View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18273_high_6 (Length: 459)

Name: NF18273_high_6
Description: NF18273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18273_high_6
NF18273_high_6
[»] chr3 (56 HSPs)
chr3 (309-443)||(52824040-52824174)
chr3 (125-220)||(17470404-17470499)
chr3 (122-220)||(27714897-27714995)
chr3 (126-220)||(53982011-53982105)
chr3 (124-220)||(54868901-54868997)
chr3 (126-220)||(8076393-8076487)
chr3 (126-220)||(33644200-33644294)
chr3 (124-220)||(49607412-49607508)
chr3 (131-220)||(52629305-52629394)
chr3 (127-220)||(31456690-31456783)
chr3 (250-311)||(33644324-33644385)
chr3 (124-202)||(11095377-11095455)
chr3 (250-304)||(53982135-53982189)
chr3 (250-311)||(48587016-48587077)
chr3 (250-310)||(11095283-11095343)
chr3 (250-304)||(31456813-31456867)
chr3 (250-304)||(49607538-49607592)
chr3 (127-220)||(13898061-13898154)
chr3 (250-311)||(52629424-52629485)
chr3 (250-311)||(54868810-54868871)
chr3 (124-220)||(41189770-41189866)
chr3 (250-304)||(11347844-11347898)
chr3 (126-220)||(26141538-26141632)
chr3 (130-216)||(48587101-48587187)
chr3 (124-205)||(33118872-33118953)
chr3 (125-220)||(9562998-9563093)
chr3 (124-211)||(36707439-36707526)
chr3 (250-304)||(9563123-9563177)
chr3 (126-220)||(14623845-14623939)
chr3 (250-304)||(20764837-20764891)
chr3 (250-304)||(26141452-26141506)
chr3 (142-220)||(26754711-26754789)
chr3 (254-304)||(33118772-33118822)
chr3 (250-304)||(36707350-36707404)
chr3 (126-216)||(45058563-45058652)
chr3 (124-220)||(11347928-11348024)
chr3 (256-304)||(30801655-30801703)
chr3 (125-220)||(8956761-8956856)
chr3 (125-208)||(24699972-24700055)
chr3 (254-304)||(35536754-35536804)
chr3 (250-304)||(41189686-41189740)
chr3 (250-304)||(51419282-51419336)
chr3 (126-220)||(51419366-51419460)
chr3 (251-304)||(35965704-35965757)
chr3 (256-304)||(27714825-27714873)
chr3 (250-309)||(17470529-17470588)
chr3 (125-220)||(35536625-35536720)
chr3 (254-304)||(8076521-8076571)
chr3 (170-220)||(20764921-20764971)
chr3 (125-196)||(21746211-21746284)
chr3 (130-220)||(30801739-30801829)
chr3 (124-194)||(35965806-35965876)
chr3 (250-304)||(47531989-47532043)
chr3 (260-304)||(26754829-26754873)
chr3 (148-216)||(36331339-36331407)
chr3 (260-304)||(48375628-48375672)
[»] chr1 (49 HSPs)
chr1 (124-220)||(38595152-38595248)
chr1 (126-220)||(27564741-27564835)
chr1 (124-220)||(2581913-2582009)
chr1 (126-220)||(3000319-3000413)
chr1 (122-220)||(38632327-38632425)
chr1 (124-220)||(8346394-8346490)
chr1 (125-220)||(51898689-51898784)
chr1 (126-220)||(9474882-9474976)
chr1 (126-220)||(48716288-48716382)
chr1 (129-220)||(44548382-44548473)
chr1 (125-220)||(50630457-50630552)
chr1 (250-309)||(27564652-27564711)
chr1 (250-304)||(37649322-37649376)
chr1 (126-220)||(47452326-47452420)
chr1 (250-304)||(48716204-48716258)
chr1 (126-220)||(43132-43226)
chr1 (250-304)||(41758929-41758983)
chr1 (124-216)||(5959010-5959102)
chr1 (124-220)||(32813245-32813341)
chr1 (126-220)||(37649198-37649292)
chr1 (125-220)||(41758804-41758899)
chr1 (131-220)||(44453984-44454073)
chr1 (250-310)||(9474792-9474852)
chr1 (250-294)||(38632253-38632297)
chr1 (250-309)||(26274553-26274612)
chr1 (250-304)||(32813371-32813425)
chr1 (254-304)||(47452242-47452292)
chr1 (126-216)||(50591010-50591100)
chr1 (167-220)||(13414802-13414855)
chr1 (127-219)||(11152385-11152476)
chr1 (124-216)||(26274430-26274522)
chr1 (250-309)||(43256-43315)
chr1 (126-220)||(3302539-3302633)
chr1 (250-304)||(50630582-50630636)
chr1 (125-194)||(37926470-37926539)
chr1 (257-309)||(38595285-38595337)
chr1 (148-220)||(45044566-45044638)
chr1 (250-309)||(2582039-2582098)
chr1 (257-304)||(3000450-3000497)
chr1 (250-304)||(49811449-49811503)
chr1 (254-304)||(51898605-51898655)
chr1 (126-191)||(41608528-41608593)
chr1 (124-220)||(49811533-49811629)
chr1 (124-194)||(23597123-23597193)
chr1 (169-220)||(48489343-48489394)
chr1 (250-304)||(8346309-8346363)
chr1 (250-296)||(37926368-37926414)
chr1 (166-220)||(44334176-44334230)
chr1 (250-304)||(45044482-45044536)
[»] chr8 (51 HSPs)
chr8 (126-220)||(504127-504221)
chr8 (124-220)||(14547920-14548016)
chr8 (125-220)||(37038478-37038573)
chr8 (126-220)||(12831047-12831141)
chr8 (126-220)||(15197333-15197427)
chr8 (126-220)||(23122603-23122697)
chr8 (126-220)||(34012302-34012396)
chr8 (126-220)||(40423949-40424043)
chr8 (250-311)||(14548046-14548107)
chr8 (250-319)||(34012203-34012272)
chr8 (250-304)||(504043-504097)
chr8 (126-220)||(1179946-1180040)
chr8 (250-304)||(23122519-23122573)
chr8 (125-218)||(44507095-44507188)
chr8 (127-220)||(5957831-5957924)
chr8 (124-220)||(10284637-10284733)
chr8 (124-189)||(24307627-24307692)
chr8 (148-220)||(8841438-8841510)
chr8 (250-310)||(42710210-42710270)
chr8 (120-191)||(34307210-34307281)
chr8 (250-304)||(12831171-12831225)
chr8 (124-189)||(24307830-24307895)
chr8 (123-220)||(42221512-42221609)
chr8 (124-216)||(16383375-16383467)
chr8 (250-304)||(9122309-9122363)
chr8 (126-220)||(15048188-15048281)
chr8 (250-304)||(40423865-40423919)
chr8 (250-304)||(43414503-43414557)
chr8 (252-313)||(15197459-15197520)
chr8 (250-304)||(1179862-1179916)
chr8 (170-220)||(9122229-9122279)
chr8 (125-191)||(32032724-32032789)
chr8 (131-220)||(10621093-10621182)
chr8 (124-216)||(16056411-16056503)
chr8 (254-304)||(5957958-5958008)
chr8 (254-304)||(8841354-8841404)
chr8 (250-296)||(15048111-15048157)
chr8 (254-304)||(37038607-37038657)
chr8 (254-304)||(42354510-42354560)
chr8 (126-220)||(43414587-43414681)
chr8 (250-304)||(44507010-44507063)
chr8 (126-191)||(30479509-30479574)
chr8 (148-220)||(15258935-15259007)
chr8 (250-304)||(4854785-4854839)
chr8 (254-304)||(10284553-10284603)
chr8 (250-304)||(16056323-16056377)
chr8 (125-215)||(17443824-17443914)
chr8 (250-304)||(24307715-24307769)
chr8 (250-304)||(32707925-32707979)
chr8 (126-194)||(20074966-20075034)
chr8 (124-220)||(4854869-4854965)
[»] chr7 (59 HSPs)
chr7 (126-220)||(19329842-19329936)
chr7 (129-220)||(3783998-3784089)
chr7 (125-220)||(36361919-36362014)
chr7 (124-220)||(7389387-7389483)
chr7 (125-220)||(36362025-36362120)
chr7 (124-220)||(8080389-8080485)
chr7 (126-220)||(4999520-4999614)
chr7 (126-220)||(35137533-35137627)
chr7 (126-220)||(38267040-38267134)
chr7 (250-311)||(19329966-19330027)
chr7 (124-220)||(19436193-19436289)
chr7 (124-220)||(38837215-38837311)
chr7 (125-220)||(3434561-3434656)
chr7 (129-220)||(3694370-3694461)
chr7 (254-309)||(8080300-8080355)
chr7 (250-304)||(3434676-3434730)
chr7 (250-311)||(38837341-38837402)
chr7 (124-220)||(40957705-40957801)
chr7 (124-220)||(36208171-36208267)
chr7 (250-309)||(4999431-4999490)
chr7 (125-216)||(22343360-22343451)
chr7 (127-220)||(32951499-32951592)
chr7 (123-216)||(38044194-38044287)
chr7 (250-310)||(36362138-36362198)
chr7 (250-310)||(40957831-40957891)
chr7 (126-216)||(8238212-8238303)
chr7 (250-309)||(32951410-32951469)
chr7 (250-304)||(46374746-46374800)
chr7 (250-299)||(19436114-19436163)
chr7 (250-310)||(7389513-7389572)
chr7 (124-192)||(10343597-10343665)
chr7 (250-309)||(36361842-36361901)
chr7 (125-216)||(41915740-41915831)
chr7 (250-304)||(35523000-35523054)
chr7 (250-304)||(46033723-46033777)
chr7 (126-220)||(46374808-46374902)
chr7 (124-216)||(7727904-7727996)
chr7 (124-220)||(18207178-18207273)
chr7 (124-199)||(45223040-45223115)
chr7 (250-309)||(11044302-11044361)
chr7 (250-304)||(2318163-2318217)
chr7 (250-304)||(16374746-16374800)
chr7 (126-220)||(21234401-21234495)
chr7 (250-304)||(21234525-21234579)
chr7 (250-296)||(31736001-31736047)
chr7 (254-304)||(41423810-41423860)
chr7 (124-216)||(11044186-11044268)
chr7 (126-191)||(32564461-32564526)
chr7 (126-215)||(40846124-40846213)
chr7 (156-220)||(16374830-16374894)
chr7 (124-220)||(35468861-35468957)
chr7 (149-208)||(2318261-2318320)
chr7 (250-309)||(35137657-35137716)
chr7 (250-304)||(38044321-38044375)
chr7 (148-218)||(46033809-46033879)
chr7 (263-304)||(12311041-12311082)
chr7 (131-220)||(35522881-35522970)
chr7 (263-304)||(39255846-39255887)
chr7 (126-194)||(39255955-39256023)
[»] chr6 (32 HSPs)
chr6 (126-220)||(17598554-17598648)
chr6 (126-220)||(32869678-32869772)
chr6 (129-220)||(22880664-22880755)
chr6 (125-220)||(11427615-11427712)
chr6 (119-220)||(23128133-23128234)
chr6 (126-220)||(29857827-29857921)
chr6 (250-320)||(29857951-29858021)
chr6 (250-316)||(32869802-32869868)
chr6 (124-220)||(6209471-6209567)
chr6 (250-309)||(11427742-11427801)
chr6 (124-215)||(15832575-15832666)
chr6 (250-312)||(17598678-17598740)
chr6 (250-304)||(15832701-15832755)
chr6 (126-212)||(31109414-31109500)
chr6 (124-216)||(15990052-15990144)
chr6 (250-310)||(22880574-22880634)
chr6 (124-216)||(30341370-30341462)
chr6 (130-220)||(28536494-28536582)
chr6 (126-216)||(15508034-15508124)
chr6 (125-220)||(31976247-31976342)
chr6 (250-304)||(31976372-31976426)
chr6 (124-220)||(31110767-31110861)
chr6 (138-216)||(4231560-4231638)
chr6 (250-304)||(31110683-31110737)
chr6 (126-220)||(31953036-31953130)
chr6 (250-309)||(23128043-23128103)
chr6 (250-309)||(6209383-6209441)
chr6 (250-304)||(4231672-4231726)
chr6 (124-194)||(12732480-12732550)
chr6 (262-304)||(22422001-22422043)
chr6 (125-191)||(22422053-22422119)
chr6 (254-304)||(31952952-31953002)
[»] chr5 (40 HSPs)
chr5 (124-220)||(13811650-13811746)
chr5 (124-220)||(18520890-18520986)
chr5 (122-220)||(36732948-36733046)
chr5 (125-220)||(2740273-2740368)
chr5 (126-220)||(35785199-35785293)
chr5 (126-220)||(40145407-40145501)
chr5 (126-220)||(42414308-42414402)
chr5 (125-220)||(6679697-6679792)
chr5 (126-220)||(14831814-14831908)
chr5 (126-220)||(33149644-33149738)
chr5 (126-220)||(35943898-35943992)
chr5 (250-318)||(2740398-2740467)
chr5 (250-319)||(33149545-33149614)
chr5 (250-313)||(14831938-14832001)
chr5 (124-220)||(15409616-15409712)
chr5 (124-220)||(31008986-31009082)
chr5 (126-220)||(28177775-28177869)
chr5 (250-304)||(35785323-35785377)
chr5 (127-220)||(16327902-16327995)
chr5 (124-216)||(3921275-3921367)
chr5 (250-310)||(18520800-18520860)
chr5 (125-217)||(41470425-41470517)
chr5 (250-296)||(36732872-36732918)
chr5 (124-189)||(39688934-39688999)
chr5 (250-311)||(40145531-40145592)
chr5 (125-216)||(2252178-2252269)
chr5 (250-300)||(13811776-13811826)
chr5 (250-304)||(15409532-15409586)
chr5 (254-304)||(31009116-31009166)
chr5 (250-304)||(31132458-31132512)
chr5 (262-311)||(16115247-16115296)
chr5 (174-218)||(31132392-31132436)
chr5 (126-220)||(20073522-20073616)
chr5 (254-304)||(35943814-35943864)
chr5 (127-185)||(36875644-36875702)
chr5 (149-209)||(39557534-39557594)
chr5 (131-189)||(10356639-10356698)
chr5 (170-220)||(21370048-21370098)
chr5 (126-220)||(26720516-26720610)
chr5 (126-220)||(26990265-26990359)
[»] chr2 (56 HSPs)
chr2 (124-220)||(10249388-10249484)
chr2 (125-220)||(32505654-32505749)
chr2 (126-220)||(13438343-13438437)
chr2 (124-220)||(9058478-9058574)
chr2 (124-220)||(33436106-33436202)
chr2 (129-220)||(28863458-28863549)
chr2 (126-220)||(40701478-40701572)
chr2 (125-220)||(7465741-7465836)
chr2 (126-220)||(17473020-17473114)
chr2 (126-220)||(27864704-27864798)
chr2 (126-220)||(28381661-28381755)
chr2 (122-220)||(30915459-30915557)
chr2 (125-220)||(5574494-5574589)
chr2 (250-312)||(7465649-7465711)
chr2 (124-220)||(42257191-42257287)
chr2 (129-220)||(19930826-19930917)
chr2 (126-220)||(4060685-4060779)
chr2 (250-304)||(5574422-5574476)
chr2 (250-304)||(10249304-10249358)
chr2 (250-304)||(13438467-13438521)
chr2 (250-304)||(17473144-17473198)
chr2 (250-304)||(28863579-28863633)
chr2 (250-311)||(19930735-19930796)
chr2 (124-220)||(20700813-20700909)
chr2 (254-304)||(20700943-20700993)
chr2 (250-304)||(38882733-38882787)
chr2 (126-220)||(40613908-40614002)
chr2 (251-304)||(32505570-32505623)
chr2 (124-209)||(38882831-38882915)
chr2 (251-304)||(40613824-40613877)
chr2 (257-309)||(28381572-28381624)
chr2 (250-309)||(40701602-40701661)
chr2 (126-216)||(38732354-38732444)
chr2 (124-220)||(26891510-26891606)
chr2 (124-216)||(45097745-45097837)
chr2 (125-220)||(2533123-2533217)
chr2 (250-309)||(4060809-4060868)
chr2 (250-309)||(27864815-27864874)
chr2 (125-220)||(33436210-33436305)
chr2 (142-220)||(3439995-3440073)
chr2 (250-304)||(9058604-9058658)
chr2 (126-220)||(17820010-17820104)
chr2 (250-304)||(30915587-30915641)
chr2 (250-304)||(33436022-33436076)
chr2 (126-216)||(43490121-43490211)
chr2 (252-292)||(2533249-2533289)
chr2 (124-196)||(17823782-17823854)
chr2 (148-220)||(38273148-38273220)
chr2 (169-220)||(3737986-3738037)
chr2 (250-304)||(36168960-36169014)
chr2 (250-299)||(42257317-42257366)
chr2 (148-216)||(2997497-2997565)
chr2 (260-304)||(3440113-3440157)
chr2 (124-216)||(13365349-13365443)
chr2 (257-304)||(17823919-17823966)
chr2 (125-218)||(36168835-36168928)
[»] chr4 (52 HSPs)
chr4 (126-220)||(41236347-41236441)
chr4 (124-220)||(42044373-42044469)
chr4 (124-220)||(48183055-48183151)
chr4 (124-220)||(50052434-50052530)
chr4 (126-220)||(11511468-11511562)
chr4 (124-220)||(480453-480549)
chr4 (126-220)||(3481654-3481748)
chr4 (126-220)||(6034044-6034138)
chr4 (126-220)||(54473539-54473633)
chr4 (123-220)||(24995113-24995210)
chr4 (124-220)||(29239884-29239980)
chr4 (250-309)||(41236471-41236530)
chr4 (126-219)||(50526178-50526271)
chr4 (124-220)||(23608233-23608329)
chr4 (125-220)||(29234251-29234346)
chr4 (251-309)||(24995024-24995082)
chr4 (250-311)||(42044282-42044343)
chr4 (251-304)||(48182971-48183024)
chr4 (250-304)||(6034168-6034222)
chr4 (124-191)||(29547994-29548061)
chr4 (125-216)||(47986207-47986298)
chr4 (254-304)||(29240014-29240064)
chr4 (170-220)||(41823926-41823976)
chr4 (126-191)||(55079749-55079814)
chr4 (124-216)||(19670726-19670818)
chr4 (250-310)||(23608359-23608419)
chr4 (124-220)||(29977883-29977979)
chr4 (126-220)||(31910192-31910286)
chr4 (124-191)||(55475189-55475256)
chr4 (250-304)||(54473455-54473509)
chr4 (123-191)||(32766955-32767023)
chr4 (124-220)||(48647732-48647828)
chr4 (261-304)||(50052350-50052393)
chr4 (125-216)||(50813902-50813993)
chr4 (261-304)||(53352496-53352539)
chr4 (131-218)||(53352574-53352660)
chr4 (251-309)||(11511380-11511437)
chr4 (250-304)||(31910316-31910370)
chr4 (250-304)||(41824006-41824060)
chr4 (125-191)||(44536781-44536846)
chr4 (254-304)||(50526093-50526143)
chr4 (126-191)||(8343198-8343263)
chr4 (148-216)||(17983753-17983821)
