View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18273_low_31 (Length: 237)

Name: NF18273_low_31
Description: NF18273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18273_low_31
NF18273_low_31
[»] chr1 (38 HSPs)
chr1 (1-108)||(37029528-37029635)
chr1 (109-212)||(2581912-2582015)
chr1 (107-214)||(38595149-38595256)
chr1 (107-214)||(8346386-8346493)
chr1 (112-214)||(9474874-9474976)
chr1 (111-212)||(51898683-51898784)
chr1 (112-214)||(3000319-3000421)
chr1 (111-214)||(41758804-41758907)
chr1 (115-214)||(44548374-44548473)
chr1 (112-214)||(27564733-27564835)
chr1 (112-214)||(47452318-47452420)
chr1 (112-206)||(48716288-48716382)
chr1 (110-206)||(38632327-38632423)
chr1 (111-214)||(50630457-50630560)
chr1 (109-214)||(32813244-32813349)
chr1 (112-211)||(37649198-37649297)
chr1 (112-214)||(43132-43234)
chr1 (142-214)||(13414791-13414863)
chr1 (113-205)||(11152385-11152476)
chr1 (109-206)||(23597097-23597194)
chr1 (107-214)||(5958998-5959105)
chr1 (112-214)||(50590998-50591100)
chr1 (110-202)||(26274430-26274522)
chr1 (134-214)||(45044558-45044638)
chr1 (119-214)||(26440741-26440836)
chr1 (111-214)||(37926436-37926539)
chr1 (112-212)||(6260870-6260970)
chr1 (110-214)||(49811525-49811629)
chr1 (117-206)||(44453984-44454073)
chr1 (139-212)||(48489328-48489400)
chr1 (112-214)||(41608491-41608593)
chr1 (112-202)||(47748443-47748532)
chr1 (112-212)||(3302533-3302633)
chr1 (143-206)||(44334176-44334239)
chr1 (139-201)||(750240-750301)
chr1 (139-201)||(5489880-5489941)
chr1 (139-201)||(43571021-43571082)
chr1 (139-201)||(48498897-48498958)
[»] chr4 (36 HSPs)
chr4 (112-214)||(11511460-11511562)
chr4 (110-214)||(24995105-24995209)
chr4 (107-214)||(50052426-50052533)
chr4 (110-214)||(48183047-48183151)
chr4 (107-214)||(480445-480552)
chr4 (111-214)||(29234243-29234346)
chr4 (107-214)||(42044365-42044472)
chr4 (112-214)||(3481654-3481756)
chr4 (112-214)||(6034044-6034146)
chr4 (112-214)||(41236347-41236449)
chr4 (109-214)||(29239883-29239988)
chr4 (112-206)||(54473539-54473633)
chr4 (112-205)||(50526178-50526271)
chr4 (110-214)||(23608233-23608337)
chr4 (112-214)||(31910192-31910294)
chr4 (110-214)||(29977883-29977987)
chr4 (108-214)||(19670714-19670820)
chr4 (150-214)||(41823920-41823984)
chr4 (112-214)||(40574779-40574881)
chr4 (117-214)||(53352564-53352660)
chr4 (142-214)||(48647724-48647796)
chr4 (110-214)||(55475189-55475293)
chr4 (111-214)||(47986207-47986310)
chr4 (111-214)||(50813890-50813993)
chr4 (134-214)||(17983741-17983821)
chr4 (110-214)||(32766956-32767060)
chr4 (112-198)||(8343177-8343263)
chr4 (110-177)||(29547994-29548061)
chr4 (111-214)||(44536744-44536846)
chr4 (111-213)||(28480267-28480369)
chr4 (111-213)||(28481142-28481244)
chr4 (111-213)||(28482017-28482119)
chr4 (110-180)||(47104542-47104612)
chr4 (112-177)||(55079749-55079814)
chr4 (144-214)||(18769141-18769211)
chr4 (120-214)||(29589738-29589831)
[»] chr7 (39 HSPs)
chr7 (110-214)||(8080381-8080485)
chr7 (110-214)||(7389387-7389491)
chr7 (111-214)||(36361911-36362014)
chr7 (112-214)||(4999512-4999614)
chr7 (112-214)||(38267040-38267142)
chr7 (108-214)||(38837213-38837319)
chr7 (111-214)||(3434561-3434664)
chr7 (107-214)||(35137528-35137635)
chr7 (111-214)||(36362025-36362128)
chr7 (112-214)||(19329842-19329944)
chr7 (115-214)||(3783998-3784097)
chr7 (109-214)||(40957704-40957809)
chr7 (110-214)||(19436185-19436289)
chr7 (113-214)||(32951491-32951592)
chr7 (112-214)||(21234401-21234503)
chr7 (107-214)||(8238207-8238315)
chr7 (110-214)||(36208171-36208275)
chr7 (115-214)||(3694370-3694469)
chr7 (111-214)||(46033799-46033902)
chr7 (112-207)||(46374807-46374902)
chr7 (110-214)||(38044195-38044299)
chr7 (107-214)||(35468853-35468960)
chr7 (109-214)||(11044185-11044280)
chr7 (111-214)||(22343360-22343463)
chr7 (111-214)||(26296643-26296746)
chr7 (111-214)||(41915740-41915843)
chr7 (106-212)||(7727900-7728006)
chr7 (108-214)||(18207176-18207281)
chr7 (117-214)||(35522881-35522978)
chr7 (112-214)||(41423682-41423784)
chr7 (109-178)||(10343597-10343666)
chr7 (112-214)||(39255922-39256023)
chr7 (112-214)||(40846111-40846213)
chr7 (146-214)||(27744307-27744375)
chr7 (112-214)||(32564424-32564526)
chr7 (142-206)||(16374830-16374894)
chr7 (139-201)||(26898337-26898398)
chr7 (139-180)||(44326303-44326343)
chr7 (112-164)||(31735884-31735936)
[»] chr5 (31 HSPs)
chr5 (107-214)||(18520882-18520989)
chr5 (106-212)||(14831808-14831914)
chr5 (110-214)||(36732940-36733044)
chr5 (111-214)||(2740273-2740376)
chr5 (108-214)||(13811648-13811754)
chr5 (112-214)||(40145407-40145509)
chr5 (112-214)||(33149636-33149738)
chr5 (112-206)||(42414308-42414402)
chr5 (111-214)||(6679697-6679800)
chr5 (112-214)||(35785199-35785301)
chr5 (112-214)||(28177775-28177877)
chr5 (112-214)||(35943890-35943992)
chr5 (111-203)||(41470425-41470517)
chr5 (110-206)||(15409616-15409712)
chr5 (112-214)||(26720516-26720618)
chr5 (112-214)||(26990265-26990367)
chr5 (109-214)||(3921263-3921368)
chr5 (112-212)||(20073516-20073616)
chr5 (108-212)||(31008984-31009088)
chr5 (107-214)||(36875610-36875708)
chr5 (111-214)||(2252166-2252269)
chr5 (112-214)||(33825322-33825424)
chr5 (156-214)||(21370048-21370106)
chr5 (113-206)||(16327902-16327995)
chr5 (160-204)||(31132392-31132436)
chr5 (110-214)||(39688895-39688999)
chr5 (112-214)||(6259999-6260101)
chr5 (117-175)||(10356639-10356698)
chr5 (161-214)||(25831334-25831387)
chr5 (110-214)||(9603811-9603915)
chr5 (109-213)||(38296200-38296304)
[»] chr2 (34 HSPs)
chr2 (111-214)||(7465733-7465836)
chr2 (112-214)||(17473020-17473122)
chr2 (108-214)||(33436098-33436204)
chr2 (110-214)||(9058478-9058582)
chr2 (110-214)||(30915461-30915565)
chr2 (111-214)||(5574486-5574589)
chr2 (115-214)||(28863458-28863557)
chr2 (110-214)||(10249380-10249484)
chr2 (112-214)||(13438343-13438445)
chr2 (111-212)||(32505648-32505749)
chr2 (112-214)||(40701478-40701580)
chr2 (115-214)||(19930818-19930917)
chr2 (108-214)||(20700811-20700917)
chr2 (112-214)||(27864704-27864806)
chr2 (112-214)||(28381653-28381755)
chr2 (108-214)||(42257189-42257295)
chr2 (108-214)||(38273140-38273246)
chr2 (112-214)||(40613900-40614002)
chr2 (109-195)||(38882831-38882916)
chr2 (109-214)||(26891502-26891607)
chr2 (112-212)||(4060685-4060785)
chr2 (111-214)||(33436210-33436313)
chr2 (112-214)||(17820002-17820104)
chr2 (118-214)||(3439985-3440081)
chr2 (111-206)||(2533123-2533217)
chr2 (111-214)||(36168835-36168938)
chr2 (113-214)||(41575138-41575240)
chr2 (107-214)||(45097733-45097840)
chr2 (107-214)||(13365346-13365455)
chr2 (112-214)||(38732354-38732456)
chr2 (112-202)||(43490121-43490211)
chr2 (155-212)||(3737986-3738043)
chr2 (134-214)||(2997485-2997565)
chr2 (110-181)||(17823782-17823853)
[»] chr3 (38 HSPs)
chr3 (112-214)||(53982011-53982113)
chr3 (110-214)||(27714889-27714993)
chr3 (112-214)||(33644200-33644302)
chr3 (108-214)||(49607410-49607516)
chr3 (111-214)||(17470404-17470507)
chr3 (117-214)||(52629305-52629402)
chr3 (110-214)||(54868893-54868997)
chr3 (107-214)||(31456684-31456791)
chr3 (112-214)||(8076393-8076495)
chr3 (116-214)||(48587089-48587187)
chr3 (110-214)||(11095353-11095455)
chr3 (111-214)||(9562998-9563101)
chr3 (112-214)||(26141530-26141632)
chr3 (117-214)||(26754700-26754797)
chr3 (110-214)||(33118849-33118953)
chr3 (111-214)||(24699952-24700055)
chr3 (112-214)||(14623837-14623939)
chr3 (109-197)||(36707439-36707527)
chr3 (110-214)||(41189762-41189866)
chr3 (116-214)||(30801731-30801829)
chr3 (112-214)||(51419358-51419460)
chr3 (113-214)||(13898053-13898154)
chr3 (111-206)||(35536625-35536720)
chr3 (108-214)||(11347920-11348026)
chr3 (110-214)||(11907369-11907473)
chr3 (111-206)||(8956761-8956856)
chr3 (112-214)||(20764913-20765015)
chr3 (112-214)||(47531865-47531967)
chr3 (112-214)||(41080709-41080809)
chr3 (112-202)||(45058563-45058652)
chr3 (111-214)||(48375704-48375807)
chr3 (110-180)||(35965806-35965876)
chr3 (134-214)||(36331327-36331407)
chr3 (111-174)||(36331416-36331479)
chr3 (117-198)||(42823116-42823197)
chr3 (110-214)||(35093583-35093687)
chr3 (110-214)||(1758454-1758560)
chr3 (139-191)||(43745773-43745825)
[»] chr8 (34 HSPs)
chr8 (112-214)||(12831047-12831149)
chr8 (112-214)||(15197333-15197435)
chr8 (111-212)||(37038478-37038579)
chr8 (110-214)||(14547920-14548024)
chr8 (107-206)||(504127-504226)
chr8 (112-214)||(23122595-23122697)
chr8 (112-214)||(34012294-34012396)
chr8 (112-214)||(40423941-40424043)
chr8 (107-214)||(5957825-5957932)
chr8 (112-214)||(1179938-1180040)
chr8 (109-214)||(10284629-10284734)
chr8 (111-214)||(44507085-44507188)
chr8 (107-214)||(43414579-43414686)
chr8 (112-214)||(15048180-15048281)
chr8 (134-214)||(8841430-8841510)
chr8 (110-214)||(15258927-15259031)
chr8 (117-214)||(10621085-10621182)
chr8 (110-214)||(4854861-4854965)
chr8 (107-214)||(16383372-16383479)
chr8 (112-180)||(20074966-20075034)
chr8 (110-214)||(34307214-34307318)
chr8 (107-214)||(30479472-30479579)
chr8 (110-214)||(24307791-24307895)
chr8 (156-214)||(9122229-9122287)
chr8 (107-175)||(24307624-24307692)
chr8 (110-214)||(42221513-42221617)
chr8 (112-195)||(14055609-14055692)
chr8 (107-214)||(16056399-16056506)
chr8 (111-214)||(17443824-17443927)
chr8 (154-214)||(38229470-38229530)
chr8 (111-214)||(32032724-32032826)
chr8 (113-151)||(9122196-9122234)
chr8 (139-201)||(29705466-29705527)
chr8 (139-180)||(20148885-20148925)
[»] chr6 (23 HSPs)
chr6 (112-214)||(32869678-32869780)
chr6 (115-214)||(22880656-22880755)
chr6 (107-214)||(17598549-17598656)
chr6 (112-214)||(29857827-29857929)
chr6 (111-214)||(11427615-11427720)
chr6 (109-214)||(6209463-6209568)
chr6 (108-214)||(15832573-15832679)
chr6 (108-214)||(23128125-23128231)
chr6 (112-214)||(31109398-31109500)
chr6 (111-214)||(31976247-31976350)
chr6 (108-214)||(31110759-31110863)
chr6 (109-214)||(30341358-30341463)
chr6 (110-214)||(15990040-15990144)
chr6 (112-214)||(15508022-15508124)
chr6 (112-214)||(31953028-31953130)
chr6 (116-214)||(28536486-28536582)
chr6 (112-214)||(4231548-4231650)
chr6 (107-214)||(946371-946478)
chr6 (107-214)||(12732477-12732584)
chr6 (156-214)||(30870058-30870116)
chr6 (117-214)||(9379710-9379807)
chr6 (139-180)||(3213525-3213565)
chr6 (139-180)||(21293612-21293652)
[»] scaffold0321 (1 HSPs)
scaffold0321 (107-214)||(10107-10214)
[»] scaffold0237 (1 HSPs)
scaffold0237 (112-214)||(4029-4131)
[»] scaffold1268 (1 HSPs)
scaffold1268 (112-214)||(927-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (112-214)||(927-1029)
[»] scaffold0316 (1 HSPs)
scaffold0316 (141-214)||(17083-17156)
[»] scaffold0110 (1 HSPs)
scaffold0110 (112-214)||(8861-8963)
[»] scaffold0018 (1 HSPs)
scaffold0018 (139-214)||(152525-152600)


