||| | ||||||||||||||  |||||||    
T  16650130 ttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtc-aaaattgtagtttttgtacttag 16650046  T

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Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 5730489 - 5730439
Alignment:
Q  131 aaaattgaaagtttttgaaacttaagggggg-aaaagtgcactttagccta 180  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  5730489 aaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagccta 5730439  T

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Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 36221147 - 36221077
Alignment:
Q  24 aagttccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta 94  Q
    |||| ||| ||||||||||||| |||||||||||| ||||| ||| ||| |||||| ||| ||||||||||    
T  36221147 aagtgccacataagcgttgactcggtcaaaattgatcaaaatgatgaaatttgcaatgaggctaaatctta 36221077  T

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Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 2686372 - 2686501
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||| |||||||| ||||| ||||| ||| ||||||| || ||||| |||||| |||||||  ||||||   ||  ||||||| ||||||||     
T  2686372 gtcaaaattgatcaaaaggaccaaagatgcaatgaggctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaagttttta 2686471  T
Q  148 aaactta-agg-ggggaaaagtgcacttta 175  Q
    ||| ||| ||| |||| |||||||||||||    
T  2686472 aaagttagaggagggggaaagtgcacttta 2686501  T

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Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 5778017 - 5777899
Alignment:
Q  60 caaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaagggg 159  Q
    |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  ||||||| ||   ||||||| |||||||||||| ||| ||||    
T  5778017 caaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaggggg 5777918  T
Q  160 ggaaaagtgcactttagccta 180  Q
    |  ||||||||||||||||||    
T  5777917 g--aaagtgcactttagccta 5777899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 38476745 - 38476783
Alignment:
Q  142 tttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  38476745 tttttaaaacttaaggggtgaaaagtgcactttagccta 38476783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 25524152 - 25524233
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaagggg-ggaaaagtgcactttagcctatt 182  Q
    ||||||||||||||  ||||||| || | ||||||  || ||||| ||| ||| |||| |||||||||||||||||||||||    
T  25524152 aaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcctatt 25524233  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 31576627 - 31576664
Alignment:
Q  142 tttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  31576627 tttttaaaacttaaggggtgaaaagtgcactttagcct 31576664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 1796130 - 1796054
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    ||||||||||||||  |||||||  | | ||| ||| |||||||||||| ||| ||| |||||| ||||||||||||    
T  1796130 aaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagcc 1796054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 7311683 - 7311579
Alignment:
Q  85 ctaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctattta 184  Q
    |||||||||| ||| ||||||||||||||||  ||||| |  | | || |||| |||||||||||| ||| ||||||    |||||||||||||||  ||    
T  7311683 ctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggggggggggggtgcactttagcctaaata 7311584  T
Q  185 atatt 189  Q
    |||||    
T  7311583 atatt 7311579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 25524069 - 25524145
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttag 124  Q
    ||||||||||||||||||||  |||| ||||||| | |||||||||| |||   |||||| |||||||  |||||||    
T  25524069 gtcaaaattgaccaaaaggactaaagatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttag 25524145  T

