View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18273_high_26 (Length: 240)
Name: NF18273_high_26
Description: NF18273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18273_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 29 - 221
Target Start/End: Original strand, 9716309 - 9716501
Alignment:
| Q |
29 |
tcgagagtaattaaaagcacaagatgcaagaatggaagatgcttagagttaaacgagggaatgaagaagatgatattagttaatcatgtttacccttgat |
128 |
Q |
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| T |
9716309 |
tcgagagtaattaaaagcataagatacaagaatggaagatgcttagagttaaacgagagaatgaagaacatgatattagttaatcatgtttacccttaat |
9716408 |
T |
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| Q |
129 |
gtccatcatggacttaggtgagacaacactgatattcataatccattaaactttttgt-aaaaggtcaataacttttgatgttaggaagataat |
221 |
Q |
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|||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||||||||||||||||||||||| |
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| T |
9716409 |
gtccatcatggacttaggtgcgacaacact-atattcataatccattaaactctttgtaaaaagttcaacaacttttgatgttaggaagataat |
9716501 |
T |
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