Alignment Details
Target: chr1 (Bit Score: 104; Significance: 6e-52; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 37029635 - 37029528
Alignment:
Q  1 gaaaacgagagaagattttggaaagcagagctaatggcaatagagcaacctacaatgaaaggccaggaatttggtgtaatgcatcaagtaacgtgttagg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37029635 gaaaacgagagaagattttggaaagcagagctactggcaatagagcaacctacaatgaaaggccaggaatttggtgtaatgcatcaagtaacgtgttagg 37029536  T
Q  101 gaatccaa 108  Q
    ||||||||    
T  37029535 gaatccaa 37029528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 2581912 - 2582015
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatt 208  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T
Q  209 ttct 212  Q
    ||||    
T  2582012 ttct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 38595149 - 38595256
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  38595149 aaaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T
Q  207 ttttctct 214  Q
     |||||||    
T  38595249 ctttctct 38595256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 8346493 - 8346386
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  8346493 aaaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T
Q  207 ttttctct 214  Q
     |||||||    
T  8346393 ctttctct 8346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 9474976 - 9474874
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  212 tct 214  Q
    |||    
T  9474876 tct 9474874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 51898784 - 51898683
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  211 ct 212  Q
    ||    
T  51898684 ct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 3000319 - 3000421
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  212 tct 214  Q
    |||    
T  3000419 tct 3000421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 41758804 - 41758907
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| |||| |||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacacttt 41758903  T
Q  211 ctct 214  Q
    ||||    
T  41758904 ctct 41758907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 115 - 214
Target Start/End: Complemental strand, 44548473 - 44548374
Alignment:
Q  115 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||||||||||| |||||| |||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 27564835 - 27564733
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||| | |||| |||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  212 tct 214  Q
    |||    
T  27564735 tct 27564733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 47452420 - 47452318
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  212 tct 214  Q
    |||    
T  47452320 tct 47452318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 48716382 - 48716288
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 38632423 - 38632327
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 50630457 - 50630560
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||| ||| |||| |||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50630556  T
Q  211 ctct 214  Q
    ||||    
T  50630557 ctct 50630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 32813244 - 32813349
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatt 208  Q
    ||||||| |||||||||||||| | |||| |||||||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||||||| |    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T
Q  209 ttctct 214  Q
    ||||||    
T  32813344 ttctct 32813349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 37649198 - 37649297
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||||||||||||| |||||||| |  ||||||||||||| ||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 43132 - 43234
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||||||||||||||||||   ||||  | ||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  212 tct 214  Q
    |||    
T  43232 tct 43234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 13414791 - 13414863
Alignment:
Q  142 caatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctct 13414863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 11152476 - 11152385
Alignment:
Q  113 agtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcac 205  Q
    |||||||| ||||||||||||| || ||||||||||||||| |||| ||||| |||||||||||||||||||| || ||||||||||||||||    
T  11152476 agtaatgaaacatagacacctt-aggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 206
Target Start/End: Complemental strand, 23597194 - 23597097
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||||||||||||||||||||| | |||| ||||||||||| |||||| ||||||||||||||||||||||| | ||||| ||||  |||||| ||||    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacaca 23597097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 5959105 - 5958998
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||||  |||||||||||| |||||||||||| || ||||  ||||||||||||||| |||    
T  5959105 aaaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtaca 5959006  T
Q  207 ttttctct 214  Q
     |||||||    
T  5959005 ctttctct 5958998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 50591100 - 50590998
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||| ||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  212 tct 214  Q
    |||    
T  50591000 tct 50590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 26274430 - 26274522
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaag 202  Q
    |||| |||||||||||||||||| |||  |||||||||| | ||||||| ||||| ||||||||||||| |||||||||||| || |||||||    
T  26274430 aagaataatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaag 26274522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 45044638 - 45044558
Alignment:
Q  134 ttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||| |||||||||||| ||||||||||| | |||||||||||| |||| ||| |||||||||||||| ||||||||||||    
T  45044638 ttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctct 45044558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 26440741 - 26440836
Alignment:
Q  119 gatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||| ||||||| | ||||||| ||||||||||||| ||||||||| ||||||||||||||| | ||| |||| |||||| ||||||| |||||||    
T  26440741 gatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctct 26440836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 37926539 - 37926436
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||||| | |||||| |||||||||| | ||| ||||||||||||||||||||||||| | ||| |||| |||| ||||| ||| |||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  211 ctct 214  Q
    ||||    
T  37926439 ctct 37926436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 6260870 - 6260970
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||| ||||| | | |||| ||| ||||||||| |  |||||||||||||||||| ||| || ||||||||||||||||| ||||||||||||    
T  6260870 gagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttc 6260969  T
Q  212 t 212  Q
    |    
T  6260970 t 6260970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 49811629 - 49811525
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||| ||||||| | |||| || ||||||||| ||||||| ||||| ||||||||||||||||| ||  | ||| ||||||||||||| ||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactt 49811530  T
Q  210 tctct 214  Q
    |||||    
T  49811529 tctct 49811525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 44453984 - 44454073
Alignment:
Q  117 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||||||||||||||||  |||||||||| |  |||| ||||||| |||||||||||| || || ||||||| ||| ||||||||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcaca 44454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 48489328 - 48489400
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttct 212  Q
    ||||||||||||||  |||| ||||| |||||||||||| || |||||||||| ||||||||||||||||||||    
T  48489328 tggcaatacaccctg-gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 41608593 - 41608491
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||| ||| | |||| ||||||||||||| ||||||| |||| |||||||||||| || | ||  ||||||||| ||||| ||| ||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  212 tct 214  Q
    |||    
T  41608493 tct 41608491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 47748443 - 47748532
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaag 202  Q
    |||| |||||||||| | ||| |||| ||||||||||||| |||||||||| |||||||||||||| || | ||  |||| ||||||||||    
T  47748443 gagttatgatacataaatacccttaggtggcaatacaccc-ttgacacccatataaaaatctgacatgtggccatatggatcccgcacaag 47748532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 3302633 - 3302533
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||| ||| | |||| || ||||| |  | | |||||||||| |||||||||||||||| |||  ||||||||  ||||||||| ||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 3302534  T
Q  212 t 212  Q
    |    
T  3302533 t 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 44334239 - 44334176
Alignment:
Q  143 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||| | |||||| ||||| ||||| ||||||||||||||| ||||||| |||||| ||||    
T  44334239 aatacacacattgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacaca 44334176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 750240 - 750301
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaa 201  Q
    |||||||||||||||| ||||||||| |||| |||||||||| || || |||||||| |||||    
T  750240 tggcaatacacccttt-acacccacacaaaattctgacacgtggtaacatggaccccacacaa 750301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 5489941 - 5489880
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaa 201  Q
    |||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  5489941 tggcaatacacccttt-acacccacataaaattctgacacgtggcaacttggaccccacacaa 5489880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 43571021 - 43571082
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaa 201  Q
    |||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  43571021 tggcaatacacccttt-acacccacataaaattctgacacgtggcaacttggaccccacacaa 43571082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 48498897 - 48498958
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaa 201  Q
    |||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  48498897 tggcaatacacccttt-acacccacataaaattctgacacgtggcaacttggaccccacacaa 48498958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 11511562 - 11511460
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  212 tct 214  Q
    |||    
T  11511462 tct 11511460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 24995209 - 24995105
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24995209 aagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattt 24995110  T
Q  210 tctct 214  Q
    |||||    
T  24995109 tctct 24995105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 50052533 - 50052426
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50052533 aaaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T
Q  207 ttttctct 214  Q
     |||||||    
T  50052433 ctttctct 50052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 48183151 - 48183047
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  210 tctct 214  Q
    |||||    
T  48183051 tctct 48183047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 480552 - 480445
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  480552 aaaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T
Q  207 ttttctct 214  Q
     |||||||    
T  480452 ctttctct 480445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 29234346 - 29234243
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||  || ||||||||||||||||||||||||||||||||||||||||| |||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 29234247  T
Q  211 ctct 214  Q
    ||||    
T  29234246 ctct 29234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 42044472 - 42044365
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42044472 aaaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T
Q  207 ttttctct 214  Q
     |||||||    
T  42044372 ctttctct 42044365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 3481654 - 3481756
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  212 tct 214  Q
    |||    
T  3481754 tct 3481756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 6034044 - 6034146
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| ||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  212 tct 214  Q
    |||    
T  6034144 tct 6034146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 41236347 - 41236449
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  212 tct 214  Q
    |||    
T  41236447 tct 41236449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 29239883 - 29239988
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatt 208  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||| |||||||||| |    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T