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Target: chr8 (Bit Score: 74; Significance: 7e-34; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 10007734 - 10007867
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||| ||||||| ||||| ||||||| | |||||||||| ||||| |||||||| ||||  |||||||| || | ||||||| |||||||||    
T  10007734 gtcaaaattgacgaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtggtttctatacttagggggccaaaattgcaagtttttg 10007833  T
Q  148 aaacttaaggggggaaaagtgcactttagcctat 181  Q
    ||| ||||||||||||||||||||||||||||||    
T  10007834 aaagttaaggggggaaaagtgcactttagcctat 10007867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 10006474 - 10006339
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||| ||||| ||||||| | |||||||||| ||| | |||||||| ||||| |||||||| || | ||||||| |||||||||    
T  10006474 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttg 10006375  T
Q  148 aaacttaaggggggaaaagtgcactttagcctattt 183  Q
    ||| |||  |||||||||||||||||||||| ||||    
T  10006374 aaagttagagggggaaaagtgcactttagccaattt 10006339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 18979091 - 18979226
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||| | ||||||||||||||||||||  | ||||||| |||||| | |||||||||||||| ||| |||| || | ||||||| ||||| |||    
T  18979091 gtcaaaattggcaaaaaggatcaaagttgcaaatgggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttg 18979190  T
Q  148 aaacttaaggggggaaaagtgcactttagcctattt 183  Q
    ||| ||| |||||||||||||||||||||| |||||    
T  18979191 aaagttagggggggaaaagtgcactttagcgtattt 18979226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 8389642 - 8389792
Alignment:
Q  30 caaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggac 129  Q
    ||||| ||| ||||||||||||||||||  |||||||| ||||  || |||| |  ||||||||| ||||||||||||||||||||  ||| ||  ||||    
T  8389642 caaatcagctttgacttggtcaaaattgttcaaaaggaccaaaaatgtaaaggggttaaatcttaggggactaaaattgtagtttttgtacataagggac 8389741  T
Q  130 taaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
     ||||||| || ||||||||||||||| |||||||||||||||||| ||||    
T  8389742 caaaattgcaactttttgaaacttaagaggggaaaagtgcactttaaccta 8389792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 22221316 - 22221466
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    ||||||||||||||||   |||||||||| | ||||||||||||| || |||| | |||||||||| |||   |||||||||||||| |||||||| ||     
T  22221316 ccaaataagcgttgaccaagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttaggggg 22221415  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
      ||||||| |||||||||||| ||| ||| ||||||||||||||||||||    
T  22221416 tcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 22221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 29 - 179
Target Start/End: Original strand, 22227658 - 22227808
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    ||||||||||||||||   |||||||||| | ||||||||||||| || |||| | |||||||||| |||   |||||||||||||| |||||||| ||     
T  22227658 ccaaataagcgttgaccaagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttaggggg 22227757  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
      ||||||| |||||||||||| ||| ||| ||||||||||||||||||||    
T  22227758 tcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 22227808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 37 - 179
Target Start/End: Complemental strand, 30335780 - 30335638
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||||||||||||||| |||||||| ||||| ||||||| | |||||||||| |||  |||||||||| ||||  ||||||| |  | ||||||    
T  30335780 gcgttgacttggtcaaaattgaacaaaaggaccaaagatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaatt 30335681  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    | |||||||| ||| ||||||| |||||| |||||||||||||    
T  30335680 gcaagtttttaaaagttaagggtggaaaaatgcactttagcct 30335638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 34 - 178
Target Start/End: Original strand, 11283166 - 11283310
Alignment:
Q  34 taagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaa 133  Q
    ||||||||||||| |||||||||||| |||| ||||||| |||||||| | |||||| ||| ||||| ||||||||  |||| |||| ||| || |||||    
T  11283166 taagcgttgactttgtcaaaattgactaaaatgatcaaaattgcaaaggggctaaattttaggggaccaaaattgtcatttttatacatagggggctaaa 11283265  T
Q  134 attgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    |||  || ||||||||| |||||||||| ||| ||||||||||||    
T  11283266 attacaactttttgaaagttaagggggggaaaatgcactttagcc 11283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 40471110 - 40471244
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaa 139  Q
    |||||| |||||||||||||||||| || ||||| | |||||||  ||||||||||||| ||||||||||||||||  || |||  |||| ||||||| |    
T  40471110 ttgactcggtcaaaattgaccaaaatgaccaaagatacaaagaggttaaatcttaaggggctaaaattgtagtttttgtattta-tggaccaaaattgta 40471208  T
Q  140 agtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    ||||||| ||| |||| |||||||||||||||||||    
T  40471209 agttttttaaagttaaagggggaaaagtgcacttta 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 40 - 178
Target Start/End: Original strand, 30336464 - 30336602
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaa 139  Q
    |||||||||||||||||||||||||||| ||||| ||||||  | ||||||||||  ||  |||||||||||||||  |||||||  | ||||||||  |    
T  30336464 ttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagagggttaaaattgtagtttttgtacttaggaggctaaaattata 30336563  T
Q  140 agtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    ||||||||||| ||| ||||| | |||||||||||||||    
T  30336564 agtttttgaaagttaggggggaagaagtgcactttagcc 30336602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 179
Target Start/End: Original strand, 43661783 - 43661925
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||||||||||||||| |||||||| ||||| |||||   | | |||||||| ||| | |||||| |||||||  ||| ||||||| |||||||    
T  43661783 gcgttgacttggtcaaaattgatcaaaaggaccaaagatgcaattgggcgaaatcttagggggccaaaattttagtttttgtacatagaggattaaaatt 43661882  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    | || ||||||||| ||||||| |||||||||||||| |||||    
T  43661883 gcaactttttgaaagttaagggtggaaaagtgcacttcagcct 43661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 1824049 - 1824174
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||| ||||| ||||||  | |||||||||| ||| | ||||||||||||||  ||||||| |||| ||||||| |||||||||    
T  1824049 gtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttg 1824148  T
Q  148 aaacttaaggggggaaaagtgcactt 173  Q
    ||| |||  ||||||||| |||||||    
T  1824149 aaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 1858494 - 1858619
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||| ||||| ||||||  | |||||||||| ||| | ||||||||||||||  ||||||| |||| ||||||| |||||||||    
T  1858494 gtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttg 1858593  T
Q  148 aaacttaaggggggaaaagtgcactt 173  Q
    ||| |||  ||||||||| |||||||    
T  1858594 aaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 18978149 - 18978029
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||   ||||||||||||||||||||| | |||||||||||||| | ||||||||||||||  ||||||| || | ||||||||||| |||||    
T  18978149 gtcaaaattggaaaaaaggatcaaagttgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttg 18978050  T
Q  148 aaacttaaggggggaaaagtgc 169  Q
    ||| || |||||||||||||||    
T  18978049 aaagtt-aggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 24123013 - 24122881
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||||||||||||| ||||| ||||||||  |||||||||| |||||||||||| |||||||  ||||||| ||   ||||||| || |||||    
T  24123013 ggtcaaaattgaccaaaaggaccaaagatgcaaagaagctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaattttt 24122914  T
Q  147 gaaacttaaggggggaaaagtgcactttagccta 180  Q
     ||| || ||||||||||| ||||||||||||||    
T  24122913 taaagtt-aggggggaaaaatgcactttagccta 24122881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 2379877 - 2380033
Alignment:
Q  30 caaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||||||||||||||||||||||||||||||||| | ||||| |||||| ||| |||||||||||||| | ||||||||||||| | ||| ||| ||     
T  2379877 caaataagcgttgacttggtcaaaattgaccaaaagaaccaaagatgcaaatgag-ctaaatcttaaggggccaaaattgtagttt-cgtacataggggc 2379974  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatttaatatta 190  Q
    | ||||||  || ||||||||| |||  |||||||||||  ||||||||||| |||||||||    
T  2379975 c-aaaattacaactttttgaaagtta--gggggaaaagtaaactttagcctaattaatatta 2380033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 5514111 - 5513979
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||| |||||||| ||||| ||||||| | |||||| ||| |||   ||||||||||||||  ||||||| || | ||||||| |||||||||    
T  5514111 gtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttg 5514012  T
Q  148 aaacttaaggggggaaaagtgcactttagcctat 181  Q
    ||| || |||||| ||||||||||||||||||||    
T  5514011 aaagtt-agggggtaaaagtgcactttagcctat 5513979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 22220537 - 22220388
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| ||| |||||||| |||||||||| |||||||| ||||| ||||||  | |||||||||| ||| | |||||||||||||| |||| ||| ||     
T  22220537 ccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacataggggg 22220438  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
      ||||||| |||| ||| ||| |||  ||||||||||||||||||||||    
T  22220437 tcaaaattgcaagtattttaaagttagagggggaaaagtgcactttagcc 22220388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 12353331 - 12353461