chr4 (126-193)||(40574779-40574846)
chr4 (257-296)||(40574910-40574949)
chr4 (250-304)||(19670638-19670692)
chr4 (250-304)||(29547881-29547935)
chr4 (250-304)||(55475315-55475369)
chr4 (250-291)||(480382-480423)
chr4 (148-220)||(28480274-28480346)
chr4 (148-220)||(28481149-28481221)
chr4 (148-220)||(28482024-28482096)
[»] scaffold0321 (2 HSPs)
scaffold0321 (124-220)||(10115-10211)
scaffold0321 (250-310)||(10025-10085)
[»] scaffold0237 (2 HSPs)
scaffold0237 (126-220)||(4029-4123)
scaffold0237 (250-311)||(4153-4214)
[»] scaffold1268 (2 HSPs)
scaffold1268 (126-220)||(935-1029)
scaffold1268 (254-304)||(851-901)
[»] scaffold1267 (2 HSPs)
scaffold1267 (126-220)||(935-1029)
scaffold1267 (254-304)||(851-901)
[»] scaffold0316 (2 HSPs)
scaffold0316 (149-220)||(17077-17148)
scaffold0316 (261-304)||(17238-17281)
[»] scaffold0250 (1 HSPs)
scaffold0250 (50-125)||(6483-6560)
[»] scaffold0018 (1 HSPs)
scaffold0018 (139-191)||(152511-152563)
[»] scaffold0110 (1 HSPs)
scaffold0110 (257-304)||(8785-8832)


Alignment Details
Target: chr3 (Bit Score: 127; Significance: 2e-65; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 309 - 443
Target Start/End: Original strand, 52824040 - 52824174
Alignment:
Q  309 tttgtttattgtcaggaagatagagcgattgtgtgcaaagagtgtgatttgaaggttcatggtgtcaacgaacacaccaagaagcataataggtttcttc 408  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  52824040 tttgttttttgtcaggaagatagagcgattgtgtgcaaagagtgtgatttgaaggttcacggtgtcaacgaacacaccaagaagcataataggtttcttc 52824139  T
Q  409 taagtgggatcaagctgcactctcctgctcctcct 443  Q
    |||||||||||||||||||||||||||||||||||    
T  52824140 taagtgggatcaagctgcactctcctgctcctcct 52824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 17470404 - 17470499
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 17470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 27714995 - 27714897
Alignment:
Q  122 agaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||||| ||| |||||||||||||| |||||| |  ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  27714995 agaagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 27714897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 53982011 - 53982105
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53982105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 54868997 - 54868901
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 54868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 8076393 - 8076487
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||||||||| |||||||||| |||| |  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8076487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 33644200 - 33644294
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| || |||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 33644294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 49607412 - 49607508
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  49607412 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 49607508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 52629305 - 52629394
Alignment:
Q  131 atgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 52629394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 31456690 - 31456783
Alignment:
Q  127 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||| ||| |||||  |||| ||||||||| |  ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 33644324 - 33644385
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  33644324 ctaatgcatggggtgtataagggtgtatgggaataaagggtgtctatgtatcattactcttt 33644385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 11095455 - 11095377
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgt 202  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt 11095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 53982135 - 53982189
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  53982135 ctaatgcatggggtgtacaaggttgtatgggaataaagggtgtctatgtatcatt 53982189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 48587077 - 48587016
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 311  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  48587077 ctaatgcatgggatgtacaagggtatatgggaataaagggtgtctatgtatcattactcttt 48587016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 11095343 - 11095283
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 310  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  11095343 ctaatgcatcgggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactctt 11095283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 31456813 - 31456867
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  31456813 ctaatgcatggggtgtacaagggtgcatgggaataaagggtgtttatgtatcatt 31456867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 49607538 - 49607592
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  49607538 ctaatgcatgacgtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 49607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 13898154 - 13898061
Alignment:
Q  127 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||| ||||||| | ||||||||||||||| |  |||||||||||| |||||||||||||||  ||| ||||||| | ||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcaca 13898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 52629424 - 52629485
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 311  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  52629424 ctaatgcatgggatgtacaagggtgtatggaaataatgggtgtctatgtatcattactcttt 52629485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 54868871 - 54868810
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 311  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  54868871 ctaatgcatagggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactcttt 54868810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 41189866 - 41189770
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| ||| ||| | |||||||||||||||||  |||||||||||| |||||| ||||||||   ||| |||||||||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcaca 41189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 11347898 - 11347844
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||| ||||    
T  11347898 ctaatgtatggggtgtataagggtgtatgggaataaagggtgtctatgtaccatt 11347844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 26141632 - 26141538
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  || |||||||||||||||||||||||||  |||| |||||||| ||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcaca 26141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 48587187 - 48587101
Alignment:
Q  130 aatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    ||||||| ||| | ||| ||||||||||||||| |  |||||||| ||| |||||||||||||||| ||||||||| ||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaag 48587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 33118953 - 33118872
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtgga 205  Q
    |||||| |||||| ||| ||||| ||||||| ||||||| |  ||||||||||||||||||| ||||||||| |||||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtgga 33118872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 9562998 - 9563093
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||||||||| |||| || ||||||| |  |||||| ||| | |||||||||||||||| ||||||||| || |||||| ||||    
T  9562998 agagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacaca 9563093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 36707526 - 36707439
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgc 211  Q
    ||||||||||||| ||| | ||| ||||||| ||||||| |  |||||| |||||||||||||||||||||| | ||||||| |||||    
T  36707526 aagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 9563123 - 9563177
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||| | ||||||| |||||||||||||||||||| |||||||||||||    
T  9563123 ctaatgcatgagttgtacaaaggtgtatgggaataaagggtatctatgtatcatt 9563177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 14623939 - 14623845
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||| | ||||||||||||||| |  |||||||||||| |||||||||||| ||  ||| ||||||| | ||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcaca 14623845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 20764891 - 20764837
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  20764891 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 20764837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 26141506 - 26141452
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  26141506 ctaatgtatggggtgtacaagagtgtatggaaataaagggtgtctatgtaacatt 26141452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 26754711 - 26754789
Alignment:
Q  142 acacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||| ||||||||||||||| |  | |||| |||||||||||||||||| ||  |||| |||||||||||||||||||    
T  26754711 acacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 33118822 - 33118772
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  33118822 tgcatggggtgtacaagggtgtatggaaataaagggtgtctacgtaacatt 33118772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 36707404 - 36707350
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||| ||||||||||  |||||||||||||| |||||||||||||||||    
T  36707404 ctaatgcatgaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcatt 36707350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 45058652 - 45058563
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||| |||||| ||||||||| ||||||||||||||| |  |||||||||||| |||||||||||| || | ||  |||||||||||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaag 45058563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 11348024 - 11347928
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| ||| ||| | ||||||| |||||||||  |||||| |||||||||||||||||||||   ||| ||||||| ||| |||||||    
T  11348024 aagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcaca 11347928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 30801703 - 30801655
Alignment:
Q  256 catggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  30801703 catggggtgtacaagggtgtatgagaataaaaggtgtctatgtaacatt 30801655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 8956761 - 8956856
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||| | ||| |||||||||||||  |||||||||||| |||||| ||||||||  ||| |||||||   ||||||||||    
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcaca 8956856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 24700055 - 24699972
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccc 208  Q
    |||||||||||| ||| ||| | |||| |||||||||| || |||||||||||| ||||||||| |||||   |||||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccc 24699972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 35536754 - 35536804
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||| ||||    
T  35536754 tgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacatt 35536804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 41189740 - 41189686
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||| ||||||||| |||||||| ||||||||||||||||||| ||||    
T  41189740 ctaatgtatggagtgtacaagagtgtatggaaataaagggtgtctatgtaacatt 41189686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 51419336 - 51419282
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| ||||||||||||||||||||||| |||||| ||||| |||||| ||||    
T  51419336 ctaatgtatggggtgtacaagggtgtatggaaataaaaggtgtttatgtaacatt 51419282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 51419460 - 51419366
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||| | |||| || |||||||||  || |||||||||||||||||||||||||   ||| | |||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcaca 51419366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 35965757 - 35965704
Alignment:
Q  251 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||| |||| |||||||||||||||||| ||||||| |||||||||||| ||||    
T  35965757 taattcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgtaacatt 35965704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 27714873 - 27714825
Alignment:
Q  256 catggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||| | |||||||| |||| |||||||||||    
T  27714873 catggggtgtacaagggtgtacgagaataaagagtgtatatgtatcatt 27714825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 17470529 - 17470588
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    |||||||||||| |||||||   |||||| ||||||| ||||||||||||||||| ||||    
T  17470529 ctaatgcatgggatgtacaaatatgtatgagaataaatggtgtctatgtatcattactct 17470588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 35536625 - 35536720
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||| | ||| ||||||||||| |  |||||||||||| |||||| ||||||||  ||| |||||||   ||||||||||    
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcaca 35536720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 8076521 - 8076571
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||  ||||||| ||||||| |||||||||||| ||||    
T  8076521 tgcatggggtgtacaaaagtgtatgagaataaatggtgtctatgtaacatt 8076571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 20764971 - 20764921
Alignment:
Q  170 acacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||||||||||||||||   ||| ||||||||| |||||||||    
T  20764971 acacccacacaaaaatctgacacgtggccacatggaccccgtacaagcaca 20764921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 21746284 - 21746211
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgaca--cccacacaaaaatctgacacgtaa 196  Q
    |||||||||||| ||| ||| | ||||||||||||||||   | ||||  ||||||||||||||||||||||||    
T  21746284 agagtaatgatacatatacatccttaggtggcaatacattcctggacacccccacacaaaaatctgacacgtaa 21746211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 30801829 - 30801739
Alignment:
Q  130 aatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||| ||| ||||| |||||||  |||||| |  |||| |||||||||||||| ||||| ||| |||  |||||||| ||||||||||    
T  30801829 aatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcaca 30801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 35965876 - 35965806
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgt 194  Q
    ||||||||||||| ||| ||| | ||| |||  ||||||||  |||||||||||| |||||||||||||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgt 35965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 47531989 - 47532043