Q  209 ttctct 214  Q
    ||||||    
T  29239983 ttctct 29239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 54473633 - 54473539
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||||||||||||||||| |||| || ||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 54473539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 50526271 - 50526178
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcac 205  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 23608233 - 23608337
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| || || |||||||||| ||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactt 23608332  T
Q  210 tctct 214  Q
    |||||    
T  23608333 tctct 23608337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 31910192 - 31910294
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | |||| || |||||||| |||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||| ||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  212 tct 214  Q
    |||    
T  31910292 tct 31910294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 29977883 - 29977987
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||| | | |  ||| ||||||||||||| || ||||||||| ||||||||||||||||||||  |||||||| |||||||||| ||    
T  29977883 aagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactt 29977982  T
Q  210 tctct 214  Q
    |||||    
T  29977983 tctct 29977987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 19670820 - 19670714
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    |||||||| |||||||||| ||||| |||| ||||||||||||| ||||||| |||| |||||||||||| || | ||  ||||||||||||||| |||     
T  19670820 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 19670721  T
Q  208 tttctct 214  Q
    |||||||    
T  19670720 tttctct 19670714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 41823920 - 41823984
Alignment:
Q  150 cctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  41823920 cctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctct 41823984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 40574779 - 40574881
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | |||| ||| |||||||||||||||||||||| ||||||||||||||  |  || |||| |||| ||||||||| ||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttc 40574878  T
Q  212 tct 214  Q
    |||    
T  40574879 tct 40574881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 53352660 - 53352564
Alignment:
Q  117 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||||||||||| |||| || |||||||  |||| ||||| ||| |||||||||||||||||| | |||||||||||||||||| | |||||||    
T  53352660 atgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctct 53352564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 48647796 - 48647724
Alignment:
Q  142 caatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||||  || |||||||||||||||||| |||||| ||||||||||| ||||||||||||| |||||||    
T  48647796 caatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttctct 48647724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 55475189 - 55475293
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||||||| ||| | |||| |||||||||||||||||||||||||| |||||||||||| || | ||  ||||||| ||| ||| ||| ||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactt 55475288  T
Q  210 tctct 214  Q
    |||||    
T  55475289 tctct 55475293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 47986207 - 47986310
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||| ||||| |||| |||||||||| || |||||| ||||| |||||||||||| || | ||  ||||||||||||||| ||| |||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  211 ctct 214  Q
    ||||    
T  47986307 ctct 47986310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 50813993 - 50813890
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||| ||||  |||| ||| ||||||||| |||||||||||| |||||||||||| || ||||  || |||||||||||| ||| |||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  211 ctct 214  Q
    ||||    
T  50813893 ctct 50813890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 17983821 - 17983741
Alignment:
Q  134 ttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||| |||||||    
T  17983821 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 17983741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 32766956 - 32767060
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||||||| ||||  |||| ||||||||||||| |||||||||| | |||||||||||| || | ||  ||||||| ||||||| ||| ||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactt 32767055  T
Q  210 tctct 214  Q
    |||||    
T  32767056 tctct 32767060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 8343263 - 8343177
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgca 198  Q
    |||| |||||||||| ||| | |||| |||||||||| ||||||||||| |||||||||||||||| || | ||  |||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgca 8343177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 29548061 - 29547994
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgaca 177  Q
    |||||| |||||||||| ||| | |||| |||||||||| || |||||||||||| ||||||||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgaca 29547994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 44536846 - 44536744
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||| |||| ||||| ||||||||||||| |||||| ||||| |||||||||||| || ||||  | |||||| || ||| ||| |||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacaccc-ttgacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacacttt 44536748  T
Q  211 ctct 214  Q
    ||||    
T  44536747 ctct 44536744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 28480369 - 28480267
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| || ||||||||||| | |||| || ||||||||   || |||| |||| |||||||||||| ||||||| ||||||||| ||||| |||| |||    
T  28480369 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28480270  T
Q  211 ctc 213  Q
    |||    
T  28480269 ctc 28480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 28481244 - 28481142
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| || ||||||||||| | |||| || ||||||||   || |||| |||| |||||||||||| ||||||| ||||||||| ||||| |||| |||    
T  28481244 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28481145  T
Q  211 ctc 213  Q
    |||    
T  28481144 ctc 28481142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 28482119 - 28482017
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| || ||||||||||| | |||| || ||||||||   || |||| |||| |||||||||||| ||||||| ||||||||| ||||| |||| |||    
T  28482119 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28482020  T
Q  211 ctc 213  Q
    |||    
T  28482019 ctc 28482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 47104542 - 47104612
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgt 180  Q
    ||||||||||||| |||||||   ||||||| |||||||| || ||||||||||| |||||| ||||||||    
T  47104542 aagagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgt 47104612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 55079814 - 55079749
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgaca 177  Q
    |||| |||||||||| ||||| |||| ||||||||||||  |||||||||| | ||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgaca 55079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 18769141 - 18769211
Alignment:
Q  144 atacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||||||| | ||||||||| ||||||||||||||| |||| ||  ||||| |||||  |||||||||||    
T  18769141 atacaccctctaacacccacacaaaaatctgacacgtggtcatgtaaaccccacacaaatacattttctct 18769211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 29589831 - 29589738
Alignment:
Q  120 atacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||||| ||||| |||| || |||||||||| |||||||||||| |||||||||| | || | ||  |||||||| |||||| ||| |||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctct 29589738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 8080485 - 8080381
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  210 tctct 214  Q
    |||||    
T  8080385 tctct 8080381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 7389387 - 7389491
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  210 tctct 214  Q
    |||||    
T  7389487 tctct 7389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 36362014 - 36361911
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  211 ctct 214  Q
    ||||    
T  36361914 ctct 36361911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 4999614 - 4999512
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| ||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  212 tct 214  Q
    |||    
T  4999514 tct 4999512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 38267040 - 38267142
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||  || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  212 tct 214  Q
    |||    
T  38267140 tct 38267142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 38837213 - 38837319
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||||||||||||     
T  38837213 aaaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 38837312  T
Q  208 tttctct 214  Q
    |||||||    
T  38837313 tttctct 38837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 3434561 - 3434664
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||| | |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  211 ctct 214  Q
    ||||    
T  3434661 ctct 3434664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 35137528 - 35137635
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||| ||||||||||| ||||||||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  35137528 aaaatgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T
Q  207 ttttctct 214  Q
     |||||||    
T  35137628 ctttctct 35137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 36362025 - 36362128
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  211 ctct 214  Q
    ||||    
T  36362125 ctct 36362128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 19329842 - 19329944
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||| | |||| |||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  212 tct 214  Q
    |||    
T  19329942 tct 19329944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 115 - 214
Target Start/End: Original strand, 3783998 - 3784097
Alignment:
Q  115 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||||||||||||| |||| |||||||||| | ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 40957704 - 40957809
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatt 208  Q
    |||||||||||||||||||||||  |||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||||| |||| ||||||||| |    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T
Q  209 ttctct 214  Q
    ||||||    
T  40957804 ttctct 40957809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 19436289 - 19436185
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||||||| | |||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||| ||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  210 tctct 214  Q
    |||||    
T  19436189 tctct 19436185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 32951592 - 32951491
Alignment:
Q  113 agtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttct 212  Q
    |||||||||||||||||||  ||||||| ||||||| ||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  213 ct 214  Q
    ||    
T  32951492 ct 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 21234401 - 21234503
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | |||| || |||||||||||||||||| |||| |||||| |||||||||| ||| || |||||||||||||||||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  212 tct 214  Q
    |||    
T  21234501 tct 21234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 8238207 - 8238315
Alignment:
Q  107 aaaaagagtaatgatacatagacacctt-tagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcac 205  Q
    |||| |||| |||||||||| ||||| | ||| |||||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||| ||    
T  8238207 aaaatgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtac 8238306  T
Q  206 attttctct 214  Q
    | |||||||    
T  8238307 actttctct 8238315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 36208171 - 36208275
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||||||||||||| |||| ||| ||||||  | |||||||||||| ||||| |||||| || ||||||||||||| ||||||||||||||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  210 tctct 214  Q
    |||||    
T  36208271 tctct 36208275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 115 - 214
Target Start/End: Original strand, 3694370 - 3694469
Alignment:
Q  115 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||| ||| ||||| |||| || ||||||||| ||| ||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 46033902 - 46033799
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||||| |   |||| |||||||||||||||| ||||||||||||||||||||||||| ||||| || || ||||||||||| |||||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatatttt 46033803  T