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||||||||||| || ||| |||||| | | |||||||||| ||| | |||||| |||||||  ||||||| || | ||||||| ||||||||    
T  12353331 ggtcaaaattgaccaaaagaattaaaattgcaatggggctaaatcttagggggccaaaattatagtttt-gtacttagggggccaaaattgcaagttttt 12353429  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||| |||| |||||||||||||||||||||||    
T  12353430 gaaagttaa-gggggaaaagtgcactttagcct 12353461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 29968307 - 29968434
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| |||||| ||| |||||||||| | | |||||||||| ||||| | ||||||||||||  ||||||| || | ||||||| ||||||||    
T  29968307 ggtcaaaattggccaaaatgattaaagttgcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattgcaagttttt 29968406  T
Q  147 gaaacttaaggggggaaaagtgcacttta 175  Q
     ||| |||| |||||||||||||||||||    
T  29968407 aaaagttaa-gggggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 43661406 - 43661267
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    ||||||||||||||||| ||||||||||| | ||||| ||||||| | |||||||||| ||| | |||||| |||||||  ||| ||  |||| ||||||    
T  43661406 gcgttgacttggtcaaagttgaccaaaagaaccaaagatgcaaaggggctaaatcttagggggccaaaattatagtttttgtacataagggaccaaaatt 43661307  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttag 176  Q
    | || ||||| ||| |||||||  ||||||||||||||||    
T  43661306 gtaacttttttaaaattaagggtagaaaagtgcactttag 43661267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 12352052 - 12351920
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| |||||||| | ||| |||||| ||| |||||||||| |||   ||||||||||||||  ||||||| ||   ||||||| || |||||    
T  12352052 ggtcaaaattgtccaaaagggttaaaattgcaatgaggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaattttt 12351953  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||| |||||||||| ||| |||||||||||||    
T  12351952 gaaagttaagggggggaaaatgcactttagcct 12351920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 18971041 - 18970920
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||| | ||||||| ||||||||||||| |  |||||||| ||||   ||||||||||||||  ||||||| || | ||||||||||| ||||    
T  18971041 ggtcaaaattggcaaaaaggaccaaagttgcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagatttt 18970942  T
Q  147 gaaacttaaggggggaaaagtgc 169  Q
    |||| || |||||||||||||||    
T  18970941 gaaagtt-aggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 32207302 - 32207425
Alignment:
Q  54 attgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaactt 153  Q
    |||||||||||||| ||||| ||||||||| |||||||||||| | | ||||||||||||||  ||||||| |    ||||||| |||||||||||  ||    
T  32207302 attgaccaaaaggaccaaagatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtt 32207401  T
Q  154 aaggggggaaaagtgcactttagcct 179  Q
    |  ||||| |||||||||||||||||    
T  32207402 a--ggggggaaagtgcactttagcct 32207425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 1823682 - 1823541
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagt-tgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||| ||||||||| ||||   ||||||  | |||||||||| |||||  |||||||||||||  ||||||||||   ||||||| ||||||||     
T  1823682 tcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagttttta 1823583  T
Q  148 aaacttaaggggggaaaagtgcactttagcctatttaatatt 189  Q
    ||| ||||||||| |||||| ||||||||||| | |||||||    
T  1823582 aaagttaagggggaaaaagtacactttagcctttataatatt 1823541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 1858127 - 1857986
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagt-tgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||| ||||||||| ||||   ||||||  | |||||||||| |||||  |||||||||||||  ||||||||||   ||||||| ||||||||     
T  1858127 tcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagttttta 1858028  T
Q  148 aaacttaaggggggaaaagtgcactttagcctatttaatatt 189  Q
    ||| ||||||||| |||||| ||||||||||| | |||||||    
T  1858027 aaagttaagggggaaaaagtacactttagcctttataatatt 1857986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 24123868 - 24123998
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatactt-agaggactaaaattgaaagtttt 145  Q
    ||||||||||||||||||||| ||||| ||||||| | |||||||||| | | ||||||||||| ||||  ||||| ||||| | ||||||| |||||||    
T  24123868 ggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagagg-ccaaaattgcaagtttt 24123966  T
Q  146 tgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||| ||| |||||   ||||| |||||||||||    
T  24123967 tgaaagttacggggg---aagtgtactttagccta 24123998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 178
Target Start/End: Complemental strand, 36249684 - 36249552
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    ||||||||||||  ||||||||| ||  |||||||| | ||||| | ||||||| |||| ||||  |||| || | |||  | | ||||||| || ||||    
T  36249684 tggtcaaaattggacaaaaggattaatattgcaaagggcctaaaacataagggattaaatttgtcatttttattcataggaggccaaaattgcaactttt 36249585  T
Q  146 tgaaacttaaggggggaaaagtgcactttagcc 178  Q
    |||||||||||||||||||||||||||||||||    
T  36249584 tgaaacttaaggggggaaaagtgcactttagcc 36249552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 34625171 - 34625238
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    |||||||||||||||||||||||||||||| |||||  |||||| || ||| ||||||||||||||||    
T  34625171 gtcaaaattgaccaaaaggatcaaagttgcgaagagggtaaatcatagggggctaaaattgtagtttt 34625238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 11282156 - 11282006
Alignment:
Q  30 caaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggac 129  Q
    ||||| ||||||||||| ||||||||||| ||||| ||||||| |||||||| |  ||||||||| |||   ||||||||  ||||  ||  ||| || |    
T  11282156 caaatcagcgttgactttgtcaaaattgatcaaaaagatcaaaattgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggc 11282057  T
Q  130 taaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
     ||||||| || ||||| ||| ||||||||| |||||||||||||| ||||    
T  11282056 caaaattgcaactttttaaaagttaagggggaaaaagtgcactttaaccta 11282006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 45114487 - 45114618
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||| ||||||| ||| |||||||||| |||  |||||||||  || | |||||||||||||   ||| ||| | || ||||||| ||||||||    
T  45114487 ggtcaaaattaaccaaaatgattaaagttgcaatgaggttaaatcttagaggcc-aaaattgtagtttgtgtacatagtgaaccaaaattgcaagttttt 45114585  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||| ||| ||| |||||||||||||| |||||    
T  45114586 gaaagttaggggcggaaaagtgcacttcagcct 45114618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 24359956 - 24359870
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    ||||||||||||||| |||||||||||||||||||  ||  |||| |||||| || |||||||||| |||   ||||||||||||||    
T  24359956 ccaaataagcgttgatttggtcaaaattgaccaaagtgactaaagatgcaaataggctaaatcttagggggtcaaaattgtagtttt 24359870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 2379009 - 2378940
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaaggg 98  Q
    |||||||||| |||| |||||||||||||| |||||||| ||||| |||||| || ||| ||||||||||    
T  2379009 ccaaataagcattgatttggtcaaaattgatcaaaaggaccaaagatgcaaataggctagatcttaaggg 2378940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 179
Target Start/End: Complemental strand, 8388605 - 8388463
Alignment:
Q  35 aagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaa 134  Q
    ||||||||| | |||||||||||  |||||||| ||||   |||||| | |||||||||| ||| | |||||| |||||||  ||| ||| || ||||||    
T  8388605 aagcgttgattgggtcaaaattgggcaaaaggaccaaaaacgcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaa 8388506  T
Q  135 ttgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    ||| || ||||| ||| |||  ||||| |||||||||||||||||    
T  8388505 ttgcaactttttaaaagtta--ggggggaaagtgcactttagcct 8388463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 40469475 - 40469360
Alignment:
Q  43 acttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagt 142  Q
    |||||||||||||||| |||||| | ||||| | ||||| |||||||||||| | |  |||||||||| ||||  || ||||||||  ||||||  || |    
T  40469475 acttggtcaaaattgatcaaaagaaccaaagatacaaagggactaaatcttatgtggttaaaattgtaatttttgtatttagaggatgaaaattacaaat 40469376  T
Q  143 ttttgaaacttaaggg 158  Q
    |||||||| |||||||    
T  40469375 ttttgaaagttaaggg 40469360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 45112999 - 45112875
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||  |||| ||||||| |||||||| | |||| ||||| ||||| |||||| || ||||  |||||||| ||||||||||  || ||||||    
T  45112999 gtcaaaattgataaaaaagatcaaaattgcaaaggggctaattcttaggggaccaaaattataatttttgtacttaga-gactaaaattacaaatttttg 45112901  T
Q  148 aaacttaaggggggaaaagtgcacttt 174  Q
    ||| || |||| |||||| ||||||||    
T  45112900 aaagtt-agggaggaaaaatgcacttt 45112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 11287907 - 11287779
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||||  |||| ||||||| ||||||||    ||| ||||| ||| | |||||||||||||   ||||||| || | ||||||| ||||||||    
T  11287907 ggtcaaaattgataaaaatgatcaaaattgcaaaggagttaattcttagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagttttt 11287808  T
Q  147 gaaacttaaggggggaaaagtgcacttta 175  Q
     ||| ||| ||| | ||||||||||||||    
T  11287807 taaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 11288914 - 11288965
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatt 182  Q
    ||||||| |||||||||||| ||| ||| | |||||||||||||||||||||    
T  11288914 aaaattgcaagtttttgaaagttaggggtgaaaaagtgcactttagcctatt 11288965  T

