View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18273_low_32 (Length: 237)

Name: NF18273_low_32
Description: NF18273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18273_low_32
NF18273_low_32
[»] chr4 (38 HSPs)
chr4 (123-221)||(17492668-17492766)
chr4 (122-221)||(24505508-24505608)
chr4 (123-221)||(1615538-1615636)
chr4 (123-221)||(48080014-48080112)
chr4 (128-221)||(2806137-2806230)
chr4 (125-221)||(13848875-13848971)
chr4 (123-221)||(11260710-11260799)
chr4 (123-221)||(42185274-42185371)
chr4 (123-221)||(43447165-43447262)
chr4 (167-221)||(31152704-31152758)
chr4 (116-221)||(1613184-1613288)
chr4 (123-219)||(29821050-29821145)
chr4 (121-221)||(37164015-37164113)
chr4 (169-221)||(48380518-48380570)
chr4 (166-221)||(47834110-47834165)
chr4 (167-221)||(3708296-3708350)
chr4 (167-221)||(10384891-10384945)
chr4 (167-221)||(28914411-28914465)
chr4 (167-221)||(33394120-33394174)
chr4 (167-221)||(39171001-39171055)
chr4 (167-221)||(43047430-43047484)
chr4 (167-221)||(46608256-46608310)
chr4 (147-221)||(1981347-1981421)
chr4 (174-221)||(53987746-53987793)
chr4 (167-221)||(1377546-1377600)
chr4 (167-221)||(4271980-4272034)
chr4 (167-221)||(8525382-8525436)
chr4 (167-221)||(31657322-31657376)
chr4 (167-221)||(37667740-37667794)
chr4 (167-221)||(55631841-55631895)
chr4 (122-221)||(40411574-40411673)
chr4 (166-221)||(39260394-39260449)
chr4 (167-214)||(39332803-39332850)
chr4 (167-210)||(48336405-48336448)
chr4 (167-221)||(6520478-6520532)
chr4 (167-221)||(28909806-28909860)
chr4 (185-218)||(48336648-48336681)
chr4 (169-221)||(39195535-39195587)
[»] chr5 (44 HSPs)
chr5 (123-221)||(41410913-41411010)
chr5 (123-221)||(1831064-1831161)
chr5 (123-221)||(40316531-40316628)
chr5 (123-221)||(30352038-30352136)
chr5 (123-221)||(14639682-14639780)
chr5 (123-210)||(40365869-40365956)
chr5 (123-221)||(26802068-26802165)
chr5 (123-221)||(26809618-26809715)
chr5 (123-221)||(26824645-26824742)
chr5 (123-221)||(40797039-40797136)
chr5 (123-221)||(27674216-27674314)
chr5 (123-221)||(30788205-30788302)
chr5 (123-221)||(13548213-13548310)
chr5 (167-221)||(1098218-1098272)
chr5 (167-221)||(20022903-20022957)
chr5 (167-221)||(20040382-20040436)
chr5 (123-221)||(33402558-33402655)
chr5 (167-221)||(41263096-41263150)
chr5 (123-221)||(39925203-39925301)
chr5 (167-221)||(1781112-1781166)
chr5 (167-221)||(14633050-14633104)
chr5 (167-221)||(19344666-19344720)
chr5 (167-221)||(30211708-30211762)
chr5 (166-221)||(20503015-20503070)
chr5 (118-217)||(32110643-32110741)
chr5 (167-221)||(8627178-8627232)
chr5 (167-221)||(14057751-14057805)
chr5 (167-221)||(30721652-30721706)
chr5 (167-221)||(31191144-31191198)
chr5 (167-221)||(40080024-40080078)
chr5 (167-221)||(40316861-40316915)
chr5 (167-221)||(41410626-41410680)
chr5 (185-221)||(5985000-5985036)
chr5 (167-219)||(14607526-14607578)
chr5 (167-221)||(2799674-2799729)
chr5 (166-221)||(32473989-32474044)
chr5 (167-221)||(2551594-2551648)
chr5 (167-221)||(9936855-9936909)
chr5 (123-221)||(10465262-10465359)
chr5 (183-221)||(27477705-27477743)
chr5 (167-221)||(27675583-27675637)
chr5 (183-221)||(28142987-28143025)
chr5 (121-221)||(34169827-34169926)
chr5 (185-221)||(39104246-39104282)
[»] scaffold0172 (1 HSPs)
scaffold0172 (121-221)||(19702-19802)
[»] chr7 (30 HSPs)
chr7 (122-221)||(29247625-29247724)
chr7 (123-221)||(41844767-41844866)
chr7 (123-221)||(33376775-33376872)
chr7 (166-221)||(9173303-9173358)
chr7 (166-221)||(38850744-38850799)
chr7 (167-221)||(16807113-16807167)
chr7 (167-221)||(31496612-31496666)
chr7 (167-221)||(38069094-38069148)
chr7 (126-221)||(47713399-47713493)
chr7 (167-221)||(25273984-25274038)
chr7 (167-221)||(28016158-28016212)
chr7 (123-221)||(37100993-37101090)
chr7 (167-221)||(48448561-48448615)
chr7 (166-221)||(3124113-3124168)
chr7 (166-217)||(38441855-38441906)
chr7 (130-221)||(40818664-40818754)
chr7 (171-221)||(7314312-7314362)
chr7 (167-221)||(30462188-30462242)
chr7 (167-221)||(35693797-35693851)
chr7 (166-212)||(41007932-41007978)
chr7 (171-221)||(42493564-42493614)
chr7 (170-221)||(4033452-4033503)
chr7 (166-221)||(4620109-4620163)
chr7 (167-221)||(18756642-18756696)
chr7 (183-221)||(26651176-26651214)
chr7 (167-221)||(40231971-40232025)
chr7 (170-219)||(32972296-32972345)
chr7 (167-221)||(46242445-46242501)
chr7 (120-148)||(29247863-29247891)
chr7 (185-221)||(40348571-40348607)
[»] scaffold0195 (1 HSPs)
scaffold0195 (123-221)||(212-310)
[»] chr8 (40 HSPs)
chr8 (123-221)||(29708560-29708658)
chr8 (123-221)||(32909054-32909152)
chr8 (126-221)||(14511842-14511937)
chr8 (1-70)||(5296964-5297033)
chr8 (123-221)||(42150114-42150212)
chr8 (122-221)||(40645608-40645706)
chr8 (123-221)||(20671256-20671353)
chr8 (123-221)||(4960151-4960248)
chr8 (123-221)||(8496850-8496947)
chr8 (167-221)||(25691561-25691615)
chr8 (167-221)||(30464475-30464529)
chr8 (123-221)||(38842162-38842260)
chr8 (123-176)||(38036852-38036905)
chr8 (166-221)||(29917892-29917947)
chr8 (122-221)||(44887679-44887777)
chr8 (123-221)||(14584171-14584268)
chr8 (167-221)||(25009187-25009241)
chr8 (172-221)||(1645370-1645419)
chr8 (168-221)||(43184743-43184796)
chr8 (185-221)||(38036822-38036858)
chr8 (167-210)||(11756819-11756862)
chr8 (146-221)||(43049233-43049307)
chr8 (167-221)||(3466326-3466380)
chr8 (167-221)||(4327083-4327137)
chr8 (183-221)||(13888594-13888632)
chr8 (167-221)||(14378650-14378704)
chr8 (152-218)||(18419027-18419092)
chr8 (167-221)||(21132892-21132946)
chr8 (167-221)||(23437777-23437831)
chr8 (167-221)||(30653403-30653457)
chr8 (167-221)||(37094175-37094229)
chr8 (166-214)||(761592-761640)
chr8 (166-221)||(23547110-23547165)
chr8 (150-221)||(29616290-29616360)
chr8 (151-221)||(2026600-2026669)
chr8 (183-221)||(9615582-9615620)
chr8 (184-221)||(29360900-29360937)
chr8 (185-221)||(7603368-7603404)
chr8 (169-221)||(17523850-17523902)
chr8 (169-221)||(25118831-25118883)
[»] chr6 (26 HSPs)
chr6 (123-221)||(2912896-2912994)
chr6 (121-221)||(16661573-16661672)
chr6 (166-221)||(30699303-30699358)
chr6 (167-221)||(17496289-17496343)
chr6 (167-221)||(24798517-24798571)
chr6 (167-221)||(24825208-24825262)
chr6 (167-221)||(2141611-2141665)
chr6 (167-221)||(2397813-2397867)
chr6 (167-221)||(2656641-2656695)
chr6 (167-221)||(4890097-4890151)
chr6 (167-221)||(6142478-6142532)
chr6 (167-221)||(29514997-29515051)
chr6 (167-221)||(31708936-31708990)
chr6 (167-221)||(32541448-32541502)
chr6 (120-221)||(2667296-2667396)
chr6 (167-221)||(9022883-9022937)
chr6 (167-221)||(10109382-10109436)
chr6 (167-221)||(35117323-35117377)
chr6 (121-221)||(16969375-16969475)
chr6 (166-222)||(13358551-13358607)
chr6 (166-221)||(995605-995660)
chr6 (167-221)||(6188627-6188681)
chr6 (183-221)||(16434602-16434640)
chr6 (185-221)||(12869385-12869421)
chr6 (185-221)||(16120845-16120881)
chr6 (185-221)||(24693199-24693235)
[»] chr3 (47 HSPs)
chr3 (126-221)||(9997842-9997936)
chr3 (123-221)||(10232447-10232544)
chr3 (123-221)||(10107614-10107711)
chr3 (152-221)||(44821491-44821560)
chr3 (123-221)||(10228691-10228788)
chr3 (123-221)||(53019828-53019925)
chr3 (123-221)||(20144884-20144982)
chr3 (162-221)||(12250343-12250400)
chr3 (166-221)||(38833927-38833982)
chr3 (167-221)||(9484639-9484693)
chr3 (167-221)||(12948083-12948137)
chr3 (167-221)||(29455670-29455724)
chr3 (167-221)||(29793340-29793394)
chr3 (167-221)||(34263666-34263720)
chr3 (167-221)||(42098589-42098643)
chr3 (123-221)||(47069406-47069503)
chr3 (167-221)||(49076388-49076442)
chr3 (120-221)||(18013432-18013532)
chr3 (124-221)||(26759480-26759576)
chr3 (169-221)||(34555196-34555248)
chr3 (122-221)||(48927764-48927862)
chr3 (166-221)||(53055587-53055642)
chr3 (167-221)||(901050-901104)
chr3 (167-221)||(4945813-4945867)
chr3 (167-221)||(32961289-32961343)
chr3 (167-221)||(34669651-34669705)
chr3 (167-221)||(50673720-50673774)
chr3 (121-221)||(28958961-28959060)
chr3 (174-221)||(23631554-23631601)
chr3 (123-221)||(2643231-2643328)
chr3 (167-221)||(16434819-16434873)
chr3 (167-221)||(29720438-29720492)
chr3 (167-221)||(36364725-36364779)
chr3 (167-221)||(43370334-43370388)
chr3 (167-221)||(49818800-49818854)
chr3 (167-221)||(50035113-50035167)
chr3 (167-221)||(52094056-52094110)
chr3 (167-221)||(53274957-53275011)
chr3 (185-221)||(54684630-54684666)
chr3 (167-221)||(1778404-1778458)
chr3 (183-221)||(5030048-5030086)
chr3 (171-221)||(21489965-21490015)
chr3 (123-221)||(29809345-29809442)
chr3 (167-221)||(36179098-36179152)
chr3 (167-221)||(46866386-46866440)
chr3 (161-221)||(34680218-34680278)
chr3 (185-221)||(37166543-37166579)
[»] chr2 (27 HSPs)
chr2 (123-221)||(9273353-9273450)
chr2 (126-221)||(1749138-1749232)
chr2 (128-221)||(7601363-7601456)
chr2 (177-221)||(20917893-20917937)
chr2 (166-221)||(41436874-41436929)
chr2 (146-221)||(43328767-43328841)
chr2 (167-221)||(7724577-7724631)
chr2 (167-221)||(8373477-8373531)
chr2 (167-221)||(8896314-8896368)
chr2 (123-221)||(10333544-10333641)
chr2 (167-221)||(12209032-12209086)
chr2 (167-221)||(16126048-16126102)
chr2 (167-221)||(38963838-38963892)
chr2 (124-221)||(16127746-16127842)
chr2 (166-221)||(2831749-2831804)
chr2 (167-221)||(16333523-16333577)
chr2 (123-221)||(22718509-22718606)
chr2 (167-221)||(31603382-31603436)
chr2 (161-221)||(6075162-6075222)
chr2 (161-221)||(16646283-16646343)
chr2 (167-219)||(44022311-44022363)
chr2 (166-217)||(18504514-18504565)
chr2 (166-221)||(45036405-45036460)
chr2 (167-221)||(6730069-6730123)
chr2 (123-221)||(20682654-20682751)
chr2 (123-221)||(41575562-41575659)
chr2 (177-221)||(15177422-15177466)
[»] chr1 (37 HSPs)
chr1 (123-221)||(5117405-5117503)
chr1 (123-221)||(44963643-44963741)
chr1 (123-221)||(26476980-26477078)
chr1 (167-221)||(10100484-10100538)
chr1 (167-221)||(10124152-10124206)
chr1 (167-221)||(26543911-26543965)
chr1 (150-221)||(40058938-40059010)
chr1 (123-221)||(41855692-41855789)
chr1 (150-221)||(23337834-23337904)
chr1 (167-221)||(1821599-1821653)
chr1 (167-221)||(6017420-6017474)
chr1 (167-221)||(7075301-7075355)
chr1 (123-221)||(31932149-31932246)
chr1 (167-221)||(40883454-40883508)
chr1 (167-221)||(45299361-45299415)
chr1 (146-221)||(38786917-38786991)
chr1 (166-221)||(43453136-43453191)
chr1 (166-217)||(44452237-44452288)
chr1 (167-221)||(5606362-5606416)
chr1 (167-221)||(41414246-41414300)
chr1 (167-221)||(44240562-44240616)
chr1 (167-221)||(44741386-44741440)
chr1 (167-221)||(48389109-48389163)
chr1 (167-221)||(49903656-49903710)
chr1 (167-221)||(52749324-52749378)
chr1 (167-221)||(52688572-52688628)
chr1 (121-221)||(50014532-50014631)
chr1 (166-221)||(27581040-27581095)
chr1 (166-221)||(36035728-36035783)
chr1 (166-221)||(47912323-47912378)
chr1 (175-221)||(2139000-2139046)
chr1 (167-221)||(8048719-8048773)
chr1 (171-221)||(27990762-27990812)
chr1 (167-221)||(48312071-48312125)
chr1 (169-213)||(3138649-3138693)
chr1 (185-221)||(31651872-31651908)
chr1 (185-221)||(32495208-32495244)
[»] scaffold0221 (1 HSPs)
scaffold0221 (167-221)||(5419-5473)
[»] scaffold0001 (1 HSPs)
scaffold0001 (167-221)||(184009-184063)
[»] scaffold0500 (1 HSPs)
scaffold0500 (121-221)||(642-741)
[»] scaffold0069 (1 HSPs)
scaffold0069 (167-221)||(4484-4538)
[»] scaffold1248 (1 HSPs)
scaffold1248 (166-221)||(1423-1478)
[»] scaffold0952 (1 HSPs)
scaffold0952 (166-221)||(835-890)
[»] scaffold0281 (1 HSPs)
scaffold0281 (167-221)||(13147-13201)
[»] scaffold0204 (2 HSPs)
scaffold0204 (167-210)||(23927-23970)
scaffold0204 (185-218)||(24170-24203)
[»] scaffold0687 (1 HSPs)
scaffold0687 (185-221)||(1050-1086)


Alignment Details
Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 17492668 - 17492766