Q  211 ctct 214  Q
    ||||    
T  46033802 ctct 46033799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 46374902 - 46374807
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    |||| |||||||||||||| | |||| |||||| ||||||||| ||||||||| ||||||||||||||| | ||| ||||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacat 46374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 38044195 - 38044299
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||||||| ||||| |||| ||||||||||||| |||||| ||||| |||||||||||| |||| ||  ||||||||||||||| ||| ||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactt 38044294  T
Q  210 tctct 214  Q
    |||||    
T  38044295 tctct 38044299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 35468960 - 35468853
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||||||||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||| | | ||   || |||||||| |||||| ||||    
T  35468960 aaaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacaca 35468861  T
Q  207 ttttctct 214  Q
     |||||||    
T  35468860 ctttctct 35468853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 11044185 - 11044280
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatt 208  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||          ||||||||||||||||||||||||||||||| ||| |    
T  11044185 aaagagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaagtacact 11044274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 22343360 - 22343463
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| ||   ||  ||||||||||||||| ||| |||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  211 ctct 214  Q
    ||||    
T  22343460 ctct 22343463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 26296643 - 26296746
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||||||| | |||| || ||||| ||||||| ||| |||||||||||||||| |||| | ||  |||||||||||||||| ||||||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcatttt 26296742  T
Q  211 ctct 214  Q
    ||||    
T  26296743 ctct 26296746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 41915740 - 41915843
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||| ||||| |||| ||||||||||||| |||||||| ||| |||||||||||| || | ||  ||||||||||||||| ||| |||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 41915839  T
Q  211 ctct 214  Q
    ||||    
T  41915840 ctct 41915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 7727900 - 7728006
Alignment:
Q  106 caaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcac 205  Q
    |||||||||| |||||||||| ||||| |||| ||| ||||||||  ||||||  ||||||||||||||||| || ||||  ||||||||||||||| ||    
T  7727900 caaaaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtac 7727999  T
Q  206 attttct 212  Q
    | |||||    
T  7728000 actttct 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 18207176 - 18207281
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    |||||||| |||||||||||||| | |||| ||||||||||||  |||||||||| | |||||||| |||||| | |||||| ||||| ||||||||||     
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcacac 18207274  T
Q  208 tttctct 214  Q
    |||||||    
T  18207275 tttctct 18207281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 35522881 - 35522978
Alignment:
Q  117 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||||||||| | |||  |||||||||||| ||| ||||||||| ||||||||||||||| | ||  |||| |||||||||||||| |||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctct 35522978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 41423682 - 41423784
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | |||||||| ||||||||  |||||||  ||| |||||||||||| || ||||||| || |||| ||||||| ||||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  212 tct 214  Q
    |||    
T  41423782 tct 41423784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 10343666 - 10343597
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacac 178  Q
    |||||||||||||||||||||||| |||| ||| |||||||   |||||||||||| |||||||||||||    
T  10343666 aaagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 39256023 - 39255922
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | |||| ||||||||||||  |||| ||||| | ||||||||||||||| | ||||||||| || |||||| ||| ||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaagaacactttc 39255925  T
Q  212 tct 214  Q
    |||    
T  39255924 tct 39255922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 40846213 - 40846111
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||| ||| | |||| ||||||||||||| |||||| ||||| |||||||| ||| ||||| |  ||||||||||||||  ||| ||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  212 tct 214  Q
    |||    
T  40846113 tct 40846111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 27744375 - 27744307
Alignment:
Q  146 acaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||||||||| ||||||| |||||||||||| || | |||||||| ||| || |||||||||||||||    
T  27744375 acaccctttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctct 27744307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 32564526 - 32564424
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||| |||   |||| ||||||||||||| |||||||||||| |||||||||||| || |  |  ||||||||||||||  ||| ||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  212 tct 214  Q
    |||    
T  32564426 tct 32564424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 16374894 - 16374830
Alignment:
Q  142 caatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||| || |||||| ||||| ||||||||||||||| |||||||||| | | ||||||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcaca 16374830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 26898337 - 26898398
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaa 201  Q
    |||||||||||| ||| |||||||||||||| |||||||||| || || |||||||| |||||    
T  26898337 tggcaatacacctttt-acacccacataaaattctgacacgtggtaacctggaccccacacaa 26898398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 44326343 - 44326303
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgt 180  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  44326343 tggcaatacacccttt-acacccacataaaattctgacacgt 44326303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 31735884 - 31735936
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccaca 164  Q
    |||| |||||||||||||| | |||| ||||||||||| |||| |||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccaca 31735936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 18520989 - 18520882
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18520989 aaaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T
Q  207 ttttctct 214  Q
     |||||||    
T  18520889 ctttctct 18520882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 14831808 - 14831914
Alignment:
Q  106 caaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcac 205  Q
    ||||| ||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14831808 caaaatgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcac 14831907  T
Q  206 attttct 212  Q
    | |||||    
T  14831908 actttct 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 36733044 - 36732940
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  210 tctct 214  Q
    |||||    
T  36732944 tctct 36732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 2740273 - 2740376
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  211 ctct 214  Q
    ||||    
T  2740373 ctct 2740376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 13811648 - 13811754
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    |||||||||| |||||||||||||| |||| |||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  13811648 aaaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 13811747  T
Q  208 tttctct 214  Q
    |||||||    
T  13811748 tttctct 13811754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 40145407 - 40145509
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  212 tct 214  Q
    |||    
T  40145507 tct 40145509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 33149738 - 33149636
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  212 tct 214  Q
    |||    
T  33149638 tct 33149636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 42414402 - 42414308
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 42414308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 6679697 - 6679800
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||| ||||||||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  211 ctct 214  Q
    ||||    
T  6679797 ctct 6679800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 35785199 - 35785301
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||| ||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  212 tct 214  Q
    |||    
T  35785299 tct 35785301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 28177775 - 28177877
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||| |||| ||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  212 tct 214  Q
    |||    
T  28177875 tct 28177877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 35943992 - 35943890
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||||| |||| |||||||||| | ||||||||||||| |||||||||||||||||| ||||||| ||| |||||||||| ||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  212 tct 214  Q
    |||    
T  35943892 tct 35943890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 41470517 - 41470425
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagc 203  Q
    |||||||| |||||||||||||||||| |||||||||| ||||| | |  || ||||||||||||||||||||||||||||||||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 15409712 - 15409616
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||||| |||||||||||||| | |||| || |||||||  |||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 26720516 - 26720618
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | |||| |||||||||||||||| ||||| ||| ||||||||||||||| | ||| |||| |||||||||||||| ||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  212 tct 214  Q
    |||    
T  26720616 tct 26720618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 26990265 - 26990367
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | |||| |||||||||||||||| ||||| ||| ||||||||||||||| | ||| |||| |||||||||||||| ||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  212 tct 214  Q
    |||    
T  26990365 tct 26990367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 3921368 - 3921263
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatt 208  Q
    ||||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||| |    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 3921269  T
Q  209 ttctct 214  Q
    ||||||    
T  3921268 ttctct 3921263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 20073616 - 20073516
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||| ||||||| | ||||||| |||||||||||||||||| |||||||||||||  |||||   ||||||||||| ||||||||||| ||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  212 t 212  Q
    |    
T  20073516 t 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 31008984 - 31009088
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    |||||||| |||||||||| ||| | |||| || |||||||  |||  ||||||||| |||||||||||||||||||||||||| ||||||||||||||     
T  31008984 aaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 31009083  T
Q  208 tttct 212  Q
    |||||    
T  31009084 tttct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 36875708 - 36875610
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||         |||||||||||| ||||||||||||||    
T  36875708 aaaaaaagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaa---------tagtcacgtggatcccgcacaagcaca 36875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 2252269 - 2252166
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||| ||| | |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||| |||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  211 ctct 214  Q
    ||||    
T  2252169 ctct 2252166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 33825424 - 33825322
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||||||||| ||||||||   |||| ||||||||||| | ||||||||||||||||||||||||||||  ||| ||| |||   |||||||||| ||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  212 tct 214  Q
    |||    
T  33825324 tct 33825322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 21370048 - 21370106
Alignment:
Q  156 acacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||||||  |||||||||||| || |||||||||||||||||||| ||||||||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctct 21370106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 16327902 - 16327995
Alignment:
Q  113 agtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||||||||| ||| | | | |||| |||||||||| || ||||||||||||||||||||||||||||  ||| ||| ||| | ||||||||||    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcaca 16327995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 31132392 - 31132436
Alignment:
Q  160 ccacataaaaatctgacacgtagtcacgtggaccccgcacaagca 204  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagca 31132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 39688999 - 39688895
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||||||| ||||| |||  |||||||||| || |||||||||||| |||||||||| | || ||||  || |||||||| ||| ||| ||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  210 tctct 214  Q
    |||||    
T  39688899 tctct 39688895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 6260101 - 6259999
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||| ||| |  ||| || ||||||||||||| ||||||||  |||||||| |||| | ||||| |||||| | || ||||||| ||||    
T  6260101 gagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacactttc 6260002  T
Q  212 tct 214  Q
    |||    
T  6260001 tct 6259999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 10356639 - 10356698
Alignment:
Q  117 atgatacatagacacctttagatggcaataca-ccctttgacacccacataaaaatctga 175  Q
    |||||||||||||| | |||| |||||||||| ||| |||||||||||| ||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 25831334 - 25831387
Alignment:
Q  161 cacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||| |||||||| |||||| |||| ||||||||| ||||| ||||||||||||    
T  25831334 cacaaaaaaatctaacacgtggtcatgtggaccccacacaaacacattttctct 25831387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 9603811 - 9603915
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||| ||| | |||| ||  ||||||| | || ||||| ||| ||||||||||||| | ||||  ||||||||  |||| |||| ||    
T  9603811 aagagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactt 9603910  T
Q  210 tctct 214  Q
    |||||    
T  9603911 tctct 9603915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 38296200 - 38296304
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatt 208  Q
    ||||||| |||||||||||||    |||| || |||||||||  || | ||||||| ||||||| |||||||||  ||||||| ||  |||||||||| |    
T  38296200 aaagagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacact 38296299  T
Q  209 ttctc 213  Q
    |||||    
T  38296300 ttctc 38296304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 7465836 - 7465733
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  211 ctct 214  Q
    ||||    
T  7465736 ctct 7465733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 17473020 - 17473122
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  212 tct 214  Q
    |||    
T  17473120 tct 17473122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 33436204 - 33436098
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||     
T  33436204 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacac 33436105  T
Q  208 tttctct 214  Q
    |||||||    
T  33436104 tttctct 33436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 9058478 - 9058582
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  210 tctct 214  Q
    |||||    
T  9058578 tctct 9058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 30915461 - 30915565
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  210 tctct 214  Q
    |||||    
T  30915561 tctct 30915565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 5574589 - 5574486
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  211 ctct 214  Q
    ||||    
T  5574489 ctct 5574486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 115 - 214
Target Start/End: Original strand, 28863458 - 28863557
Alignment:
Q  115 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 10249484 - 10249380
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||||||||| |||| || ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  210 tctct 214  Q
    |||||    
T  10249384 tctct 10249380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 13438343 - 13438445
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  212 tct 214  Q
    |||    
T  13438443 tct 13438445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||||| |||| || ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  211 ct 212  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 40701478 - 40701580
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||| ||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  212 tct 214  Q
    |||    
T  40701578 tct 40701580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 115 - 214
Target Start/End: Complemental strand, 19930917 - 19930818
Alignment:
Q  115 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||||||||||||| |||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 20700811 - 20700917
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    ||||||||||||||||||||||| | |||  ||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| |||||||     
T  20700811 aaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacac 20700910  T
Q  208 tttctct 214  Q
    |||||||    
T  20700911 tttctct 20700917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 27864704 - 27864806
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| ||||||| ||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  212 tct 214  Q
    |||    
T  27864804 tct 27864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 28381755 - 28381653
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| |||||||||||| || |||||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  212 tct 214  Q
    |||    
T  28381655 tct 28381653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 42257189 - 42257295
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    |||||||| |||||||||||||| |||||| |||||||||| | ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||     
T  42257189 aaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacac 42257288  T
Q  208 tttctct 214  Q
    |||||||    
T  42257289 tttctct 42257295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 38273246 - 38273140
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    |||||||| ||||||||||||||   ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| |||||||||||| ||||||     
T  38273246 aaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacac 38273147  T
Q  208 tttctct 214  Q
    |||||||    
T  38273146 tttctct 38273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 40614002 - 40613900
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||||| ||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  212 tct 214  Q
    |||    
T  40613902 tct 40613900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 38882916 - 38882831
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggacccc 195  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccc 38882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 26891607 - 26891502
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatt 208  Q
    ||||||| ||||||||||| |||| |||| ||||||||||||| | |||||||||| |||||||||||| || |||||||||||| || |||||||||||    
T  26891607 aaagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacatt 26891508  T
Q  209 ttctct 214  Q
    ||||||    
T  26891507 ttctct 26891502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 4060685 - 4060785
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| || ||||||||| ||||||| ||||| |||||||||||||||||| ||||||| |||||| ||||||| ||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  212 t 212  Q
    |    
T  4060785 t 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 33436210 - 33436313
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||   || ||||||   ||||||||||| |||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacacttt 33436309  T
Q  211 ctct 214  Q
    ||||    
T  33436310 ctct 33436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 17820104 - 17820002
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| || ||| ||||||||||||| |||||||||||| |||||||||||| || || ||||||||||| ||||| |||||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  212 tct 214  Q
    |||    
T  17820004 tct 17820002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 214
Target Start/End: Original strand, 3439985 - 3440081
Alignment:
Q  118 tgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||| |||||||| |||| ||||||||||| | | |||||||||| |||||||| ||| ||  | ||||||||||||||||||||||||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctct 3440081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 2533123 - 2533217
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||| |||||||||||||| | |||  |||||||||| ||||||||||| ||| ||||||||||||||||| ||| | |||||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcaca 2533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 36168835 - 36168938
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||||||| | ||||||| ||||||| ||||| || |||||| |||||| |||||||| | ||| ||||||||||||||||| | |||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  211 ctct 214  Q
    ||||    
T  36168935 ctct 36168938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 41575138 - 41575240
Alignment:
Q  113 agtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggacccc-gcacaagcacattttc 211  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||  |||| |||||| ||||| || |||| |||||||||  |||||||||| ||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttc 41575237  T
Q  212 tct 214  Q
    |||    
T  41575238 tct 41575240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 45097840 - 45097733
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||||| |||||||||| ||| | |||| |||||||||| || |||||||||| | |||||||||||| || | ||  ||||||||||||||| |||    
T  45097840 aaaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtaca 45097741  T
Q  207 ttttctct 214  Q
     |||||||    
T  45097740 ctttctct 45097733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 13365346 - 13365455
Alignment:
Q  107 aaaaagagtaatgatacatagacac--ctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagca 204  Q
    ||||||||| |||||||||| ||||  | ||||||||||||| |||| |||||||||||| |||||||||||| ||   ||  ||||||||||||||| |    
T  13365346 aaaaagagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagta 13365445  T
Q  205 cattttctct 214  Q
    || |||||||    
T  13365446 cactttctct 13365455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 38732354 - 38732456
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||| ||||| |||  || ||||||| || |||||||||||| |||||||||||| || ||||  ||||||||||||||| ||| ||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  212 tct 214  Q
    |||    
T  38732454 tct 38732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 43490121 - 43490211
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaag 202  Q
    |||| |||||||||| ||||| |||| || |||||||||| |||||||||||| |||||||||||| || | ||  |||||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 43490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 3737986 - 3738043
Alignment:
Q  155 gacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttct 212  Q
    |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttct 3738043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 2997565 - 2997485
Alignment:
Q  134 ttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||| |||||||    
T  2997565 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 2997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 17823782 - 17823853
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgta 181  Q
    ||||||||||||||||| ||| | |||| ||||||||||  | |  ||||||||| ||||||||||||||||    
T  17823782 aagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgta 17823853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 8e-42; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 53982011 - 53982113
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  212 tct 214  Q
    |||    
T  53982111 tct 53982113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 27714993 - 27714889
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  210 tctct 214  Q
    |||||    
T  27714893 tctct 27714889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 33644200 - 33644302
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  212 tct 214  Q
    |||    
T  33644300 tct 33644302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 49607410 - 49607516
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||     
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 49607509  T
Q  208 tttctct 214  Q
    |||||||    
T  49607510 tttctct 49607516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 17470404 - 17470507
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| |||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  211 ctct 214  Q
    ||||    
T  17470504 ctct 17470507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 52629305 - 52629402
Alignment:
Q  117 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 52629402  T