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Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 24483190 - 24483143
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  24483190 aaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagcc 24483143  T

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Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 5514295 - 5514372
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||||||||||  || ||||| | ||||||||| |||||||| ||| || |||||  |||||||||||||||||||    
T  5514295 aaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaatt-aggggataaaagtgcactttagccta 5514372  T

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Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 32968532 - 32968454
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||||||| |||||||||| | | || | ||||| | ||  |||||||| ||| |||||||||||||||||||||||||    
T  32968532 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccta 32968454  T

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Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 11456685 - 11456636
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||| || ||||||||| ||| |||| ||||||||||||||||||||    
T  11456685 aaaattgcaaatttttgaaaattagggggagaaaagtgcactttagccta 11456636  T

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Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 30570225 - 30570353
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    |||||||||||| ||||||||| ||||| ||||||  | |||||||||| ||| | |||||| || ||||  ||| || ||||  ||||||| || ||||    
T  30570225 tggtcaaaattggccaaaaggaccaaagatgcaaaagggctaaatcttagggggccaaaattctaatttttgtacata-aggatcaaaattgcaactttt 30570323  T
Q  146 tgaaacttaaggggggaaaagtgcacttta 175  Q
    | |||||||  |||| ||| ||||||||||    
T  30570324 taaaacttagaggggaaaaggtgcacttta 30570353  T

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Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 38980069 - 38980146
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||||||| |||||||||| | | || | ||||| | ||  |||||||| ||| ||||||||||||||||||||||||    
T  38980069 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 38980146  T

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Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 39011166 - 39011243
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||||||| |||||||||| | | || | ||||| | ||  |||||||| ||| ||||||||||||||||||||||||    
T  39011166 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 39011243  T

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Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 23169962 - 23170029
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaa-agagactaaatcttaagggactaaaattgtagtttt 115  Q
    ||||||||||||||||||||| |||| |||||  ||| ||||||| |||||||| |||||| |||||||    
T  23169962 gtcaaaattgaccaaaaggattaaagatgcaattgag-ctaaatcataagggaccaaaattatagtttt 23170029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 38974871 - 38974795
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    |||||||| |||||||||| | | || | ||||| | ||  |||||||| ||| |||||||||||||||||||||||    
T  38974871 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 38974795  T

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Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 39005969 - 39005893
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    |||||||| |||||||||| | | || | ||||| | ||  |||||||| ||| |||||||||||||||||||||||    
T  39005969 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 39005893  T

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Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 54540760 - 54540892
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||||| ||| | ||||||||||||||  ||||||  ||   ||||||| ||||||||    
T  54540760 ggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagttttt 54540859  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||| ||||||||||||||||||||||||||||    
T  54540860 gaaagttaaggggggaaaagtgcactttagcct 54540892  T

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Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 34 - 180
Target Start/End: Complemental strand, 7758546 - 7758400
Alignment:
Q  34 taagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaa 133  Q
    |||||||||||| ||||||||||||||||||||| ||||| | ||||| |  ||||||||| ||| | ||||||||||||||  ||||||| ||   |||    
T  7758546 taagcgttgactaggtcaaaattgaccaaaaggaccaaagatacaaaggggttaaatcttagggggcaaaaattgtagtttttgtacttagggggtcaaa 7758447  T
Q  134 attgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||| |||||||||||| ||||||||| |||||||||||||||||||    
T  7758446 attgcaagtttttgaaagttaagggggaaaaagtgcactttagccta 7758400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 8456618 - 8456479
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    ||||||||| ||||||||||||| |||||||||||| |||||| ||| |||||||||| ||| | ||||||||||||||  || |||| |||| ||||||    
T  8456618 gcgttgactaggtcaaaattgactaaaaggatcaaatttgcaatgaggctaaatcttagggggccaaaattgtagtttttgtatttaggggaccaaaatt 8456519  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagc 177  Q
    | |||||||||||| || |||||| ||||||||||||||||    
T  8456518 gcaagtttttgaaaatt-agggggaaaaagtgcactttagc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 19984981 - 19984845
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    |||||||||||||||||||||| ||||| ||||||| |  |||||||||| ||   ||||||||||||||  ||| ||| || | ||||||| |||||||    
T  19984981 tggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttt 19984882  T
Q  146 tgaaacttaaggggggaaaagtgcactttagcctatt 182  Q
    ||||||||| |||||||||||||||||||||||||||    
T  19984881 tgaaacttagggggggaaaagtgcactttagcctatt 19984845  T