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17492668 tactccctccgtcccttaatacttgacccatttggaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 17492766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 24505508 - 24505608
Alignment:
Q  122 gtactccctccgtcccttaatacttgatccatttgaaatatttt-taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaa 220  Q
    |||||||||| |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24505508 gtactccctctgtcccttaatacttgacccatttgaaattttttttaattttgacctaactgactttgactgtatttttcaactaatatacaaagataaa 24505607  T
Q  221 t 221  Q
    |    
T  24505608 t 24505608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 1615538 - 1615636
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||| ||||||||||| |||| |||||| ||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  1615538 tactccctccatcccttaatacgtgattcatttggaatttttttaattttgatctaattgactttgaccgtatttttcaactaatatacaaagataaat 1615636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 48080112 - 48080014
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| ||||||||||||||||| ||||||  ||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||    
T  48080112 tactcccttcgtcccttaatacttgacccatttagaatttttttaattttgatctaactgactttgaccgtatttttcaactgatatacaaaggtaaat 48080014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 2806230 - 2806137
Alignment:
Q  128 cctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| ||||||||||||||||||  ||| ||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  2806230 cctccgtcctttaatacttgatccatttagaatttttttaattttgaactaattaactttgaccgtatttttcaactaatatacaaagataaat 2806137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 13848875 - 13848971
Alignment:
Q  125 ctccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||| ||||||| ||||||||| || |||||||  | |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  13848875 ctccatccgtcctttaatacttaattcatttgatttttttttaattttgacctaactgattttaaccgtatttttcaactaatatacaaagataaat 13848971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 11260710 - 11260799
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||||||||||||||| |||         ||||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  11260710 tactccctccgtcccttaatacttgatccatttggaat---------tttgatctaactaactttgaccgtatttttcaactaatatataaagataaat 11260799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 42185274 - 42185371
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  ||||  |||||||||||||| ||||  ||||||||||||| | | ||||||| |||||||| ||||||||||||||||||||    
T  42185274 tactccctccgtcccgcaatagatgatccatttgaaa-atttgcaattttgacctaatttagtttgaccatatttttctactaatatacaaagataaat 42185371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 43447165 - 43447262
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| |||||  |||||  ||||||| || |  ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  43447165 tactccctccgtcccgtaataaatgatctgtttgaaa-atgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 43447262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 31152704 - 31152758
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  31152704 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 31152758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 1613288 - 1613184
Alignment:
Q  116 tatcaagtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaag 215  Q
    |||| ||| ||| ||||||||| |||||  ||| | |||||||| || | |||||||||||||| | ||||||||| |||||||| ||||||||||||||    
T  1613288 tatctagtcctctctccgtcccgtaatagatgacctatttgaaa-atgtgtaattttgacctaatttactttgaccatatttttctactaatatacaaag 1613190  T
Q  216 ataaat 221  Q
    ||||||    
T  1613189 ataaat 1613184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 29821050 - 29821145
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataa 219  Q
    |||||| | |||||| |||||  |||||||||||||| || |  |||||||| |||||| ||||||||| |||||||| ||||||||||||||||||    
T  29821050 tactcctttcgtcccgtaatagatgatccatttgaaa-atgtgcaattttgatctaacttactttgaccatatttttctactaatatacaaagataa 29821145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 37164015 - 37164113
Alignment:
Q  121 agtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaa 220  Q
    ||||||||||| |||| ||||||  ||| |||||||||| || |  ||||||||||||||| ||||||||  |||||||| |||||||||||||||||||    
T  37164015 agtactccctctgtcc-ttaatagatgacccatttgaaa-atatacaattttgacctaacttactttgactatatttttctactaatatacaaagataaa 37164112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 48380518 - 48380570
Alignment:
Q  169 ttttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  48380518 ttttgacctaacttactttgaccatatttttctactaatatacaaagataaat 48380570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 47834165 - 47834110
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||||    
T  47834165 taattttgacataacttactttgaccatatttttctactaatatacaaagataaat 47834110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 3708296 - 3708350
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  3708296 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaat 3708350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 10384891 - 10384945
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||||    
T  10384891 aattttgacctaacttactttaaccatatttttctactaatatacaaagataaat 10384945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 28914411 - 28914465
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||| ||||||||||    
T  28914411 aattttgacctaacttactttgaccatatttttctactaatatataaagataaat 28914465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 33394120 - 33394174
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||| |||||||||    
T  33394120 aattttgacctaacttactttgaccatatttttctactaatatacgaagataaat 33394174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 39171001 - 39171055
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||    
T  39171001 aattttgacctaacttattttgaccatatttttctactaatatacaaagataaat 39171055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 43047430 - 43047484
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||| |||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  43047430 aattttaacctaacttactttgaccatatttttctactaatatacaaagataaat 43047484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 46608256 - 46608310
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||  ||||||||||||||||||||    
T  46608256 aattttgacctaacttactttgaccatatttttatactaatatacaaagataaat 46608310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 1981421 - 1981347
Alignment:
Q  147 gatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttca-actaatatacaaagataaat 221  Q
    ||||||||||||| |||| ||||||||| |||||| ||||||||| |||||||   ||||||||||||||||||||    
T  1981421 gatccatttgaaa-atttgtaattttgatctaacttactttgaccatattttttttactaatatacaaagataaat 1981347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 53987793 - 53987746
Alignment:
Q  174 acctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  53987793 acctaacttactttgaccatatttttctactaatatacaaagataaat 53987746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 1377546 - 1377600
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| || ||||||||| |||||||| ||||||||||| ||||||||    
T  1377546 aattttgacctatcttactttgaccatatttttctactaatatacatagataaat 1377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 4272034 - 4271980
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| |||||||| ||||||||| | ||||||| ||||||||||    
T  4272034 aattttgacctaacttactttgactgtatttttctattaatatataaagataaat 4271980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 8525436 - 8525382
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||| | |||||||| |||||||||||| |||||||    
T  8525436 aattttgacctaacttactttgatcatatttttctactaatatacaaggataaat 8525382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 31657376 - 31657322
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| || ||||||||| |||||||| ||||||||||| ||||||||    
T  31657376 aattttgacctagcttactttgaccatatttttctactaatatacatagataaat 31657322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 37667794 - 37667740
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | ||||||||| |||||||| | ||||||||||||||||||    
T  37667794 aattttgacctaatttactttgaccatatttttctattaatatacaaagataaat 37667740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 55631895 - 55631841
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| | ||||||| |||||||  ||||||||||||||||||||    
T  55631895 aattttgacctaacttattttgaccatatttttttactaatatacaaagataaat 55631841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 40411673 - 40411574
Alignment:
Q  122 gtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgta-tttttcaactaatatacaaagataaa 220  Q
    |||||||||||||||| |||||  ||| |  ||||||| || |  ||||||||||||||| ||||||||| || |||||  |||||||||||||||||||    
T  40411673 gtactccctccgtcccgtaataaatgacctgtttgaaa-atgtgcaattttgacctaacttactttgaccatattttttttactaatatacaaagataaa 40411575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 39260394 - 39260449
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||| | | ||||||  |||||||| ||||||||||||||||||||    
T  39260394 taattttgacctaatttattttgacaatatttttctactaatatacaaagataaat 39260449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 39332850 - 39332803
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaa 214  Q
    |||||||| |||||| ||||||||| |||||||| |||||||||||||    
T  39332850 aattttgaactaacttactttgaccatatttttctactaatatacaaa 39332803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 48336448 - 48336405
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatata 210  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||    
T  48336448 aattttgacctaacttactttgatcgtatttttctactaatata 48336405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 6520478 - 6520532
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| || ||||||||  |||||||| ||||||||||| ||||||||    
T  6520478 aattttgacctagcttactttgactatatttttctactaatatacatagataaat 6520532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 28909860 - 28909806
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| ||| | ||||||||| |||||||| ||||| ||||||||||||||    
T  28909860 aattttgacttaaattactttgaccatatttttctactaaaatacaaagataaat 28909806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 48336681 - 48336648
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagata 218  Q
    |||||||||||||||| |||||||||||||||||    
T  48336681 tttgaccgtatttttctactaatatacaaagata 48336648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 39195535 - 39195587
Alignment:
Q  169 ttttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| ||  ||||||||| |||||||  ||||||||||||||||||||    
T  39195535 ttttgacctgacatactttgaccatatttttatactaatatacaaagataaat 39195587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 41411010 - 41410913
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41411010 tactccctccgtcccttaatacttgatccatttggaat-tttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 41410913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 1831064 - 1831161
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1831064 tactccctccgtcccttaatacttgatccatttggaat-tttttaattttgacctaactgattttgaccgtatttttcaactaatatacaaagataaat 1831161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 40316531 - 40316628
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40316531 tactccctccgtcccttaatacttgatccatttggaat-tttttaattttgacctaactgattttgaccgtatttttcaactaatatacaaagataaat 40316628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 30352136 - 30352038