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| ||||  |||||||| ||||||||||||||||||||| |||||| ||||    
T  47531989 ctaatgtatggaatgtacaagtgtgtatgggaataaagggtgtttatgtaacatt 47532043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 26754829 - 26754873
Alignment:
Q  260 gggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||| ||||||||| ||||||| ||||||||||| ||||    
T  26754829 gggtgtacaaaggtgtatggaaataaagagtgtctatgtaacatt 26754873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 36331407 - 36331339
Alignment:
Q  148 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||||||||||| || |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 36331339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 48375672 - 48375628
Alignment:
Q  260 gggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  48375672 gggtgtacaaagatgtatggaaataaagggtgtctatgtaacatt 48375628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 4e-33; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 38595152 - 38595248
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  38595152 aagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 27564835 - 27564741
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||| | ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 27564741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 2581913 - 2582009
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2581913 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 2582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 3000319 - 3000413
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 3000413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 38632425 - 38632327
Alignment:
Q  122 agaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||||| ||| ||||| ||||||||||||||| || || ||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  38632425 agaagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 8346490 - 8346394
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| |||  |||||||||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  8346490 aagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 51898784 - 51898689
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||| ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 51898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 9474976 - 9474882
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacaca 9474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 48716382 - 48716288
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 44548473 - 44548382
Alignment:
Q  129 taatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||| ||| ||| ||||||||||||||||| |  |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 44548382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 50630457 - 50630552
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| | ||| |||||||||||||||||  |||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 27564711 - 27564652
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27564711 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 27564652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 37649322 - 37649376
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37649322 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 37649376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 47452420 - 47452326
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| |||||||| |||||| |  ||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcaca 47452326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 48716258 - 48716204
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48716258 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 48716204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 43132 - 43226
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| |||   ||||| | |||||||||  ||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcaca 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 41758929 - 41758983
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41758929 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 41758983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 5959102 - 5959010
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||||| |||||| ||||||||| ||| ||||||||||| || ||||||||||||||||||||||||| ||  |||  |||||||||||||||    
T  5959102 aagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 5959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 32813245 - 32813341
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| ||| ||| | ||||||||||||||| |  || |||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  32813245 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcaca 32813341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 37649198 - 37649292
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||| |  |||||||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactct-ttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 41758804 - 41758899
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||||| |||  |||||||||| |  |||||| |||||||||||||||||||||| |||| |||||||||||||| ||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacaca 41758899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 44453984 - 44454073
Alignment:
Q  131 atgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| ||| ||||||||| |||||||||||||| |||| |||||||||||||||||||| ||  | ||||||| ||| ||||||||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcaca 44454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 9474852 - 9474792
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 310  Q
    |||||||||||| |||||||||||||||| |||||||| |||||||||||||||| |||||    
T  9474852 ctaatgcatgggatgtacaagggtgtatgagaataaagagtgtctatgtatcattactctt 9474792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 38632297 - 38632253
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtct 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  38632297 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtct 38632253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 26274553 - 26274612
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    |||||||||| | || ||||||||||||||||||||||||||||||||||||||| ||||    
T  26274553 ctaatgcatgagatgcacaagggtgtatgggaataaagggtgtctatgtatcattactct 26274612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 32813371 - 32813425
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  32813371 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacatt 32813425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 47452292 - 47452242
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  47452292 tgcatggggtgtacaaggatgtatgggaataaagagtgtctatgtatcatt 47452242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 50591100 - 50591010
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 50591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 13414802 - 13414855
Alignment:
Q  167 ttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  13414802 ttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 11152476 - 11152385
Alignment:
Q  127 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcac 219  Q
    |||||||| | ||| ||||||| ||||||||||||| |  | |||| |||||||||||||||||||||| ||| || ||||||||||||||||    
T  11152476 agtaatgaaacatagacacctt-aggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 26274430 - 26274522
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||| |||||||| ||| ||||| ||| |||||||||||||  |||||| ||||| ||||||||||||| || ||||||||| || |||||||    
T  26274430 aagaataatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaag 26274522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 43256 - 43315
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||| ||||    
T  43256 ctaatgcatggggtgtacaagagtgtataagaataaagggtatctatgtatcattactct 43315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 3302633 - 3302539
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||| | ||||||| ||||| ||   | |||||||||||||||||||||||||||||||  ||||||||  |||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 3302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 50630582 - 50630636
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||    
T  50630582 ctaatgcatagggtgtacaagggtgtatgagaataaatggtgtctatgcatcatt 50630636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 37926539 - 37926470
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgt 194  Q
    ||||| |||||| ||| | | |||||||||||||||||||| || ||||||||| |||||||||||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgt 37926470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 38595285 - 38595337
Alignment:
Q  257 atggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||| ||||    
T  38595285 atggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactct 38595337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 45044638 - 45044566
Alignment:
Q  148 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||||| |  |||||||||| |||||||||||||| |||  ||| |||||||||||||| ||||    
T  45044638 ttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacaca 45044566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 2582039 - 2582098
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||| |||| |||||||||||||||||  ||||||||||||| ||||||||||| ||||    
T  2582039 ctaatacatgaggtgtacaagggtgtattagaataaagggtgtttatgtatcattactct 2582098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 3000450 - 3000497
Alignment:
Q  257 atggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||||    
T  3000450 atggggtgtacaagggtgtatggaaataatggatgtctatgtatcatt 3000497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 49811503 - 49811449
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| ||| |||| ||||||||||||| |||||||||||||||||||| ||||    
T  49811503 ctaatgtatgtggtgcacaagggtgtatgagaataaagggtgtctatgtaacatt 49811449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 51898655 - 51898605
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||||| | |||||||||||| |||||| ||||    
T  51898655 tgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 51898605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 41608593 - 41608528
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    |||| |||||| ||||||| | ||||||||||||||| |  ||||||| |||||||||||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 41608528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 49811629 - 49811533
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| ||| ||| | ||||||| ||||||| |  |||||| ||||||||||||||||||||||  ||  | ||| |||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcaca 49811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 23597193 - 23597123
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgt 194  Q
    ||||||||||||| ||| ||| | ||||||||||||||| ||| |||| ||||||| |||||||||||||||    
T  23597193 aagagtaatgatacatagacatcattaggtggcaatacactct-ttgatacccacataaaaatctgacacgt 23597123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 48489343 - 48489394
Alignment:
Q  169 gacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||||||||||||||| ||  ||||||||| ||||||||||||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcaca 48489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 8346363 - 8346309
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||| |||||||| |||||||| ||||||| ||| | |||||||||||    
T  8346363 ctaatgcatggagtgtacaaaggtgtatgagaataaatggtatttatgtatcatt 8346309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 37926414 - 37926368
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctat 296  Q
    |||||| ||||||||||||||| |||||| ||||||| |||||||||    
T  37926414 ctaatgtatggggtgtacaaggatgtatgtgaataaatggtgtctat 37926368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 44334230 - 44334176
Alignment:
Q  166 attgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||| ||||||||||| |||||||||| |||| ||||||| |||||| ||||    
T  44334230 attgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacaca 44334176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 45044536 - 45044482
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||||||||||||||||||||| ||||||| | |||||| ||| ||||    
T  45044536 ctaatgtatggggtgtacaagggtgtatgagaataaatgatgtctacgtaacatt 45044482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 6e-32; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 504221 - 504127
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 14547920 - 14548016
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||| |||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14547920 aagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 14548016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 37038478 - 37038573
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||| ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 37038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 12831047 - 12831141
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||| ||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 12831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 15197333 - 15197427
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||  ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 15197427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 23122697 - 23122603
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 23122603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 34012396 - 34012302
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| |||||||| |||||| |  ||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 34012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 40424043 - 40423949
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| | ||| ||||||||||||||| |  |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 40423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 14548046 - 14548107
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 311  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  14548046 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactcttt 14548107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 34012272 - 34012203