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Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 7267774 - 7267642
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||||| ||| | |||||||||||||   ||||||| || | ||||||| ||||||||    
T  7267774 ggtcaaaattgaccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagttttt 7267675  T
Q  147 gaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||| |||| ||||||||||||||||||| ||||    
T  7267674 gaaagttaa-gggggaaaagtgcactttaaccta 7267642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 179
Target Start/End: Original strand, 46721173 - 46721322
Alignment:
Q  30 caaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggac 129  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||  ||||||| | |||||||||| ||||||||||||||||||||  ||| ||| ||      
T  46721173 caaatcagcgttgacttggtcaaaattgaccagaaggaccaaatatgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggt 46721272  T
Q  130 taaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||||| | || ||||| ||| ||| |||| |||||||||||||||||||    
T  46721273 taaaatcgcaactttttaaaagttagggggagaaaagtgcactttagcct 46721322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 51470121 - 51469972
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||| |||||||||||| |||||||| ||||||||||| | | |||||||||| |||  | ||||||| |||||  ||||||| ||     
T  51470121 ccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttaggggg 51470022  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    | ||||||| |||||||||||| ||| || ||||||||||||||||||||    
T  51470021 ccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcc 51469972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 6249748 - 6249637
Alignment:
Q  38 cgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattg 137  Q
    |||||||| |||||||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||  ||||||  ||| ||||||||    
T  6249748 cgttgactaggtcaaaattgatcaaaaggatcaaatttgcaatgagactaaatcttaaggga-taaaattgtagtttttgtacttaagggattaaaattg 6249650  T
Q  138 aaagtttttgaaa 150  Q
     ||||||||||||    
T  6249649 caagtttttgaaa 6249637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 178
Target Start/End: Complemental strand, 46720083 - 46719941
Alignment:
Q  36 agcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaat 135  Q
    |||||||||||| ||||||||||||||||||| ||||  ||||||  | ||||||||||  ||||||||||||||||||| |||| ||| || | |||||    
T  46720083 agcgttgacttgatcaaaattgaccaaaaggaccaaatatgcaaatgggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaat 46719984  T
Q  136 tgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
     | || ||||| ||| |||||||||||||| ||||||||||||    
T  46719983 cgcaactttttaaaagttaaggggggaaaaatgcactttagcc 46719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 54539885 - 54539754
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||| | |||||||||||||||||||| ||| |||||||||| ||||  ||||||||||||||  || |||| ||  |||||||| ||||||||    
T  54539885 gtcaaaattggcaaaaaggatcaaagttgcaaatgag-ctaaatcttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagttttt 54539787  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||| ||||||| ||||||||||||||||||||    
T  54539786 gaaagttaagggtggaaaagtgcactttagcct 54539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 47609838 - 47609695
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||||||||||||||  |||||||| ||||||||||| | | |||||||||| |||  | ||||||| |||||  ||||||| ||   ||||||    
T  47609838 gcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaatt 47609739  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    | |||||||||||| ||| ||||||||||||||| |||||||||    
T  47609738 gcaagtttttgaaagttagggggggaaaagtgcattttagccta 47609695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 47614315 - 47614185
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||| |||||||| | ||||| ||||||||| |||||||||| ||| | |||||||| ||||| |||||||| || | ||||||| |||||||||    
T  47614315 gtcaaaattaaccaaaagcaccaaagatgcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttg 47614216  T
Q  148 aaacttaaggggggaaaagtgcactttagcc 178  Q
    ||| |||  |||| |||||||||||||||||    
T  47614215 aaagttagaggggaaaaagtgcactttagcc 47614185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 29932660 - 29932800
Alignment:
Q  38 cgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattg 137  Q
    |||||||| ||||||||||| |||||||||  |   |||||||| ||||||||||||||||   ||||||||||||||  ||||||| || | |||||||    
T  29932660 cgttgactaggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttaggggcc-aaaattg 29932758  T
Q  138 aaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
     |||||||||||| |||  |||||||||||||||||||||||    
T  29932759 caagtttttgaaagttagagggggaaaagtgcactttagcct 29932800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 29981814 - 29981954
Alignment:
Q  38 cgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattg 137  Q
    |||||||| ||||||||||| |||||||||  |   |||||||| ||||||||||||||||   ||||||||||||||  ||||||| || | |||||||    
T  29981814 cgttgactaggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttaggggcc-aaaattg 29981912  T
Q  138 aaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
     |||||||||||| |||  |||||||||||||||||||||||    
T  29981913 caagtttttgaaagttagagggggaaaagtgcactttagcct 29981954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 183
Target Start/End: Original strand, 7268797 - 7268932
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||| ||||||||| ||| |||||| | |||||||||||| | | | |||||||||||||  ||||||||  | | ||||||| ||||||||    
T  7268797 ggtcaaaattgatcaaaaggattaaaattgcaatgggactaaatcttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 7268896  T
Q  147 gaaacttaaggggggaaaagtgcactttagcctattt 183  Q
    |||| || ||||||||||||||||||||| |||||||    
T  7268897 gaaagtt-aggggggaaaagtgcactttaacctattt 7268932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 38 - 180
Target Start/End: Complemental strand, 23769996 - 23769855
Alignment:
Q  38 cgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||||||||||||||||||||||| ||||| |||||| ||| | |||||||| ||| | ||||||||||||||   || ||||||| |||||||    
T  23769996 cgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgag-cgaaatcttaggggtc-aaaattgtagtttttgcacatagaggattaaaatt 23769899  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    | || || |||||| ||||||| |||||||||||||| ||||||    
T  23769898 gcaacttgttgaaagttaagggtggaaaagtgcacttcagccta 23769855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 23770367 - 23770505
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    ||||||||||||||||| |||||||||||||  |||| ||||||| |  ||||||||| ||| ||||||||||||||||  ||| ||  |||| ||||||    
T  23770367 gcgttgacttggtcaaagttgaccaaaaggactaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacataagggaccaaaatt 23770466  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    | || ||||| ||| |||||||| ||||| |||||||||    
T  23770467 gtaacttttttaaaattaaggggagaaaattgcacttta 23770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 179
Target Start/End: Original strand, 55191967 - 55192096
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttga 148  Q
    ||||||||||| |||| ||||||| |||||||| |  ||| |||| |||| | ||||||||||||||  |||||||||| | ||||||| ||||||||||    
T  55191967 tcaaaattgacaaaaatgatcaaaattgcaaaggggttaattcttgaggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttga 55192066  T
Q  149 aacttaaggggggaaaagtgcactttagcct 179  Q
    || |||||||||||||| | |||||||||||    
T  55192067 aagttaaggggggaaaa-tacactttagcct 55192096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 11670528 - 11670379
Alignment:
Q  34 taagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaa 133  Q
    |||||||||| |  ||||||||||| ||||||||  |||  ||||| | ||||||||| |||||||| |||||| ||||||| |||||||| ||||||||    
T  11670528 taagcgttgaataagtcaaaattgatcaaaaggacaaaaaatgcaatgggactaaatcataagggaccaaaattatagtttttatacttaggggactaaa 11670429  T
Q  134 attgaaagtttttgaaacttaaggggggaaaagtgcactttagcctattt 183  Q
    |||| || ||||||||| ||||| ||| |||| | |  ||||||||||||    
T  11670428 attgcaaatttttgaaaattaagcgggaaaaaataccatttagcctattt 11670379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 181
Target Start/End: Original strand, 47610539 - 47610684
Alignment:
Q  36 agcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaat 135  Q
    |||||||||| |||||||||||  |||||||| ||||||||||| | | |||||||||| |||    ||||||| |||||  ||||||| || | |||||    
T  47610539 agcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaat 47610638  T
Q  136 tgaaagtttttgaaacttaaggggggaaaagtgcactttagcctat 181  Q
    || |||||||||||| |||  ||||||||||||||||||| |||||    
T  47610639 tgcaagtttttgaaagttagagggggaaaagtgcactttaacctat 47610684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 181
Target Start/End: Complemental strand, 29931367 - 29931223
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||  ||||||||||||||||||||  |   |||||||| |  ||||||||| ||| | ||||||||||||||  || |||| || | ||||||    
T  29931367 gcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaatt 29931268  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagcctat 181  Q
    | |||||||||||| ||| ||| ||||||||||||||||||||||    
T  29931267 gcaagtttttgaaagttaggggtggaaaagtgcactttagcctat 29931223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 181
Target Start/End: Complemental strand, 29980521 - 29980377
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    |||||||||  ||||||||||||||||||||  |   |||||||| |  ||||||||| ||| | ||||||||||||||  || |||| || | ||||||    
T  29980521 gcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaatt 29980422  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagcctat 181  Q
    | |||||||||||| ||| ||| ||||||||||||||||||||||    
T  29980421 gcaagtttttgaaagttaggggtggaaaagtgcactttagcctat 29980377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 51470407 - 51470557
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||| |||||||||||| |||||||| ||||||||||| |   |||||||||| |||    ||||||| |||||  ||||||| |||    
T  51470407 ccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggagctaaatcttaggggtgctaaattgtggttttggtacttagggga 51470506  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
