View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18273_high_27 (Length: 237)
Name: NF18273_high_27
Description: NF18273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18273_high_27 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 6508724 - 6508944
Alignment:
| Q |
1 |
tatataaaattcctggtgtatcaactaccaggaattctacctggtaaactctgtacaagtgagcgaagagacaaacaatagtgaaaacgaaatatatact |
100 |
Q |
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| T |
6508724 |
tatataaaattcctggtgtatcaactaccgggaattctacctggtaaactctgtacaagtgagccaagagacagacaatagtgaaaacgaaatatatact |
6508823 |
T |
|
| Q |
101 |
nnnnnnntcttaaccctataaatattgttgtcgttttgttacatatgtataaagaaatctgattatggttttaagagaatgtgttgtgtgttgagttcat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6508824 |
aaaaaaatcttaaccctataaatattgttgtcgttttgttacatatgtataaagaaatctgattatggttttaagagaatgtgttgtgtgttgagttcat |
6508923 |
T |
|
| Q |
201 |
cggtttgattaataataaatt |
221 |
Q |
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||||||||||||||||||||| |
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| T |
6508924 |
cggtttgattaataataaatt |
6508944 |
T |
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