View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18274_low_1 (Length: 348)
Name: NF18274_low_1
Description: NF18274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18274_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 17 - 336
Target Start/End: Original strand, 25334206 - 25334525
Alignment:
| Q |
17 |
acaaattaattgtcacaatatgaagctaattttcttctaccatagaagttggtttattcaagcaagaatgatgaggtatatatatttcaataagattgga |
116 |
Q |
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| T |
25334206 |
acaaattaattgtcacaatatgaagctaattttcttctaccatagaagttggtttattcaagcaagaataatgaggtatatatatttcaataagattgga |
25334305 |
T |
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| Q |
117 |
tgcaattaaagttagatggatgaaaattgtgttacctaaaattggaaaattgatgtggtggtattaggtcaaacccaattttcatgcaacaactaactaa |
216 |
Q |
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| T |
25334306 |
tgcaattaaagttagatggatgaaaattgtgttacctaaaattggaaaattgatgtggtggtattaggtcaaacccaattttcatgcaacaactaactaa |
25334405 |
T |
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| Q |
217 |
aaatttcctcaaaatgcaagtggtgaatttctttattcatgatgcttgattgtagcaatgagtttgatggtgatgcatgattacatggtggtttctattc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25334406 |
aaatttcctcaaaatgcaagtggtgaatttctttattcatgatgcttgattgtagcaatgagtttgatggtgatgcatgattacatggtggtttctattc |
25334505 |
T |
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| Q |
317 |
gttaatgattaattggtgat |
336 |
Q |
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|||||||||||||||||||| |
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| T |
25334506 |
gttaatgattaattggtgat |
25334525 |
T |
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