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||  ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30352136 tactccctccgtcccttaataagtgacccatttggaatttttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 30352038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 14639780 - 14639682
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||| | ||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14639780 tactccctccatgccttaatacttgacccatttggaatttttttaattttgacctaactaactttgaccgtatttttcaactaatatacaaagataaat 14639682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 40365956 - 40365869
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatata 210  Q
    ||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40365956 tactccctccgtcccttaatatttgacccatttggaatttttttaattttgacctaactaactttgaccgtatttttcaactaatata 40365869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 26802165 - 26802068
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||| ||||||||||||||||||||| | |||| |||| ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  26802165 tacttcctccgtcccttaatacttgacctattt-aaatttttttaattttaacctaaatgactttgaccatatttttcaactaatatacaaagataaat 26802068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 26809715 - 26809618
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||| ||||||||||||||||||||| | |||| |||| ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  26809715 tacttcctccgtcccttaatacttgacctattt-aaatttttttaattttaacctaaatgactttgaccatatttttcaactaatatacaaagataaat 26809618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 26824742 - 26824645
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||| ||||||||||||||||||||| | |||| |||| ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  26824742 tacttcctccgtcccttaatacttgacctattt-aaatttttttaattttaacctaaatgactttgaccatatttttcaactaatatacaaagataaat 26824645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 40797136 - 40797039
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| ||||||||||| ||||| ||||||  ||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  40797136 tactcccttcgtcccttaatgcttgacccatttagaat-tttttaattttgacctaactaactttgatcgtatttttcaactaatatacaaagataaat 40797039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 27674216 - 27674314
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| ||||||| |||| | ||||||| | |||||||||||||  ||| ||||||||| ||||||||| || ||||||||||||||||||    
T  27674216 tactccctccgtctcttaatatttgaccaatttgaattttttttaattttgaattaattgactttgatcgtattttttaattaatatacaaagataaat 27674314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 30788205 - 30788302
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| |||||  ||| |||||||||| || | |||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||||    
T  30788205 tactccctccgtcccgtaatatatgacccatttgaaa-atgtgtaattttgacataacttactttgaccatatttttctactaatatacaaagataaat 30788302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 13548213 - 13548310
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||  ||| |  ||||||| || |  ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  13548213 tactccctccgtcccttaataagtgacctgtttgaaa-atgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 13548310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 1098218 - 1098272
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  1098218 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 1098272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 20022903 - 20022957
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  20022903 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 20022957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 20040436 - 20040382
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  20040436 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 20040382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 33402655 - 33402558
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| |||||  |||||  ||| ||| || | |||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  33402655 tactccctccgtcccgtaatagatgatctgtttaaaa-atgtgtaattttgacctaacttactttgatcatatttttctactaatatacaaagataaat 33402558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 41263150 - 41263096
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  41263150 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 41263096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 39925203 - 39925301
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatt-tttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  ||||  |||||||||||||| |||| ||||||||||| || | ||||||||| |||| ||| | |||||||||||||||||||    
T  39925203 tactccctccgtcccgcaatagatgatccatttgaaa-atttgtaattttgaccaaatttactttgaccatattattttacctaatatacaaagataaat 39925301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 1781166 - 1781112
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||    
T  1781166 aattttgacctaagttactttgaccatatttttctactaatatacaaagataaat 1781112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 14633050 - 14633104
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| || |||||||||||||||||    
T  14633050 aattttgacctaacttactttgaccatatttttctacaaatatacaaagataaat 14633104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 19344720 - 19344666
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||    
T  19344720 aattttgacctaacttattttgaccatatttttctactaatatacaaagataaat 19344666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 30211762 - 30211708
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  30211762 aattttgatctaacttactttgaccatatttttctactaatatacaaagataaat 30211708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 20503070 - 20503015
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| |||| |||| |||||||| || |||||||||||||||||    
T  20503070 taattttgacctaacttacttagaccatatttttctaccaatatacaaagataaat 20503015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 32110741 - 32110643
Alignment:
Q  118 tcaagtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagat 217  Q
    |||| |||||||||||| ||  ||||  | |||||||||||| || |  |||||||| |||| | |||||||||||||||||| ||||||||||||||||    
T  32110741 tcaactactccctccgttccgcaatagataatccatttgaaa-atgtgcaattttgatctaatttactttgaccgtatttttctactaatatacaaagat 32110643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 8627178 - 8627232
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| |||||| ||||||||| |||||||  ||||||||||||||||||||    
T  8627178 aattttgatctaacttactttgaccatatttttttactaatatacaaagataaat 8627232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 14057751 - 14057805
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||    
T  14057751 aattttgacctaacttactttgatcatatttttctattaatatacaaagataaat 14057805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 30721706 - 30721652
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| | ||||||| |||||||| | ||||||||||||||||||    
T  30721706 aattttgacctaacttattttgaccatatttttctattaatatacaaagataaat 30721652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 31191198 - 31191144
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | ||||||||| |||||||| | ||||||||||||||||||    
T  31191198 aattttgacctaatttactttgaccatatttttctattaatatacaaagataaat 31191144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 40080024 - 40080078
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||| |||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  40080024 aattttaacctaacttactttgaccatatttttctactaatatacatagataaat 40080078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 40316861 - 40316915
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | |||| |||| |||||||| ||||||||||||||||||||    
T  40316861 aattttgacctaatttacttcgaccatatttttctactaatatacaaagataaat 40316915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 41410680 - 41410626
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | |||| |||| |||||||| ||||||||||||||||||||    
T  41410680 aattttgacctaatttacttcgaccatatttttctactaatatacaaagataaat 41410626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 5985000 - 5985036
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| ||||||||||||||||||||    
T  5985000 tttgaccgtatttttctactaatatacaaagataaat 5985036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 14607578 - 14607526
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataa 219  Q
    ||||||||||||| | | ||||||| |||||||| ||||||||||||||||||    
T  14607578 aattttgacctaatttaatttgaccatatttttctactaatatacaaagataa 14607526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 2799674 - 2799729
Alignment:
Q  167 aattttgacctaactgactttgaccgta-tttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| |||||||| ||| |||||  ||||||||||||||||||||    
T  2799674 aattttgacctaacttactttgactgtattttttttactaatatacaaagataaat 2799729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 32474044 - 32473989
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||| || ||||| | ||||||| |||||||| ||||||||||||||||||||    
T  32474044 taattttaacataacttattttgaccatatttttctactaatatacaaagataaat 32473989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 2551648 - 2551594
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| | ||| ||| |||||||| ||||||||| ||||||||||    
T  2551648 aattttgacctaacttattttaaccatatttttctactaatatataaagataaat 2551594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 9936909 - 9936855
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| |||| | | ||||||| |||||||| ||||||||||||||||||||    
T  9936909 aattttgatctaatttattttgaccatatttttctactaatatacaaagataaat 9936855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 10465359 - 10465262
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||| ||||  ||||  ||| | |||||||| |||| ||||||||||||| || ||||||||| ||||||||  |||||||||| | ||||||    
T  10465359 tactccctccctcccgcaatagatgacctatttgaaa-atttataattttgacctatcttactttgaccatatttttctgctaatatacatatataaat 10465262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 27477743 - 27477705
Alignment:
Q  183 actttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  27477743 actttgaccgtatttttttactaatatacaaagataaat 27477705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 27675583 - 27675637
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| || ||||||| | |||||||| ||||||||||| ||||||||    
T  27675583 aattttgacctagcttactttgatcatatttttctactaatatacatagataaat 27675637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 28142987 - 28143025
Alignment:
Q  183 actttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  28142987 actttgaccatatttttctactaatatacaaagataaat 28143025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 34169827 - 34169926
Alignment:
Q  121 agtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaa 220  Q
    |||| ||||| ||||||  ||||  ||||| |||||||| ||||  |||||||| |||  | ||||||||| |||||||| ||||||||||| |||||||    
T  34169827 agtattcccttcgtcccgcaatagatgatctatttgaaa-atttgcaattttgatctagtttactttgaccatatttttctactaatatacatagataaa 34169925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 39104282 - 39104246
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  39104282 tttgaccatatttttctactaatatacaaagataaat 39104246  T

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Target: scaffold0172 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 19802 - 19702
Alignment:
Q  121 agtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaa 220  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  19802 agtactccctccgtcccttaatacctgatccatttggaatatttttaattttgacctaattgactttgacagtatttttcaactaatatacaaagataaa 19703  T
Q  221 t 221  Q
    |    
T  19702 t 19702  T

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Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 29247625 - 29247724