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttgtttattg 319  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||    
T  34012272 ctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcattactctttttttattg 34012203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 504097 - 504043
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  504097 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 504043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 1180040 - 1179946
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| |||||||| |||||| |  ||||||||||||||||||||||||||||| ||| |||||  |||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcaca 1179946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 23122573 - 23122519
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23122573 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 23122519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 44507188 - 44507095
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagca 218  Q
    |||||||||||| ||| ||||| |||||||| |||||| ||| || |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactct-ttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagca 44507095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 5957831 - 5957924
Alignment:
Q  127 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||| ||| |||   ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 10284733 - 10284637
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| ||| ||||| ||| ||| ||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  10284733 aagagttatgatacatagacacccttaagtgacaatacactct-ttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcaca 10284637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 24307627 - 24307692
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctga 189  Q
    |||||| |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  24307627 aagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 8841510 - 8841438
Alignment:
Q  148 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||| |||| |  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  8841510 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 42710270 - 42710210
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 310  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  42710270 ctaatgtatggggtgtacaagggtgtatgggaataaagggtgtctgtgtatcattactctt 42710210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 34307210 - 34307281
Alignment:
Q  120 ttagaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| |  |||||||||||||||||||||||||    
T  34307210 ttagaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 12831171 - 12831225
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  12831171 ctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgtatcatt 12831225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 24307895 - 24307830
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctga 189  Q
    |||||| |||||| ||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctga 24307830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 42221512 - 42221609
Alignment:
Q  123 gaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||||| ||| ||| | ||||||| ||||||||   | |||||||||||||||||||||||||||||||  ||||||||  |||||||||    
T  42221512 gaagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 42221609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 16383375 - 16383467
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  16383375 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16383467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 9122309 - 9122363
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||    
T  9122309 ctaatgcatggggtgtacaagagtgtatgggaataaagaatgtctatgtatcatt 9122363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 15048281 - 15048188
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  |||||||| ||||||||||||||||||||  ||| |||||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15048188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 40423919 - 40423865
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  40423919 ctaatacatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcatt 40423865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 43414557 - 43414503
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  43414557 ctaatgtatggggtgtacaagggtgtatggcaataaagggtgtctatgtaacatt 43414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 15197459 - 15197520
Alignment:
Q  252 aatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttgt 313  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||||||||| ||| ||||    
T  15197459 aatgcatgaggtgtacaagggtgtatgggaataaaaagtgtctatgtatcattactcgttgt 15197520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 1179916 - 1179862
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||| |||||||    
T  1179916 ctaatgcatggggtgtacaaggatatatgggaataaaggatgtctatctatcatt 1179862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 9122229 - 9122279
Alignment:
Q  170 acacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 9122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 32032724 - 32032789
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    ||||| |||||| ||||||||| |||||||||||||||||  |||||| ||||||||||||||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatc-cttgacatccacacaaaaatctgaca 32032789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 10621182 - 10621093
Alignment:
Q  131 atgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| ||| ||| | |||||||| |||||| |  |||||||||||||||||||||||||||||  ||| | || ||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcaca 10621093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 16056503 - 16056411
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||||| |||||| ||||||| | ||| ||| |||||||||  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  16056503 aagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16056411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 5957958 - 5958008
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||| ||||    
T  5957958 tgcatgaggtgtacaagggtgtatgagaataaagggtgtttatgtaacatt 5958008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 8841404 - 8841354
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||| ||||    
T  8841404 tgcatggggtgtacaagagtgtatgagaataaatggtgtctatgtaacatt 8841354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 15048157 - 15048111
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctat 296  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  15048157 ctaatgtatgggatgtacaagggtgtatcggaataaagggtgtctat 15048111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 37038607 - 37038657
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||||| | |||||||||||| |||||| ||||    
T  37038607 tgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 37038657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 42354560 - 42354510
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||| ||||    
T  42354560 tgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacatt 42354510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 43414681 - 43414587
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||| | |||| |||||| ||| |  ||||||||||||||||||||| ||||||  |||| |||| ||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 44507063 - 44507010
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||||||    
T  44507063 ctaatgcatggggtgtacaagggtgtatgagaataaa-tatgtctatgtatcatt 44507010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 30479574 - 30479509
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    |||| |||||| ||||||||| ||||||||||||||| |  |||||| ||||| ||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 15259007 - 15258935
Alignment:
Q  148 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| ||||||||||||  | |||| ||||| |||||||||||| ||  |||||||||||| |||||||||||    
T  15259007 ttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcaca 15258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 4854839 - 4854785
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| ||||| ||||||||||| |||| |||||||| ||||||||||| ||||    
T  4854839 ctaatgtatgggatgtacaagggtatatgagaataaagagtgtctatgtaacatt 4854785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 10284603 - 10284553
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||| ||||    
T  10284603 tgcatggggtgtacaaggttgtataagaataaaaggtgtctatgtaacatt 10284553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 16056377 - 16056323
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  16056377 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 16056323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 215
Target Start/End: Original strand, 17443824 - 17443914
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaa 215  Q
    ||||| |||||| ||| ||| | ||||||| |||||||  | || |||| ||||||||||||||||| ||| ||| ||||||||| |||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaa 17443914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 24307769 - 24307715
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  24307769 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 24307715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 32707979 - 32707925
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  32707979 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 32707925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 20075034 - 20074966
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgt 194  Q
    ||||||||||| ||| ||| | ||||||||||||||| ||| |||||||||||| |||||| ||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactct-ttgacacccacataaaaatgtgacacgt 20074966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 4854965 - 4854869
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||| | ||||||||||||||| |  || ||||| ||| |||||||||| | ||   ||| ||||||| |||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcaca 4854869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 6e-32; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 19329842 - 19329936
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||| | ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 19329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 3783998 - 3784089
Alignment:
Q  129 taatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||| ||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 3784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 36362014 - 36361919
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 7389387 - 7389483
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactct-ttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 7389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 36362025 - 36362120
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||||| |||||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36362120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 8080485 - 8080389
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  |||||||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 8080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 4999614 - 4999520
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| |||| |||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacaca 4999520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 35137533 - 35137627
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 38267040 - 38267134
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||| ||| ||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 19329966 - 19330027
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19329966 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcttt 19330027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 19436289 - 19436193
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||| | ||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcaca 19436193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 38837215 - 38837311
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  |  ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  38837215 aagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 3434561 - 3434656
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||| | ||||||||||||||| |  |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcaca 3434656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 3694370 - 3694461
Alignment:
Q  129 taatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||||| ||||||| ||||||| || || |||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcaca 3694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 8080355 - 8080300
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8080355 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 8080300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 3434676 - 3434730
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3434676 ctaatgcatggggtgtacaaggctgtatgggaataaagggtgtctatgtatcatt 3434730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 38837341 - 38837402
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 311  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  38837341 ctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcattactcttt 38837402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 40957705 - 40957801
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||  ||||||||||||||| ||| |||| |||||||||||||||||||||||| ||||||||| |||| |||||||||    
T  40957705 aagagtaatgatacatagacactcttaggtggcaatacactct-ttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcaca 40957801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 36208171 - 36208267
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| ||| ||||| |||||||| |||||||  ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcaca 36208267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 4999490 - 4999431
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  4999490 ctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcattactct 4999431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 22343360 - 22343451
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    ||||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| || | ||  |||||||||||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaag 22343451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 32951592 - 32951499
