View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18275_high_9 (Length: 247)
Name: NF18275_high_9
Description: NF18275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18275_high_9 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 4 - 247
Target Start/End: Original strand, 31786082 - 31786326
Alignment:
| Q |
4 |
tccaagaaaatcacatcaaataacttttggaagaatgtctttacttgcctgcacttattagtatgacccaaaataatattacatcaa-tgtactaactta |
102 |
Q |
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| T |
31786082 |
tccaaaaaaattatatcaaataacttttggaagaatgtctttacttgcctacacttattagtatgacccaaaataatattacatcaaatgcactaactta |
31786181 |
T |
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| Q |
103 |
gtgaaaaaatacacatgatttctagaaaattaaaatcaaagtgagggctagggcctatactcctatgagagtgggcccgtcgaaatgtagaattgatttt |
202 |
Q |
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| T |
31786182 |
gtgaaaaaatacacatggcctctgaaaaattaaaatcaaagtgagggctagggcctacactcctatgagagtgggtccgtccaaatgtagaattgatttt |
31786281 |
T |
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| Q |
203 |
ctttaaaactataatttatagcttttgtcttttacaaattttaac |
247 |
Q |
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| T |
31786282 |
ctttaaaactataatttatagcttttgtcttttacaaattttaac |
31786326 |
T |
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