Alignment:
Q  122 gtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||| |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29247625 gtactccctccttcccttaatatttgacccatttggaatatttttaattttgacctaactgactttgaccgtattttttaactaatatacaaagataaat 29247724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 41844767 - 41844866
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaa-ttttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||| |||||||||||||||||||||| |||||| ||| ||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  41844767 tacttcctccgtcccttaatacttgattcatttggaatttttttaaattttgacctaactaactttgaccgtattttttaactaatatacaaagataaat 41844866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 33376775 - 33376872
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| |||||  ||||  ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | ||||||||||||| ||||    
T  33376775 tactccctctgtcccgcaatagatgatccatttgaaat-tttttaattttgacctaacttactttgaccgtatttttctattaatatacaaagaaaaat 33376872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 9173358 - 9173303
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  9173358 taattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 9173303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 38850744 - 38850799
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  38850744 taattttgacctaacttactttgaccatatttttccactaatatacaaagataaat 38850799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 16807167 - 16807113
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  16807167 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 16807113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 31496666 - 31496612
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  31496666 aattttgacctaacttactttgaccgtatttttctattaatatacaaagataaat 31496612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 38069094 - 38069148
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  38069094 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 38069148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 47713493 - 47713399
Alignment:
Q  126 tccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||| ||||| |||||  ||| |||||||||| || |  ||||||||||||||| |||||||||||||||||   |||||||||||||||||||    
T  47713493 tccctctgtcccataatagatgacccatttgaaa-atgtgcaattttgacctaacttactttgaccgtatttttttgctaatatacaaagataaat 47713399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 25274038 - 25273984
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| || ||||| ||||||||||||||||||||    
T  25274038 aattttgacctaacttactttgaccataattttctactaatatacaaagataaat 25273984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 28016158 - 28016212
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  28016158 aattttgatctaacttactttgaccatatttttctactaatatacaaagataaat 28016212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 37101090 - 37100993
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  ||||  ||| | |||||||| || | |||||||||||||||| ||||||||| |||||||| | ||||||||||||| ||||    
T  37101090 tactccctccgtcccgcaatagatgacctatttgaaa-atgtgtaattttgacctaacttactttgaccatatttttctattaatatacaaagaaaaat 37100993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 48448561 - 48448615
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||||    
T  48448561 aattttgacctaacttactttaaccatatttttccactaatatacaaagataaat 48448615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 3124168 - 3124113
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| |||| |||||||||| ||||||||| ||||||||||||| ||||||    
T  3124168 taattttgatctaattgactttgactgtatttttctactaatatacaaaaataaat 3124113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 38441855 - 38441906
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagat 217  Q
    ||||||| |||||||| ||||||||| |||||||| ||||||||||||||||    
T  38441855 taatttttacctaacttactttgaccatatttttctactaatatacaaagat 38441906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 221
Target Start/End: Complemental strand, 40818754 - 40818664
Alignment:
Q  130 tccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| |||||  ||||| |||||||| || |  |||||||| |||||| ||| ||||| |||||||| ||||||||||||||||||||    
T  40818754 tccgtcccgtaatagatgatctatttgaaa-atgtgcaattttgatctaacttactctgaccatatttttctactaatatacaaagataaat 40818664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 7314362 - 7314312
Alignment:
Q  171 ttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  7314362 ttgacctaacatactttgaccatatttttctactaatatacaaagataaat 7314312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 30462242 - 30462188
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| ||||| ||||||||| |||||||  ||||||||||||||||||||    
T  30462242 aattttgacttaacttactttgaccatatttttttactaatatacaaagataaat 30462188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 35693851 - 35693797
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| |||| |||| |||||||| ||||||||||||| ||||||    
T  35693851 aattttgacctaacttacttcgaccatatttttctactaatatacaaaaataaat 35693797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 41007978 - 41007932
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatataca 212  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||||    
T  41007978 taattttgacctaacttactttgaccatatttttctactaatataca 41007932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 42493564 - 42493614
Alignment:
Q  171 ttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  42493564 ttgacctaacatactttgaccatatttttctactaatatacaaagataaat 42493614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 4033503 - 4033452
Alignment:
Q  170 tttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| ||  |||||||||||||||||  ||||||||||||||||||||    
T  4033503 tttgacctgacgtactttgaccgtatttttatactaatatacaaagataaat 4033452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 4620109 - 4620163
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| ||||||||| |||||||  | ||||||||||||||||||    
T  4620109 taattttgacctaacttactttgaccatattttt-tattaatatacaaagataaat 4620163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 18756642 - 18756696
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| || ||||||||  |||||||| ||||||||| ||||||||||    
T  18756642 aattttgacctatcttactttgactatatttttctactaatatataaagataaat 18756696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 26651214 - 26651176
Alignment:
Q  183 actttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  26651214 actttgaccatatttttctactaatatacaaagataaat 26651176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 40231971 - 40232025
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | | ||||||| |||||||| ||||||||| ||||||||||    
T  40231971 aattttgacctaatttattttgaccatatttttctactaatatataaagataaat 40232025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 32972345 - 32972296
Alignment:
Q  170 tttgacctaactgactttgaccgtatttttcaactaatatacaaagataa 219  Q
    ||||||||| || ||||||||| |||||||| ||||||||||| ||||||    
T  32972345 tttgacctagcttactttgaccatatttttctactaatatacatagataa 32972296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 46242501 - 46242445
Alignment:
Q  167 aattttgacctaactgactttgaccgta--tttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| ||  |||||  ||||||||||||||||||||    
T  46242501 aattttgacctaacttactttgaccatatttttttttactaatatacaaagataaat 46242445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 29247891 - 29247863
Alignment:
Q  120 aagtactccctccgtcccttaatacttga 148  Q
    |||||||||||||||||||||||||||||    
T  29247891 aagtactccctccgtcccttaatacttga 29247863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 40348607 - 40348571
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  40348607 tttgaccatatttttctactaatatacaaagataaat 40348571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 310 - 212
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  310 tactccctccgtcccttaatacttgacgcatttggaatatttttaattttgacctaactggctttgactgtatttttcaactaatatacaaagataaat 212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 29708560 - 29708658
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||  ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29708560 tactccctccgtcccttaataagtgacccatttggaatttttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 29708658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 32909054 - 32909152
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||| |||||||||||||||||||| ||||||  |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  32909054 tactctctccgtcccttaatacttgacccatttagaatatttttaattttgacctaattaactttgaccgtatttttcaactaatatacaaagataaat 32909152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 14511842 - 14511937
Alignment:
Q  126 tccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| || ||||| |||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  14511842 tccctccgtcccttactatttgattcatttgaaatttttttaattttgacctaactaattttgaccgtatttttcaactaatatacaaagataaat 14511937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5297033 - 5296964
Alignment:
Q  1 cagtgatatgagagacaaaccgaaattattgttggcaaggagaatacaataatgttattgtatgtgattt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5297033 cagtgatatgagagacaaaccgaaattattgttggcaaggagaatacaataatgttattgtatgtgattt 5296964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 42150212 - 42150114
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||  ||||| ||||  ||| ||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||    
T  42150212 tactccctccgtcccttaataagtgatcaatttagaatttttttaattttaacttaactgactttgaccgtatttttcaactaatataaaaagataaat 42150114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 40645608 - 40645706
Alignment:
Q  122 gtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||||  ||||  ||  |||||||||| ||||| ||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  40645608 gtactccctccgtcccgcaatagatggcccatttgaaa-attttcaattttgacctaacttactttgatcatatttttctactaatatacaaagataaat 40645706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 20671256 - 20671353
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| |  ||||  ||||| |||||||| || | |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  20671256 tactccctccgtcgcgcaatagatgatcaatttgaaa-atgtgtaattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 20671353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 4960151 - 4960248
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||| |||||||| |||||  ||||| |||||||| ||||  |||||||||||| || ||||||||| |||||||| ||||||||||| ||||||||    
T  4960151 tactccttccgtcccgtaatagatgatctatttgaaa-atttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaat 4960248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 8496947 - 8496850
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||| ||||||||  ||||| |||| |||||||||| || |  ||||||||||||||| ||||||||| |||||||| || |||||||||||||||||    
T  8496947 tactctctccgtcctgtaatagttgacccatttgaaa-atgtgcaattttgacctaacttactttgaccatatttttctacgaatatacaaagataaat 8496850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 25691615 - 25691561
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  25691615 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 25691561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 30464475 - 30464529
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  30464475 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 30464529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 38842162 - 38842260