       |||||| |||||||||||| || ||||||||| ||||||||||||||||    
T  51470507 tctaaattgcaagtttttgaaagtt-aggggggaagagtgcactttagccta 51470557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 19986039 - 19986175
Alignment:
Q  46 tggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta-agggactaaaattgtagttttcatacttaga--ggactaaaattgaaagt 142  Q
    ||||||||||||||| ||| || ||||| ||||||| |  ||||||||| |||| | |||||||||||||| |||| |||   || | ||||||| ||||    
T  19986039 tggtcaaaattgaccgaaatgaccaaagatgcaaaggggttaaatcttagagggtc-aaaattgtagtttttatacataggaggggccaaaattgcaagt 19986137  T
Q  143 ttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||||||||||||| |||||||||||||||||||||||    
T  19986138 ttttgaaacttaagaggggaaaagtgcactttagccta 19986175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 178
Target Start/End: Original strand, 52840551 - 52840705
Alignment:
Q  24 aagttccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatactta 123  Q
    |||| ||| ||||||||||||| |||||||||| ||||||| ||| ||| |||||| | | |||||||||| |||   |||||||| ||||| ||| |||    
T  52840551 aagtgccacataagcgttgactcggtcaaaattaaccaaaatgataaaatttgcaatggggctaaatcttagggggacaaaattgttgttttgataatta 52840650  T
Q  124 gaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    | |  | ||||||| |||||||||||| ||| ||| ||||||| |||||||||||    
T  52840651 gggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcactttagcc 52840705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 53614895 - 53614817
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    |||||||||||||| |||  |||||||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||    
T  53614895 aaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagccta 53614817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 12700303 - 12700173
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||||||||||| ||||| ||||| | | ||||||| || |||   ||||||||||||||  ||||||| || | ||||||| |||||||||    
T  12700303 gtcaaaattgaccaaaaggaccaaagatgcaatgtggctaaatcatagggggtcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttg 12700204  T
Q  148 aaacttaaggggggaaaagtgcactttagccta 180  Q
    ||| |||  ||||| ||||||||||||||||||    
T  12700203 aaagtta--ggggggaaagtgcactttagccta 12700173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 54986977 - 54987103
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta-agggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    ||||||||||| |||||| |||||||| |||||||   |||||||||| |||| | |||||| ||||||| |||| ||| |||||||||| | || ||||    
T  54986977 ggtcaaaattggccaaaatgatcaaagatgcaaaggagctaaatcttagagggtc-aaaattatagtttttatacataggggactaaaatcgcaactttt 54987075  T
Q  146 tgaaacttaaggggggaaaagtgcacttta 175  Q
    |||||||||  |||||||||||||||||||    
T  54987076 tgaaactta--gggggaaaagtgcacttta 54987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 51347409 - 51347264
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaatt 136  Q
    ||||||||| |||||| ||||| ||||| |||||||||||||||  |  ||||||||| |||   ||||||||  ||||  | | |||||||| ||||||    
T  51347409 gcgttgactaggtcaacattgatcaaaatgatcaaagttgcaaacgggttaaatcttagggggtcaaaattgtcatttttgttcatagaggaccaaaatt 51347310  T
Q  137 gaaagtttttgaaacttaaggggggaaaagtgcactttagcctatt 182  Q
    | || ||||| ||||||||| |||| ||||||||||||| ||||||    
T  51347309 gcaactttttcaaacttaagagggggaaagtgcactttaacctatt 51347264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 534648 - 534497
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatactta-gagg 127  Q
    |||||| |||||  |||| |||||||||| ||||| ||| ||||| |||||| || |||||||||| ||| | ||||||||||||||  ||| || ||||    
T  534648 ccaaatcagcgtacacttagtcaaaattggccaaatggaccaaagatgcaaataggctaaatcttagggggccaaaattgtagtttttgtacataggagg 534549  T
Q  128 actaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
     | ||||||| |||||||||| | |||  |||| |||||||||||||||||||    
T  534548 tc-aaaattgcaagtttttgagagttagaggggaaaaagtgcactttagccta 534497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 8876036 - 8875904
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    |||||||||||| ||||||| ||||  ||||||  | |||||||||| ||| | ||||||||||||||  ||| ||  || ||||||||| |  |||||     
T  8876036 gtcaaaattgactaaaaggaccaaatatgcaaattggctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgcagctttttc 8875937  T
Q  148 aaacttaaggggggaaaagtgcactttagccta 180  Q
     ||||||||||| ||||||||||||||||||||    
T  8875936 gaacttaaggggtgaaaagtgcactttagccta 8875904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 24516553 - 24516459
Alignment:
Q  85 ctaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcct 179  Q
    |||||||||||||| | |||||||||||||| |||||||| |  | ||||||| |||||||| ||| ||| ||||| ||||||||||||| ||||    
T  24516553 ctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcactttggcct 24516459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 47615602 - 47615651
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  47615602 aaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 47615651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 4271571 - 4271503
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||   ||||||||||||||||    
T  4271571 ggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaagatgctaaaattgtagtttt 4271503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 49216378 - 49216247
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttt 145  Q
    ||||||||||| |||||| |||||||| |||||| ||| ||||||||||||||   | ||||||||||||  ||| ||| ||   ||||||| || ||||    
T  49216378 ggtcaaaattggccaaaatgatcaaagatgcaaatgag-ctaaatcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaactttt 49216280  T
Q  146 tgaaacttaaggggggaaaagtgcactttagcc 178  Q
    ||||||||| | | |||||||||||||||||||    
T  49216279 tgaaacttaggcgtggaaaagtgcactttagcc 49216247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 181
Target Start/End: Original strand, 51038742 - 51038894
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||||| |||||||||||   ||||||| ||   |||||||| |   || ||||||||||| ||||||||||||||  | | ||| ||     
T  51038742 ccaaatcagcgttgactcggtcaaaattgctaaaaaggaccactattgcaaaggggacaattcttaagggaccaaaattgtagtttttgttcataggggg 51038841  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctat 181  Q
      ||||||| || ||||| ||| ||||||| ||||||||||||||||||||||    
T  51038842 tcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcctat 51038894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 6170388 - 6170281
Alignment:
Q  60 caaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaagggg 159  Q
    ||||| ||||||| |||||| ||||||||||||||||||  |||||||||| ||||  ||||||  |||  ||||||| |||||||||||| ||| |||     
T  6170388 caaaatgatcaaatttgcaatgagactaaatcttaaggg--taaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagttatgggt 6170291  T
Q  160 ggaaaagtgc 169  Q
    | ||||||||    
T  6170290 gaaaaagtgc 6170281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 178
Target Start/End: Original strand, 535790 - 535883
Alignment:
Q  85 ctaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    |||||||||| |||   |||||| ||||||| |||||||  |||| ||||||| |||||||||||| ||| ||| |||||||| ||||||||||    
T  535790 ctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 535883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 46492977 - 46493018
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgca 78  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  46492977 gcgttgactaggtcaaaattgaccaaaaggatcaaagttgca 46493018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 52839168 - 52839036
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||||||||||||| ||| |||||| | | |||||| |||  ||  ||||||||| |||||  ||||||||||   ||||||  || |||||    
T  52839168 ggtcaaaattgaccaaaaggatgaaatttgcaatggggctaaattttagaggggtaaaattgttgttttggtacttagagggtcaaaattacaaattttt 52839069  T
Q  147 gaaacttaaggggggaaaagtgcactttagcct 179  Q
    | || |||  ||||||||| |||||||||||||    
T  52839068 ggaagttagagggggaaaattgcactttagcct 52839036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 11671313 - 11671443
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttga 148  Q
    |||||||||| |||||||| ||||| || |||| |  |||||| || |||   |||  ||||||||| ||| |||| || ||||||||| ||||||||||    
T  11671313 tcaaaattgatcaaaaggaccaaagatgtaaaggggttaaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttga 11671412  T
Q  149 aacttaaggggggaaaagtgcactttagccta 180  Q
    || || ||| || |||||||||||||||||||    
T  11671413 aagtt-aggcggaaaaagtgcactttagccta 11671443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 159
Target Start/End: Original strand, 34019117 - 34019227
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagttgcaaa-gagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||||||||||| ||||| |||||| ||| |||||| ||| ||||| ||||||||||| ||  ||| ||| ||   ||||||| |||||||||    
T  34019117 tcaaaattgaccaaaaggaccaaagatgcaaatgag-ctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttg 34019215  T
Q  148 aaacttaagggg 159  Q
    ||| ||||||||    
T  34019216 aaagttaagggg 34019227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 22776782 - 22776916
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||   ||| ||| ||||  ||||||| | |||| ||||| ||| | ||||||||||||||  ||| ||| || | ||||||| || ||| |    
T  22776782 ggtcaaaattgggaaaatggaccaaatatgcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttct 22776881  T
Q  147 gaaacttaaggggggaaaagtgcactttagcctat 181  Q
    |||| ||| ||| ||||||||||||||||||||||    
T  22776882 gaaagttaggggtggaaaagtgcactttagcctat 22776916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 31039257 - 31039298
Alignment:
Q  142 tttttgaaacttaaggggggaaaagtgcactttagcctattt 183  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  31039257 tttttaaaacttaaggggtgaaaagtgcactttagcctattt 31039298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 39843103 - 39843054
Alignment:
Q  126 ggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    |||||||||||| || ||||| ||||||||||||| ||||||||||||||    
T  39843103 ggactaaaattgcaactttttcaaacttaagggggaaaaagtgcacttta 39843054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 51037684 - 51037536