Alignment:
Q  127 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||| ||| ||||  |||| || |||||||||  || ||| |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 32951499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 38044194 - 38044287
Alignment:
Q  123 gaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    ||||||| |||||| ||||||||| ||||||||||||||| |  |||||| |||||||||||||||||| |||  ||  |||||||||||||||    
T  38044194 gaagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaag 38044287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 36362138 - 36362198
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 310  Q
    ||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  36362138 ctaatacatgggatgtacaagggtgtatgagaataaagggtgtctatgtatcattactctt 36362198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 40957831 - 40957891
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 310  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||    
T  40957831 ctaatgcatggggtgtacaagggtgtatgaaaataatgggtgtctatgtatcattactctt 40957891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 8238212 - 8238303
Alignment:
Q  126 gagtaatgatatataaacacctt-taggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||| |||||| ||||||||| | |||||||||||||| |  ||||||||||||||||||||||||| ||| |||  |||||||||||||||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaag 8238303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 32951469 - 32951410
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||    
T  32951469 ctaatacatggggtgtacaagggtgtatgagaataaggggtgtctatgtatcattactct 32951410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 46374800 - 46374746
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  46374800 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacatt 46374746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 19436163 - 19436114
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgta 299  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  19436163 ctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgta 19436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 7389513 - 7389572
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 310  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  7389513 ctaatacatggggtgtaca-gggtgtatgggaataaaggatgtctatgtatcattactctt 7389572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 10343665 - 10343597
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacac 192  Q
    ||||||||||||| ||| ||||| |||||||| ||||||  | ||||||||||||||||||||||||||    
T  10343665 aagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 36361901 - 36361842
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||| |||||  |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  36361901 ctaatacatggaatgtacaagggtgtatgagaataaagggtgtctatgtatcattactct 36361842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 41915740 - 41915831
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    ||||| |||||| ||||||||| ||||||||||||||| |  |||||||| |||||||||||||||| ||   ||  |||||||||||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaag 41915831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 35523000 - 35523054
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  35523000 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtttatgtaacatt 35523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 46033777 - 46033723
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  46033777 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 46033723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||| | ||||||||||| ||| |  || |||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 7727904 - 7727996
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||||| |||||| ||||||||| |||||||| |||||| || ||||||  |||| |||||||||||| ||  |||  |||||||||||||||    
T  7727904 aagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaag 7727996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 18207178 - 18207273
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| ||| ||| | ||||||||||||||| || |||||||||| |||||||||| ||||||   |||||| ||||| ||||||||||    
T  18207178 aagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcaca 18207273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 45223040 - 45223115
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattg-acacccacacaaaaatctgacacgtaatca 199  Q
    ||||||||||||||||| ||| | |||||||||||||||| | ||| ||| | ||||||||||||||||||||||||    
T  45223040 aagagtaatgatatatatacatccttaggtggcaatacat-tcttgaacatctacacaaaaatctgacacgtaatca 45223115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 11044302 - 11044361
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    |||||||||| ||||||||| ||||||||  ||||||| |||||||||||||||| ||||    
T  11044302 ctaatgcatgaggtgtacaaaggtgtatgaaaataaagagtgtctatgtatcattactct 11044361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 2318217 - 2318163
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||    
T  2318217 ctaatgcatggagtgtacaaaggtgtatggaaataaagtgtgtctatgtaacatt 2318163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 16374800 - 16374746
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||| |||||||| |||||||| |||||||||||||||||||| ||||    
T  16374800 ctaatgtatggagtgtacaaaggtgtatgagaataaagggtgtctatgtaacatt 16374746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 21234401 - 21234495
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||| | ||||||| ||||||| |  ||||||| ||||||||||| |||||||||  ||| || ||||||||||||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcaca 21234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 21234525 - 21234579
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||||||||| ||||    
T  21234525 ctaatgtatggggtgtacaatggtgtatgagaataaaaggtgtctatgtaacatt 21234579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 31736001 - 31736047
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctat 296  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||    
T  31736001 ctaatgtatggggtgtacaagggtgtatgggaataaaaggtatctat 31736047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 41423810 - 41423860
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||| ||||    
T  41423810 tgcatggggtgtacaaaggtgtatgagaataaagggtgtttatgtaacatt 41423860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 11044186 - 11044268
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    ||||||||||||| ||| ||||| |||||||||||||||||  |||||||||          |||||||||| ||||||||||||||||||||    
T  11044186 aagagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaag 11044268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 32564526 - 32564461
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    |||| |||||| |||||||   ||||||||||||||| |  |||||||||||||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgaca 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 40846213 - 40846124
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaa 215  Q
    |||| |||||| ||||||| | ||||||||||||||| |  |||||| |||||||||||||| ||| ||| | |  ||||||||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaa 40846124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 16374894 - 16374830
Alignment:
Q  156 caatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||  |||||| |||||||||||||||||||||  ||||||||| | | ||||||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcaca 16374830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 35468957 - 35468861
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||| | |||| ||||||||||||  |||||||||||| |||||||| | | || | || |||||||| |||||| ||||    
T  35468957 aagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacaca 35468861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 2318320 - 2318261
Alignment:
Q  149 taggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccc 208  Q
    |||||||||| ||| || ||||||||||||||||||||||||  ||  ||||||||||||    
T  2318320 taggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggaccc 2318261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 35137657 - 35137716
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    |||||||||||| |||||||||||||||| ||| ||| ||| |||||| |||||| ||||    
T  35137657 ctaatgcatgggatgtacaagggtgtatgagaacaaatggtatctatggatcattactct 35137716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 38044321 - 38044375
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  38044321 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 38044375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 46033879 - 46033809
Alignment:
Q  148 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagca 218  Q
    ||||||||||||||| |  || ||||||||| |||||||||||||||  |||| || || |||||||||||    
T  46033879 ttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagca 46033809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 12311041 - 12311082
Alignment:
Q  263 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||    
T  12311041 tgtacaaaggtgtatggaaataaagggtgtctatgtaacatt 12311082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 35522881 - 35522970
Alignment:
Q  131 atgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| ||| ||| | ||| ||||||||||| |  || |||||||||||||||||||||||||   ||  |||| ||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcaca 35522970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 39255887 - 39255846
Alignment:
Q  263 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||  ||||||||||||||||||| ||||    
T  39255887 tgtacaagggtgtatgataataaagggtgtctatgtaacatt 39255846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 39256023 - 39255955
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgt 194  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  |||| ||||| |||||||||||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt 39255955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 6e-32; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 17598554 - 17598648
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 32869678 - 32869772
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32869772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 22880755 - 22880664
Alignment:
Q  129 taatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcaca 22880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 11427615 - 11427712
Alignment:
Q  125 agagtaatgatatataaacacctt--taggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||||| |  ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 11427712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 23128234 - 23128133
Alignment:
Q  119 tttagaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagca 218  Q
    |||| |||| |||||||||||| ||||||||| |||  ||||||||  ||||||||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  23128234 tttaaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagca 23128135  T
Q  219 ca 220  Q
    ||    
T  23128134 ca 23128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 29857827 - 29857921
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| |||||||||| |||||||||| || || |||||||||||||||||||||||||| | ||||||| |||||| |||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 29857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 320
Target Start/End: Original strand, 29857951 - 29858021
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttgtttattgt 320  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||||    
T  29857951 ctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcattactcttttttttttgt 29858021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 32869802 - 32869868
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttgttta 316  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  32869802 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactcttttttta 32869868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 6209567 - 6209471
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctatt-gacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||||||||||||||| ||||| ||||| |||||||||||||| |||||| ||||||||||||||||| ||||||    
T  6209567 aagagtaatgatacatagacacccttaggtggcaataca-ctatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcaca 6209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 11427742 - 11427801
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  11427742 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactct 11427801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 15832575 - 15832666
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaa 215  Q
    ||||||||||||| ||| ||||||||||||| ||||| |||  ||||||||||||||||||| ||||||||| ||||||||| || ||||||    
T  15832575 aagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 17598678 - 17598740
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttg 312  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||    
T  17598678 ctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactctttg 17598740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 15832701 - 15832755
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  15832701 ctaatgcatggggtgtacaagggtgtattggaataaagggtgtctacgtatcatt 15832755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 31109500 - 31109414
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgca 212  Q
    ||||||||||  ||| ||||| ||||||||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgca 31109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 15990144 - 15990052
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15990052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 22880634 - 22880574
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 310  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  22880634 ctaatacatggggtgtacaagggtgtatgggaataaatggtgtatatgtatcattactctt 22880574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 30341462 - 30341370
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  30341462 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 30341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 28536582 - 28536494