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Target: chr3; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 54868997 - 54868893
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||| ||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  210 tctct 214  Q
    |||||    
T  54868897 tctct 54868893  T

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Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 31456684 - 31456791
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||| ||||||||||||||||||||  |||  ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  31456684 aaaaaaagtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T
Q  207 ttttctct 214  Q
     |||||||    
T  31456784 ctttctct 31456791  T

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Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 8076393 - 8076495
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||| ||||| |||| ||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  212 tct 214  Q
    |||    
T  8076493 tct 8076495  T

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Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 48587187 - 48587089
Alignment:
Q  116 aatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctct 48587089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 11095455 - 11095353
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| || |||| ||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacactt 11095358  T
Q  210 tctct 214  Q
    |||||    
T  11095357 tctct 11095353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 9562998 - 9563101
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||| ||||| ||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||||||| || |||||| |||| |||    
T  9562998 agagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacacttt 9563097  T
Q  211 ctct 214  Q
    ||||    
T  9563098 ctct 9563101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 26141632 - 26141530
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | |||| |||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  212 tct 214  Q
    |||    
T  26141532 tct 26141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 26754700 - 26754797
Alignment:
Q  117 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||| |||||||||| |||| ||||||||||||||| |||| ||||| |||||||||||| || ||||| |||||||||||||||||||||||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 33118953 - 33118849
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||||||||||||| |||| || ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| || || |||| ||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactt 33118854  T
Q  210 tctct 214  Q
    |||||    
T  33118853 tctct 33118849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 24700055 - 24699952
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||| ||||| | ||||||||||| | |||| |||| |||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  211 ctct 214  Q
    ||||    
T  24699955 ctct 24699952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 14623939 - 14623837
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||| | |||| ||||||||||||| ||||||||||||||||||||||||| ||  ||| ||||||| | |||||||||| ||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  212 tct 214  Q
    |||    
T  14623839 tct 14623837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 36707527 - 36707439
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgc 197  Q
    |||||||||||||||||||| ||| |||| || ||||||||||||||||| ||||| |||||||||||||||||| ||||||| |||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 41189866 - 41189762
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||||||| ||| | |||| |||||||||| | |||||||||||||||||||| |||||||| | ||| ||||||||||||||||||| ||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  210 tctct 214  Q
    |||||    
T  41189766 tctct 41189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 30801829 - 30801731
Alignment:
Q  116 aatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||||||||||||||| |||| ||  |||||||||||||| ||||||| |||||| ||||| |||||||  |||||||| ||||||||||||||||||    
T  30801829 aatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctct 30801731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 51419460 - 51419358
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||| ||||||||||||||| | ||| | ||||||||||||||||| ||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  212 tct 214  Q
    |||    
T  51419360 tct 51419358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 13898154 - 13898053
Alignment:
Q  113 agtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttct 212  Q
    |||||||||| ||| ||| | |||| ||||||||||||| ||||||||||||||||||||||||||||  ||| ||||||| | |||||||||| |||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttct 13898055  T
Q  213 ct 214  Q
    ||    
T  13898054 ct 13898053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 35536625 - 35536720
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||||||||||||||||||| | |||  |||||||||||| |||||||||||||||||||| |||||||| |||| |||||||   ||||||||||    
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcaca 35536720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 11348026 - 11347920
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    |||||||| |||||||||||||| | |||| || ||||||| ||||||||| ||||| ||||||||||||||| | ||| ||||||| ||| |||||||     
T  11348026 aaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacac 11347927  T
Q  208 tttctct 214  Q
    |||||||    
T  11347926 tttctct 11347920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 11907369 - 11907473
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||||||||||||| |||| || |||||||| | |  |||| |||| |||||||||||| || ||||  ||||||||||||||||||||||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattt 11907468  T
Q  210 tctct 214  Q
    |||||    
T  11907469 tctct 11907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 8956761 - 8956856
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||||||||||||||||||| | |||  |||||||||| |||||||||||||||||||||| ||||||||  ||| |||||||   ||||||||||    
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcaca 8956856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 20765015 - 20764913
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||| ||||||||| | |||| ||| ||||||| |||| ||||||||| ||||||||||||||| | ||| ||||||||| ||||||||| ||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  212 tct 214  Q
    |||    
T  20764915 tct 20764913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 47531865 - 47531967
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | ||||||||||||||||| ||| ||| ||||| || |||||||||||| | ||  || |||||||||||||||| ||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  212 tct 214  Q
    |||    
T  47531965 tct 47531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 41080709 - 41080809
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||| | |||| | |||| ||||||||||||||||||  |||||||||| | || |||| ||||| ||| |||||||||||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttc 41080806  T
Q  212 tct 214  Q
    |||    
T  41080807 tct 41080809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 45058652 - 45058563
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaag 202  Q
    |||| |||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||   ||  |||||||||||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaag 45058563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 48375807 - 48375704
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| ||||| |||||||||| |||| || |||||||||| |  | | ||| | |||||||||||  || ||||| |||||||||||||||||||||||    
T  48375807 agagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacatttt 48375708  T
Q  211 ctct 214  Q
    ||||    
T  48375707 ctct 48375704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 35965876 - 35965806
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgt 180  Q
    ||||||||||||||||| ||| | |||  ||  |||||| |||||||||||||||||||||||||||||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgt 35965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 36331407 - 36331327
Alignment:
Q  134 ttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||| ||||||| ||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||| |||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 36331327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 36331479 - 36331416
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctg 174  Q
    ||||| |||||||||| ||||| |||||||||||| ||||| |||||| ||||| |||||||||    
T  36331479 agagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctg 36331416  T

