View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18276_low_14 (Length: 345)
Name: NF18276_low_14
Description: NF18276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18276_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 36768012 - 36768326
Alignment:
| Q |
1 |
aatgagatattctccataagaaagctaaccttgaaatcaaaagaggtcaaggtaaatatcctgtatcaaaccaattatattattcagctaatgcactcat |
100 |
Q |
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| T |
36768012 |
aatgagatattctccataagaaagctaaccttgaaatcaaaagaggtcaaggtaaatatcctgtatcaaaccaattatattattcagctaatgcactcat |
36768111 |
T |
|
| Q |
101 |
agtgtaaaattcttaatgatggaataatgtaaatactgataagaaactaagcttactcatcaacaaatgtgcaagatttcagtatttgttaatgtgaggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36768112 |
agtgtaaaattcttaatgatggaataatgtaaatactgataagaaactaagcttactcatcaacaaatgtgcaagatttcagtatttgttaatgtgaggg |
36768211 |
T |
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| Q |
201 |
taagtactatatagcatcagcatcagcatcagcctatatatatggtctttgtggtgataacatttgtcctaatatcactgtatcctaacttggaacagta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36768212 |
taagtactatatagcatcagcatcagcatcagcctatatatatggtctttgtggtgataacatttgtcctaatatcactgtatcctaacttggaacagta |
36768311 |
T |
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| Q |
301 |
acgttctcacaggtt |
315 |
Q |
| |
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|||||||||| |||| |
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| T |
36768312 |
acgttctcacgggtt |
36768326 |
T |
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