Alignment:
Q  130 aatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||| ||||||| | ||||||||||||||| |  |||||||||||||||||||||||||||   ||| ||||||||| ||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcaca 28536494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 15508124 - 15508034
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 31976247 - 31976342
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||| |||||| ||| ||| | ||||||||||||| | |  || |||||||||||||||||||||||||  |||| || ||||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcaca 31976342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 31976372 - 31976426
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  31976372 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 31976426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 31110861 - 31110767
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| ||| ||| | ||||||||||||||| |  ||||||| ||||  |||||||||||||||| ||| ||||||| |||||||||||    
T  31110861 aagagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcaca 31110767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 4231560 - 4231638
Alignment:
Q  138 ataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    ||||||| | ||||||||||||||| |  ||| ||||||||||||||||||||||||   ||  |||||||||||||||    
T  4231560 ataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaag 4231638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 31110737 - 31110683
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| ||||||||||||| ||||||||| |||||||| |||||||||| ||||    
T  31110737 ctaatgtatggggtgtacaaaggtgtatggaaataaaggatgtctatgtaacatt 31110683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 31953130 - 31953036
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||| | ||||||||||||||| |  |||||||||||| |||||||||||| ||  ||| ||||||| | ||||| ||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacaca 31953036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 23128103 - 23128043
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaat-aaagggtgtctatgtatcattcctct 309  Q
    |||||||||||| ||||||||||||||||| ||| ||||| | ||||||||||||| ||||    
T  23128103 ctaatgcatgggatgtacaagggtgtatggaaataaaaggttctctatgtatcattactct 23128043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 6209441 - 6209383
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    |||||||||||| ||||||| | |||| ||||||||||||| ||||||||||||| ||||    
T  6209441 ctaatgcatgggatgtacaaagatgta-gggaataaagggtatctatgtatcattactct 6209383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 4231672 - 4231726
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  4231672 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 4231726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 12732480 - 12732550
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgt 194  Q
    ||||||||||||| ||| |||   ||| ||||||||| |   |||||||||||||||||||||||||||||    
T  12732480 aagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgt 12732550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 22422043 - 22422001
Alignment:
Q  262 gtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||    
T  22422043 gtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 22422001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    |||||||||||| ||| ||| | ||||||||||||| |||| ||||||| || |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 31953002 - 31952952
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||| |||| |||||| ||||||| |||||||||||| ||||    
T  31953002 tgcatggggtgtagaaggatgtatgagaataaatggtgtctatgtaacatt 31952952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 9e-31; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 13811650 - 13811746
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||| |||| ||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13811650 aagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13811746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 18520986 - 18520890
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18520986 aagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 36733046 - 36732948
Alignment:
Q  122 agaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||||| ||| ||||| |||||| |||||||| |  |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  36733046 agaagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcaca 36732948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 2740273 - 2740368
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||| | ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 2740368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 35785199 - 35785293
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcaca 35785293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 40145407 - 40145501
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  || ||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 40145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 42414402 - 42414308
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| |||||  |||||||||||||| |  ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 42414308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 6679697 - 6679792
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||| |||||| ||| ||| ||||||||||||||||| || ||||||||||||||||||||||||||||  |||| |||||||||||||| ||||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 6679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 14831814 - 14831908
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||  ||||||||||||||| |  |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 14831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 33149738 - 33149644
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| |||||||| |||||| |  ||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 33149644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 35943992 - 35943898
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcaca 35943898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 2740398 - 2740467
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt-tgtttatt 318  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  2740398 ctaatgcatgggatgtacaagggtgtatgggaataaagggtgtctatgtatcattactcttctgtttatt 2740467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 33149614 - 33149545
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttgtttattg 319  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||    
T  33149614 ctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcattactctttttttattg 33149545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 14831938 - 14832001
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttgt 313  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||    
T  14831938 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactcgttgt 14832001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 15409712 - 15409616
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| ||| ||| | ||||||| ||||||||   |||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 31008986 - 31009082
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| ||||||| | ||||||| ||||||||   |  |||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  31008986 aagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 31009082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 28177775 - 28177869
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  ||||||||||||||||||||||||||||  |||| |||||||||||||| ||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 28177869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 35785323 - 35785377
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  35785323 ctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatt 35785377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 16327902 - 16327995
Alignment:
Q  127 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||| ||||| | | ||||||||||||||||| ||||||||||||| |||||||||||||||  ||| ||| ||| | ||||||||||    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcaca 16327995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 3921367 - 3921275
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||||| |||||| ||||||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  3921367 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 3921275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 18520860 - 18520800
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 310  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  18520860 ctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcattactctt 18520800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 41470517 - 41470425
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagc 217  Q
    |||||||| ||| ||| |||||||||||||||||||||||  || | |  || | |||||||||||||||| |||||||||||||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 36732918 - 36732872
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctat 296  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  36732918 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctat 36732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 39688999 - 39688934
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctga 189  Q
    |||||| |||||| ||||||||| ||| |||||||||||||  |||||||||||||||||||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctga 39688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 40145531 - 40145592
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 311  Q
    |||||||| | ||||||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  40145531 ctaatgcacgaggtgtacaagggtatatgagaataaagggtgtctatgtatcattactcttt 40145592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 216
Target Start/End: Complemental strand, 2252269 - 2252178
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    ||||| |||||| ||||||| | ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2252178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 13811776 - 13811826
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtat 300  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  13811776 ctaatgcatgggatgtacaaggatgtatgggaataaatggtgtctatgtat 13811826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 15409586 - 15409532
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  15409586 ctaatgtatggggtgtacaagggtgtatgcgaataaagggtgtttatgtaacatt 15409532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 31009116 - 31009166
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  31009116 tgcatggggtgtacaaaggtgtatgagaataaagggtgtctatgtaacatt 31009166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 31132458 - 31132512
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||| ||||||||||||||||||  |||||||||||| |||||||||||    
T  31132458 ctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtttatgtatcatt 31132512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 311
Target Start/End: Complemental strand, 16115296 - 16115247
Alignment:
Q  262 gtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 311  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  16115296 gtgtacaagagtgtatgagaataaagggtgtctatgtatcattactcttt 16115247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 31132392 - 31132436
Alignment:
Q  174 ccacacaaaaatctgacacgtaatcacgtggaccccgcacaagca 218  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagca 31132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 20073616 - 20073522
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||||| ||| | |||| || ||||||| |  ||||||| |||| ||||||||  ||||| | ||||||||||| |||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcaca 20073522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 35943864 - 35943814
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||| ||||    
T  35943864 tgcatggggtgtacaagggtgtatggaaataaaatgtgtctatgtaacatt 35943814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 36875702 - 36875644
Alignment:
Q  127 agtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaat 185  Q
    |||||||||| ||| ||||| ||||||||||||||| |  |||||||||||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 39557594 - 39557534
Alignment:
Q  149 taggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggacccc 209  Q
    ||||||| |||||| || || ||| ||||||||||||||||||||| ||||| ||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggacccc 39557534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 10356639 - 10356698
Alignment:
Q  131 atgatatataaacacctttaggtggcaatacatct-attgacacccacacaaaaatctga 189  Q
    |||||| ||| ||| | |||||||||||||||||  ||||||||||||||||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 21370048 - 21370098
Alignment:
Q  170 acacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||| ||||||||||||| ||  ||||||||||||||||||| ||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacaca 21370098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 26720516 - 26720610
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  || ||||| ||| |||||||||||||||   ||| |||| ||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcaca 26720610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 26990265 - 26990359
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  || ||||| ||| |||||||||||||||   ||| |||| ||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcaca 26990359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 9e-31; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 10249484 - 10249388
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 10249388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 32505749 - 32505654
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||||| ||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 13438343 - 13438437
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13438437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 9058478 - 9058574
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 9058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 33436202 - 33436106
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  33436202 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 28863458 - 28863549
Alignment:
Q  129 taatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 28863549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 40701478 - 40701572
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 40701572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 7465836 - 7465741
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||||| |||| |||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 7465741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 17473020 - 17473114
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| |||| |||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 17473114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 27864704 - 27864798
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||| ||||||||||| |  |||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcaca 27864798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 28381755 - 28381661
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||||||||||| || | ||||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcaca 28381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 30915459 - 30915557
Alignment:
Q  122 agaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||||| ||| ||||| ||||||||||||||| |  ||||| |||||| |||||||||||||||| |||||||||||||| |||||||||    
T  30915459 agaagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcaca 30915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 5574589 - 5574494
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||||  ||||||||||||||| |  |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 5574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 312
Target Start/End: Complemental strand, 7465711 - 7465649
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctttg 312  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7465711 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactctttg 7465649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 42257191 - 42257287
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| ||| ||| |||||||||||||||||||  |||||||||||| |||||||||||||||   ||| |||||||||||||||||||    
T  42257191 aagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 19930917 - 19930826
Alignment:
Q  129 taatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||| ||| ||||| ||||||||||||||| |  |||||| |||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacaca 19930826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 4060685 - 4060779
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||| ||||||| || |||||| |||||||||||||||||||||| | ||||||| |||||| |||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 5574476 - 5574422
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5574476 ctaatgcatggcgtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 5574422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 10249358 - 10249304
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10249358 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 10249304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 13438467 - 13438521
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13438467 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 13438521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 17473144 - 17473198
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17473144 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 17473198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 28863579 - 28863633
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28863579 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 28863633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 19930796 - 19930735
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 311  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  19930796 ctaatgcatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcattactcttt 19930735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 20700813 - 20700909
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||| | ||| ||||||||||| |  ||||| || |||||||||||||||||||| |||||||||||||||| |||||||    
T  20700813 aagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 20700943 - 20700993
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20700943 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatt 20700993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 38882787 - 38882733
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  38882787 ctaatgcatggggtgtacaagggtgtatgggaataaatggtctctatgtatcatt 38882733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 40614002 - 40613908
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||| | ||||||||||||||| |  ||||||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 40613908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 32505623 - 32505570
Alignment:
Q  251 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  32505623 taatgcatggggtgtacaagggtgtatgagaataaagagtgtctatgtatcatt 32505570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 38882915 - 38882831
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggacccc 209  Q
    ||||||||||||| ||| ||||| |||||||||||||   || |||||| |||||||||||||||||||||| |||||||||||||    
T  38882915 aagagtaatgatacatagacacccttaggtggcaataaccct-ttgacatccacacaaaaatctgacacgtagtcacgtggacccc 38882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 40613877 - 40613824
Alignment:
Q  251 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40613877 taatgtatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatt 40613824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 28381624 - 28381572
Alignment:
Q  257 atggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  28381624 atggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactct 28381572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 40701602 - 40701661
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  40701602 ctaatgcatcgggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactct 40701661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 38732354 - 38732444
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||| |||||| ||||||||| ||| ||| |||||||||  ||||||||||||||||||||||||| ||  |||  |||||||||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 38732444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 26891606 - 26891510
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| |||  |||| ||||||||||||||| |  | ||||||||||||||||||||||| ||  ||||||||||| || |||||||||    
T  26891606 aagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcaca 26891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 45097837 - 45097745
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||||| |||||| ||||||| | |||||||||||||||||  |||||||||| |||||||||||||| ||   ||  |||||||||||||||    
T  45097837 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaag 45097745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 2533123 - 2533217
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||| |||||| ||| ||| | ||| |||||||||||||  |||||||| ||||||||||||||||||||  ||| | |||||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcaca 2533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 4060809 - 4060868
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    |||||||||||||||||||||||||||||| |||||| | ||| ||||||||||| ||||    
T  4060809 ctaatgcatggggtgtacaagggtgtatggaaataaaagatgtttatgtatcattactct 4060868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 27864815 - 27864874
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||| |||||| |||||||||||||||| |||||||||||||| |||||||||| ||||    
T  27864815 ctaatacatgggatgtacaagggtgtatgagaataaagggtgtcaatgtatcattactct 27864874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 33436210 - 33436305
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||| | |||| |||||||||| || |||||||||||| ||||||||||||||| | || ||||||   |||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcaca 33436305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 3439995 - 3440073
Alignment:
Q  142 acacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||| |||||||||||||||    | ||||||||||||||||||| ||| || || ||||||||||||||||||||||    
T  3439995 acacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcaca 3440073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 9058604 - 9058658
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||    
T  9058604 ctaatgcatggggtgtacaagagtgtatgggaataaagggtatttatatatcatt 9058658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 17820104 - 17820010
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||| || |||||||||||||| |  ||||||||||||||||||||||||| ||  | ||||||||||| ||||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacaca 17820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 30915587 - 30915641
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||| |||||||||||||||||||||||| ||||| || |||||||||||||||    
T  30915587 ctaatacatggggtgtacaagggtgtatggaaataatggatgtctatgtatcatt 30915641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 33436076 - 33436022
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||    
T  33436076 ctaatgcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgcatcatt 33436022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 43490121 - 43490211
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||| |||||| ||||||||| ||||||| ||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 43490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 2533249 - 2533289
Alignment:
Q  252 aatgcatggggtgtacaagggtgtatgggaataaagggtgt 292  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  2533249 aatgtatggggtgtacaagggtgtatgggaataaagggtgt 2533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 17823782 - 17823854
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaa 196  Q
    ||||||||||||| ||| ||| | ||||||||||||||||   |  |||||||||||||||||||||||||||    
T  17823782 aagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgtaa 17823854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 38273220 - 38273148
Alignment:
Q  148 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||||||| |  || ||||||||||||||||||||||||||  ||| |||||||||||| ||||||    
T  38273220 ttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcaca 38273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 3737986 - 3738037
Alignment:
Q  169 gacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcaca 3738037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 36168960 - 36169014
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| |||||||||||||| ||||||| ||||||||||||| |||||| ||||    
T  36168960 ctaatgtatggggtgtacaagagtgtatgagaataaagggtgtttatgtaacatt 36169014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 42257317 - 42257366
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgta 299  Q
    |||||| |||||||||||||| |||||| | |||||||||||||||||||    
T  42257317 ctaatgtatggggtgtacaagagtgtatagaaataaagggtgtctatgta 42257366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 2997565 - 2997497
Alignment:
Q  148 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  2997565 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 3440113 - 3440157
Alignment:
Q  260 gggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||    
T  3440113 gggtgtacaaaggtgtatggaaataaagggtgtctatgtaacatt 3440157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 13365349 - 13365443
Alignment:
Q  124 aagagtaatgatatataaacac--ctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||||| |||||| ||||||||  | |||| |||||||| | |  ||||||||||||||||||||||||| || | ||  |||||||||||||||    
T  13365349 aagagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaag 13365443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 17823919 - 17823966
Alignment:
Q  257 atggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||||  |||||||| |||||||||| ||||    
T  17823919 atggggtgtacaagggtgtatgtaaataaaggatgtctatgtaacatt 17823966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 36168835 - 36168928
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagca 218  Q
    ||||| |||||| ||| ||| | |||| || |||||||||  || || ||||||||||||| ||||||||   ||| |||||||||||||||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagca 36168928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 41236347 - 41236441
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||||||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 41236441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 42044469 - 42044373
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| |||||||||||||||||  |  |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42044469 aagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 48183151 - 48183055
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||| ||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 50052530 - 50052434
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||| | ||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50052530 aagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 11511562 - 11511468
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 11511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 480549 - 480453
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||||||| ||||||| |  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  480549 aagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 3481654 - 3481748
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||| ||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactct-ttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcaca 3481748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 6034044 - 6034138
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 6034138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 54473633 - 54473539
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||||| ||||||| ||||||| |  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 54473539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 24995210 - 24995113
Alignment:
Q  123 gaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||||||||  ||||| |||| |||||||||| |  |||||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  24995210 gaagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 29239884 - 29239980