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||| |||||||||| |||||  ||| |  ||||||| || | |||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  38842162 tacttcctccgtcccgtaataaatgacctgtttgaaaaatgtgtaattttgacctaacttactttgatcatatttttctactaatatacaaagataaat 38842260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 38036905 - 38036852
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacc 176  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  38036905 tactccctccgtcccttaatacttgacccatttggaatttttttaattttgacc 38036852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 29917947 - 29917892
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||    
T  29917947 taattttgacctaacttattttgaccatatttttctactaatatacaaagataaat 29917892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 44887777 - 44887679
Alignment:
Q  122 gtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||||  ||||  ||||| |||||||| || |  ||||||||||| ||| | ||||||| |||||||| ||||||||||||||||||||    
T  44887777 gtactccctccgtcccgcaataaatgatctatttgaaa-atgtgcaattttgacctgacttagtttgaccatatttttctactaatatacaaagataaat 44887679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 14584268 - 14584171
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| |||||  ||||| |||||||| |||| ||||||||| ||| || ||||||| | |||||||  ||||||||||| ||||||||    
T  14584268 tactccctccgtcccataatagatgatctatttgaaa-atttataattttgatctagcttactttgatcatatttttttactaatatacatagataaat 14584171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 25009187 - 25009241
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||    
T  25009187 aattttgacctaatttactttgaccatatttttctactaatatacaaagataaat 25009241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 1645419 - 1645370
Alignment:
Q  172 tgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  1645419 tgacctaacttactttgaccgtatttttctactaatatacaaaaataaat 1645370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 43184796 - 43184743
Alignment:
Q  168 attttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||    
T  43184796 attttgacctaacttactttgaccatatttttctactaatatacaaaaataaat 43184743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 38036858 - 38036822
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||||||||||||||||||    
T  38036858 tttgaccgtatttttcaactaatatacaaagataaat 38036822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 11756819 - 11756862
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatata 210  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  11756819 aattttgacctaacttactttgaccatatttttcaactaatata 11756862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 43049307 - 43049233
Alignment:
Q  146 tgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||| |||||||| |||| ||||||||| ||| || ||||||||| |||||||| ||||||||||| ||||||||    
T  43049307 tgatctatttgaaa-atttgtaattttgatctagctaactttgaccatatttttctactaatatacatagataaat 43049233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 3466326 - 3466380
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| |||||||   |||||||| ||||||||||||||||||||    
T  3466326 aattttgacctaacttactttgattttatttttctactaatatacaaagataaat 3466380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 4327137 - 4327083
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| |||||| ||||||| | |||||||| ||||||||||||||||||||    
T  4327137 aattttgatctaacttactttgatcatatttttctactaatatacaaagataaat 4327083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 13888632 - 13888594
Alignment:
Q  183 actttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13888632 actttgaccgtatttttctactaatatacaaagataaat 13888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 14378704 - 14378650
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||  |||||||| ||||||||| ||||||||||    
T  14378704 aattttgacctaacttactttgactatatttttctactaatatataaagataaat 14378650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 18419027 - 18419092
Alignment:
Q  152 atttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagata 218  Q
    |||||||| |||| ||||||||||||| || ||||||||| |||||||| ||||||||||| |||||    
T  18419027 atttgaaa-atttgtaattttgacctagcttactttgaccatatttttctactaatatacatagata 18419092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 21132946 - 21132892
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| ||||    
T  21132946 aattttgacttaacttactttgaccatatttttctactaatatacaaagaaaaat 21132892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 23437831 - 23437777
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| |  |||||||| |||||||| ||||||||||||||||||||    
T  23437831 aattttgacctaatttgctttgaccatatttttctactaatatacaaagataaat 23437777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 30653403 - 30653457
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||| | |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  30653403 aattttaatctaacttactttgaccatatttttctactaatatacaaagataaat 30653457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 37094175 - 37094229
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| || ||||||||| |||||||| ||||||||||| ||||||||    
T  37094175 aattttgacctagcttactttgaccatatttttctactaatatacatagataaat 37094229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 761592 - 761640
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaa 214  Q
    |||||||||||||| | ||||||||| |||||||| |||||||||||||    
T  761592 taattttgacctaatttactttgaccatatttttctactaatatacaaa 761640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 23547110 - 23547165
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| |||||| |||||||   |||||||| ||||||||||||||||||||    
T  23547110 taattttgatctaacttactttgataatatttttctactaatatacaaagataaat 23547165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 29616360 - 29616290
Alignment:
Q  150 ccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||| || || |||||||| |||||| ||||||| | ||||| || ||||||||||||||||||||    
T  29616360 ccatttgaaa-atattaaattttgatctaacttactttgatcatatttgtctactaatatacaaagataaat 29616290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 2026600 - 2026669
Alignment:
Q  151 catttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| || |||||||||||||||||| ||||||||  | || ||  ||||||||||||||||||||    
T  2026600 catttgaaa-atgtttaattttgacctaacttactttgactatgttgttttactaatatacaaagataaat 2026669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 9615582 - 9615620
Alignment:
Q  183 actttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  9615582 actttgaccgtatttttttactaatatacaaagataaat 9615620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 29360937 - 29360900
Alignment:
Q  184 ctttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  29360937 ctttgaccgtatttttctactaatatataaagataaat 29360900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 7603368 - 7603404
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  ||||||||||||||||||||    
T  7603368 tttgaccgtatttttatactaatatacaaagataaat 7603404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 17523850 - 17523902
Alignment:
Q  169 ttttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||| |||||||| ||||||| | ||||||||  |||||||||||||||||||    
T  17523850 ttttaacctaacttactttgatcatatttttctgctaatatacaaagataaat 17523902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 25118831 - 25118883
Alignment:
Q  169 ttttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||  | ||||||| | |||||| ||||||||||||||||||||    
T  25118831 ttttgacctaacatattttgaccttctttttctactaatatacaaagataaat 25118883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 2912896 - 2912994
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||  ||| ||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2912896 tactccctccgtcccttaataagtgacccatttagaatttttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 2912994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 16661672 - 16661573
Alignment:
Q  121 agtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaa 220  Q
    ||||||||||| |||||  ||||  |||||||||||||| || | |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||    
T  16661672 agtactccctcagtcccgcaatagatgatccatttgaaa-atgtgtaattttgacctaacttactttgaccgtatttttctactaatatataaagataaa 16661574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 30699303 - 30699358
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  30699303 taattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 30699358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 17496343 - 17496289
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  17496343 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 17496289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 24798571 - 24798517
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  24798571 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 24798517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 24825208 - 24825262
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  24825208 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 24825262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 2141611 - 2141665
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  2141611 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaat 2141665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 2397813 - 2397867
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||    
T  2397813 aattttgacctaatttactttgaccatatttttctactaatatacaaagataaat 2397867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 2656695 - 2656641
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||  |||||||| ||||||||||||||||||||    
T  2656695 aattttgacctaacttactttgactatatttttctactaatatacaaagataaat 2656641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 4890151 - 4890097
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||    
T  4890151 aattttgacctaatttactttgaccatatttttctactaatatacaaagataaat 4890097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 6142532 - 6142478
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  6142532 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaat 6142478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 29515051 - 29514997
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  29515051 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaat 29514997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 31708936 - 31708990
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||    
T  31708936 aattttgacttaatttactttgaccgtatttttctactaatatacaaagataaat 31708990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 32541502 - 32541448
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||    
T  32541502 aattttgacctaatttactttgaccatatttttctactaatatacaaagataaat 32541448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 2667396 - 2667296
Alignment:
Q  120 aagtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataa 219  Q
    ||||||||||||||||||  ||||  |||||  ||||||| || |  ||||||||||||||| ||||||||  |||||||| ||||||| ||||||||||    
T  2667396 aagtactccctccgtcccgcaataaatgatctgtttgaaa-atgtgcaattttgacctaacttactttgactatatttttctactaataaacaaagataa 2667298  T
Q  220 at 221  Q
    ||    
T  2667297 at 2667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 9022883 - 9022937
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||  ||||||||| |||||||| ||||||||||||| ||||||    
T  9022883 aattttgacctaacatactttgaccatatttttctactaatatacaaaaataaat 9022937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 10109436 - 10109382
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||  |||||||| ||||||||||||| ||||||    
T  10109436 aattttgacctaacttactttgactttatttttctactaatatacaaaaataaat 10109382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 35117323 - 35117377