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Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 42823116 - 42823197
Alignment:
Q  117 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgca 198  Q
    |||||||||| ||||| |||  ||| ||||||||| |||||||||||| |||||| ||||| || ||||  |||||||||||    
T  42823116 atgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgca 42823197  T

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Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 35093583 - 35093687
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| | |||||||||||| |||||| || ||||||| | ||||||| ||||  |||||||||||| || |||| ||| || ||  ||||||||| ||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactt 35093682  T
Q  210 tctct 214  Q
    |||||    
T  35093683 tctct 35093687  T

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Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 1758560 - 1758454
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccct--ttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    |||||| ||||||||||| || |  ||| | |||||||||||   |||||||||||| ||||||||||||  | || |||||||| || ||||| |||||    
T  1758560 aagagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacacat 1758461  T
Q  208 tttctct 214  Q
    |||||||    
T  1758460 tttctct 1758454  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 43745773 - 43745825
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtgga 191  Q
    ||||||||||| |||||||| |||| ||||||| ||||||||  |||||||||    
T  43745773 tggcaatacactctttgacatccacgtaaaaatttgacacgtcatcacgtgga 43745825  T

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Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 12831047 - 12831149
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  212 tct 214  Q
    |||    
T  12831147 tct 12831149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 15197333 - 15197435
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  212 tct 214  Q
    |||    
T  15197433 tct 15197435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 37038478 - 37038579
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  211 ct 212  Q
    ||    
T  37038578 ct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 14547920 - 14548024
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||||| |||||||||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  14547920 aagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 14548019  T
Q  210 tctct 214  Q
    |||||    
T  14548020 tctct 14548024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 504226 - 504127
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||| ||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  504226 aaaatgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 23122697 - 23122595
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||  |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  212 tct 214  Q
    |||    
T  23122597 tct 23122595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 34012396 - 34012294
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  212 tct 214  Q
    |||    
T  34012296 tct 34012294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 40424043 - 40423941
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  212 tct 214  Q
    |||    
T  40423943 tct 40423941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 5957825 - 5957932
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||| ||||||||||||||||||   |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  5957825 aaaaaaagtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T
Q  207 ttttctct 214  Q
     |||||||    
T  5957925 ctttctct 5957932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 1180040 - 1179938
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||| ||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  212 tct 214  Q
    |||    
T  1179940 tct 1179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 10284734 - 10284629
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatt 208  Q
    ||||||| |||||||||||||||| |||  || |||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T
Q  209 ttctct 214  Q
    ||||||    
T  10284634 ttctct 10284629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 44507188 - 44507085
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    |||||||||||||||||||||| |||| ||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| | |||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatacttt 44507089  T
Q  211 ctct 214  Q
    ||||    
T  44507088 ctct 44507085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 43414686 - 43414579
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||| |||| |||||||||||||| | ||||||||||| ||||||||||||||||||| |||||||| |||||| ||||| |||| ||||||||||||||    
T  43414686 aaaatgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T
Q  207 ttttctct 214  Q
     |||||||    
T  43414586 ctttctct 43414579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 15048281 - 15048180
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||||||| | |||| |||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  212 tct 214  Q
    |||    
T  15048182 tct 15048180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 8841510 - 8841430
Alignment:
Q  134 ttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||| ||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  8841510 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 15259031 - 15258927
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||||||||| ||  ||||||||||||||| || | |||| |||||||||||||||||| || ||||||||||||| ||||||||||||||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  210 tctct 214  Q
    |||||    
T  15258931 tctct 15258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 10621182 - 10621085
Alignment:
Q  117 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||||||||| | |||| ||| |||||||||||||||||||||| ||||||||||||||||| ||| | || |||||||||||||| |||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctct 10621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 4854965 - 4854861
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||||||| | |||| |||||||||||||||| ||||| |||||||||||||| | || | ||| ||||||| ||||||||||| ||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  210 tctct 214  Q
    |||||    
T  4854865 tctct 4854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 16383372 - 16383479
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| |||    
T  16383372 aaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtaca 16383471  T
Q  207 ttttctct 214  Q
     |||||||    
T  16383472 ctttctct 16383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 20075034 - 20074966
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgt 180  Q
    ||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||||| ||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgt 20074966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 34307214 - 34307318
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  || |||||||||||| ||| ||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactt 34307313  T
Q  210 tctct 214  Q
    |||||    
T  34307314 tctct 34307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 30479579 - 30479472
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||| |||| |||||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||||| || |  |  |||||| |||||||| |||    
T  30479579 aaaaggagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtaca 30479480  T
Q  207 ttttctct 214  Q
     |||||||    
T  30479479 ctttctct 30479472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 24307895 - 24307791
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||||||| ||||| |||| |||||||||| || |||||||||||| |||||||||| | || | ||  ||||||||||||||| ||| ||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactt 24307796  T
Q  210 tctct 214  Q
    |||||    
T  24307795 tctct 24307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 9122229 - 9122287
Alignment:
Q  156 acacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctct 9122287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 24307624 - 24307692
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctga 175  Q
    ||||||||| |||||||||| ||||| |||| |||||||||| || |||||||||||| ||||||||||    
T  24307624 aaaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 42221513 - 42221617
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    ||||||||||||||||| ||| | |||| || |||||||  | | |||||||||| |||||||||||||||| |||  ||||||||  ||||||||| ||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  210 tctct 214  Q
    |||||    
T  42221613 tctct 42221617  T

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Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 195
Target Start/End: Complemental strand, 14055692 - 14055609
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggacccc 195  Q
    |||| ||||||||| |||||| |||| || |||||||| | |||||| ||||| |||||||| ||| |||||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