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| ||||| ||||||||||||||| |  |||||| |||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  29239884 aagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 29239980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 41236471 - 41236530
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41236471 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 41236530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 50526271 - 50526178
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcac 219  Q
    ||||||||||| ||| ||| ||||||||||||||||| |  ||||||||||||||||||||||||||||  |||||||||  ||||||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 23608233 - 23608329
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||||||| ||||| |||| || ||||||| |  ||||||||||||||||||||||||||||| ||||||| || || ||||||||||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcaca 23608329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 29234346 - 29234251
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||| ||| ||||| |||| |||||||||| |  |||| |||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 29234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 24995082 - 24995024
Alignment:
Q  251 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  24995082 taatgcatggggtgtacaatggtgtatgggaataaagggtgtctatgtatcattactct 24995024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 42044343 - 42044282
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 311  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  42044343 ctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcattactcttt 42044282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 48183024 - 48182971
Alignment:
Q  251 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  48183024 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 48182971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 6034168 - 6034222
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  6034168 ctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcatt 6034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 29548061 - 29547994
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    |||||| |||||| ||||||| | |||||||||||||||||  |||||||||||||||||||||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgaca 29547994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 47986207 - 47986298
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    ||||| |||||| ||||||||| |||||||||||||||||  |||||| |||||||||||||||||| ||   ||  |||||||||||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaag 47986298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 29240014 - 29240064
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  29240014 tgcatggggtgtacaagagtgtatgggaataaagggtgtctatgtaacatt 29240064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 41823926 - 41823976
Alignment:
Q  170 acacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcaca 41823976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 55079814 - 55079749
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    |||| |||||| ||||||||| ||||||||||||||| || |||||||||| ||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgaca 55079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 19670818 - 19670726
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    |||||| |||||| ||||||||| ||||||||||||||| |  ||||||| ||||||||||||||||| ||   ||  |||||||||||||||    
T  19670818 aagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaag 19670726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 23608359 - 23608419
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 310  Q
    |||||||||| |||||||| || |||||||||||||||| ||||||||||||||| |||||    
T  23608359 ctaatgcatgaggtgtacagggatgtatgggaataaaggatgtctatgtatcattactctt 23608419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 29977883 - 29977979
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||||| ||| | | |  |||||||||||||| |  || |||||||||||||||||||||||||| |||  |||||||| ||||||||||    
T  29977883 aagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcaca 29977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 31910192 - 31910286
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaataca-tctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||| |||||| ||| ||| | ||||||| ||||||| ||| |||||||||||||||||||||||||| ||  ||| |||||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactct-ttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcaca 31910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 55475189 - 55475256
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    |||||| |||||| ||||||| | ||||||||||||||| |  |||||||||||||||||||||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 54473509 - 54473455
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  54473509 ctaatacatggagtgtacaagggtgtatgggaataaagggtgttcatgtatcatt 54473455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 32766955 - 32767023
Alignment:
Q  123 gaagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    ||||||| |||||| ||||||||  ||||||||||||||| |  |||||||||| ||||||||||||||    
T  32766955 gaagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgaca 32767023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 48647828 - 48647732
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||| | ||||||| | ||||||  ||||||| || || ||||||||| |||||||| ||||||  |||||||||| |||||||||||||    
T  48647828 aagagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcaca 48647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 304
Target Start/End: Complemental strand, 50052393 - 50052350
Alignment:
Q  261 ggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||    
T  50052393 ggtgtacaaaggtgtatgggaataaagggtgtctatgtaacatt 50052350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 216
Target Start/End: Complemental strand, 50813993 - 50813902
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    ||||| |||||| ||||||||  |||||||| |||||| |  ||||||||||||||||||||||||| ||  |||  || ||||||||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaag 50813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 304
Target Start/End: Complemental strand, 53352539 - 53352496
Alignment:
Q  261 ggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  53352539 ggtgtacaagggtgtatgaaaataaagggtgtctatgtatcatt 53352496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 53352660 - 53352574
Alignment:
Q  131 atgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagca 218  Q
    |||||| ||| ||||| ||||||| ||||||||   || ||||| |||||||||||||||||||| | | ||||||||||||||||||    
T  53352660 atgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagca 53352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 11511437 - 11511380
Alignment:
Q  251 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctct 309  Q
    ||||||||| ||||||||||||||||||| ||||||  |||||||||||||||| ||||    
T  11511437 taatgcatgaggtgtacaagggtgtatggaaataaa-tgtgtctatgtatcattactct 11511380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 31910316 - 31910370
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||| ||||| |||||||| ||||||||||||||| |||||||||||| ||||    
T  31910316 ctaatgtatgggatgtacaagagtgtatgggaataaatggtgtctatgtaacatt 31910370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 41824006 - 41824060
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||| ||||||||| |||||||| ||||||| |||||||||||| ||||    
T  41824006 ctaatgcatgaggtgtacaaaggtgtatgagaataaatggtgtctatgtaacatt 41824060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 44536846 - 44536781
Alignment:
Q  125 agagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    ||||| |||||| |||||||| |||||||||||||||| |  |||||| ||||||||||||||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaataca-cccttgacatccacacaaaaatctgaca 44536781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 50526143 - 50526093
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||||| | |||||||||||| |||||| ||||    
T  50526143 tgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 50526093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    |||| |||||| ||||||| | |||||||||||||||||  |||||||| ||| ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 17983821 - 17983753
Alignment:
Q  148 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaag 216  Q
    ||||||||||||||| |  ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  17983821 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 17983753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 40574779 - 40574846
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacg 193  Q
    |||| |||||| ||| ||| | |||||||| |||||| |  |||||||||||||||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 40574910 - 40574949
Alignment:
Q  257 atggggtgtacaagggtgtatgggaataaagggtgtctat 296  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  40574910 atggggtgtacaagggtgtatgagaataaaaggtgtctat 40574949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 19670692 - 19670638
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  19670692 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 19670638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 29547935 - 29547881
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  29547935 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 29547881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 55475315 - 55475369
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||    
T  55475315 ctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 55475369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 480423 - 480382
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtg 291  Q
    |||||||||||||||||||| ||||||||| ||||| |||||    
T  480423 ctaatgcatggggtgtacaaaggtgtatggaaataatgggtg 480382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 28480346 - 28480274
Alignment:
Q  148 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||| |||||||  | || |||| ||||||||||||||||| ||| ||| ||||||||| ||||| ||||    
T  28480346 ttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28480274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 28481221 - 28481149
Alignment:
Q  148 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||| |||||||  | || |||| ||||||||||||||||| ||| ||| ||||||||| ||||| ||||    
T  28481221 ttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28481149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 28482096 - 28482024
Alignment:
Q  148 ttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||| |||||||  | || |||| ||||||||||||||||| ||| ||| ||||||||| ||||| ||||    
T  28482096 ttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28482024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 10211 - 10115
Alignment:
Q  124 aagagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    |||||| |||||| ||| |||||||||||||||||||||||  |||||| ||||| |||||||||||||||| ||||||||||| || |||||||||    
T  10211 aagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcaca 10115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 10085 - 10025
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctctt 310  Q
    ||||||||| |||||||||||||||||||| ||||| |||||||||||||||||| |||||    
T  10085 ctaatgcatagggtgtacaagggtgtatggaaataatgggtgtctatgtatcattactctt 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 4029 - 4123
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| |||||||||| |||||||||| || || |||||||||||||||||||||||||| | ||||||| |||||| |||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 4153 - 4214
Alignment:
Q  250 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattcctcttt 311  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  4153 ctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcattactcttt 4214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 1029 - 935
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||| ||||||||||||||||| |  || ||| ||||||||||| |||||||||| ||||||| | ||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 901 - 851
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  901 tgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatt 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 1029 - 935
Alignment:
Q  126 gagtaatgatatataaacacctttaggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||||||||| ||| ||| ||||||||||||||||| |  || ||| ||||||||||| |||||||||| ||||||| | ||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 901 - 851
Alignment:
Q  254 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  901 tgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatt 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 17077 - 17148
Alignment:
Q  149 taggtggcaatacatctattgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 220  Q
    ||||| ||||||||||  | |||| |||||||||||||||||| ||  |||| |||||||||||||||||||    
T  17077 taggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 17148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 304
Target Start/End: Original strand, 17238 - 17281
Alignment:
Q  261 ggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||    
T  17238 ggtgtacaaaggtgtatggaaataaagggtgtctatgtaacatt 17281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 6560 - 6483
Alignment:
Q  50 ttgctgtgaggatagtgagacaagagtatgcatgtggt--ccttctacatgtatatactttggcctcattatttagaa 125  Q
    ||||| || |||||||||| |||| |||||||| ||||  |||||| ||| | |||||||||||||||||||||||||    
T  6560 ttgctttggggatagtgaggcaagggtatgcatttggtttccttctccatttgtatactttggcctcattatttagaa 6483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 152511 - 152563
Alignment:
Q  139 taaacacctttaggtggcaatacatctattgacacccacacaaaaatctgaca 191  Q
    |||||||| || |||||||||||| |  |||||||||||||||||||||||||    
T  152511 taaacacccttgggtggcaatacaccccttgacacccacacaaaaatctgaca 152563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 8832 - 8785
Alignment:
Q  257 atggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 304  Q
    |||||||||||||||||||||  ||||||| |||||||||||| ||||    
T  8832 atggggtgtacaagggtgtataagaataaaaggtgtctatgtaacatt 8785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University