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| || ||||||| |||||||||||   ||||||| ||    ||||||| | |||| ||||| ||| ||||||||||||||||  | | ||||||     
T  51037684 ccaaatcagtgttgactcggtcaaaattgttaaaaaggaccactactgcaaaggggctaattcttagggggctaaaattgtagtttttgttcatagaggg 51037585  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
      ||||||| || ||||||||| |||| ||| ||||||||||||||||||    
T  51037584 tcaaaattgcaactttttgaaagttaa-gggagaaaagtgcactttagcc 51037536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 5001275 - 5001195
Alignment:
Q  103 aaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctattt 183  Q
    ||||||| |||||  ||||||| || | ||||||| ||| ||||||||  || ||| ||||||||||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcctattt 5001195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 47615548 - 47615608
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattg 108  Q
    |||||||||||||||||||| ||||| ||||||| | |||||||||| ||| | |||||||    
T  47615548 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattg 47615608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 10584003 - 10584057
Alignment:
Q  39 gttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatctta 94  Q
    |||||||||||||||||||||||||||| ||||  |||||||| | ||||||||||    
T  10584003 gttgacttggtcaaaattgaccaaaagg-tcaatattgcaaaggggctaaatctta 10584057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 31645104 - 31645001
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||  |||||||| ||||| ||||||  | |||||||||| | |  |||||||||||||||   |||||| || | ||||||| ||||||||    
T  31645104 ggtcaaaattggtcaaaaggaccaaagatgcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaagttttt 31645005  T
Q  147 gaaa 150  Q
    ||||    
T  31645004 gaaa 31645001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 40426738 - 40426877
Alignment:
Q  37 gcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcata-cttagaggactaaaat 135  Q
    |||||||||||||||||||| |||||||||| |||||   |||||   ||||||| || ||| | ||||||||| ||||  ||  | || || | ||| |    
T  40426738 gcgttgacttggtcaaaattaaccaaaaggaccaaagacacaaaggagctaaatcatagggggccaaaattgtaatttttgtatataaggggccgaaatt 40426837  T
Q  136 tgaaagtttttgaaacttaaggggggaaaagtgcacttta 175  Q
    || || ||||| ||| ||||||||||||||||||||||||    
T  40426838 tgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 80
Target Start/End: Complemental strand, 53897231 - 53897200
Alignment:
Q  49 tcaaaattgaccaaaaggatcaaagttgcaaa 80  Q
    ||||||||||||||||||||||||||||||||    
T  53897231 tcaaaattgaccaaaaggatcaaagttgcaaa 53897200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 188
Target Start/End: Original strand, 52281572 - 52281658
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatttaatat 188  Q
    |||||||| |||||||||| | | || | ||||| | ||  ||||||||  || ||||||||||||||||||||||||| |||||||    
T  52281572 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcctaattaatat 52281658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 784909 - 784985
Alignment:
Q  39 gttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    |||||||  ||||||||||  ||||| |||||||| |||||||||  ||||| |||  ||| |||||||||||||||    
T  784909 gttgactgagtcaaaattggtcaaaatgatcaaagatgcaaagaggttaaattttagaggattaaaattgtagtttt 784985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 52276380 - 52276300
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatt 182  Q
    |||||||| |||||||||| | | || | ||||| | ||  ||||||||  || |||||||||||||||||||||||||||    
T  52276380 aaaattgttgttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcctatt 52276300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 5390 - 5541
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||||||| ||||||||||||||||| ||||||||||||||| ||| || | | ||||||||||||||   ||||||||||||||  ||||||  ||     
T  5390 ccaaataagctttgacttggtcaaaattaaccaaaaggatcaaatttgtaatggggctaaatcttaagggggcaaaattgtagtttttgtacttaagggg 5489  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
      ||||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  5490 tcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagccta 5541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 191
Target Start/End: Complemental strand, 4588 - 4429
Alignment:
Q  32 aataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggacta 131  Q
    ||||||| |||||||||||||||| |||||||| || |||| ||| || | | |||||| ||| |||  |||||||||| ||||  ||||||  || |||    
T  4588 aataagctttgacttggtcaaaatcgaccaaaatgaccaaatttgtaatggggctaaattttaggggggtaaaattgtaatttttgtacttaaggggcta 4489  T
Q  132 aaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatttaatattat 191  Q
    |||||| |||||||||||| ||| ||||| ||| ||||||||||||||| ||| ||||||    
T  4488 aaattgtaagtttttgaaaattaggggggaaaatgtgcactttagcctagttattattat 4429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 61422 - 61559
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaa 139  Q
    |||||||||||||||||||||||||||| ||||| ||||||  | ||||||| || ||| | |||||| |||||||  ||||||| || ||||||||| |    
T  61422 ttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgca 61521  T
Q  140 agtttttgaaacttaaggggggaaaagtgcactttagc 177  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  61522 agtttttgaaaattaagggaggaaaagtgcactttagc 61559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 60228 - 60090
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaa 139  Q
    ||||||||||||||||||||||||| || ||||| ||||||| | ||||||| || |||   |||||||||||||| |||| ||| ||   ||||||| |    
T  60228 ttgacttggtcaaaattgaccaaaaagaccaaagatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgca 60129  T
Q  140 agtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    ||||||| ||| |||  || |||||||||||||||||||    
T  60128 agtttttaaaagttagaggaggaaaagtgcactttagcc 60090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 19618 - 19486
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||||||||| |||||||| ||||||| |  ||||||||| ||||  |||||||||||||| |||||||| || | ||||||| ||| |||||    
T  19618 gtcaaaattgaccaaaatgatcaaagatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggttttg 19519  T
Q  148 aaacttaaggggggaaaagtgcactttagccta 180  Q
    ||| |||||||||||||| ||||||||||||||    
T  19518 aaaattaaggggggaaaaatgcactttagccta 19486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 49385 - 49538
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| |||||||| ||||||||||||| ||||||||| |||||||||||||   |||||||||| |||   |||||||||||||| ||   ||| ||     
T  49385 ccaaatcagcgttgatttggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttataggggg 49484  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatt 182  Q
    | ||||||| || ||||| ||| |||||||| ||||||||||||||||||||||    
T  49485 ccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcctatt 49538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 39391 - 39339
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctattt 183  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||||||    
T  39391 aaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcctattt 39339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 43564 - 43613
Alignment:
Q  131 aaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||| || ||||||||||||||||||| |||| ||||||| ||||||    
T  43564 aaaattgcaactttttgaaacttaagggggaaaaactgcacttaagccta 43613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 29 - 187
Target Start/End: Complemental strand, 1588 - 1430
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||| ||||||  | |||||||||| |||   |||||| ||||||| |||| ||| ||     
T  1588 ccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttagggggtcaaaattatagtttttatacataggggg 1489  T
Q  129 ctaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcctatttaata 187  Q
      ||||||| |||||||| ||| |||  ||||||||||| |||||||||||||| ||||    
T  1488 tcaaaattgcaagttttttaaagttagagggggaaaagtacactttagcctattaaata 1430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 180
Target Start/End: Original strand, 3282 - 3410
Alignment:
Q  51 aaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaa 150  Q
    ||||||| | ||||||||||||||||||||| | |||||||||| ||||| |||||| |||||||  ||| ||  ||   ||||||| ||||||||||||    
T  3282 aaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaa 3381  T
Q  151 cttaaggggggaaaagtgcactttagccta 180  Q
      ||||||||||||||||||||||||||||    
T  3382 -gtaaggggggaaaagtgcactttagccta 3410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 364 - 233
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||   ||||||||||||  ||||||| | |||| ||||| ||||| |||||| |||||||  ||| ||| |||| ||||||| || |||||    
T  364 ggtcaaaattgggaaaaaggatcaaatatgcaaaggggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaacttttt 265  T
Q  147 gaaacttaaggggggaaaagtgcactttagcc 178  Q
    |||| |||||||||| ||||||||||||||||    
T  264 gaaagttaagggggggaaagtgcactttagcc 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 189
Target Start/End: Complemental strand, 6461 - 6332
Alignment:
Q  60 caaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaagggg 159  Q
    |||||||| ||||| |||||| || |||||||||| |||   ||||||||||||||  ||| ||| || ||||||| | || |||||||||||||||||     
T  6461 caaaaggaccaaagatgcaaaaaggctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggc 6362  T
Q  160 ggaaaagtgcactttagcctatttaatatt 189  Q
    |||||||||||||||| ||||  |||||||    
T  6361 ggaaaagtgcactttaacctaaataatatt 6332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 18746 - 18877
Alignment:
Q  47 ggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagttttt 146  Q
    |||||||||||||||||| ||| |||||||||| | | |||||| ||||||| | |||||| |||||||  ||| ||| |||| ||||||| || |||||    
T  18746 ggtcaaaattgaccaaaatgattaaagttgcaatggggctaaattttaaggggccaaaattatagtttttgtacctaggggaccaaaattgcaaattttt 18845  T
Q  147 gaaacttaaggggggaaaagtgcactttagcc 178  Q
     ||| ||| | ||| |||||||||||||||||    
T  18846 aaaagttaggagggaaaaagtgcactttagcc 18877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 17546 - 17468
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagccta 180  Q
    ||||||||||||||  ||||||| || | ||||||| |||||||| ||| ||||||||| |||||||||||||||||||    
T  17546 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagccta 17468  T