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Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 16056506 - 16056399
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||||| |||||||||| ||| | |||  || ||||||| || |||||||||||| |||||||||||| || | ||  ||||||||||||||| |||    
T  16056506 aaaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtaca 16056407  T
Q  207 ttttctct 214  Q
     |||||||    
T  16056406 ctttctct 16056399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 17443824 - 17443927
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||||||| | |||| || ||||||||   || |||| |||| |||||||||||| ||||||| ||||||||| |||||  ||| |||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacacttt 17443923  T
Q  211 ctct 214  Q
    ||||    
T  17443924 ctct 17443927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 38229470 - 38229530
Alignment:
Q  154 tgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||||||||| |||||||||||| || ||||||||||  | | |||||||||||||||||    
T  38229470 tgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttctct 38229530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 32032724 - 32032826
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||| ||||| |||| |||||||||| |||| |||| ||||| |||||||||||| || | ||  |||| || ||||||| ||| |||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  211 ctct 214  Q
    ||||    
T  32032823 ctct 32032826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 151
Target Start/End: Original strand, 9122196 - 9122234
Alignment:
Q  113 agtaatgatacatagacacctttagatggcaatacaccc 151  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  9122196 agtaatgatacatagacacccttaggtggcaatacaccc 9122234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 29705527 - 29705466
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaa 201  Q
    |||||||||||||||| ||||||||| |||| |||||||||| |  || ||||||||||||||    
T  29705527 tggcaatacacccttt-acacccacacaaaattctgacacgtggcaacttggaccccgcacaa 29705466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 20148925 - 20148885
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgt 180  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  20148925 tggcaatacacccttt-acacccacataaaattctgacacgt 20148885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 32869678 - 32869780
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||||| |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32869777  T
Q  212 tct 214  Q
    |||    
T  32869778 tct 32869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 115 - 214
Target Start/End: Complemental strand, 22880755 - 22880656
Alignment:
Q  115 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 17598549 - 17598656
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    |||| ||||||||||||||||||||| |||| |||||||||| | ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  17598549 aaaatgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T
Q  207 ttttctct 214  Q
     |||||||    
T  17598649 ctttctct 17598656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 29857827 - 29857929
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||| ||||||| |||||| ||||||| ||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  212 tct 214  Q
    |||    
T  29857927 tct 29857929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 11427615 - 11427720
Alignment:
Q  111 agagtaatgatacatagacacctt--tagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatt 208  Q
    |||||||||||||||||||||| |  ||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 11427714  T
Q  209 ttctct 214  Q
    ||||||    
T  11427715 ttctct 11427720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 6209568 - 6209463
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatt 208  Q
    |||||||||||||||||||||||| |||| |||||||||||  |||||||| |||| ||||||||| |||||||||||||||||||||||| |||||| |    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T
Q  209 ttctct 214  Q
    ||||||    
T  6209468 ttctct 6209463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 15832573 - 15832679
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    |||||||||||||||||||||||||||||| || ||||| | | ||||||||||||| |||||| ||||||||||||||||||| || ||||||  ||||    
T  15832573 aaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacat 15832672  T
Q  208 tttctct 214  Q
    |||||||    
T  15832673 tttctct 15832679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 23128231 - 23128125
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    |||||| |||||||| |||||||||||||  ||  |||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||     
T  23128231 aaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 23128132  T
Q  208 tttctct 214  Q
    |||||||    
T  23128131 tttctct 23128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 31109500 - 31109398
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||  ||||||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||| ||| ||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttc 31109401  T
Q  212 tct 214  Q
    |||    
T  31109400 tct 31109398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 31976247 - 31976350
Alignment:
Q  111 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatttt 210  Q
    ||||| |||||||||||||| | |||| |||||||| ||||||| ||||||||| ||||||||||||||| ||||| || |||||||||||||||| |||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  211 ctct 214  Q
    ||||    
T  31976347 ctct 31976350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 31110863 - 31110759
Alignment:
Q  108 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacat 207  Q
    |||||||| |||||||||||||| | |||| ||||||||||||||||||||| |||  ||||||||||||||||  ||| ||||||| |||||||||||     
T  31110863 aaaagagttatgatacatagacatccttaggtggcaatacaccctttgacactcac--aaaaatctgacacgtaaccacatggaccctgcacaagcacac 31110766  T
Q  208 tttctct 214  Q
    |||||||    
T  31110765 tttctct 31110759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 30341463 - 30341358
Alignment:
Q  109 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacatt 208  Q
    ||||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||| |    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 30341364  T
Q  209 ttctct 214  Q
    ||||||    
T  30341363 ttctct 30341358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 15990144 - 15990040
Alignment:
Q  110 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattt 209  Q
    |||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||| ||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  210 tctct 214  Q
    |||||    
T  15990044 tctct 15990040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 15508124 - 15508022
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||| ||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  212 tct 214  Q
    |||    
T  15508024 tct 15508022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 31953130 - 31953028
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||| ||||||| | |||| ||||||||||||| ||||||||||||||||||||||||| ||  ||| ||||||| | ||||| |||| ||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  212 tct 214  Q
    |||    
T  31953030 tct 31953028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 28536582 - 28536486
Alignment:
Q  116 aatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||||||||| ||| | |||| |||||||||| || |||||||||||| ||||||||||||||  |||| ||||||||| |||||||||| |||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacactttctct 28536486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 4231548 - 4231650
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| ||||| |||| ||| | |||| ||||||||||||| ||| |||||||| ||||||||||||||| | ||  ||||||||||||||| ||| ||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  212 tct 214  Q
    |||    
T  4231648 tct 4231650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 946371 - 946478
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||| ||||| |||||||||||| | |||| ||  |||||||||||||||||| ||  ||||||||||||| |||||||||  | ||||| | ||||||    
T  946371 aaaaaaagtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcaca 946470  T
Q  207 ttttctct 214  Q
     |||||||    
T  946471 ctttctct 946478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 12732477 - 12732584
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||||||||||||||||||||   |||  |||||||| |  | |||||||||||| ||||||||||||||| |  | ||||| ||| || |||||||    
T  12732477 aaaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcaca 12732576  T
Q  207 ttttctct 214  Q
    ||||||||    
T  12732577 ttttctct 12732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 30870058 - 30870116
Alignment:
Q  156 acacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||||| |||||||||| ||| || ||||| |||||||||||||||||||||||||||    
T  30870058 acacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctct 30870116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 9379807 - 9379710
Alignment:
Q  117 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||||||||| | ||||||| ||||||| || |||||||||| | |||||| |||||||| | || ||||| | | ||||| ||||||||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctct 9379710  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 3213565 - 3213525
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgt 180  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  3213565 tggcaatacacccttt-acacccacataaaattctgacacgt 3213525  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 21293612 - 21293652
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgt 180  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  21293612 tggcaatacacccttt-acacccacataaaattctgacacgt 21293652  T

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Target: scaffold0321 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 10214 - 10107
Alignment:
Q  107 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 206  Q
    ||||||||| ||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||| || |||||||||    
T  10214 aaaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcaca 10115  T
Q  207 ttttctct 214  Q
     |||||||    
T  10114 ctttctct 10107  T

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Target: scaffold0237 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 4029 - 4131
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||| ||||||| |||||| ||||||| ||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  212 tct 214  Q
    |||    
T  4129 tct 4131  T

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Target: scaffold1268 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||| ||||| ||||| |||||||||||||||||| | |||||||||||||| ||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  212 tct 214  Q
    |||    
T  929 tct 927  T

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Target: scaffold1267 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||| ||||| ||||| |||||||||||||||||| | |||||||||||||| ||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  212 tct 214  Q
    |||    
T  929 tct 927  T

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Target: scaffold0316 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 17083 - 17156
Alignment:
Q  141 gcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    |||||||| || | |||| ||||| |||||||||||| || ||||| |||||||||||||||||||||||||||    
T  17083 gcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 17156  T

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Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 8963 - 8861
Alignment:
Q  112 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttc 211  Q
    |||| |||||| ||||||| | |||  || ||||||||  ||||||| | ||| |||||| |||||| |||||||||||||||| |||||| ||||||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttc 8864  T
Q  212 tct 214  Q
    |||    
T  8863 tct 8861  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 152525 - 152600
Alignment:
Q  139 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacattttctct 214  Q
    ||||||||||||| |||||||||||| |||||||||||| || ||||  |||| |||||||||  ||| |||||||    
T  152525 tggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctct 152600  T

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