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||| || ||||| ||||||||| |||||||| ||||||||||||||||||||    
T  35117323 aattttaacataacttactttgaccatatttttccactaatatacaaagataaat 35117377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 16969375 - 16969475
Alignment:
Q  121 agtactccctccgtcccttaatacttgatcc-atttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataa 219  Q
    ||||||| |||||||||||||||  ||| || |||||||| || |  ||||||||| ||| | ||||||||| |||||||| ||||||||||||| ||||    
T  16969375 agtactctctccgtcccttaataagtgaccctatttgaaa-atgtgcaattttgacttaatttactttgaccatatttttctactaatatacaaatataa 16969473  T
Q  220 at 221  Q
    ||    
T  16969474 at 16969475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 13358551 - 13358607
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaatt 222  Q
    |||||||||||||||| ||||||||| ||||||   | |||||||||||||||||||    
T  13358551 taattttgacctaacttactttgaccatattttgttattaatatacaaagataaatt 13358607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 995605 - 995660
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||| || | ||||||||  |||||||| ||||||||||||||||||||    
T  995605 taattttgaccaaatttactttgactatatttttctactaatatacaaagataaat 995660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 6188681 - 6188627
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||| | |||||||  ||||||||| ||||||||||    
T  6188681 aattttgacctaacttactttgagcatatttttttactaatatataaagataaat 6188627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 16434602 - 16434640
Alignment:
Q  183 actttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  16434602 actttgaccatatttttccactaatatacaaagataaat 16434640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 12869421 - 12869385
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  12869421 tttgaccatatttttctactaatatacaaagataaat 12869385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 16120881 - 16120845
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  ||||||||||||||||||||    
T  16120881 tttgaccgtatttttttactaatatacaaagataaat 16120845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 24693199 - 24693235
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  24693199 tttgaccatatttttctactaatatacaaagataaat 24693235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 9997936 - 9997842
Alignment:
Q  126 tccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  9997936 tccctccgtcccttaatacttgatctattt-aaatttttttaattttaacctaaatgactttgaccgtatttttcaactaatatacaaagataaat 9997842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 10232544 - 10232447
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||||||| | |||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  10232544 tactccctccgtcccttaatacttgacctattt-aaatttttttaattttaacctaaatgactttgaccgtatttttcaactaatatacaaagataaat 10232447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 10107711 - 10107614
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||||||| | |||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  10107711 tactccctccgtcccttaatacttgacctattt-aaatttttttaattttaacctaaatgactttgaccgtatttttcaactaatatacaaatataaat 10107614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 44821560 - 44821491
Alignment:
Q  152 atttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44821560 atttgaaatttttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 44821491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 10228788 - 10228691
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||| ||||||||||||||||||||| | |||| |||| ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  10228788 tacttcctccgtcccttaatacttgacctattt-aaatttttttaattttaacctaaatgactttgaccatatttttcaactaatatacaaagataaat 10228691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 53019828 - 53019925
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| ||  |||||| |||||||||||||||||| |||||||||||    
T  53019828 tactccttccgtcccttaatactt-atccatttggaatatttttaattttgacctaattggttttgactgtatttttcaactaatatgcaaagataaat 53019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 20144982 - 20144884
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||||||| |  |||  |||||||||| |||| |||||||| |||| ||| |||||||||||||||||||||||||| ||||||||||    
T  20144982 tactccctccgtcccttaacaagtgactcatttgaaattttttaaattttgaactaattgattttgaccgtatttttcaactaatatataaagataaat 20144884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 12250343 - 12250400
Alignment:
Q  162 tttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  12250343 tttttaattttgacctaactgact--gaccgtatttttcaactaatatacaaagataaat 12250400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 38833982 - 38833927
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  38833982 taattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 38833927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 9484639 - 9484693
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  9484639 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 9484693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 12948083 - 12948137
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  12948083 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 12948137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 29455724 - 29455670
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  29455724 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 29455670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 29793394 - 29793340
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  29793394 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 29793340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 34263720 - 34263666
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  34263720 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 34263666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 42098643 - 42098589
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  42098643 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 42098589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 47069406 - 47069503
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  ||||  |||  ||||||||| ||||| ||||||||||||||  |||||||| ||||||||| ||| ||||||||||||||||    
T  47069406 tactccctccgtcccacaatagatgacacatttgaaa-attttcaattttgacctaacctactttgactgtatttttctactgatatacaaagataaat 47069503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 49076442 - 49076388
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  49076442 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 49076388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 18013532 - 18013432
Alignment:
Q  120 aagtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataa 219  Q
    |||||||||||||||||| |||||  ||| |||||||||| || |  ||||||||| ||| | ||||||| | |||||||| ||||||||||||||||||    
T  18013532 aagtactccctccgtcccgtaatagatgacccatttgaaa-atgtgcaattttgacataatttactttgatcatatttttctactaatatacaaagataa 18013434  T
Q  220 at 221  Q
    ||    
T  18013433 at 18013432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 26759480 - 26759576
Alignment:
Q  124 actccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| || | |||||  ||||| |||| ||| |||| |||||||||||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  26759480 actccctccatctcataataaatgatctatttaaaa-atttgtaattttgacctaacttactttgaccatatttttctactaatatacatagataaat 26759576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 34555196 - 34555248
Alignment:
Q  169 ttttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  34555196 ttttgacctaacttactttgaccatatttttctactaatatacaaagataaat 34555248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 48927862 - 48927764
Alignment:
Q  122 gtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||||  ||||  |||||  ||||||| || |  |||||| |||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  48927862 gtactccctccgtcccgcaataaatgatctgtttgaaa-atgtgcaatttttacctaacttactttgaccatatttttctactaatatacaaagataaat 48927764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 53055642 - 53055587
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||    
T  53055642 taattttgacctaactaattttgaccatatttttctactaatatacaaagataaat 53055587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 901104 - 901050
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  901104 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaat 901050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 4945867 - 4945813
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  4945867 aattttgacctaacttactttgaccatatttttctactaatatacatagataaat 4945813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 32961289 - 32961343
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||    
T  32961289 aattttgacctaacttagtttgaccatatttttctactaatatacaaagataaat 32961343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 34669651 - 34669705
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  34669651 aattttgacctaacttactttgatcatatttttctactaatatacaaagataaat 34669705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 50673720 - 50673774
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||||    
T  50673720 aattttgacttaacttactttgaccatatttttctactaatatacaaagataaat 50673774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 28959060 - 28958961
Alignment:
Q  121 agtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaa 220  Q
    ||||||||||||||| |  ||||  ||||| |||| ||| ||||  |||||||||||| || ||||||||| |||||||| ||||||||| |||||||||    
T  28959060 agtactccctccgtctcgcaatagatgatctatttaaaa-atttgcaattttgacctagcttactttgaccatatttttctactaatatataaagataaa 28958962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 23631601 - 23631554
Alignment:
Q  174 acctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||    
T  23631601 acctaacatactttgaccgtatttttctactaatatacaaagataaat 23631554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 2643328 - 2643231
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  ||||  ||| | |||||||| ||||  ||||||||||||  | ||||||||| |||||||| ||||||||||||| ||||||    
T  2643328 tactccctccgtcccgcaatagatgacctatttgaaa-atttgcaattttgacctagtttactttgaccatatttttctactaatatacaaatataaat 2643231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 16434873 - 16434819
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| | ||||||| |||||||  ||||||||||||||||||||    
T  16434873 aattttgacctaacttattttgaccatatttttttactaatatacaaagataaat 16434819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 29720438 - 29720492
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||| ||||||||||    
T  29720438 aattttgacctaacttactttgatcctatttttccactaatatataaagataaat 29720492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 36364779 - 36364725
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| | ||||||| |||||||| ||||||||||| ||||||||    
T  36364779 aattttgacctaacttattttgaccatatttttctactaatatacatagataaat 36364725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 43370334 - 43370388
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| ||||| ||||||| |||||||||  ||||||||||||||||||||    
T  43370334 aattttgacataacttactttgatcgtatttttatactaatatacaaagataaat 43370388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 49818800 - 49818854
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | ||||||||| |||||||| ||||||||||| ||||||||    
T  49818800 aattttgacctaatttactttgaccatatttttctactaatatacatagataaat 49818854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 50035113 - 50035167
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| | |||||  ||||||||||||||||||||    