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Target: scaffold0059 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 3805 - 3703
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||||||||| ||| |||||||||| | | |||||||||| |||||||||||| ||||||   |||| || || | ||||||| |||||||||    
T  3805 gtcaaaattgaccaaaaagattaaagttgcaatgcggctaaatcttaggggactaaaattatagtttctttactcagggggccaaaattgcaagtttttg 3706  T
Q  148 aaa 150  Q
    |||    
T  3705 aaa 3703  T

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Target: scaffold0186 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 23209 - 23081
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttg 147  Q
    ||||||||||| ||||| ||| ||| |||||| | | ||||| |||| ||||  || ||||| |||||  ||||||||||   ||||||| |||||||||    
T  23209 gtcaaaattgagcaaaatgataaaatttgcaatggggctaaagcttaggggagcaagattgttgttttggtacttagagggacaaaattgcaagtttttg 23110  T
Q  148 aaacttaaggggggaaaagtgcactttagcc 178  Q
    ||| |||  ||||||||||||||||||||||    
T  23109 aaagtta--gggggaaaagtgcactttagcc 23081  T

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Target: scaffold0045 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 48444 - 48370
Alignment:
Q  40 ttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    ||||||||||||||||||||| |||||| ||||| ||||||| || ||||||||| ||||| |||||| |||||||    
T  48444 ttgacttggtcaaaattgacc-aaaggaccaaagatgcaaagggaataaatcttaggggaccaaaattatagtttt 48370  T

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Target: scaffold0045; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 49109 - 49185
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    |||||||||||||| ||||||||  | | ||||||| |||||||| ||| ||||||| ||||||||||| |||||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagcc 49185  T

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Target: scaffold0093 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 2417 - 2564
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| | |||||||| |||||||||||||||||||||| ||| |||||| |   ||||||| || ||| | ||||| || |||||  ||||||| ||     
T  2417 ccaaatcatcgttgactgggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttaggggg 2516  T
Q  129 ctaaaattgaaag-tttttgaaacttaaggggggaaaagtgcactttagc 177  Q
      ||||||| ||| ||||||||| |||  |||||||||||||||||||||    
T  2517 tcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagc 2564  T

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Target: scaffold0093; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 7040 - 7187
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| | |||||||| |||||||||||||||||||||| ||| |||||| |   ||||||| || ||| | ||||| || |||||  ||||||| ||     
T  7040 ccaaatcatcgttgactgggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttaggggg 7139  T
Q  129 ctaaaattgaaag-tttttgaaacttaaggggggaaaagtgcactttagc 177  Q
      ||||||| ||| ||||||||| |||  |||||||||||||||||||||    
T  7140 tcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagc 7187  T

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Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 7394 - 7517
Alignment:
Q  56 tgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaa 155  Q
    |||| ||||||||||||||||||||| | |||||||||| |||   |||||||||||||   ||| ||| ||   ||||| | || ||||| |||||||     
T  7394 tgactaaaaggatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttag 7493  T
Q  156 ggggggaaaagtgcactttagcct 179  Q
     |||||| ||||||||||||||||    
T  7494 agggggacaagtgcactttagcct 7517  T

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Target: scaffold0049; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 7890 - 7957
Alignment:
Q  48 gtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagtttt 115  Q
    |||||||||| ||||||||||||||||||||||| | ||||||| || |||  ||||||| |||||||    
T  7890 gtcaaaattggccaaaaggatcaaagttgcaaaggggctaaatcatagggggttaaaattctagtttt 7957  T

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Target: scaffold0112 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 37296 - 37148
Alignment:
Q  29 ccaaataagcgttgacttggtcaaaattgaccaaaaggatcaaagttgcaaagagactaaatcttaagggactaaaattgtagttttcatacttagagga 128  Q
    |||||| | |||||||| |||||||||||||||||| ||| ||| || ||| | | ||||||| || ||| | |||||||| |||||  ||||||| ||     
T  37296 ccaaatcatcgttgactaggtcaaaattgaccaaaatgatgaaattttcaatggggctaaatcgtagggggccaaaattgttgtttttgtacttaggggg 37197  T
Q  129 ctaaaattg-aaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
      ||||||| ||| ||||| |||  ||  ||||||||||||||||||||||    
T  37196 tcaaaattgcaaattttttaaaagata--gggggaaaagtgcactttagcc 37148  T

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Target: scaffold0227 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 144 - 220
Alignment:
Q  102 aaaattgtagttttcatacttagaggactaaaattgaaagtttttgaaacttaaggggggaaaagtgcactttagcc 178  Q
    |||||||| |||||||||| | | || | ||||| | ||  |||||||| ||| |||||||||||||||||||||||    
T  144 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 220  T

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