View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18275_high_5 (Length: 321)
Name: NF18275_high_5
Description: NF18275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18275_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 40076194 - 40076406
Alignment:
| Q |
19 |
cagacaaaccaaaaattctatcctaagaggtatggtctgcatcactctttagtattgacttcactattacgtttgtgtttatgtcttttcattttcagtc |
118 |
Q |
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| T |
40076194 |
cagacaaaccaaaaattctatcctaagaggtatggtctgcatcactctttagtattgacttcactattacgtttgtgtttatgtcttttcattttcagtc |
40076293 |
T |
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| Q |
119 |
ctatccaaaatttacagaatcaaattcaagtttaattcccctttgtatcatctttcagttgactttcacttttattctatttgattattatcataattgt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40076294 |
ctatccaaaatttacagaatcaaattcaagtttaattcccctttgtatcatctttcagttgactttcacttttattctatttgattattatcataattgt |
40076393 |
T |
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| Q |
219 |
acatcttaatatg |
231 |
Q |
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||||||||||||| |
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| T |
40076394 |
acatcttaatatg |
40076406 |
T |
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