T  50035113 aattttgacctaacttactttgaccatgtttttatactaatatacaaagataaat 50035167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 52094110 - 52094056
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| |||||| | ||||||| |||||||| ||||||||||||||||||||    
T  52094110 aattttgatctaacttaatttgaccatatttttctactaatatacaaagataaat 52094056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 53275011 - 53274957
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| | ||||| | |||||||| ||||||||||||||||||||    
T  53275011 aattttgacctaacttattttgatcatatttttctactaatatacaaagataaat 53274957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 54684666 - 54684630
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| ||||||||||||||||||||    
T  54684666 tttgaccgtatttttctactaatatacaaagataaat 54684630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 1778404 - 1778458
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| || || ||||||||| |||||||| ||||||||||| ||||||||    
T  1778404 aattttgacttagcttactttgaccatatttttctactaatatacatagataaat 1778458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 5030048 - 5030086
Alignment:
Q  183 actttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  5030048 actttgaccgtacttttctactaatatacaaagataaat 5030086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 21489965 - 21490015
Alignment:
Q  171 ttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||  |||||||||||||||||  | ||||||||||||||||||    
T  21489965 ttgacctaacatactttgaccgtatttttttattaatatacaaagataaat 21490015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 29809345 - 29809442
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  ||||  ||| | |||||||| ||||  |||||||| ||| || |||| |||| |||||||| | ||||||||||||||||||    
T  29809345 tactccctccgtcccgcaatagatgacctatttgaaa-atttgcaattttgatctagcttacttcgaccatatttttctattaatatacaaagataaat 29809442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 36179152 - 36179098
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| ||| | ||||||| | |||||||| ||||||||||||||||||||    
T  36179152 aattttgacttaatttactttgatcatatttttctactaatatacaaagataaat 36179098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 46866386 - 46866440
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| | |||| |  |||||||| ||||||||||||||||||||    
T  46866386 aattttgacctaacttattttggcaatatttttctactaatatacaaagataaat 46866440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 34680218 - 34680278
Alignment:
Q  161 atttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||| ||||||||| |||  | ||||||||| |||||||| ||||||||||| ||||||||    
T  34680218 atttgtaattttgatctagtttactttgaccatatttttctactaatatacatagataaat 34680278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 37166543 - 37166579
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  37166543 tttgaccgtatttttccactaatataaaaagataaat 37166579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 9273353 - 9273450
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||||||| ||||||  |||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9273353 tactccctccgtcccttaa-acttgactcatttggaatttttttaattttgacttaactgactttgaccgtatttttcaactaatatacaaagataaat 9273450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 1749232 - 1749138
Alignment:
Q  126 tccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| | | || ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1749232 tccctccgtcccttaaaagt-gacccatttggaatttttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 1749138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 7601456 - 7601363
Alignment:
Q  128 cctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||| ||| |||||| ||| |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||||||    
T  7601456 cctccgtcccttaatactagattcatttggaatttttttaattttgatttaactgattttgatcgtatttttcaactaatatacaaagataaat 7601363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 20917937 - 20917893
Alignment:
Q  177 taactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20917937 taactgactttgaccgtatttttcaactaatatacaaagataaat 20917893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 41436874 - 41436929
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  41436874 taattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 41436929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 43328841 - 43328767
Alignment:
Q  146 tgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||| || | ||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  43328841 tgatccatttgaaa-atgtataattttgatctaacttactttgaccatatttttctactaatatacaaagataaat 43328767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 7724631 - 7724577
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  7724631 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 7724577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 8373477 - 8373531
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  8373477 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 8373531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 8896314 - 8896368
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  8896314 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 8896368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 10333641 - 10333544
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | |||||  |||||  ||||||| || | |||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||    
T  10333641 tactccctccgtctcgtaataaatgatctgtttgaaa-atgtgtaattttgacctaacttattttgaccatatttttctactaatatacaaagataaat 10333544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 12209032 - 12209086
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  12209032 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 12209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 16126102 - 16126048
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  16126102 aattttgacctaacttactttgaccatatttttccactaatatacaaagataaat 16126048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 38963838 - 38963892
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  38963838 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 38963892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 16127842 - 16127746
Alignment:
Q  124 actccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||  ||||  ||| | |||||||| || | |||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  16127842 actccctccgtcccgcaataaatgacctatttgaaa-atgtgtaattttgacctaacttactttgatcatatttttccactaatatacaaagataaat 16127746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 2831749 - 2831804
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||    
T  2831749 taattttgacctaacttactttgaccatatttttctactaatatacaaatataaat 2831804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 16333523 - 16333577
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||    
T  16333523 aattttgacctaacttactttgaccatatttttccactgatatacaaagataaat 16333577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 22718606 - 22718509
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||| ||||||| | |||||  ||||| |||||||| ||||  |||||||||||| || ||||||||| |||||||| ||||||||| | ||||||||    
T  22718606 tactctctccgtcgcgtaataaatgatctatttgaaa-atttgcaattttgacctagcttactttgaccatatttttctactaatatatatagataaat 22718509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 31603436 - 31603382
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||  |||||||| ||||||||||||| ||||||    
T  31603436 aattttgacctaacttactttgacaatatttttctactaatatacaaatataaat 31603382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 6075162 - 6075222
Alignment:
Q  161 atttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||| ||||||||  ||||| ||||||||| |||||||| | ||||||||||||||||||    
T  6075162 attttcaattttgatttaacttactttgaccatatttttctattaatatacaaagataaat 6075222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 16646283 - 16646343
Alignment:
Q  161 atttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||| ||||||||||||| || ||||||||| |||||||| |||||||| || ||||||||    
T  16646283 atttgtaattttgacctagcttactttgaccatatttttctactaatattcatagataaat 16646343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 44022311 - 44022363
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataa 219  Q
    |||||| |||||||| ||||||||  |||||||| ||||||||||||||||||    
T  44022311 aattttaacctaacttactttgactatatttttctactaatatacaaagataa 44022363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 18504514 - 18504565
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagat 217  Q
    |||||||||| ||||| | ||||||| |||||||| ||||||||||||||||    
T  18504514 taattttgacgtaacttattttgaccatatttttctactaatatacaaagat 18504565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 45036405 - 45036460
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||| ||||| ||  ||||| |||||||| ||||||||||||||||||||    
T  45036405 taattttgacttaacttacgctgaccatatttttctactaatatacaaagataaat 45036460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 6730123 - 6730069
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| || || |||||| |||||||| ||||||||||| ||||||||    
T  6730123 aattttgacctagcttacattgaccatatttttctactaatatacatagataaat 6730069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 20682654 - 20682751
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  |||| |||| | |||| ||| ||||  |||||||||| | || ||||||||  |||||||| ||||||||||| ||||||||    
T  20682654 tactccctccgtcccgcaatagttgacctatttaaaa-atttgcaattttgacccagcttactttgacaatatttttctactaatatacatagataaat 20682751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 41575562 - 41575659
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  ||||  ||| | |||||||| ||||  |||||||||||| || ||||||| | |||||||| ||||||||||| | ||||||    
T  41575562 tactccctccgtcccgcaataaatgacctatttgaaa-atttgcaattttgacctagcttactttgatcatatttttctactaatatacatatataaat 41575659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 15177422 - 15177466
Alignment:
Q  177 taactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||| ||||||||| |||||||  ||||||||||||||||||||    
T  15177422 taacttactttgaccatatttttatactaatatacaaagataaat 15177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 5117503 - 5117405
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||| |||||||||||||||||||||  |||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||    
T  5117503 tacttcctccgtcccttaatacttgactcatttgaaatttttttaattttgatctaattgactttgactgtatttttcaactaatatacaaagataaat 5117405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 44963741 - 44963643
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||| ||||||||||| | ||||  ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44963741 tactccctccgtcctttaatacttgaccaatttagaatttttttaattttgacctaactgattttgaccgtatttttcaactaatatacaaagataaat 44963643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 26477078 - 26476980
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||||||||||||| | |||| |  | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  26477078 tactccctccgtcccttaatacttgaccaatttaatttttttttaattttgacataactgattttgaccgtatttttcaactaatatacaaagataaat 26476980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 10100538 - 10100484
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  10100538 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 10100484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 10124152 - 10124206
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  10124152 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 10124206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 26543911 - 26543965
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  26543911 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 26543965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 40059010 - 40058938
Alignment:
Q  150 ccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaacta--atatacaaagataaat 221  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||  ||||||||||||||||    
T  40059010 ccatttgaaat-tttttaattttgatctaacttactttgaccgtatttttctactaatatatacaaagataaat 40058938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 41855789 - 41855692
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| |||||  ||| | |||||||| ||||  |||||||||||| || ||||||||| |||||||| ||||||||||| ||||||||    
T  41855789 tactccctccgtcccgtaataaatgacctatttgaaa-atttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaat 41855692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 23337834 - 23337904
Alignment:
Q  150 ccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||| |||| ||| |||||||||||| | ||||||| |||||||| ||||||||||||||||||||    
T  23337834 ccatttgaaa-atttgtaaatttgacctaacttagtttgaccatatttttctactaatatacaaagataaat 23337904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 1821653 - 1821599
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| | ||||||||||||||||||    
T  1821653 aattttgacctaacttactttgaccatatttttccattaatatacaaagataaat 1821599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 6017474 - 6017420
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  6017474 aattttgatctaacttactttgaccatatttttctactaatatacaaagataaat 6017420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 7075355 - 7075301
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  7075355 aattttgatctaacttactttgaccatatttttctactaatatacaaagataaat 7075301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 31932246 - 31932149
Alignment:
Q  123 tactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  ||||  ||||| |||||||| ||||  ||||||||||||  | ||||||||| |||||||| ||||||||||||| ||||||    
T  31932246 tactccctccgtcccgcaatagatgatctatttgaaa-atttgcaattttgacctagtttactttgaccatatttttctactaatatacaaatataaat 31932149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 40883454 - 40883508
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||||| ||||||    
T  40883454 aattttgacctaacttactttgatcatatttttcaactaatatacaaatataaat 40883508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 45299361 - 45299415
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||  ||||||||||||||||||||    
T  45299361 aattttgacctaacttactttgaccatatttttatactaatatacaaagataaat 45299415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 38786991 - 38786917
Alignment:
Q  146 tgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||| || |  ||||||||  ||||| ||||||| | |||||||||||||||||||||||||||||    
T  38786991 tgatccatttgaaa-atatgcaattttgatataacttactttgatcatatttttcaactaatatacaaagataaat 38786917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 43453191 - 43453136
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||| | ||||||| |||||||| | ||||||||||||||||||    
T  43453191 taattttgacctaacttattttgaccatatttttctattaatatacaaagataaat 43453136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 44452237 - 44452288
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagat 217  Q
    |||||||||||||||| ||||||||| |||||||| ||||| ||||||||||    
T  44452237 taattttgacctaacttactttgaccatatttttctactaacatacaaagat 44452288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 5606416 - 5606362
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| |||||| ||||| ||| |||||||| ||||||||||||||||||||    
T  5606416 aattttgatctaacttactttaaccatatttttctactaatatacaaagataaat 5606362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 41414246 - 41414300
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| || ||||||||| |||||||| ||||||||||| ||||||||    
T  41414246 aattttgacctagcttactttgaccatatttttctactaatatacatagataaat 41414300  T

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Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 44240562 - 44240616
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| || ||||||||| |||||||| ||||||||||| ||||||||    
T  44240562 aattttgacctagcttactttgaccatatttttctactaatatacatagataaat 44240616  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 44741386 - 44741440
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||| |||||| | ||||||| |||||||| ||||||||||||||||||||    
T  44741386 aattttgatctaacttattttgaccatatttttctactaatatacaaagataaat 44741440  T

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Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 48389109 - 48389163
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| || ||||||||| |||||||| ||||||||||| ||||||||    
T  48389109 aattttgacctagcttactttgaccatatttttctactaatatacatagataaat 48389163  T

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Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 49903710 - 49903656
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||| | ||||||| | |||||||| ||||||||||||||||||||    
T  49903710 aattttgacctaatttactttgatcatatttttctactaatatacaaagataaat 49903656  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 52749324 - 52749378
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||| |||||||| | ||||||| |||||||| ||||||||||||||||||||    
T  52749324 aatttttacctaacttattttgaccatatttttctactaatatacaaagataaat 52749378  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 52688572 - 52688628
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaac--taatatacaaagataaat 221  Q
    ||||||||||||||| |||||||| ||||||||| ||  ||||||||||||||||||    
T  52688572 aattttgacctaacttactttgactgtatttttctactataatatacaaagataaat 52688628  T

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Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 50014631 - 50014532
Alignment:
Q  121 agtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaa 220  Q
    ||||||||||||||||| | |||  |||   |||||||| ||||  |||||||| ||| || ||||||||| |||||||| ||||||||||| |||||||    
T  50014631 agtactccctccgtcccgtcatagatgacttatttgaaa-atttgcaattttgatctagcttactttgaccatatttttctactaatatacatagataaa 50014533  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 27581095 - 27581040
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  ||||||| | |||||||| | ||||||||||||||||||    
T  27581095 taattttgacctaacatactttgatcatatttttctaataatatacaaagataaat 27581040  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 36035728 - 36035783
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||| |||| | ||||||| | |||||||| ||||||||||||||||||||    
T  36035728 taattttgatctaatttactttgatcatatttttctactaatatacaaagataaat 36035783  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 47912323 - 47912378
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||| ||| | | ||||||| |||||||| ||||||||||||||||||||    
T  47912323 taattttgacataatttattttgaccatatttttctactaatatacaaagataaat 47912378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 2139046 - 2139000
Alignment:
Q  175 cctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  2139046 cctaacttactttgatcatatttttctactaatatacaaagataaat 2139000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 8048773 - 8048719
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| || | ||||||| |||||||| ||||||||||| ||||||||    
T  8048773 aattttgacctagcttattttgaccatatttttctactaatatacatagataaat 8048719  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 27990762 - 27990812
Alignment:
Q  171 ttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||  ||||||||| |||||||| ||||||||||||| ||||||    
T  27990762 ttgacctaacatactttgaccatatttttctactaatatacaaaaataaat 27990812  T

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Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 48312071 - 48312125
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||| | ||||| | ||||| |||||||||| ||||||||||||||||||||    
T  48312071 aattttggcttaacttattttgatcgtatttttctactaatatacaaagataaat 48312125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 3138649 - 3138693
Alignment:
Q  169 ttttgacctaactgactttgaccgtatttttcaactaatatacaa 213  Q
    ||||||| ||||| ||||||||| |||||||| ||||||||||||    
T  3138649 ttttgacataacttactttgaccatatttttctactaatatacaa 3138693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 31651908 - 31651872
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  31651908 tttgaccatatttttctactaatatacaaagataaat 31651872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 32495244 - 32495208
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  32495244 tttgaccatatttttcgactaatatacaaagataaat 32495208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 5419 - 5473
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  5419 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 5473  T

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Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 184009 - 184063
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  184009 aattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 184063  T

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Target: scaffold0500 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 741 - 642
Alignment:
Q  121 agtactccctccgtcccttaatacttgatccatttgaaatatttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaa 220  Q
    ||||||||||||| |||  ||||  ||| |||||||||| || |  ||||||||||||||| | ||||||| |||||||| |||||||||||||||||||    
T  741 agtactccctccgccccgcaatagatgacccatttgaaa-atatgcaattttgacctaacttagtttgaccatatttttctactaatatacaaagataaa 643  T

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Target: scaffold0069 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 4484 - 4538
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    ||||||||||||||| | |||||||||||||||| |||||||| |||||||||||    
T  4484 aattttgacctaacttattttgaccgtatttttctactaatatgcaaagataaat 4538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1248 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 1478 - 1423
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||| ||||| ||||||||| |||||||| ||||||||||||| ||||||    
T  1478 taattttgacataacttactttgaccatatttttctactaatatacaaaaataaat 1423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 835 - 890
Alignment:
Q  166 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||| ||||| ||||||||| |||||||| ||||||||||||| ||||||    
T  835 taattttgacataacttactttgaccatatttttctactaatatacaaaaataaat 890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 13147 - 13201
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||| || ||||||||| |||||||| ||||||||||| ||||||||    
T  13147 aattttgacctagcttactttgaccatatttttctactaatatacatagataaat 13201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 23970 - 23927
Alignment:
Q  167 aattttgacctaactgactttgaccgtatttttcaactaatata 210  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||    
T  23970 aattttgacctaacttactttgatcgtatttttctactaatata 23927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 24203 - 24170
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagata 218  Q
    |||||||||||||||| |||||||||||||||||    
T  24203 tttgaccgtatttttctactaatatacaaagata 24170  T

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Target: scaffold0687 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 1050 - 1086
Alignment:
Q  185 tttgaccgtatttttcaactaatatacaaagataaat 221  Q
    |||||||||||||||  ||||||||||||||||||||    
T  1050 tttgaccgtatttttatactaatatacaaagataaat 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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